Available CRAN Packages By Date of Publication

Date	Package	Title
2018-01-23	ASICS	Automatic Statistical Identification in Complex Spectra
2018-01-23	autothresholdr	An R Port of the 'ImageJ' Plugin 'Auto Threshold'
2018-01-23	BANEScarparkinglite	Working with Car Parking Data for Bath and North East Somerset
2018-01-23	bfp	Bayesian Fractional Polynomials
2018-01-23	BibPlots	Plot Functions for Use in Bibliometrics
2018-01-23	brms	Bayesian Regression Models using Stan
2018-01-23	cattonum	Encode Categorical Features
2018-01-23	civis	R Client for the 'Civis data science API'
2018-01-23	CMatching	Matching Algorithms for Causal Inference with Clustered Data
2018-01-23	crch	Censored Regression with Conditional Heteroscedasticity
2018-01-23	detpack	Density Estimation and Random Number Generation with Distribution Element Trees
2018-01-23	DT	A Wrapper of the JavaScript Library 'DataTables'
2018-01-23	easycsv	Load Multiple 'csv' and 'txt' Tables
2018-01-23	frailtyHL	Frailty Models via Hierarchical Likelihood
2018-01-23	geno2proteo	Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci
2018-01-23	greta	Simple and Scalable Statistical Modelling in R
2018-01-23	hdm	High-Dimensional Metrics
2018-01-23	HEMDAG	Hierarchical Ensemble Methods for Directed Acyclic Graphs
2018-01-23	httk	High-Throughput Toxicokinetics
2018-01-23	jmv	The 'jamovi' Analyses
2018-01-23	MaxentVariableSelection	Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling
2018-01-23	memapp	The Moving Epidemic Method Web Application
2018-01-23	MRS	Multi-Resolution Scanning for Cross-Sample Differences
2018-01-23	mtsdi	Multivariate Time Series Data Imputation
2018-01-23	odbc	Connect to ODBC Compatible Databases (using the DBI Interface)
2018-01-23	politeness	Detecting Politeness Features in Text
2018-01-23	pre	Prediction Rule Ensembles
2018-01-23	RATest	Randomization Tests
2018-01-23	RDocumentation	Integrate R with 'RDocumentation'
2018-01-23	red	IUCN Redlisting Tools
2018-01-23	RQGIS	Integrating R with QGIS
2018-01-23	rtkore	'STK++' Core Library Integration to 'R' using 'Rcpp'
2018-01-23	sensiPhy	Sensitivity Analysis for Comparative Methods
2018-01-23	soilDB	Soil Database Interface
2018-01-23	soundgen	Parametric Voice Synthesis
2018-01-23	sparklyr	R Interface to Apache Spark
2018-01-23	SpatialVx	Spatial Forecast Verification
2018-01-23	surveillance	Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
2018-01-23	treespace	Statistical Exploration of Landscapes of Phylogenetic Trees
2018-01-23	vpc	Create Visual Predictive Checks
2018-01-23	xgboost	Extreme Gradient Boosting
2018-01-23	XLConnect	Excel Connector for R
2018-01-23	XLConnectJars	JAR Dependencies for the XLConnect Package
2018-01-23	Xplortext	Statistical Analysis of Textual Data
2018-01-23	xtractomatic	Accessing Environmental Data from ERD's ERDDAP Server
2018-01-23	zoon	Reproducible, Accessible & Shareable Species Distribution Modelling
2018-01-22	BANOVA	Hierarchical Bayesian ANOVA Models
2018-01-22	BatchGetSymbols	Downloads and Organizes Financial Data for Multiple Tickers
2018-01-22	Bioi	Biological Image Analysis
2018-01-22	cleanNLP	A Tidy Data Model for Natural Language Processing
2018-01-22	crul	HTTP Client
2018-01-22	ECoL	Complexity Measures for Classification Problems
2018-01-22	elect	Estimation of Life Expectancies Using Multi-State Models
2018-01-22	enetLTS	Robust and Sparse Methods for High Dimensional Linear and Logistic Regression
2018-01-22	fastmaRching	Fast Marching Method for Modelling Evolving Boundaries
2018-01-22	gLRTH	Genome-Wide Association and Linkage Analysis under Heterogeneity
2018-01-22	infer	Tidy Statistical Inference
2018-01-22	jcext	Extended Classification of Weather Types
2018-01-22	mdmb	Model Based Treatment of Missing Data
2018-01-22	moderndive	Accompaniment Package to ModernDive: An Introduction to Statistical and Data Sciences via R
2018-01-22	nonnest2	Tests of Non-Nested Models
2018-01-22	OBsMD	Objective Bayesian Model Discrimination in Follow-Up Designs
2018-01-22	OmicsPLS	Perform Two-Way Orthogonal Partial Least Squares
2018-01-22	pals	Color Palettes, Colormaps, and Tools to Evaluate Them
2018-01-22	PAmeasures	Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data
2018-01-22	promote	Client for the 'Alteryx Promote' API
2018-01-22	RRPP	Linear Model Evaluation with Randomized Residuals in a Permutation Procedure
2018-01-22	skpr	Design of Experiments Suite: Generate and Evaluate Optimal Designs
2018-01-22	survey	Analysis of Complex Survey Samples
2018-01-22	tibble	Simple Data Frames
2018-01-22	TimeSeries.OBeu	Time Series Analysis 'OpenBudgets'
2018-01-22	TimeVTree	Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach
2018-01-22	tinytex	Helper Functions to Install and Maintain 'TeX Live', and Compile 'LaTeX' Documents
2018-01-22	tsDyn	Nonlinear Time Series Models with Regime Switching
2018-01-22	uiucthemes	'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
2018-01-22	upwaver	Access 'Upwave' API
2018-01-22	xfun	Miscellaneous Functions by 'Yihui Xie'
2018-01-21	chunkR	Read Tables in Chunks
2018-01-21	clustermq	Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM)
2018-01-21	CreditRisk	Evaluation of Credit Risk with Structural and Reduced Form Models
2018-01-21	datastructures	Implementation of Core Data Structures
2018-01-21	fDMA	Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes
2018-01-21	FindIt	Finding Heterogeneous Treatment Effects
2018-01-21	funModeling	Exploratory Data Analysis and Data Preparation Tool-Box Book
2018-01-21	geophys	Geophysics, Continuum Mechanics, Gravity Modeling
2018-01-21	grattan	Australian Tax Policy Analysis
2018-01-21	ICAOD	Optimal Designs for Nonlinear Models
2018-01-21	itsmr	Time Series Analysis Using the Innovations Algorithm
2018-01-21	joineRML	Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes
2018-01-21	LinkageMapView	Plot Linkage Group Maps with Quantitative Trait Loci
2018-01-21	listenv	Environments Behaving (Almost) as Lists
2018-01-21	lwgeom	Bindings to Selected 'liblwgeom' Functions for Simple Features
2018-01-21	MCMCpack	Markov Chain Monte Carlo (MCMC) Package
2018-01-21	MetaLonDA	Metagenomics Longitudinal Differential Abundance Method
2018-01-21	metaplot	Data-Driven Diagnostic Plots
2018-01-21	MGLM	Multivariate Response Generalized Linear Models
2018-01-21	nofrills	Low-Cost Anonymous Functions
2018-01-21	PropClust	Propensity Clustering and Decomposition
2018-01-21	Rblpapi	R Interface to 'Bloomberg'
2018-01-21	rMR	Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions
2018-01-21	rSCA	An R Package for Stepwise Cluster Analysis
2018-01-21	RTransProb	Analyze and Forecast Credit Migrations
2018-01-21	scorecard	Credit Risk Scorecard
2018-01-21	seplyr	Improved Standard Evaluation Interfaces for Common Data Manipulation Tasks
2018-01-21	snakecase	Convert Strings into any Case
2018-01-21	tropAlgebra	Tropical Algebraic Functions
2018-01-21	wrapr	Wrap R Functions for Debugging and Parametric Programming
2018-01-20	agriTutorial	Tutorial Analysis of Some Agricultural Experiments
2018-01-20	castor	Efficient Phylogenetics on Large Trees
2018-01-20	cdata	Fluid Data Transformations
2018-01-20	dat	Tools for Data Manipulation
2018-01-20	equSA	Estimate Directed and Undirected Graphical Models and Construct Networks
2018-01-20	ewoc	Escalation with Overdose Control
2018-01-20	heatmaply	Interactive Cluster Heat Maps Using 'plotly'
2018-01-20	htmlTable	Advanced Tables for Markdown/HTML
2018-01-20	htmlwidgets	HTML Widgets for R
2018-01-20	LoopAnalyst	A Collection of Tools to Conduct Levins' Loop Analysis
2018-01-20	metacom	Analysis of the 'Elements of Metacommunity Structure'
2018-01-20	randomizr	Easy-to-Use Tools for Common Forms of Random Assignment and Sampling
2018-01-20	RClickhouse	A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing Basic 'dplyr' Support
2018-01-20	Rcpp	Seamless R and C++ Integration
2018-01-20	replyr	Reliable Plying of Remote or Big Data with R
2018-01-20	rstan	R Interface to Stan
2018-01-20	Rwave	Time-Frequency Analysis of 1-D Signals
2018-01-20	StanHeaders	C++ Header Files for Stan
2018-01-20	Surrogate	Evaluation of Surrogate Endpoints in Clinical Trials
2018-01-20	svgViewR	3D Animated Interactive Visualizations Using SVG
2018-01-20	unpivotr	Unpivot Complex and Irregular Data Layouts
2018-01-20	urltools	Vectorised Tools for URL Handling and Parsing
2018-01-20	vtreat	A Statistically Sound 'data.frame' Processor/Conditioner
2018-01-20	WVPlots	Common Plots for Analysis
2018-01-19	abjutils	Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association
2018-01-19	adabag	Applies Multiclass AdaBoost.M1, SAMME and Bagging
2018-01-19	AnglerCreelSurveySimulation	Simulate a Bus Route Creel Survey of Anglers
2018-01-19	arrangements	Fast Generators and Iterators for Permutations, Combinations and Partitions
2018-01-19	bayesTFR	Bayesian Fertility Projection
2018-01-19	Chaos01	0-1 Test for Chaos
2018-01-19	crossword.r	Generating Crosswords from Word Lists
