Last updated on 2023-03-31 05:54:30 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 0.34 | 1.93 | 2.27 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 2.29 | 41.76 | 44.05 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 77.99 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 82.16 | OK | |||
| r-devel-windows-x86_64 | 0.1.0 | 15.00 | 0.00 | 15.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.0 | 6.83 | 79.45 | 86.28 | ERROR | |
| r-release-linux-x86_64 | 0.2.0 | 1.82 | 53.07 | 54.89 | OK | |
| r-release-macos-arm64 | 0.1.0 | 32.00 | OK | |||
| r-release-macos-x86_64 | 0.1.0 | 56.00 | OK | |||
| r-release-windows-x86_64 | 0.1.0 | 17.00 | 125.00 | 142.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.1.0 | 31.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.0 | 59.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 0.2.0 | 5.00 | 20.00 | 25.00 | ERROR |
Version: 0.1.0
Check: package dependencies
Result: ERROR
Packages required but not available: 'rxode2', 'nlmixr2est'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-devel-windows-x86_64
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in ‘nlmixr2lib-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: addEta
> ### Title: Add random effects to a model
> ### Aliases: addEta
>
> ### ** Examples
>
> readModelDb("PK_1cmt") %>% addEta("ka")
→ Adding eta to lka instead of ka due to mu-referencing
ℹ parameter labels from comments are typically ignored in non-interactive mode
ℹ Need to run with the source intact to parse comments
Error: invalid expr for ini() modification
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/15s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(nlmixr2lib)
>
> test_check("nlmixr2lib")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 23 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-addEta.R:3:3'): addEta named parameter ─────────────────────────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(modelUpdate <- addEta(model, eta = "lka")) at test-addEta.R:3:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = "lka")
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
── Error ('test-addEta.R:22:3'): addEta mu-ref parameter ───────────────────────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(modelUpdate <- addEta(model, eta = "ka")) at test-addEta.R:22:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = "ka")
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
── Error ('test-addEta.R:41:3'): addEta multiple parameter, mu-ref and not ─────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-addEta.R:41:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = c("lvc", "ka"))
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalvc ~ 0.1, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalvc ~ 0.1, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
── Error ('test-addEta.R:72:3'): addEta named parameter ────────────────────────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(modelUpdate <- addEta(model, eta = "lka")) at test-addEta.R:72:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = "lka")
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 23 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in 'nlmixr2lib-Ex.R' failed
The error most likely occurred in:
> ### Name: addEta
> ### Title: Add random effects to a model
> ### Aliases: addEta
>
> ### ** Examples
>
> readModelDb("PK_1cmt") %>% addEta("ka")
→ Adding eta to lka instead of ka due to mu-referencing
ℹ parameter labels from comments are typically ignored in non-interactive mode
ℹ Need to run with the source intact to parse comments
Error: invalid expr for ini() modification
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.1.0
Check: tests
Result: ERROR
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
>
> library(testthat)
> library(nlmixr2lib)
>
> test_check("nlmixr2lib")
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 23 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-addEta.R:3:3'): addEta named parameter ─────────────────────────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(modelUpdate <- addEta(model, eta = "lka")) at test-addEta.R:3:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = "lka")
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
── Error ('test-addEta.R:22:3'): addEta mu-ref parameter ───────────────────────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(modelUpdate <- addEta(model, eta = "ka")) at test-addEta.R:22:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = "ka")
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
── Error ('test-addEta.R:41:3'): addEta multiple parameter, mu-ref and not ─────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(...) at test-addEta.R:41:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = c("lvc", "ka"))
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalvc ~ 0.1, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalvc ~ 0.1, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
── Error ('test-addEta.R:72:3'): addEta named parameter ────────────────────────
Error: invalid expr for ini() modification
Backtrace:
▆
1. ├─base::suppressMessages(modelUpdate <- addEta(model, eta = "lka")) at test-addEta.R:72:2
2. │ └─base::withCallingHandlers(...)
3. └─nlmixr2lib::addEta(model, eta = "lka")
4. ├─base::do.call(rxode2::ini, iniArgs)
5. ├─rxode2 (local) `<fn>`(`<fn>`, etalka ~ 0.1)
6. └─rxode2:::ini.default(`<fn>`, etalka ~ 0.1)
7. └─base::lapply(...)
8. └─rxode2 (local) FUN(X[[i]], ...)
9. └─rxode2::.iniHandleLine(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 23 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.2.0
Check: package dependencies
Result: ERROR
Package required and available but unsuitable version: 'rxode2'
See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
Flavor: r-oldrel-windows-ix86+x86_64