Last updated on 2021-09-26 16:49:05 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0-16 | 32.91 | 336.94 | 369.85 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0-16 | 24.53 | 245.39 | 269.92 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0-16 | 431.87 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0-16 | 442.07 | ERROR | |||
| r-devel-windows-x86_64 | 1.0-16 | 35.00 | 300.00 | 335.00 | OK | |
| r-devel-windows-x86_64-gcc10-UCRT | 1.0-16 | ERROR | ||||
| r-patched-linux-x86_64 | 1.0-16 | 32.16 | 328.04 | 360.20 | OK | |
| r-patched-solaris-x86 | 1.0-16 | 483.80 | ERROR | |||
| r-release-linux-x86_64 | 1.0-16 | 32.86 | 316.83 | 349.69 | ERROR | |
| r-release-macos-arm64 | 1.0-16 | NOTE | ||||
| r-release-macos-x86_64 | 1.0-16 | OK | ||||
| r-release-windows-ix86+x86_64 | 1.0-16 | 45.00 | 359.00 | 404.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0-16 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0-16 | 44.00 | 366.00 | 410.00 | OK |
Version: 1.0-16
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'Guerry'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-gcc10-UCRT, r-patched-solaris-x86, r-release-linux-x86_64
Version: 1.0-16
Check: tests
Result: ERROR
Running 'add.R' [20s/23s]
Running 'ade4-functions.R' [28s/33s]
Running 'adegraphics.R' [6s/7s]
Running 'nbgraph.R' [7s/8s]
Running 'panelSpatial.R' [3s/3s]
Running 'parameter.R' [5s/6s]
Running 's.arrow.R' [3s/3s]
Running 's.class.R' [3s/4s]
Running 's.corcircle.R' [2s/2s]
Running 's.density.R' [5s/6s]
Running 's.distri.R' [3s/4s]
Running 's.image.R' [6s/7s]
Running 's.label.R' [3s/3s]
Running 's.logo.R' [2s/2s]
Running 's.match.R' [2s/3s]
Running 's.traject.R' [2s/2s]
Running 's.value.R' [5s/5s]
Running 's1d.barchart.R' [3s/4s]
Running 's1d.boxplot.R' [4s/4s]
Running 's1d.class.R' [3s/3s]
Running 's1d.density.R' [3s/4s]
Running 's1d.distri.R' [3s/4s]
Running 's1d.gauss.R' [4s/4s]
Running 's1d.hist.R' [12s/13s]
Running 's1d.label.R' [2s/2s]
Running 's1d.match.R' [2s/2s]
Running 'table.image.R' [2s/2s]
Running 'table.value.R' [4s/5s]
Running 'triangle.R' [5s/6s]
Running the tests in 'tests/panelSpatial.R' failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0-16
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'adegraphics.Rmd' using rmarkdown
Quitting from lines 1145-1155 (adegraphics.Rmd)
Error: processing vignette 'adegraphics.Rmd' failed with diagnostics:
there is no package called 'Guerry'
--- failed re-building 'adegraphics.Rmd'
SUMMARY: processing the following file failed:
'adegraphics.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64
Version: 1.0-16
Check: tests
Result: ERROR
Running ‘add.R’ [14s/22s]
Running ‘ade4-functions.R’ [19s/28s]
Running ‘adegraphics.R’ [5s/8s]
Running ‘nbgraph.R’ [5s/8s]
Running ‘panelSpatial.R’ [2s/4s]
Running ‘parameter.R’ [4s/7s]
Running ‘s.arrow.R’ [2s/3s]
Running ‘s.class.R’ [2s/3s]
Running ‘s.corcircle.R’ [1s/2s]
Running ‘s.density.R’ [5s/7s]
Running ‘s.distri.R’ [2s/3s]
Running ‘s.image.R’ [4s/6s]
Running ‘s.label.R’ [2s/3s]
Running ‘s.logo.R’ [1s/2s]
Running ‘s.match.R’ [2s/3s]
Running ‘s.traject.R’ [2s/3s]
Running ‘s.value.R’ [3s/5s]
Running ‘s1d.barchart.R’ [2s/4s]
Running ‘s1d.boxplot.R’ [3s/4s]
Running ‘s1d.class.R’ [2s/3s]
Running ‘s1d.density.R’ [2s/4s]
Running ‘s1d.distri.R’ [2s/3s]
Running ‘s1d.gauss.R’ [3s/4s]
Running ‘s1d.hist.R’ [8s/12s]
Running ‘s1d.label.R’ [2s/3s]
Running ‘s1d.match.R’ [1s/3s]
Running ‘table.image.R’ [2s/3s]
