CRAN Package Check Results for Package phangorn

Last updated on 2024-07-14 06:54:30 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.11.1 69.51 481.00 550.51 NOTE
r-devel-linux-x86_64-debian-gcc 2.11.1 51.12 356.63 407.75 NOTE
r-devel-linux-x86_64-fedora-clang 2.11.1 689.52 NOTE
r-devel-linux-x86_64-fedora-gcc 2.11.1 697.56 NOTE
r-devel-windows-x86_64 2.11.1 60.00 354.00 414.00 NOTE
r-patched-linux-x86_64 2.11.1 67.79 464.84 532.63 NOTE
r-release-linux-x86_64 2.11.1 63.67 466.79 530.46 NOTE
r-release-macos-arm64 2.11.1 175.00 NOTE
r-release-macos-x86_64 2.11.1 290.00 NOTE
r-release-windows-x86_64 2.11.1 60.00 350.00 410.00 NOTE
r-oldrel-macos-arm64 2.11.1 199.00 NOTE
r-oldrel-macos-x86_64 2.11.1 324.00 NOTE
r-oldrel-windows-x86_64 2.11.1 75.00 451.00 526.00 NOTE

Additional issues

noRemap

Check Details

Version: 2.11.1
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.11.1
Check: installed package size
Result: NOTE installed size is 5.1Mb sub-directories of 1Mb or more: doc 1.5Mb libs 1.2Mb Flavors: r-devel-windows-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.11.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: add.tips.Rd: bind.tree addConfidences.Rd: plot.phylo add_ci.Rd: plot.phylo add_edge_length.Rd: node.depth.edgelength, consensus as.phyDat.Rd: read.dna, read.nexus.data as.splits.Rd: prop.part baseFreq.Rd: base.freq bootstrap.pml.Rd: plot.phylo, nodelabels cladePar.Rd: plot.phylo coalSpeciesTree.Rd: speciesTree densiTree.Rd: plot.phylo dna2codon.Rd: trans image.phyDat.Rd: image.DNAbin, image.AAbin maxCladeCred.Rd: consensus, prop.part phyDat.Rd: DNAbin, as.DNAbin, read.dna, read.nexus.data plotBS.Rd: plot.phylo, nodelabels, consensus pml.Rd: plot.phylo pml_bb.Rd: rtt read.nexus.splits.Rd: prop.part upgma.Rd: as.phylo, fastme Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavor: r-devel-windows-x86_64

Version: 2.11.1
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘seqLogo’ Flavor: r-oldrel-macos-arm64

Version: 2.11.1
Check: package dependencies
Result: NOTE Packages suggested but not available for checking: 'Biostrings', 'seqLogo' Flavor: r-oldrel-macos-x86_64