TOmicsVis: Transcriptome Visualization Process Scheme

Transcriptome visualization from sample trait statistics to gene expression analysis. Six categories include "Samples Statistics", "Traits Analysis", "Differential Expression Analysis", "Advanced Analysis", "GO and KEGG Enrichment", "Tables Operations", with complete sample data.

Version: 2.0.0
Depends: R (≥ 3.5), Biobase (≥ 2.5.5), e1071 (≥ 1.7-0)
Imports: stats, utils, grid, graphics, grDevices, ggplot2, ggsci, reshape2, ggpubr, ggcorrplot, ggforce, vegan, venn, UpSetR, circlize, randomcoloR, ComplexHeatmap, EnhancedVolcano, GGally, survival, survminer, Rtsne, umap, dplyr, tidyr, clusterProfiler, enrichplot, ggnewscale, igraph, WGCNA, stringr, pheatmap, RColorBrewer, ggpolypath, factoextra, ggrepel, cowplot, ggplotify, plotrix, Mfuzz, shiny
Suggests: knitr, rmarkdown
Published: 2023-08-28
DOI: 10.32614/CRAN.package.TOmicsVis
Author: Benben Miao ORCID iD [aut, cre], Wei Dong ORCID iD [aut]
Maintainer: Benben Miao <benben.miao at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
CRAN checks: TOmicsVis results


Reference manual: TOmicsVis.pdf
Vignettes: Tutorials


Package source: TOmicsVis_2.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): TOmicsVis_2.0.0.tgz, r-oldrel (arm64): not available, r-release (x86_64): TOmicsVis_2.0.0.tgz, r-oldrel (x86_64): not available
Old sources: TOmicsVis archive


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