PolyHaplotyper: Assignment of Haplotypes Based on SNP Dosages in Diploids and Polyploids

Infer the genetic composition of individuals in terms of haplotype dosages for a haploblock, based on bi-allelic marker dosages, for any ploidy level. Reference: Voorrips and Tumino: PolyHaplotyper: haplotyping in polyploids based on bi-allelic marker dosage data. Submitted to BMC Bioinformatics (2021).

Version: 1.0.1
Imports: XML
Suggests: knitr, rmarkdown
Published: 2021-06-17
Author: Roeland E. Voorrips
Maintainer: Roeland E. Voorrips <roeland.voorrips at wur.nl>
License: GPL-2
NeedsCompilation: no
CRAN checks: PolyHaplotyper results

Downloads:

Reference manual: PolyHaplotyper.pdf
Vignettes: PolyHaplotyper vignette
Package source: PolyHaplotyper_1.0.1.tar.gz
Windows binaries: r-devel: PolyHaplotyper_1.0.1.zip, r-release: PolyHaplotyper_1.0.1.zip, r-oldrel: PolyHaplotyper_1.0.1.zip
macOS binaries: r-release (arm64): PolyHaplotyper_1.0.1.tgz, r-release (x86_64): PolyHaplotyper_1.0.1.tgz, r-oldrel: PolyHaplotyper_1.0.1.tgz
Old sources: PolyHaplotyper archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PolyHaplotyper to link to this page.