Running ‘table.value.R’ [3s/4s]
Running ‘triangle.R’ [4s/6s]
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0-16
Check: tests
Result: ERROR
Running ‘add.R’ [22s/27s]
Running ‘ade4-functions.R’ [32s/36s]
Running ‘adegraphics.R’
Running ‘nbgraph.R’
Running ‘panelSpatial.R’
Running ‘parameter.R’
Running ‘s.arrow.R’
Running ‘s.class.R’
Running ‘s.corcircle.R’
Running ‘s.density.R’
Running ‘s.distri.R’
Running ‘s.image.R’
Running ‘s.label.R’
Running ‘s.logo.R’
Running ‘s.match.R’
Running ‘s.traject.R’
Running ‘s.value.R’
Running ‘s1d.barchart.R’
Running ‘s1d.boxplot.R’
Running ‘s1d.class.R’
Running ‘s1d.density.R’
Running ‘s1d.distri.R’
Running ‘s1d.gauss.R’
Running ‘s1d.hist.R’ [13s/16s]
Running ‘s1d.label.R’
Running ‘s1d.match.R’
Running ‘table.image.R’
Running ‘table.value.R’
Running ‘triangle.R’
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0-16
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘adegraphics.Rmd’ using rmarkdown
Quitting from lines 1145-1155 (adegraphics.Rmd)
Error: processing vignette 'adegraphics.Rmd' failed with diagnostics:
there is no package called 'Guerry'
--- failed re-building ‘adegraphics.Rmd’
SUMMARY: processing the following file failed:
‘adegraphics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-gcc10-UCRT
Version: 1.0-16
Check: tests
Result: ERROR
Running ‘add.R’ [23s/23s]
Running ‘ade4-functions.R’ [31s/31s]
Running ‘adegraphics.R’
Running ‘nbgraph.R’
Running ‘panelSpatial.R’
Running ‘parameter.R’
Running ‘s.arrow.R’
Running ‘s.class.R’
Running ‘s.corcircle.R’
Running ‘s.density.R’
Running ‘s.distri.R’
Running ‘s.image.R’
Running ‘s.label.R’
Running ‘s.logo.R’
Running ‘s.match.R’
Running ‘s.traject.R’
Running ‘s.value.R’
Running ‘s1d.barchart.R’
Running ‘s1d.boxplot.R’
Running ‘s1d.class.R’
Running ‘s1d.density.R’
Running ‘s1d.distri.R’
Running ‘s1d.gauss.R’
Running ‘s1d.hist.R’ [14s/14s]
Running ‘s1d.label.R’
Running ‘s1d.match.R’
Running ‘table.image.R’
Running ‘table.value.R’
Running ‘triangle.R’
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0-16
Check: tests
Result: ERROR
Running 'add.R'
Running 'ade4-functions.R'
Running 'adegraphics.R'
Running 'nbgraph.R'
Running 'panelSpatial.R'
Running the tests in 'tests/panelSpatial.R' failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-devel-windows-x86_64-gcc10-UCRT
Version: 1.0-16
Check: installed package size
Result: NOTE
installed size is 5.1Mb
sub-directories of 1Mb or more:
R 1.5Mb
doc 3.0Mb
Flavors: r-patched-solaris-x86, r-release-macos-arm64
Version: 1.0-16
Check: tests
Result: ERROR
Running ‘add.R’ [24s/24s]
Running ‘ade4-functions.R’ [34s/34s]
Running ‘adegraphics.R’ [12s/12s]
Running ‘nbgraph.R’ [11s/11s]
Running ‘panelSpatial.R’
Running ‘parameter.R’
Running ‘s.arrow.R’
Running ‘s.class.R’
Running ‘s.corcircle.R’
Running ‘s.density.R’ [13s/13s]
Running ‘s.distri.R’
Running ‘s.image.R’
Running ‘s.label.R’
Running ‘s.logo.R’
Running ‘s.match.R’
Running ‘s.traject.R’
Running ‘s.value.R’
Running ‘s1d.barchart.R’
Running ‘s1d.boxplot.R’
Running ‘s1d.class.R’
Running ‘s1d.density.R’
Running ‘s1d.distri.R’
Running ‘s1d.gauss.R’
Running ‘s1d.hist.R’ [16s/16s]
Running ‘s1d.label.R’
Running ‘s1d.match.R’
Running ‘table.image.R’
Running ‘table.value.R’
Running ‘triangle.R’
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0-16
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘adegraphics.Rmd’ using rmarkdown
Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed.
