CRAN Package Check Results for Package tidyft

Last updated on 2021-07-26 19:49:41 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.5 4.90 53.04 57.94 NOTE
r-devel-linux-x86_64-debian-gcc 0.4.5 3.70 40.50 44.20 NOTE
r-devel-linux-x86_64-fedora-clang 0.4.5 76.43 NOTE
r-devel-linux-x86_64-fedora-gcc 0.4.5 63.53 NOTE
r-devel-windows-x86_64 0.4.5 8.00 71.00 79.00 NOTE
r-devel-windows-x86_64-gcc10-UCRT 0.4.5 NOTE
r-patched-linux-x86_64 0.4.5 4.30 48.77 53.07 NOTE
r-patched-solaris-x86 0.4.5 90.30 WARN
r-release-linux-x86_64 0.4.5 4.53 49.17 53.70 NOTE
r-release-macos-arm64 0.4.5 WARN
r-release-macos-x86_64 0.4.5 WARN
r-release-windows-ix86+x86_64 0.4.5 9.00 65.00 74.00 NOTE
r-oldrel-macos-x86_64 0.4.5 WARN
r-oldrel-windows-ix86+x86_64 0.4.5 8.00 71.00 79.00 OK

Check Details

Version: 0.4.5
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-devel-windows-x86_64-gcc10-UCRT, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.4.5
Check: Rd cross-references
Result: NOTE
    Undeclared packages ‘tidyfst’, ‘tidyr’, ‘fastDummies’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.4.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
     *** caught segfault ***
    address 75636900, cause 'memory not mapped'
    
     *** caught segfault ***
    address 17c40ec8, cause 'memory not mapped'
    
    Traceback:
     1: fstretrieve(file_name, columns, from, to)
     2: read_fst(meta_info$path, j)
     3: `[.fst_table`(ft, logical_vec)
     4: ft[logical_vec]
     5: setDT(ft[logical_vec])
     6: select_fst(., Species, Sepal.Length, Sepal.Width)
     7: is.data.frame(x)
     8: setnames(.data, old = old_names, new = new_names)
     9: rename(., group = Species, sl = Sepal.Length, sw = Sepal.Width)
    10: is.data.frame(x)
    11: setorder(.data, ...)
    12: arrange(., group, sl)
    13: eval(parse(text = str_glue(".data[{dot_string}]")), text = str_glue(".data[{dot_string}]"))
    14: eval(parse(text = str_glue(".data[{dot_string}]")))
    15: filter(., sl > 5)
    16: select_dt(.data[0], ...)
    17: select_dt(.data[0], ...) %>% names()
    18: distinct(., sl, .keep_all = TRUE)
    19: summarise(., sw = max(sw), by = group)
    20: ft %>% select_fst(Species, Sepal.Length, Sepal.Width) %>% rename(group = Species, sl = Sepal.Length, sw = Sepal.Width) %>% arrange(group, sl) %>% filter(sl > 5) %>% distinct(sl, .keep_all = TRUE) %>% summarise(sw = max(sw), by = group)
    21: eval(substitute(expr), envir = parent.frame())
    22: eval(substitute(expr), envir = parent.frame())
    23: sys_time_print({ res = ft %>% select_fst(Species, Sepal.Length, Sepal.Width) %>% rename(group = Species, sl = Sepal.Length, sw = Sepal.Width) %>% arrange(group, sl) %>% filter(sl > 5) %>% distinct(sl, .keep_all = TRUE) %>% summarise(sw = max(sw), by = group)})
    24: eval(expr, envir, enclos)
    25: eval(expr, envir, enclos)
    26: withVisible(eval(expr, envir, enclos))
    27: withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)
    28: handle(ev <- withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler, error = eHandler, message = mHandler))
    29: timing_fn(handle(ev <- withCallingHandlers(withVisible(eval(expr, envir, enclos)), warning = wHandler, error = eHandler, message = mHandler)))
    30: evaluate_call(expr, parsed$src[[i]], envir = envir, enclos = enclos, debug = debug, last = i == length(out), use_try = stop_on_error != 2L, keep_warning = keep_warning, keep_message = keep_message, output_handler = output_handler, include_timing = include_timing)
    31: evaluate::evaluate(...)
    32: evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message), stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options))
    33: in_dir(input_dir(), evaluate(code, envir = env, new_device = FALSE, keep_warning = !isFALSE(options$warning), keep_message = !isFALSE(options$message), stop_on_error = if (is.numeric(options$error)) options$error else { if (options$error && options$include) 0L else 2L }, output_handler = knit_handlers(options$render, options)))
    34: eng_r(options)
    35: block_exec(params)
    36: call_block(x)
    37: process_group.block(group)
    38: process_group(group)
    39: withCallingHandlers(if (tangle) process_tangle(group) else process_group(group), error = function(e) { setwd(wd) cat(res, sep = "\n", file = output %n% "") message("Quitting from lines ", paste(current_lines(i), collapse = "-"), " (", knit_concord$get("infile"), ") ") })
    40: process_file(text, output)
    41: knit(input, text = text, envir = envir, quiet = quiet)
    42: (if (grepl("\\.[Rr]md$", file)) knit2html else if (grepl("\\.[Rr]rst$", file)) knit2pandoc else knit)(file, encoding = encoding, quiet = quiet, envir = globalenv(), ...)
    43: vweave(...)
    44: engine$weave(file, quiet = quiet, encoding = enc)
    45: doTryCatch(return(expr), name, parentenv, handler)
    46: tryCatchOne(expr, names, parentenv, handlers[[1L]])
    47: tryCatchList(expr, classes, parentenv, handlers)
    48: tryCatch({ engine$weave(file, quiet = quiet, encoding = enc) setwd(startdir) output <- find_vignette_product(name, by = "weave", engine = engine) if (!have.makefile && vignette_is_tex(output)) { texi2pdf(file = output, clean = FALSE, quiet = quiet) output <- find_vignette_product(name, by = "texi2pdf", engine = engine) } outputs <- c(outputs, output)}, error = function(e) { thisOK <<- FALSE fails <<- c(fails, file) message(gettextf("Error: processing vignette '%s' failed with diagnostics:\n%s", file, conditionMessage(e)))})
    49: tools:::buildVignettes(dir = "/home/ripley/R/packages/tests32/tidyft.Rcheck/vign_test/tidyft", ser_elibs = "/tmp/RtmpBvaGAm/file18d430f96ca5.rds")
    An irrecoverable exception occurred. R is aborting now ...
    Quitting from lines 92-105 (Introduction.Rmd)
    Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
    bad value
    --- failed re-building ‘Introduction.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.4.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    Quitting from lines 113-154 (Introduction.Rmd)
    Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
    invalid 'path' argument
    --- failed re-building ‘Introduction.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-release-macos-arm64, r-release-macos-x86_64

Version: 0.4.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 113-154 (Introduction.Rmd)
    Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘Introduction.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-macos-x86_64