2018-01-19	descr	Descriptive Statistics
2018-01-19	dmm	Dyadic Mixed Model for Pedigree Data
2018-01-19	dnet	Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
2018-01-19	dynatopmodel	Implementation of the Dynamic TOPMODEL Hydrological Model
2018-01-19	face	Fast Covariance Estimation for Sparse Functional Data
2018-01-19	FHDI	Fractional Hot Deck and Fully Efficient Fractional Imputation
2018-01-19	fs	Cross-Platform File System Operations Based on 'libuv'
2018-01-19	glamlasso	Penalization in Large Scale Generalized Linear Array Models
2018-01-19	HDPenReg	High-Dimensional Penalized Regression
2018-01-19	ICcalib	Cox Model with Interval-Censored Starting Time of a Covariate
2018-01-19	icr	Compute Krippendorff's Alpha
2018-01-19	jdx	'Java' Data Exchange for 'R' and 'rJava'
2018-01-19	lbreg	Log-Binomial Regression with Constrained Optimization
2018-01-19	LN0SCIs	Simultaneous CIs for Ratios of Means of Log-Normal Populations with Zeros
2018-01-19	longRPart2	Recursive Partitioning of Longitudinal Data
2018-01-19	LSAmitR	Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R'
2018-01-19	mvabund	Statistical Methods for Analysing Multivariate Abundance Data
2018-01-19	pivotaltrackR	A Client for the 'Pivotal Tracker' API
2018-01-19	PSW	Propensity Score Weighting Methods for Dichotomous Treatments
2018-01-19	pubh	A Toolbox for Public Health and Epidemiology
2018-01-19	REddyProc	Post Processing of (Half-)Hourly Eddy-Covariance Measurements
2018-01-19	RNAseqNet	Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation
2018-01-19	rosetteApi	'Rosette' API
2018-01-19	rrpack	Reduced-Rank Regression
2018-01-19	RSEIS	Seismic Time Series Analysis Tools
2018-01-19	rsMove	Remote Sensing for Movement Ecology
2018-01-19	sp	Classes and Methods for Spatial Data
2018-01-19	spcosa	Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata
2018-01-19	TreeBUGS	Hierarchical Multinomial Processing Tree Modeling
2018-01-19	usethis	Automate Package and Project Setup
2018-01-19	wrassp	Interface to the 'ASSP' Library
2018-01-18	bcmaps	Map Layers and Spatial Utilities for British Columbia
2018-01-18	bibliometrix	An R-Tool for Comprehensive Science Mapping Analysis
2018-01-18	binnednp	Nonparametric Estimation for Interval-Grouped Data
2018-01-18	Bolstad	Functions for Elementary Bayesian Inference
2018-01-18	canprot	Chemical Composition of Differential Protein Expression
2018-01-18	canvasXpress	Visualization Package for CanvasXpress in R
2018-01-18	causaleffect	Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
2018-01-18	cgdsr	R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
2018-01-18	ctv	CRAN Task Views
2018-01-18	dtree	Decision Trees
2018-01-18	ensembleBMA	Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2018-01-18	EnvCpt	Detection of Structural Changes in Climate and Environment Time Series
2018-01-18	experiment	R Package for Designing and Analyzing Randomized Experiments
2018-01-18	FENmlm	Fixed Effects Nonlinear Maximum Likelihood Models
2018-01-18	furniture	Furniture for Quantitative Scientists
2018-01-18	fuzzywuzzyR	Fuzzy String Matching
2018-01-18	GEOmap	Topographic and Geologic Mapping
2018-01-18	gkmSVM	Gapped-Kmer Support Vector Machine
2018-01-18	GPoM	Generalized Polynomial Modelling
2018-01-18	haven	Import and Export 'SPSS', 'Stata' and 'SAS' Files
2018-01-18	homologene	Quick Access to Homology Information
2018-01-18	PEIP	Geophysical Inverse Theory and Optimization
2018-01-18	PMCMR	Calculate Pairwise Multiple Comparisons of Mean Rank Sums
2018-01-18	propr	Calculating Proportionality Between Vectors of Compositional Data
2018-01-18	PythonInR	Use 'Python' from Within 'R'
2018-01-18	redcapAPI	Interface to 'REDCap'
2018-01-18	Renvlp	Computing Envelope Estimators
2018-01-18	RFOC	Graphics for Spherical Distributions and Earthquake Focal Mechanisms
2018-01-18	rlas	Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data
2018-01-18	RPMG	Graphical User Interface (GUI) for Interactive R Analysis Sessions
2018-01-18	rreg	Visualization for Norwegian Health Quality Registries
2018-01-18	rTableICC	Random Generation of Contingency Tables
2018-01-18	RTOMO	Visualization for Seismic Tomography
2018-01-18	SDT	Self-Determination Theory Measures
2018-01-18	seminr	Domain-Specific Language for Building PLS Structural Equation Models
2018-01-18	SMMA	Soft Maximin Estimation for Large Scale Array-Tensor Models
2018-01-18	spaMM	Mixed-Effect Models, Particularly Spatial Models
2018-01-18	tfestimators	Interface to 'TensorFlow' Estimators
2018-01-18	tfruns	Training Run Tools for 'TensorFlow'
2018-01-18	TukeyRegion	Tukey Region and Median
2018-01-18	vecsets	Like base::sets Tools But Keeps Duplicate Elements
2018-01-18	zenplots	Zigzag Expanded Navigation Plots
2018-01-18	zoeppritz	Seismic Reflection and Scattering Coefficients
2018-01-17	bbw	Blocked Weighted Bootstrap
2018-01-17	BMRBr	'BMRB' File Downloader
2018-01-17	ClusterR	Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans and K-Medoids Clustering
2018-01-17	cobalt	Covariate Balance Tables and Plots
2018-01-17	conting	Bayesian Analysis of Contingency Tables
2018-01-17	datarobot	'DataRobot' Predictive Modeling API
2018-01-17	dLagM	Time Series Regression Models with Distributed Lag Models
2018-01-17	effectR	Predicts Oomycete Effectors
2018-01-17	ETLUtils	Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
2018-01-17	FarmSelect	Factor Adjusted Robust Model Selection
2018-01-17	fulltext	Full Text of 'Scholarly' Articles Across Many Data Sources
2018-01-17	GenSA	Generalized Simulated Annealing
2018-01-17	GGIR	Raw Accelerometer Data Analysis
2018-01-17	idefix	Efficient Designs for Discrete Choice Experiments
2018-01-17	interp	Interpolation Methods
2018-01-17	IROmiss	Imputation Regularized Optimization Algorithm
2018-01-17	junctions	The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
2018-01-17	keras	R Interface to 'Keras'
2018-01-17	lslx	Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood
2018-01-17	markmyassignment	Automatic Marking of R Assignments
2018-01-17	mau	Decision Models with Multi Attribute Utility Theory
2018-01-17	Miso	Multi-Isotope Labeling for Metabolomics Analysis
2018-01-17	npsf	Nonparametric and Stochastic Efficiency and Productivity Analysis
2018-01-17	PMCMRplus	Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended
2018-01-17	PWFSLSmoke	Utilities for Working with Air Quality Monitoring Data
2018-01-17	pwrFDR	FDR Power
2018-01-17	rGroovy	Groovy Language Integration
2018-01-17	Rlda	Bayesian LDA for Mixed-Membership Clustering Analysis
2018-01-17	sumFREGAT	Fast Region-Based Association Tests on Summary Statistics
2018-01-17	tensorflow	R Interface to 'TensorFlow'
2018-01-17	tidypredict	Run Predictions Inside the Database
2018-01-16	adespatial	Multivariate Multiscale Spatial Analysis
2018-01-16	bnpsd	Simulate Genotypes from the BN-PSD Admixture Model
2018-01-16	clespr	Composite Likelihood Estimation for Spatial Data
2018-01-16	dawai	Discriminant Analysis with Additional Information
2018-01-16	defrostR	An Amphibian Systematics Tool
2018-01-16	EMCluster	EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
2018-01-16	filenamer	Easy Management of File Names
2018-01-16	GCalignR	Simple Peak Alignment for Gas-Chromatography Data
2018-01-16	GENEAclassify	Segmentation and Classification of Accelerometer Data
2018-01-16	httptest	A Test Environment for HTTP Requests
2018-01-16	ioncopy	Calling Copy Number Alterations in Amplicon Sequencing Data
2018-01-16	Jdmbs	Monte Carlo Option Pricing Algorithm for Jump Diffusion Models with Correlational Companies
2018-01-16	JuniperKernel	Kernel for 'Jupyter'
2018-01-16	KernelKnn	Kernel k Nearest Neighbors
2018-01-16	ks	Kernel Smoothing
2018-01-16	LPM	Linear Parametric Models Applied to Hydrological Series
2018-01-16	mazeinda	Monotonic Association on Zero-Inflated Data
2018-01-16	mma	Multiple Mediation Analysis
2018-01-16	model4you	Stratified and Personalised Models Based on Model-Based Trees and Forests
2018-01-16	natural	Estimating the Error Variance in a High-Dimensional Linear Model
2018-01-16	nngeo	k-Nearest Neighbor Join for Spatial Data
2018-01-16	opencage	Interface to the OpenCage API
2018-01-16	OpenImageR	An Image Processing Toolkit
2018-01-16	optimus	Model Based Diagnostics for Multivariate Cluster Analysis
2018-01-16	optmatch	Functions for Optimal Matching
2018-01-16	palmtree	Partially Additive (Generalized) Linear Model Trees
2018-01-16	prettydoc	Creating Pretty Documents from R Markdown
2018-01-16	prrd	Parallel Runs of Reverse Depends
2018-01-16	randomLCA	Random Effects Latent Class Analysis
2018-01-16	RcppMsgPack	'MsgPack' C++ Header Files and Interface Functions for R
2018-01-16	ROI.plugin.lpsolve	'lp_solve' Plugin for the 'R' Optimization Infrastructure
2018-01-16	searcher	Query Search Interfaces
2018-01-16	sentimentr	Calculate Text Polarity Sentiment
2018-01-16	showtext	Using Fonts More Easily in R Graphs
2018-01-16	simmer.bricks	Helper Methods for 'simmer' Trajectories