Quitting from lines 1145-1155 (adegraphics.Rmd)
Error: processing vignette 'adegraphics.Rmd' failed with diagnostics:
there is no package called 'Guerry'
--- failed re-building ‘adegraphics.Rmd’
SUMMARY: processing the following file failed:
‘adegraphics.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0-16
Check: tests
Result: ERROR
Running ‘add.R’ [19s/21s]
Running ‘ade4-functions.R’ [25s/28s]
Running ‘adegraphics.R’ [6s/7s]
Running ‘nbgraph.R’ [7s/7s]
Running ‘panelSpatial.R’ [2s/3s]
Running ‘parameter.R’ [5s/6s]
Running ‘s.arrow.R’ [2s/3s]
Running ‘s.class.R’ [3s/3s]
Running ‘s.corcircle.R’ [2s/2s]
Running ‘s.density.R’ [5s/6s]
Running ‘s.distri.R’ [3s/3s]
Running ‘s.image.R’ [5s/6s]
Running ‘s.label.R’ [2s/3s]
Running ‘s.logo.R’ [2s/2s]
Running ‘s.match.R’ [2s/2s]
Running ‘s.traject.R’ [2s/3s]
Running ‘s.value.R’ [4s/5s]
Running ‘s1d.barchart.R’ [3s/3s]
Running ‘s1d.boxplot.R’ [4s/4s]
Running ‘s1d.class.R’ [2s/3s]
Running ‘s1d.density.R’ [3s/3s]
Running ‘s1d.distri.R’ [3s/3s]
Running ‘s1d.gauss.R’ [3s/4s]
Running ‘s1d.hist.R’ [11s/13s]
Running ‘s1d.label.R’ [2s/2s]
Running ‘s1d.match.R’ [2s/2s]
Running ‘table.image.R’ [2s/3s]
Running ‘table.value.R’ [4s/4s]
Running ‘triangle.R’ [4s/5s]
Running the tests in ‘tests/panelSpatial.R’ failed.
Complete output:
> library(ade4)
> library(adegraphics)
Registered S3 methods overwritten by 'adegraphics':
method from
biplot.dudi ade4
kplot.foucart ade4
kplot.mcoa ade4
kplot.mfa ade4
kplot.pta ade4
kplot.sepan ade4
kplot.statis ade4
scatter.coa ade4
scatter.dudi ade4
scatter.nipals ade4
scatter.pco ade4
score.acm ade4
score.mix ade4
score.pca ade4
screeplot.dudi ade4
Attaching package: 'adegraphics'
The following objects are masked from 'package:ade4':
kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image,
s.label, s.logo, s.match, s.traject, s.value, table.value,
triangle.class
> library(sp)
> pdf("panelSpatial.pdf")
>
> ## ex1
> data(mafragh, package = "ade4")
> dfxy1 <- coordinates(mafragh$Spatial)
> g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0)
>
>
> ## ex2
> data(meuse, package = "sp")
> coordinates(meuse) <- ~ x + y
> data(meuse.grid, package = "sp")
> m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid)
> data(meuse.riv)
> meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv")))
>
> scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar())
> text11 <- list("sp.text", c(179900, 329700), "0")
> text21 <- list("sp.text", c(180400, 329700), "500 m")
> arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow())
> river <- list("sp.polygons", meuse.sr, fill = "lightblue")
> dfxy2 <- as.data.frame(coordinates(meuse))
> g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m)
>
> fac <- meuse@data$ffreq
> levels(fac)[1] <- "1 in 2 years"
> levels(fac)[2] <- "1 in 10 years"
> levels(fac)[3] <- "1 in 50 years"
> arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400)
> scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black"))
> text12 <- list("sp.text", c(178050, 333700), "0")
> text22 <- list("sp.text", c(178550, 333700), "500 m")
> g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4),
+ pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0,
+ porigin.include = FALSE, Sp = meuse.sr)
>
> ## ex3
> library(Guerry)
Error in library(Guerry) : there is no package called 'Guerry'
Execution halted
Flavor: r-release-linux-x86_64