fpc: Flexible Procedures for Clustering

Various methods for clustering and cluster validation. Fixed point clustering. Linear regression clustering. Clustering by merging Gaussian mixture components. Symmetric and asymmetric discriminant projections for visualisation of the separation of groupings. Cluster validation statistics for distance based clustering including corrected Rand index. Standardisation of cluster validation statistics by random clusterings and comparison between many clustering methods and numbers of clusters based on this. Cluster-wise cluster stability assessment. Methods for estimation of the number of clusters: Calinski-Harabasz, Tibshirani and Walther's prediction strength, Fang and Wang's bootstrap stability. Gaussian/multinomial mixture fitting for mixed continuous/categorical variables. Variable-wise statistics for cluster interpretation. DBSCAN clustering. Interface functions for many clustering methods implemented in R, including estimating the number of clusters with kmeans, pam and clara. Modality diagnosis for Gaussian mixtures. For an overview see package?fpc.

Version: 2.2-12
Depends: R (≥ 2.0)
Imports: MASS, cluster, mclust, flexmix, prabclus, class, diptest, robustbase, kernlab, grDevices, graphics, methods, stats, utils, parallel
Suggests: tclust, pdfCluster, mvtnorm
Published: 2024-04-30
DOI: 10.32614/CRAN.package.fpc
Author: Christian Hennig
Maintainer: Christian Hennig <christian.hennig at unibo.it>
License: GPL-2 | GPL-3 [expanded from: GPL]
URL: https://www.unibo.it/sitoweb/christian.hennig/en/
NeedsCompilation: no
In views: Cluster
CRAN checks: fpc results


Reference manual: fpc.pdf


Package source: fpc_2.2-12.tar.gz
Windows binaries: r-devel: fpc_2.2-12.zip, r-release: fpc_2.2-12.zip, r-oldrel: fpc_2.2-12.zip
macOS binaries: r-release (arm64): fpc_2.2-12.tgz, r-oldrel (arm64): fpc_2.2-12.tgz, r-release (x86_64): fpc_2.2-12.tgz, r-oldrel (x86_64): fpc_2.2-12.tgz
Old sources: fpc archive

Reverse dependencies:

Reverse depends: evaluomeR, omada, wskm
Reverse imports: adductomicsR, beadplexr, bootcluster, Canek, clusEvol, ClustAll, clusterMI, clustrd, coca, conjoint, dann, DIscBIO, drclust, FADPclust, FuseSOM, ICSClust, immunarch, IPCAPS, Linnorm, lsirm12pl, MEGENA, MineICA, MLInterfaces, mlr3cluster, MMUPHin, NIMAA, nullabor, OMICsPCA, pathfindR, RaceID, robCompositions, RPANDA, sae.prop, scone, semiArtificial, seqArchR, SPARTAAS, stream, truh, tspmeta, uSORT
Reverse suggests: autonomics, ClusBoot, dbscan, dendextend, fdm2id, mlr, MOSS, opticskxi, parameters, rattle, simplifyEnrichment, trimcluster
Reverse enhances: cluster


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