2018-01-16	sparseinv	Computation of the Sparse Inverse Subset
2018-01-16	SPCAvRP	Sparse Principal Component Analysis via Random Projections (SPCAvRP)
2018-01-16	splashr	Tools to Work with the 'Splash' 'JavaScript' Rendering and Scraping Service
2018-01-16	SSN	Spatial Modeling on Stream Networks
2018-01-16	StatCharrms	Statistical Analysis of Chemistry, Histopathology, and Reproduction Endpoints Including Repeated Measures and Multi-Generation Studies
2018-01-16	svars	Data-Driven Identification of SVAR Models
2018-01-16	sysfonts	Loading Fonts into R
2018-01-16	TE	Insertion/Deletion Dynamics for Transposable Elements
2018-01-16	textTinyR	Text Processing for Small or Big Data Files
2018-01-16	toolmaRk	Tests for Same-Source of Toolmarks
2018-01-15	bnlearn	Bayesian Network Structure Learning, Parameter Learning and Inference
2018-01-15	CLA	Critical Line Algorithm in Pure R
2018-01-15	CRPClustering	Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy
2018-01-15	dissever	Spatial Downscaling using the Dissever Algorithm
2018-01-15	dplyr.teradata	A 'Teradata' Backend for 'dplyr'
2018-01-15	easySdcTable	Easy Interface to the Statistical Disclosure Control Package 'sdcTable'
2018-01-15	EDA	Energy Decomposition Analysis
2018-01-15	FREGAT	Family REGional Association Tests
2018-01-15	future.apply	Apply Function to Elements in Parallel using Futures
2018-01-15	ggeffects	Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
2018-01-15	GoogleKnowledgeGraphR	Retrieve Information from 'Google Knowledge Graph' API
2018-01-15	hexbin	Hexagonal Binning Routines
2018-01-15	io	A Unified Framework for Input-Output Operations in R
2018-01-15	kableExtra	Construct Complex Table with 'kable' and Pipe Syntax
2018-01-15	lingtypology	Linguistic Typology and Mapping
2018-01-15	mgcv	Mixed GAM Computation Vehicle with Automatic Smoothness Estimation
2018-01-15	microdemic	'Microsoft Academic' API Client
2018-01-15	miniCRAN	Create a Mini Version of CRAN Containing Only Selected Packages
2018-01-15	photobiologyFilters	Spectral Transmittance Data for Filters
2018-01-15	popkin	Estimate Kinship and FST under Arbitrary Population Structure
2018-01-15	poppr	Genetic Analysis of Populations with Mixed Reproduction
2018-01-15	r6extended	Extension for 'R6' Base Class
2018-01-15	RCRnorm	An Integrated Regression Model for Normalizing 'NanoString nCounter' Data
2018-01-15	rNOMADS	An Interface to the NOAA Operational Model Archive and Distribution System
2018-01-15	RPPanalyzer	Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
2018-01-15	seacarb	Seawater Carbonate Chemistry
2018-01-15	socialmixr	Social Mixing Matrices for Infectious Disease Modelling
2018-01-15	tcgsaseq	Time-Course Gene Set Analysis for RNA-Seq Data
2018-01-15	tfdatasets	Interface to 'TensorFlow' Datasets
2018-01-15	TrajDataMining	Trajectories Data Mining
2018-01-15	udpipe	Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
2018-01-14	adaptMCMC	Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
2018-01-14	COMBAT	A Combined Association Test for Genes using Summary Statistics
2018-01-14	Compositional	Compositional Data Analysis
2018-01-14	cordillera	Calculation of the OPTICS Cordillera
2018-01-14	crypto	Cryptocurrency Market Data
2018-01-14	diceR	Diverse Cluster Ensemble in R
2018-01-14	digest	Create Compact Hash Digests of R Objects
2018-01-14	Fragman	Fragment Analysis in R
2018-01-14	MonetDBLite	In-Process Version of 'MonetDB'
2018-01-14	pcaPP	Robust PCA by Projection Pursuit
2018-01-14	photobiologyLEDs	Spectral Data for Light-Emitting-Diodes
2018-01-14	pillar	Coloured Formatting for Columns
2018-01-14	rvinecopulib	High Performance Algorithms for Vine Copula Modeling
2018-01-14	shinymaterial	Implement Material Design in Shiny Applications
2018-01-14	sjstats	Collection of Convenient Functions for Common Statistical Computations
2018-01-14	summarytools	Tools to Quickly and Neatly Summarize Data
2018-01-14	textclean	Text Cleaning Tools
2018-01-14	WeightIt	Weighting for Covariate Balance in Observational Studies
2018-01-13	ACMEeqtl	Estimation of Interpretable eQTL Effect Sizes Using a Log of Linear Model
2018-01-13	bnclassify	Learning Discrete Bayesian Network Classifiers from Data
2018-01-13	BNN	Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection
2018-01-13	BVSNLP	Bayesian Variable Selection in High Dimensional Settings using Non-Local Prior
2018-01-13	document	Run 'roxygen2' on (Chunks of) Single Code Files
2018-01-13	EcoGenetics	Management and Exploratory Analysis of Spatial Data in Landscape Genetics
2018-01-13	Emcdf	Computation and Visualization of Empirical Joint Distribution (Empirical Joint CDF)
2018-01-13	filematrix	File-Backed Matrix Class with Convenient Read and Write Access
2018-01-13	fpc	Flexible Procedures for Clustering
2018-01-13	FRK	Fixed Rank Kriging
2018-01-13	gimms	Download and Process GIMMS NDVI3g Data
2018-01-13	hkclustering	Ensemble Clustering using K Means and Hierarchical Clustering
2018-01-13	IncDTW	Incremental Calculation of Dynamic Time Warping
2018-01-13	lava	Latent Variable Models
2018-01-13	lexicon	Lexicons for Text Analysis
2018-01-13	MatrixEQTL	Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
2018-01-13	metaSEM	Meta-Analysis using Structural Equation Modeling
2018-01-13	np	Nonparametric Kernel Smoothing Methods for Mixed Data Types
2018-01-13	PGRdup	Discover Probable Duplicates in Plant Genetic Resources Collections
2018-01-13	pointdensityP	Point Density for Geospatial Data
2018-01-13	PSPManalysis	Analysis of Physiologically Structured Population Models
2018-01-13	rgl	3D Visualization Using OpenGL
2018-01-13	RhpcBLASctl	Control the Number of Threads on 'BLAS'
2018-01-13	Rmpfr	R MPFR - Multiple Precision Floating-Point Reliable
2018-01-13	RndTexExams	Build and Grade Multiple Choice Exams with Randomized Content
2018-01-13	SARP.compo	Network-based Interpretation of Changes in Compositional Data
2018-01-13	shiftR	Fast Enrichment Analysis via Circular Permutations
2018-01-13	smooth	Forecasting Using Smoothing Functions
2018-01-13	stubthat	Stubbing Framework for R
2018-01-13	SuperRanker	Sequential Rank Agreement
2018-01-13	TukeyC	Conventional Tukey Test
2018-01-13	uavRmp	UAV Mission Planner
2018-01-13	Wmisc	Wamser Misc: Reading Files by Tokens, Stateful Computations, Utility Functions
2018-01-13	wunderscraper	Scrape the 'Wunderground' API
2018-01-12	blavaan	Bayesian Latent Variable Analysis
2018-01-12	coga	Convolution of Gamma Distributions
2018-01-12	data.world	Functions and Add-Ins for Working with 'data.world' Data Sets and Projects
2018-01-12	GD	Geographical Detectors
2018-01-12	moult	Models for Analysing Moult in Birds
2018-01-12	netgwas	Network-Based Genome Wide Association Studies
2018-01-12	ngspatial	Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data
2018-01-12	preText	Diagnostics to Assess the Effects of Text Preprocessing Decisions
2018-01-12	PRIMME	Eigenvalues and Singular Values and Vectors from Large Matrices
2018-01-12	qCBA	Quantitative Classification by Association Rules
2018-01-12	Rhpc	Permits *apply() Style Dispatch for 'HPC'
2018-01-12	rpart	Recursive Partitioning and Regression Trees
2018-01-12	rSQM	Statistical Downscaling Toolkit for Climate Change Scenario using Non Parametric Quantile Mapping
2018-01-12	rtop	Interpolation of Data with Variable Spatial Support
2018-01-12	yearn	Use and if Needed Install Packages from CRAN, BioConductor, CRAN Archive, and GitHub
2018-01-11	AlleleRetain	Allele Retention, Inbreeding, and Demography
2018-01-11	AnaCoDa	Analysis of Codon Data under Stationarity using a Bayesian Framework
2018-01-11	bayesSurv	Bayesian Survival Regression with Flexible Error and Random Effects Distributions
2018-01-11	bigmemory	Manage Massive Matrices with Shared Memory and Memory-Mapped Files
2018-01-11	DiceView	Plot Methods for Computer Experiments Design and Surrogate
2018-01-11	DirectedClustering	Directed Weighted Clustering Coefficient
2018-01-11	dotCall64	Enhanced Foreign Function Interface Supporting Long Vectors
2018-01-11	esmprep	Data Preparation During and After the Use of the Experience Sampling Methodology (ESM)
2018-01-11	HTSSIP	High Throughput Sequencing of Stable Isotope Probing Data Analysis
2018-01-11	irlba	Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices
2018-01-11	kexpmv	Matrix Exponential using Krylov Subspace Routines
2018-01-11	mapsapi	'sf'-Compatible Interface to 'Google Maps' APIs
2018-01-11	matchingMarkets	Analysis of Stable Matchings
2018-01-11	MCMCvis	Tools to Visualize, Manipulate, and Summarize MCMC Output
2018-01-11	MortalityLaws	Parametric Mortality Models, Life Tables and HMD
2018-01-11	pbdZMQ	Programming with Big Data – Interface to ZeroMQ
2018-01-11	pompom	Person-Oriented Method and Perturbation on the Model
2018-01-11	QCApro	Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis
2018-01-11	recipes	Preprocessing Tools to Create Design Matrices
