vhica: Vertical and Horizontal Inheritance Consistence Analysis

The "Vertical and Horizontal Inheritance Consistence Analysis" method is described in the following publication: "VHICA: a new method to discriminate between vertical and horizontal transposon transfer: application to the mariner family within Drosophila" by G. Wallau. et al. (2016) <doi:10.1093/molbev/msv341>. The purpose of the method is to detect horizontal transfers of transposable elements, by contrasting the divergence of transposable element sequences with that of regular genes.

Version: 0.2.8
Suggests: ape, plotrix, parallel, seqinr, gtools
Published: 2023-03-08
DOI: 10.32614/CRAN.package.vhica
Author: Arnaud Le Rouzic
Maintainer: Arnaud Le Rouzic <arnaud.le-rouzic at universite-paris-saclay.fr>
License: GPL-2
NeedsCompilation: no
Materials: README
In views: Omics
CRAN checks: vhica results


Reference manual: vhica.pdf


Package source: vhica_0.2.8.tar.gz
Windows binaries: r-devel: vhica_0.2.8.zip, r-release: vhica_0.2.8.zip, r-oldrel: vhica_0.2.8.zip
macOS binaries: r-release (arm64): vhica_0.2.8.tgz, r-oldrel (arm64): vhica_0.2.8.tgz, r-release (x86_64): vhica_0.2.8.tgz, r-oldrel (x86_64): vhica_0.2.8.tgz
Old sources: vhica archive


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