2013-12-5 Youyi Fong and Krisz Sebestyen * create package 2014-4-1 Youyi Fong * change .C to .Call 2014-7-1 Krisztian Sebestyen * fixed the weighted hamming and ibs kernel code both in R and C (typo in the paper) * separate .Call from native C code in kernels.c/h and matrix.c/h so that C code may be included in other packages without having to include Rinternals.h library (i.e. SEXP stuff) - created files Call_kernels.c and Call_matrix.c - renamed all C functions called via .Call to 'Call_funcname' * updated runit.kernel.R since ibs() has changed * added rrbind(),rcbind(),upper.trap(),lower.trap() to matrix2.R * with .Call I can pass a NULL pointer to C hence I can use more natural 'NULL' logic in C in many functions 2018.07.01 * Add %.% and deprecate %+% because %+% is also defined in ggplot2 for adding a comment to plot * Replace %+% by %.% throughout 2018.10.17 * Modify get.sim.res to handle the case when the file contains a single value * Fix a bug in mytex that happens when saving to the current directory * Make getFormattedSummary more flexible by allowing different paramemters to be printed with different number of significant digits * Update mypairs to generate a ladder plot 2019.01.18 * Fix an error in fixedef.lm 2019.08.02 * Print dir if get.sim.res throws an error due to empty dir 2019.10.14 * Fix a bug in mytex that occurs when writing a list of tables and the row names have duplicates 2019.11.13 * add paired option to myboxplot.list to allow paired Wilcox test 2020.04.11 * Add INT and rank.inv.norm * Enhance cbinduneven so that it works with list of outputs from table() of a single dimension 2020.05.11 * return CI in VEplot as suggested by Betz 2020.06.19 * implement myprint for matrix 2020.08.22 * add marginal.risk 2020.08.26 * add marginal.risk.boot 2020.08.26 * add p.adj.perm 2020.09.02 * add binaryloess 2020.09.16 * change rnorm.cor to rnorm.ar, change function interfact too * make exact suggests not import * fix a bug in formatDouble that drops non-trailing 0s 2020.09.25 * add iorw 2020.10.3 * fix getFixedEf.coxph so that the non-robust p value is correct * add getFixedEf.svycoxph 2020.10.12 * freeze for CoVPN work 2020.11.5 * modify getFormattedSummary 2020.11.16 * update marginal.risk to work with model fits from both lm and svyglm for the marker model 2020.11.19 * add marginal.risk.cat 2020.11.19 * add marginal.risk.cont 2020.11.24 * fix marginal.risk.boot 2020.12.2 * remove marginal.risk functions to a new package 2020.12.24 * add get.kfold.splits 2020.12.29 * update corplot.formula: change main 2020.1.4 * Update getFixedEf 2020.1.11 * Update getFormattedSummary 2020.2.2 * Update mymatplot 2020.2.13 * Update getFormattedSummary 2020.3.9 * Add date to Description 2020.4.13 * Add add.loess to corplot 2020.5.7 * Add support for longtable to mytex 2020.6.16 * Update getFormattedSummary on how p values are reported when it is below a threshold 2021.10.27 * Add split functions 2021.04.05 * Change F77 call to be more portable 2022.07.17 * Add predict.competing.risk 2022.08.02 * Add imaging_spatial_analysis 2022.09.17 * Update manual for predictCompetingRisk 2023.02.02 * Fix typo in ?prc2