2018-01-11	Rrdrand	'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
2018-01-11	sjlabelled	Labelled Data Utility Functions
2018-01-11	spBayesSurv	Bayesian Modeling and Analysis of Spatially Correlated Survival Data
2018-01-11	startup	Friendly R Startup Configuration
2018-01-11	text2vec	Modern Text Mining Framework for R
2018-01-11	tidyhydat	Extract and Tidy Canadian 'Hydrometric' Data
2018-01-11	trackdem	Particle Tracking and Demography
2018-01-11	tsdf	Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
2018-01-10	arules	Mining Association Rules and Frequent Itemsets
2018-01-10	autoplotly	Automatic Generation of Interactive Visualizations for Popular Statistical Results
2018-01-10	BinOrdNonNor	Concurrent Generation of Binary, Ordinal and Continuous Data
2018-01-10	BivUnifBin	Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data
2018-01-10	brant	Test for Parallel Regression Assumption
2018-01-10	changepointsVar	Change-Points Detections for Changes in Variance
2018-01-10	CorrToolBox	Modeling Correlational Magnitude Transformations in Discretization Contexts
2018-01-10	DataExplorer	Data Explorer
2018-01-10	dfcomb	Phase I/II Adaptive Dose-Finding Design for Combination Studies
2018-01-10	dfmta	Phase I/II Adaptive Dose-Finding Design for MTA
2018-01-10	DisHet	Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
2018-01-10	DMMF	Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
2018-01-10	dwapi	A Client for 'data.world' REST API
2018-01-10	emmeans	Estimated Marginal Means, aka Least-Squares Means
2018-01-10	ExpDE	Modular Differential Evolution for Experimenting with Operators
2018-01-10	FinancialInstrument	Financial Instrument Model Infrastructure and Meta-Data
2018-01-10	flextable	Functions for Tabular Reporting
2018-01-10	globals	Identify Global Objects in R Expressions
2018-01-10	IATScore	Scoring Algorithm for the Implicit Association Test (IAT)
2018-01-10	influxdbr	R Interface to InfluxDB
2018-01-10	ISOpureR	Deconvolution of Tumour Profiles
2018-01-10	kerasformula	A High-Level R Interface for Neural Nets
2018-01-10	kutils	Project Management Tools
2018-01-10	lba	Latent Budget Analysis for Compositional Data
2018-01-10	MBESS	The MBESS R Package
2018-01-10	microplot	Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
2018-01-10	motmot.2.0	Models of Trait Macroevolution on Trees
2018-01-10	MultiRNG	Multivariate Pseudo-Random Number Generation
2018-01-10	multiROC	Calculating and Visualizing ROC Curves Across Multi-Class Classifications
2018-01-10	multivariance	Measuring Multivariate Dependence Using Distance Multivariance
2018-01-10	ordinalCont	Ordinal Regression Analysis for Continuous Scales
2018-01-10	pbapply	Adding Progress Bar to '*apply' Functions
2018-01-10	permuco	Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals
2018-01-10	phylosignal	Exploring the Phylogenetic Signal in Continuous Traits
2018-01-10	PoisBinOrdNonNor	Generation of Up to Four Different Types of Variables
2018-01-10	PoisBinOrdNor	Data Generation with Poisson, Binary, Ordinal and Normal Components
2018-01-10	PoisNonNor	Simultaneous Generation of Count and Continuous Data
2018-01-10	psycho	Efficient and Publishing-Oriented Workflow for Psychological Science
2018-01-10	QCA	Qualitative Comparative Analysis
2018-01-10	QTLRel	Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
2018-01-10	R.rsp	Dynamic Generation of Scientific Reports
2018-01-10	RandPro	Random Projection with Classification
2018-01-10	rasterVis	Visualization Methods for Raster Data
2018-01-10	rFSA	Feasible Solution Algorithm for Finding Best Subsets and Interactions
2018-01-10	rhandsontable	Interface to the 'Handsontable.js' Library
2018-01-10	RMixpanel	API for Mixpanel
2018-01-10	Seurat	Tools for Single Cell Genomics
2018-01-10	shades	Simple Colour Manipulation
2018-01-10	skimr	Compact and Flexible Summaries of Data
2018-01-10	streamMOA	Interface for MOA Stream Clustering Algorithms
2018-01-10	strider	Strided Iterator and Range
2018-01-10	tadaatoolbox	Helpers for Data Analysis and Presentation Focused on Undergrad Psychology
2018-01-10	tdr	Target Diagram
2018-01-10	UnivRNG	Univariate Pseudo-Random Number Generation
2018-01-09	annovarR	Integrated Framework to Annotate Genetic Variants
2018-01-09	ATR	Alternative Tree Representation
2018-01-09	basicTrendline	Add Trendline of Basic Regression Models to Plot
2018-01-09	bullwhipgame	Bullwhip Effect Demo in Shiny
2018-01-09	CAST	'caret' Applications for Spatial-Temporal Models
2018-01-09	easySVG	An Easy SVG Basic Elements Generator
2018-01-09	elevatr	Access Elevation Data from Various APIs
2018-01-09	formulize	Add Formula Interfaces to Modelling Functions
2018-01-09	glmmsr	Fit a Generalized Linear Mixed Model
2018-01-09	googlePolylines	Encoding Coordinates into 'Google' Polylines
2018-01-09	gRapHD	Efficient Selection of Undirected Graphical Models for High-Dimensional Datasets
2018-01-09	grf	Generalized Random Forests (Beta)
2018-01-09	heims	Decode and Validate HEIMS Data from Department of Education, Australia
2018-01-09	LinkedMatrix	Column-Linked and Row-Linked Matrices
2018-01-09	MatchIt	Nonparametric Preprocessing for Parametric Causal Inference
2018-01-09	NLMR	Simulating Neutral Landscape Models
2018-01-09	OpVaR	Statistical Methods for Modeling Operational Risk
2018-01-09	osmose	Object Oriented Simulator of Marine Ecosystems
2018-01-09	packcircles	Circle Packing
2018-01-09	PCDimension	Finding the Number of Significant Principal Components
2018-01-09	pmap	Process Map Visualization
2018-01-09	ranger	A Fast Implementation of Random Forests
2018-01-09	Rbgs	Reading and Background Subtraction in Videos
2018-01-09	rclimateca	Fetch Climate Data from Environment Canada
2018-01-09	rENA	Epistemic Network Analysis
2018-01-09	reticulate	Interface to 'Python'
2018-01-09	RGBM	LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction
2018-01-09	rgdax	Wrapper for 'GDAX' Cryptocurrency Exchange
2018-01-09	rlme	Rank-Based Estimation and Prediction in Random Effects Nested Models
2018-01-09	SNPknock	Knockoffs for Hidden Markov Models and Genomic Data
2018-01-09	sommer	Solving Mixed Model Equations in R
2018-01-09	tsibble	Tidy Temporal Data Frames and Tools
2018-01-09	univOutl	Detection of Univariate Outliers
2018-01-09	visNetwork	Network Visualization using 'vis.js' Library
2018-01-09	walker	Bayesian Regression with Time-Varying Coefficients
2018-01-09	xpose	Diagnostics for Pharmacometric Models
2018-01-08	afex	Analysis of Factorial Experiments
2018-01-08	BioInstaller	Lightweight Biology Software Installer
2018-01-08	boral	Bayesian Ordination and Regression AnaLysis
2018-01-08	clam	Classical Age-Depth Modelling of Cores from Deposits
2018-01-08	comorbidity	Computing Comorbidity Scores
2018-01-08	comparer	Compare Output and Run Time
2018-01-08	constants	Reference on Constants, Units and Uncertainty
2018-01-08	crochet	Implementation Helper for [ and [<- Of Custom Matrix-Like Types
2018-01-08	csv	Read and Write CSV Files with Selected Conventions
2018-01-08	dprint	Print Tabular Data to Graphics Device
2018-01-08	dynsbm	Dynamic Stochastic Block Models
2018-01-08	factoptd	Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments
2018-01-08	fastDummies	Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
2018-01-08	gtWAS	Genome and Transcriptome Wide Association Study
2018-01-08	KSgeneral	Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution
2018-01-08	microbenchmark	Accurate Timing Functions
2018-01-08	mistat	Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti
2018-01-08	netrankr	Analyzing Partial Rankings in Networks
2018-01-08	NNS	Nonlinear Nonparametric Statistics
2018-01-08	officer	Manipulation of Microsoft Word and PowerPoint Documents
2018-01-08	ordinalClust	Ordinal Data Clustering, Co-Clustering and Classification
2018-01-08	pmml	Generate PMML for Various Models
2018-01-08	praznik	Collection of Information-Based Feature Selection Filters
2018-01-08	quotedargs	A Way of Writing Functions that Quote their Arguments
2018-01-08	rCBA	CBA Classifier for R
2018-01-08	ReporteRs	Microsoft Word and PowerPoint Documents Generation
2018-01-08	ReporteRsjars	External Jars Required for Package 'ReporteRs'
2018-01-08	sgee	Stagewise Generalized Estimating Equations
2018-01-08	shinyjs	Easily Improve the User Experience of Your Shiny Apps in Seconds
2018-01-08	simstudy	Simulation of Study Data
2018-01-08	solvebio	The Official SolveBio API Client
2018-01-08	spanish	Translate Quantities from Strings Spelled in Spanish to Integer
2018-01-08	SQRL	Database Query Interfaces
2018-01-08	survivalsvm	Survival Support Vector Analysis
2018-01-08	TropFishR	Tropical Fisheries Analysis
2018-01-08	trtf	Transformation Trees and Forests
2018-01-08	TSEtools	Download and Manage Data from Tehran Stock Exchange
2018-01-08	units	Measurement Units for R Vectors
2018-01-08	viridis	Default Color Maps from 'matplotlib'
2018-01-08	xptr	Manipulating External Pointer
2018-01-08	zoo	S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations)
2018-01-07	actuar	Actuarial Functions and Heavy Tailed Distributions
2018-01-07	ExplainPrediction	Explanation of Predictions for Classification and Regression Models
2018-01-07	fingerprint	Functions to Operate on Binary Fingerprint Data
2018-01-07	fold	A Self-Describing Dataset Format and Interface
2018-01-07	gets	General-to-Specific (GETS) Modelling and Indicator Saturation Methods
2018-01-07	grove	Wavelet Functional ANOVA Through Markov Groves
2018-01-07	MAINT.Data	Model and Analyse Interval Data
2018-01-07	micemd	Multiple Imputation by Chained Equations with Multilevel Data
2018-01-07	PhenotypeSimulator	Flexible Phenotype Simulation from Different Genetic and Noise Models
2018-01-07	RmarineHeatWaves	Detect Marine Heat Waves and Marine Cold Spells
2018-01-07	rms	Regression Modeling Strategies
2018-01-07	Rnightlights	Satellite Nightlight Data Extraction
2018-01-07	RWeka	R/Weka Interface
2018-01-07	RWekajars	R/Weka Interface Jars
2018-01-07	tidytext	Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
2018-01-06	arfima	Fractional ARIMA (and Other Long Memory) Time Series Modeling
2018-01-06	chillR	Statistical Methods for Phenology Analysis in Temperate Fruit Trees
2018-01-06	chron	Chronological Objects which can Handle Dates and Times
2018-01-06	data.tree	General Purpose Hierarchical Data Structure
2018-01-06	date	Functions for Handling Dates
2018-01-06	DPpackage	Bayesian Nonparametric Modeling in R
2018-01-06	DRR	Dimensionality Reduction via Regression
2018-01-06	fmbasics	Financial Market Building Blocks
2018-01-06	lessR	Less Code, More Results
2018-01-06	libsoc	Read, Create and Write 'PharmML' Standard Output (so) XML Files
2018-01-06	LTRCtrees	Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data
2018-01-06	MetFns	Analysis of Visual Meteor Data
2018-01-06	qlcData	Processing Data for Quantitative Language Comparison (QLC)
2018-01-06	SciViews	SciViews - Main package
2018-01-06	sf	Simple Features for R
2018-01-06	sylly	Hyphenation and Syllable Counting for Text Analysis
2018-01-06	synthpop	Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
2018-01-06	testthis	Utils and 'RStudio' Addins to Make Testing Even More Fun
2018-01-05	APPEstimation	Adjusted Prediction Model Performance Estimation
2018-01-05	BayesGOF	Bayesian Modeling via Goodness of Fit
2018-01-05	bda	Density Estimation for Grouped Data
2018-01-05	BDgraph	Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
2018-01-05	binst	Data Preprocessing, Binning for Classification and Regression
2018-01-05	bReeze	Functions for Wind Resource Assessment
2018-01-05	coindeskr	Access 'CoinDesk' Bitcoin Price Index API
2018-01-05	CREAM	Clustering of Genomic Regions Analysis Method
2018-01-05	dbplot	Simplifies Plotting Data Inside Databases
2018-01-05	diffusion	Forecast the Diffusion of New Products
2018-01-05	DNetFinder	Estimating Differential Networks under Semiparametric Gaussian Graphical Models
2018-01-05	ellipse	Functions for Drawing Ellipses and Ellipse-Like Confidence Regions
2018-01-05	fdrDiscreteNull	False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions
2018-01-05	filesstrings	Handy File and String Manipulation
2018-01-05	generalCorr	Generalized Correlations and Initial Causal Path
2018-01-05	getTBinR	Get WHO Tuberculosis Data
2018-01-05	GPM	Gaussian Process Modeling of Multi-Response Datasets
2018-01-05	hmi	Hierarchical Multiple Imputation
2018-01-05	jtools	Analysis and Presentation of Social Scientific Data
2018-01-05	languagelayeR	Access the 'languagelayer' API
2018-01-05	LearnGeom	Learning Plane Geometry
2018-01-05	MAPA	Multiple Aggregation Prediction Algorithm
2018-01-05	MatManlyMix	Matrix Clustering with Gaussian and Manly Mixture Models
2018-01-05	measuRing	Detection and Control of Tree-Ring Widths on Scanned Image Sections
2018-01-05	metacoder	Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data
2018-01-05	mombf	Moment and Inverse Moment Bayes Factors
2018-01-05	MomTrunc	Moments of Folded and Doubly Truncated Multivariate Distributions
2018-01-05	mplot	Graphical Model Stability and Variable Selection Procedures
2018-01-05	mra	Mark-Recapture Analysis
2018-01-05	msaenet	Multi-Step Adaptive Estimation Methods for Sparse Regressions
2018-01-05	paramlink	Parametric Linkage and Other Pedigree Analysis in R
2018-01-05	PartCensReg	Partially Censored Regression Models Based on Heavy-Tailed Distributions
2018-01-05	pbdSLAP	Programming with Big Data – Scalable Linear Algebra Packages
2018-01-05	phuse	Web Application Framework for 'PhUSE' Scripts
2018-01-05	PracTools	Tools for Designing and Weighting Survey Samples
2018-01-05	probout	Unsupervised Multivariate Outlier Probabilities for Large Datasets
2018-01-05	profile	Read, Manipulate, and Write Profiler Data
2018-01-05	psychmeta	Psychometric Meta-Analysis Toolkit
2018-01-05	ramchoice	Estimation and Inference in Random Attention Models
2018-01-05	rapidraker	Rapid Automatic Keyword Extraction (RAKE) Algorithm
2018-01-05	refinr	Cluster and Merge Similar Values Within a Character Vector
2018-01-05	relSim	Relative Simulator
2018-01-05	remoter	Remote R: Control a Remote R Session from a Local One
2018-01-05	rmumps	Wrapper for MUMPS Library
2018-01-05	RRreg	Correlation and Regression Analyses for Randomized Response Data
2018-01-05	ruler	Tidy Data Validation Reports
2018-01-05	RVAideMemoire	Testing and Plotting Procedures for Biostatistics
2018-01-05	sfdct	Constrained Triangulation for Simple Features
2018-01-05	SpatialExtremes	Modelling Spatial Extremes
2018-01-05	taxlist	Handling Taxonomic Lists
2018-01-05	tint	'tint' is not 'Tufte'
2018-01-05	trajr	Animal Trajectory Analysis
2018-01-05	unitedR	Assessment and Evaluation of Formations in United
2018-01-05	walmartAPI	Walmart Open API Wrapper
2018-01-05	washdata	Urban Water and Sanitation Survey Dataset
2018-01-05	wavefunction	Wave Function Representation of Real Distributions
2018-01-05	ziphsmm	Zero-Inflated Poisson Hidden (Semi-)Markov Models
2018-01-04	afCEC	Active Function Cross-Entropy Clustering
2018-01-04	analogsea	Interface to 'Digital Ocean'
2018-01-04	bayesLopod	Bayesian Inference of Landscape Occupancy from Presence-Only Data
2018-01-04	bestNormalize	Normalizing Transformation Functions
2018-01-04	chngpt	Estimation and Hypothesis Testing for Threshold Regression
2018-01-04	codep	Multiscale Codependence Analysis
2018-01-04	coefplot	Plots Coefficients from Fitted Models
2018-01-04	cometExactTest	Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
2018-01-04	CORElearn	Classification, Regression and Feature Evaluation
2018-01-04	coxme	Mixed Effects Cox Models
2018-01-04	crs	Categorical Regression Splines
2018-01-04	CsChange	Testing for Change in C-Statistic
2018-01-04	CUFF	Charles's Utility Function using Formula
2018-01-04	dad	Three-Way Data Analysis Through Densities
2018-01-04	dendroTools	Linear and Nonlinear Methods for Analyzing Dendroclimatological Data
2018-01-04	detrendr	Detrend Images
2018-01-04	DoseFinding	Planning and Analyzing Dose Finding Experiments
2018-01-04	ensembleEN	Ensembling Regularized Linear Models
2018-01-04	extraDistr	Additional Univariate and Multivariate Distributions
2018-01-04	fastrtext	'fastText' Wrapper for Text Classification and Word Representation
2018-01-04	FishResp	An Analytical Tool for Aquatic Respirometry
2018-01-04	fmdates	Financial Market Date Calculations
2018-01-04	GFD	Tests for General Factorial Designs
2018-01-04	git2r	Provides Access to Git Repositories
2018-01-04	gjam	Generalized Joint Attribute Modeling
2018-01-04	gWidgets2RGtk2	Implementation of gWidgets2 for the RGtk2 Package
2018-01-04	gWidgetsRGtk2	Toolkit Implementation of gWidgets for RGtk2
2018-01-04	ipft	Indoor Positioning Fingerprinting Toolset
2018-01-04	janitor	Simple Tools for Examining and Cleaning Dirty Data
2018-01-04	KFAS	Kalman Filter and Smoother for Exponential Family State Space Models
2018-01-04	kofdata	Get Data from the 'KOF Datenservice' API
2018-01-04	kstIO	Knowledge Space Theory Input/Output
2018-01-04	LCAvarsel	Variable Selection for Latent Class Analysis
2018-01-04	lhs	Latin Hypercube Samples
2018-01-04	lmvar	Linear Regression with Non-Constant Variances
2018-01-04	LSDsensitivity	Sensitivity Analysis Tools for LSD
2018-01-04	memo	In-Memory Caching for Repeated Computations
2018-01-04	MSCMT	Multivariate Synthetic Control Method Using Time Series
2018-01-04	mvnfast	Fast Multivariate Normal and Student's t Methods
2018-01-04	ngstk	Next-Generation Sequencing (NGS) Data Analysis Toolkit
2018-01-04	pbdMPI	Programming with Big Data – Interface to MPI
2018-01-04	PCMRS	Model Response Styles in Partial Credit Models
2018-01-04	ppclust	Probabilistic and Possibilistic Cluster Analysis
2018-01-04	proxy	Distance and Similarity Measures
2018-01-04	R.cache	Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations
2018-01-04	RcppAlgos	Tools for Combinatorics and Computational Mathematics
2018-01-04	RcppCNPy	Read-Write Support for 'NumPy' Files via 'Rcpp'
2018-01-04	RCurl	General Network (HTTP/FTP/...) Client Interface for R
2018-01-04	rioja	Analysis of Quaternary Science Data
2018-01-04	rmetasim	An Individual-Based Population Genetic Simulation Environment
2018-01-04	rmpw	Causal Mediation Analysis Using Weighting Approach
2018-01-04	Rnumerai	Interface to the Numerai Machine Learning Tournament API
2018-01-04	rptR	Repeatability Estimation for Gaussian and Non-Gaussian Data
2018-01-04	shadow	Geometric Shadow Calculations
2018-01-04	simmer	Discrete-Event Simulation for R
2018-01-04	SparseDC	Implementation of SparseDC Algorithm
2018-01-04	spind	Spatial Methods and Indices
2018-01-04	stacomiR	Fish Migration Monitoring
2018-01-04	tidystringdist	String Distance Calculation with Tidy Data Principles
2018-01-04	tigris	Load Census TIGER/Line Shapefiles
2018-01-04	visvow	A Tool for the Visualization of Vowel Variation
2018-01-03	attempt	Easy Condition Handling
2018-01-03	Ball	Statistical Inference and Sure Independence Screening via Ball Statistics
2018-01-03	BIGL	Biochemically Intuitive Generalized Loewe Model
2018-01-03	BinNonNor	Data Generation with Binary and Continuous Non-Normal Components
2018-01-03	biogas	Process Biogas Data and Predict Biogas Production
2018-01-03	Biolinv	Modelling and Forecasting Biological Invasions
2018-01-03	biomartr	Genomic Data Retrieval
2018-01-03	bsamGP	Bayesian Spectral Analysis Models using Gaussian Process Priors
2018-01-03	burnr	Fire-History Analysis in R
2018-01-03	CATkit	Chronomics Analysis Toolkit (CAT): Periodicity Analysis
2018-01-03	CINNA	Deciphering Central Informative Nodes in Network Analysis
2018-01-03	CMplot	Circle Manhattan Plot
2018-01-03	compound.Cox	Estimation, Gene Selection, and Survival Prediction Based on the Compound Covariate Method Under the Cox Model
2018-01-03	ConvergenceClubs	Finding Convergence Clubs
2018-01-03	dbplyr	A 'dplyr' Back End for Databases
2018-01-03	DeLorean	Estimates Pseudotimes for Single Cell Expression Data
2018-01-03	discgolf	Discourse API Client
2018-01-03	dlsem	Distributed-Lag Linear Structural Equation Models
2018-01-03	encode	Represent Ordered Lists and Pairs as Strings
2018-01-03	ether	Interaction with the 'Ethereum' Blockchain
2018-01-03	ExtremeBounds	Extreme Bounds Analysis (EBA)
2018-01-03	forecastHybrid	Convenient Functions for Ensemble Time Series Forecasts
2018-01-03	frequencyConnectedness	Spectral Decomposition of Connectedness Measures
2018-01-03	geostatsp	Geostatistical Modelling with Likelihood and Bayes
2018-01-03	ggformula	Formula Interface to the Grammar of Graphics
2018-01-03	hBayesDM	Hierarchical Bayesian Modeling of Decision-Making Tasks
2018-01-03	Hmisc	Harrell Miscellaneous
2018-01-03	httping	'Ping' 'URLs' to Time 'Requests'
2018-01-03	huxtable	Simply Create LaTeX and HTML Tables
2018-01-03	inctools	Incidence Estimation Tools
2018-01-03	kst	Knowledge Space Theory
2018-01-03	kyotil	Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies
2018-01-03	LSDinterface	Reading LSD Results (.res) Files
2018-01-03	ltsk	Local Time Space Kriging
2018-01-03	macleish	Retrieve Data from MacLeish Field Station
2018-01-03	mcca	Multi-Category Classification Accuracy
2018-01-03	mekko	Variable Width Bar Charts: Bar Mekko
2018-01-03	MESS	Miscellaneous Esoteric Statistical Scripts
2018-01-03	MetaLandSim	Landscape and Range Expansion Simulation
2018-01-03	miRNAss	Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
2018-01-03	mixlm	Mixed Model ANOVA and Statistics for Education
2018-01-03	mobForest	Model Based Random Forest Analysis
2018-01-03	mongolite	Fast and Simple 'MongoDB' Client for R
2018-01-03	naivebayes	High Performance Implementation of the Naive Bayes Algorithm
2018-01-03	oaxaca	Blinder-Oaxaca Decomposition
2018-01-03	odr	Optimal Design and Statistical Power of Multilevel Randomized Trials
2018-01-03	pangaear	Client for the 'Pangaea' Database
2018-01-03	PKNCA	Perform Pharmacokinetic Non-Compartmental Analysis
2018-01-03	PoisBinNonNor	Data Generation with Poisson, Binary and Continuous Components
2018-01-03	PoisBinOrd	Data Generation with Poisson, Binary and Ordinal Components
2018-01-03	provenance	Statistical Toolbox for Sedimentary Provenance Analysis
2018-01-03	PUlasso	High-Dimensional Variable Selection with Presence-Only Data
2018-01-03	qualvar	Implements Indices of Qualitative Variation Proposed by Wilcox (1973)
2018-01-03	rbacon	Age-Depth Modelling using Bayesian Statistics
2018-01-03	RcmdrMisc	R Commander Miscellaneous Functions
2018-01-03	RcmdrPlugin.NMBU	R Commander Plug-in for University Level Applied Statistics
2018-01-03	Rdimtools	Dimension Reduction and Estimation Methods
2018-01-03	rdrobust	Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs
2018-01-03	reinforcelearn	Reinforcement Learning
2018-01-03	RobustGaSP	Robust Gaussian Stochastic Process Emulation
2018-01-03	ropenaq	Accesses Air Quality Data from the Open Data Platform OpenAQ
2018-01-03	rprojroot	Finding Files in Project Subdirectories
2018-01-03	Rsampletrees	MCMC Sampling of Gene Genealogies Conditional on Genetic Data
2018-01-03	rsq	R-Squared and Related Measures
2018-01-03	RtutoR	Shiny Apps for Plotting and Exploratory Analysis
2018-01-03	searchConsoleR	Google Search Console R Client
2018-01-03	SemiCompRisks	Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data
2018-01-03	sofa	Connector to 'CouchDB'
2018-01-03	spData	Datasets for Spatial Analysis
2018-01-03	stargazer	Well-Formatted Regression and Summary Statistics Tables
2018-01-03	tibbletime	Time Aware Tibbles
2018-01-03	tidytree	A Tidy Tool for Phylogenetic Tree Data Manipulation
2018-01-03	trend	Non-Parametric Trend Tests and Change-Point Detection
2018-01-03	TSstudio	Tools for Time Series Analysis and Forecasting
2018-01-03	utf8	Unicode Text Processing
2018-01-03	wbstats	Programmatic Access to Data and Statistics from the World Bank API
2018-01-03	woeR	Weight of Evidence Based Segmentation of a Variable
2018-01-03	wordcloud2	Create Word Cloud by 'htmlwidget'
2018-01-03	xwf	Extrema-Weighted Feature Extraction
2018-01-02	APML0	Augmented and Penalized Minimization Method L0
2018-01-02	elasticsearchr	A Lightweight Interface for Interacting with Elasticsearch from R
2018-01-02	eulerr	Area-Proportional Euler and Venn Diagrams with Circles or Ellipses
2018-01-02	HydeNet	Hybrid Bayesian Networks Using R and JAGS
2018-01-02	mlrMBO	A Toolbox for Model-Based Optimization of Expensive Black-Box Functions
2018-01-02	tidycensus	Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames
2017-12-27	knitr	A General-Purpose Package for Dynamic Report Generation in R
2017-12-27	PBSmodelling	GUI Tools Made Easy: Interact with Models and Explore Data
2017-12-27	RcppThread	R-Friendly Threading in C++
2017-12-25	MASS	Support Functions and Datasets for Venables and Ripley's MASS
2017-12-25	PakPC2017	Pakistan Population Census 2017
2017-12-24	ciTools	Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models
2017-12-23	addreg	Additive Regression for Discrete Data
2017-12-23	covTestR	Covariance Matrix Tests
2017-12-23	CytobankBridgeR	Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application
2017-12-23	rtdists	Response Time Distributions
2017-12-22	conformalClassification	Transductive and Inductive Conformal Predictions for Classification Problems
2017-12-22	dgo	Dynamic Estimation of Group-Level Opinion
2017-12-22	edgarWebR	SEC Filings Access
2017-12-22	healthcareai	Tools for Healthcare Machine Learning
2017-12-22	hydroscoper	Interface to Hydroscope
2017-12-22	pKSEA	Prediction-Based Kinase-Substrate Enrichment Analysis
2017-12-22	reReg	Recurrent Event Regression
2017-12-22	rust	Ratio-of-Uniforms Simulation with Transformation
2017-12-22	spam	SPArse Matrix
2017-12-22	spectacles	Storing, Manipulating and Analysis Spectroscopy and Associated Data
2017-12-21	alphashape3d	Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud
2017-12-21	archiDART	Plant Root System Architecture Analysis Using DART and RSML Files
2017-12-21	bdsmatrix	Routines for Block Diagonal Symmetric Matrices
2017-12-21	BioCircos	Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'
2017-12-21	boxcoxmix	Response Transformations for Random Effect and Variance Component Models
2017-12-21	BullsEyeR	Topic Modelling
2017-12-21	ePCR	Ensemble Penalized Cox Regression for Survival Prediction
2017-12-21	EValue	Sensitivity Analyses for Unmeasured Confounding in Observational Studies and Meta-Analyses
2017-12-21	fdcov	Analysis of Covariance Operators
2017-12-21	fractal	A Fractal Time Series Modeling and Analysis Package
2017-12-21	ggspectra	Extensions to 'ggplot2' for Radiation Spectra
2017-12-21	grapherator	A Modular Multi-Step Graph Generator
2017-12-21	labelVector	Label Attributes for Atomic Vectors
2017-12-21	lme4	Linear Mixed-Effects Models using 'Eigen' and S4
2017-12-21	OptSig	Optimal Level of Significance for Regression and Other Statistical Tests
2017-12-21	PairedData	Paired Data Analysis
2017-12-21	PBIBD	Partially Balanced Incomplete Block Designs
2017-12-21	propagate	Propagation of Uncertainty
2017-12-21	RBesT	R Bayesian Evidence Synthesis Tools
2017-12-21	rlang	Functions for Base Types and Core R and 'Tidyverse' Features
2017-12-21	robis	Ocean Biogeographic Information System (OBIS) Client
2017-12-21	RSocrata	Download or Upload 'Socrata' Data Sets
2017-12-21	rstanarm	Bayesian Applied Regression Modeling via Stan
2017-12-21	rstantools	Tools for Developing R Packages Interfacing with 'Stan'
2017-12-21	samplesizeCMH	Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test
2017-12-21	seaaroundus	Sea Around Us API Wrapper
2017-12-21	simmer.plot	Plotting Methods for 'simmer'
2017-12-21	SimRVPedigree	Simulate Pedigrees Ascertained for a Rare Disease
2017-12-21	simtimer	Datetimes as Integers for Discrete-Event Simulations
2017-12-21	slam	Sparse Lightweight Arrays and Matrices
2017-12-21	spam64	64-Bit Extension of the SPArse Matrix R Package 'spam'
2017-12-21	sparseEigen	Computation of Sparse Eigenvectors of a Matrix
2017-12-21	swatches	Read, Inspect, and Manipulate Color Swatch Files
2017-12-21	Ternary	A Package to Generate Ternary Plots
2017-12-21	TrioSGL	Trio Model with a Combination of Lasso and Group Lasso Regularization
2017-12-21	wikitaxa	Taxonomic Information from 'Wikipedia'
2017-12-21	wtss	An R Client for a Web Time-Series Service
2017-12-20	AnthropMMD	An R-Shiny Application for Smith's Mean Measure of Divergence (MMD)
2017-12-20	BayesianTools	General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
2017-12-20	bhm	Biomarker Threshold Models
2017-12-20	circlize	Circular Visualization
2017-12-20	configr	An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML)
2017-12-20	dataPreparation	Automated Data Preparation
2017-12-20	datoramar	Interface to the 'Datorama' API
2017-12-20	dfoptim	Derivative-Free Optimization
2017-12-20	ecm	Build Error Correction Models
2017-12-20	fmriqa	Functional MRI Quality Assurance Routines
2017-12-20	GAS	Generalized Autoregressive Score Models
2017-12-20	gllvm	Generalized Linear Latent Variable Models
2017-12-20	GWmodel	Geographically-Weighted Models
2017-12-20	HMP	Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
2017-12-20	inpdfr	Analyse Text Documents Using Ecological Tools
2017-12-20	kgc	Koeppen-Geiger Climatic Zones
2017-12-20	MCDA	Functions to Support the Multicriteria Decision Aiding Process
2017-12-20	mdsr	Complement to 'Modern Data Science with R'
2017-12-20	memisc	Management of Survey Data and Presentation of Analysis Results
2017-12-20	MonoPoly	Functions to Fit Monotone Polynomials
2017-12-20	NetworkToolbox	Network Filtering Methods and Measures
2017-12-20	nparACT	Non-Parametric Measures of Actigraphy Data
2017-12-20	OGI	Objective General Index
2017-12-20	picasso	Pathwise Calibrated Sparse Shooting Algorithm
2017-12-20	pinbasic	Fast and Stable Estimation of the Probability of Informed Trading (PIN)
2017-12-20	qrnn	Quantile Regression Neural Network
2017-12-20	remotes	R Package Installation from Remote Repositories, Including 'GitHub'
2017-12-20	rmonad	A Monadic Pipeline System
2017-12-20	RPostgres	'Rcpp' Interface to 'PostgreSQL'
2017-12-20	rxylib	Import XY-Data into R
2017-12-20	SimCop	Simulate from Arbitrary Copulae
2017-12-20	theseus	Analysis and Visualization Tools for Microbial Community Data
2017-12-20	widgetframe	'Htmlwidgets' in Responsive 'iframes'
2017-12-20	xts	eXtensible Time Series
2017-12-19	ABPS	The Abnormal Blood Profile Score to Detect Blood Doping
2017-12-19	bridgesampling	Bridge Sampling for Marginal Likelihoods and Bayes Factors
2017-12-19	CBPS	Covariate Balancing Propensity Score
2017-12-19	checkpoint	Install Packages from Snapshots on the Checkpoint Server for Reproducibility
2017-12-19	deisotoper	Detection of Isotope Pattern of a Mass Spectrometric Measurement
2017-12-19	dtwclust	Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance
2017-12-19	fitur	Fit Univariate Distributions
2017-12-19	GeDS	Geometrically Designed Spline Regression
2017-12-19	ggiraph	Make 'ggplot2' Graphics Interactive
2017-12-19	gProfileR	Interface to the 'g:Profiler' Toolkit
2017-12-19	ijtiff	TIFF I/O for 'ImageJ' Users
2017-12-19	iprior	Regression Modelling using I-Priors
2017-12-19	labelled	Manipulating Labelled Data
2017-12-19	LaplacesDemon	Complete Environment for Bayesian Inference
2017-12-19	msde	Bayesian Inference for Multivariate Stochastic Differential Equations
2017-12-19	partitionComparison	Implements Measures for the Comparison of Two Partitions
2017-12-19	PathSelectMP	Backwards Variable Selection for Paths using M Plus
2017-12-19	quantregForest	Quantile Regression Forests
2017-12-19	reda	Recurrent Event Data Analysis
2017-12-19	rhmmer	Utilities Parsing 'HMMER' Results
2017-12-19	rhymer	Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words
2017-12-19	stplanr	Sustainable Transport Planning
2017-12-19	taxa	Taxonomic Classes
2017-12-19	tis	Time Indexes and Time Indexed Series
2017-12-19	tmbstan	MCMC Sampling from 'TMB' Model Object using 'Stan'
2017-12-19	withr	Run Code 'With' Temporarily Modified Global State
2017-12-19	ZOIP	ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression
2017-12-18	adephylo	Exploratory Analyses for the Phylogenetic Comparative Method
2017-12-18	AIG	Automatic Item Generator
2017-12-18	basefun	Infrastructure for Computing with Basis Functions
2017-12-18	BASiNET	Classification of mRNA and lncRNA Sequences using Complex Network Theory
2017-12-18	bootsPLS	Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
2017-12-18	Canopy	Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
2017-12-18	driftR	Drift Correcting Water Quality Data
2017-12-18	fst	Lightning Fast Serialization of Data Frames for R
2017-12-18	gmfd	Inference and Clustering of Functional Data
2017-12-18	kernelboot	Smoothed Bootstrap and Random Generation from Kernel Densities
2017-12-18	kimisc	Kirill's Miscellaneous Functions
2017-12-18	miceadds	Some Additional Multiple Imputation Functions, Especially for 'mice'
2017-12-18	MortCast	Estimation and Projection of Age-Specific Mortality Rates
2017-12-18	mudfold	Multiple UniDimensional unFOLDing
2017-12-18	partykit	A Toolkit for Recursive Partytioning
2017-12-18	photobiology	Photobiological Calculations
2017-12-18	polyPK	The Pharmacokinetics (PK) of Multi-Component Drugs Using a Metabolomics Approach
2017-12-18	qqplotr	Quantile-Quantile Plot Extensions for 'ggplot2'
2017-12-18	sft	Functions for Systems Factorial Technology Analysis of Data
2017-12-18	SpatialBall	Spatial NBA Visualization and Analysis
2017-12-18	spelling	Tools for Spell Checking in R
2017-12-18	textrank	Summarize Text by Ranking Sentences and Finding Keywords
2017-12-18	Umatrix	Visualization of Structures in High-Dimensional Data
2017-12-18	worldmet	Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD)
2017-12-18	xtensor	Headers for the 'xtensor' Library
2017-12-17	AmesHousing	The Ames Iowa Housing Data
2017-12-17	bayeslm	Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors
2017-12-17	CoClust	Copula Based Cluster Analysis
2017-12-17	cowplot	Streamlined Plot Theme and Plot Annotations for 'ggplot2'
2017-12-17	fdasrvf	Elastic Functional Data Analysis
2017-12-17	ForecastComb	Forecast Combination Methods
2017-12-17	FreeSortR	Free Sorting Data Analysis
2017-12-17	littler	R at the Command-Line via 'r'
2017-12-17	mlapi	Abstract Classes for Building 'scikit-learn' Like API
2017-12-17	neatmaps	Heatmaps for Multiple Network Data
2017-12-17	PKPDmisc	Pharmacokinetic and Pharmacodynamic Data Management Functions
2017-12-17	pomp	Statistical Inference for Partially Observed Markov Processes
2017-12-17	REBayes	Empirical Bayes Estimation and Inference
2017-12-17	SegCorr	Detecting Correlated Genomic Regions
2017-12-17	stringformattr	Dynamic String Formatting
2017-12-17	SyncRNG	A Synchronized Tausworthe RNG for R and Python
2017-12-17	zonator	Utilities for Zonation Spatial Conservation Prioritization Software
2017-12-16	cleanEHR	The Critical Care Clinical Data Processing Tools
2017-12-16	dexter	Data Management and Analysis of Tests
2017-12-16	diveMove	Dive Analysis and Calibration
2017-12-16	drat	'Drat' R Archive Template
2017-12-16	getCRUCLdata	Use and Explore CRU CL v. 2.0 Climatology Elements in R
2017-12-16	gofastr	Fast DocumentTermMatrix and TermDocumentMatrix Creation
2017-12-16	HardyWeinberg	Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
2017-12-16	hunspell	High-Performance Stemmer, Tokenizer, and Spell Checker
2017-12-16	multiplex	Algebraic Tools for the Analysis of Multiple Social Networks
2017-12-16	qicharts2	Quality Improvement Charts
2017-12-16	Select	Determines Species Probabilities Based on Functional Traits
2017-12-15	ade4	Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
2017-12-15	adegraphics	An S4 Lattice-Based Package for the Representation of Multivariate Data
2017-12-15	antaresViz	Antares Visualizations
2017-12-15	astsa	Applied Statistical Time Series Analysis
2017-12-15	batchtools	Tools for Computation on Batch Systems
2017-12-15	BClustLonG	A Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data
2017-12-15	bioinactivation	Simulation of Dynamic Microbial Inactivation
2017-12-15	BisRNA	Analysis of RNA Cytosine-5 Methylation
2017-12-15	bomrang	Australian Government Bureau of Meteorology Data from R
2017-12-15	cit	Causal Inference Test
2017-12-15	clustEff	Clusters of Effects Curves in Quantile Regression Models
2017-12-15	earth	Multivariate Adaptive Regression Splines
2017-12-15	ecp	Non-Parametric Multiple Change-Point Analysis of Multivariate Data
2017-12-15	EMSC	Extended Multiplicative Signal Correction
2017-12-15	evtree	Evolutionary Learning of Globally Optimal Trees
2017-12-15	FedData	Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
2017-12-15	gimme	Group Iterative Multiple Model Estimation
2017-12-15	GMAC	Genomic Mediation Analysis with Adaptive Confounding Adjustment
2017-12-15	GSODR	Global Surface Summary of the Day (GSOD) Weather Data from R
2017-12-15	hypercube	Organizing Data in a Hypercube
2017-12-15	icesAdvice	Functions Related to ICES Advice
2017-12-15	ipumsr	Read 'IPUMS' Extract Files
2017-12-15	irtoys	A Collection of Functions Related to Item Response Theory (IRT)
2017-12-15	optiSel	Optimum Contribution Selection and Population Genetics
2017-12-15	plsVarSel	Variable Selection in Partial Least Squares
2017-12-15	PPforest	Projection Pursuit Classification Forest
2017-12-15	quantregRanger	Quantile Regression Forests for 'ranger'
2017-12-15	sim1000G	Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes
2017-12-15	spMaps	Europe SpatialPolygonsDataFrame Builder
2017-12-15	storr	Simple Key Value Stores
2017-12-15	VeryLargeIntegers	Store and Manage Arbitrarily Large Integers
2017-12-15	wallace	A Modular Platform for Reproducible Modeling of Species Niches and Distributions
2017-12-15	woeBinning	Supervised Weight of Evidence Binning of Numeric Variables and Factors
2017-12-15	xmrr	Generate XMR Control Chart Data from Time-Series Data
2017-12-14	antaresProcessing	Antares Results Processing
2017-12-14	childhoodmortality	Calculating Childhood Mortality Rates
2017-12-14	clickstream	Analyzes Clickstreams Based on Markov Chains
2017-12-14	elo	Elo Ratings
2017-12-14	exprso	Rapid Deployment of Machine Learning Algorithms
2017-12-14	gge	Genotype Plus Genotype-by-Environment Biplots
2017-12-14	gravity	Estimation Methods for Gravity Models
2017-12-14	hsdar	Manage, Analyse and Simulate Hyperspectral Data
2017-12-14	humanleague	Synthetic Population Generator
2017-12-14	mizer	Multi-Species sIZE Spectrum Modelling in R
2017-12-14	multipanelfigure	Infrastructure to Assemble Multi-Panel Figures (from Grobs)
2017-12-14	PBNPA	Permutation Based Non-Parametric Analysis of CRISPR Screen Data
2017-12-14	phmm	Proportional Hazards Mixed-Effects Model (PHMM)
2017-12-14	polymapR	Linkage Analysis in Outcrossing Polyploids
2017-12-14	PooledMeanGroup	Pooled Mean Group Estimation of Dynamic Heterogenous Panels
2017-12-14	RSNPset	Efficient Score Statistics for Genome-Wide SNP Set Analysis
2017-12-14	semtree	Recursive Partitioning for Structural Equation Models
2017-12-14	spAddins	A Set of RStudio Addins
2017-12-14	spatgraphs	Graph Edge Computations for Spatial Point Patterns
2017-12-14	sRDA	Sparse Redundancy Analysis
2017-12-14	stopwords	Multilingual Stopword Lists
2017-12-14	submax	Effect Modification in Observational Studies Using the Submax Method
2017-12-14	syuzhet	Extracts Sentiment and Sentiment-Derived Plot Arcs from Text
2017-12-14	tweedie	Evaluation of Tweedie Exponential Family Models
2017-12-13	backports	Reimplementations of Functions Introduced Since R-3.0.0
2017-12-13	binaryLogic	Binary Logic
2017-12-13	corpustools	Managing, Querying and Analyzing Tokenized Text
2017-12-13	doSNOW	Foreach Parallel Adaptor for the 'snow' Package
2017-12-13	GENEAsphere	Visualisation of Raw or Segmented Accelerometer Data
2017-12-13	GJRM	Generalised Joint Regression Modelling
2017-12-13	hysteresis	Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
2017-12-13	LAGOSNE	Interface to the Lake Multi-Scaled Geospatial and Temporal Database
2017-12-13	lexRankr	Extractive Summarization of Text with the LexRank Algorithm
2017-12-13	libcoin	Linear Test Statistics for Permutation Inference
2017-12-13	liftr	Containerize R Markdown Documents
2017-12-13	ltmle	Longitudinal Targeted Maximum Likelihood Estimation
2017-12-13	MAGNAMWAR	A Pipeline for Meta-Genome Wide Association
2017-12-13	mexhaz	Mixed Effect Excess Hazard Models
2017-12-13	party	A Laboratory for Recursive Partytioning
2017-12-13	pccc	Pediatric Complex Chronic Conditions
2017-12-13	POPdemog	Plot Population Demographic History
2017-12-13	rcongresso	Wraps the API for the Brazilian Chamber of Deputies
2017-12-13	Rdpack	Update and Manipulate Rd Documentation Objects
2017-12-13	RIA	Radiomics Image Analysis Toolbox for Grayscale Images
2017-12-13	RVowpalWabbit	R Interface to the Vowpal Wabbit
2017-12-13	SensoMineR	Sensory Data Analysis
2017-12-13	spectrolab	Class and Methods for Hyperspectral Data
2017-12-13	testthat	Unit Testing for R
2017-12-12	blogdown	Create Blogs and Websites with R Markdown
2017-12-12	ChemoSpec	Exploratory Chemometrics for Spectroscopy
2017-12-12	control	A Control Systems Toolbox
2017-12-12	corpus	Text Corpus Analysis
2017-12-12	curl	A Modern and Flexible Web Client for R
2017-12-12	dobson	Data from the GLM Book by Dobson and Barnett
2017-12-12	doMC	Foreach Parallel Adaptor for 'parallel'
2017-12-12	EpiStats	Tools for Epidemiologists
2017-12-12	exampletestr	Help for Writing Unit Tests Based on Function Examples
2017-12-12	foreach	Provides Foreach Looping Construct for R
2017-12-12	fscaret	Automated Feature Selection from 'caret'
2017-12-12	fsdaR	Robust Data Analysis Through Monitoring and Dynamic Visualization
2017-12-12	iMRMC	Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics)
2017-12-12	inum	Interval and Enum-Type Representation of Vectors
2017-12-12	iterators	Provides Iterator Construct for R
2017-12-12	jagsUI	A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
2017-12-12	logiBin	Binning Variables to Use in Logistic Regression
2017-12-12	mazealls	Generate Recursive Mazes
2017-12-12	mlt	Most Likely Transformations
2017-12-12	mlt.docreg	Most Likely Transformations: Documentation and Regression Tests
2017-12-12	mmapcharr	Memory-Map Character Files
2017-12-12	mschart	Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents
2017-12-12	NanoStringNorm	Normalize NanoString miRNA and mRNA Data
2017-12-12	numform	Tools to Format Numbers for Publication
2017-12-12	prettycode	Pretty Print R Code in the Terminal
2017-12-12	ProFit	Fit Projected 2D Profiles to Galaxy Images
2017-12-12	profvis	Interactive Visualizations for Profiling R Code
2017-12-12	rddapp	Regression Discontinuity Design Application
2017-12-12	rmcfs	The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery
2017-12-12	Rnets	Resistance Relationship Networks using Graphical LASSO
2017-12-12	rscorecard	A Method to Download Department of Education College Scorecard Data
2017-12-12	secrlinear	Spatially Explicit Capture-Recapture for Linear Habitats
2017-12-12	sets	Sets, Generalized Sets, Customizable Sets and Intervals
2017-12-12	stpp	Space-Time Point Pattern Simulation, Visualisation and Analysis
2017-12-12	textreadr	Read Text Documents into R
2017-12-12	XiMpLe	A Simple XML Tree Parser and Generator
2017-12-12	yaml	Methods to Convert R Data to YAML and Back
2017-12-11	catlearn	Formal Psychological Models of Categorization and Learning
2017-12-11	DBItest	Testing 'DBI' Back Ends
2017-12-11	descriptr	Generate Descriptive Statistics & Explore Statistical Distributions
2017-12-11	DescTools	Tools for Descriptive Statistics
2017-12-11	dyncomp	Complexity of Short and Coarse-Grained Time Series
2017-12-11	ECharts2Shiny	Embedding Interactive Charts Generated with ECharts Library into Shiny Applications
2017-12-11	epiR	Tools for the Analysis of Epidemiological Data
2017-12-11	europepmc	R Interface to the Europe PubMed Central RESTful Web Service
2017-12-11	filling	Matrix Completion, Imputation, and Inpainting Methods
2017-12-11	fitteR	Fit Hundreds of Theoretical Distributions to Empirical Data
2017-12-11	gamlss	Generalised Additive Models for Location Scale and Shape
2017-12-11	gamlss.dist	Distributions for Generalized Additive Models for Location Scale and Shape
2017-12-11	glmmTMB	Generalized Linear Mixed Models using Template Model Builder
2017-12-11	gMCP	Graph Based Multiple Comparison Procedures
2017-12-11	imp4p	Imputation for Proteomics
2017-12-11	incR	Analysis of Incubation Data
2017-12-11	inferr	Inferential Statistics
2017-12-11	isoph	Isotonic Proportional Hazards Model
2017-12-11	junr	Access Open Data Through the 'Junar' API
2017-12-11	Knoema	Interface to the Knoema API
2017-12-11	matrixsampling	Simulations of Matrix Variate Distributions
2017-12-11	mdsOpt	Searching for Optimal MDS Procedure for Metric and Interval-Valued Symbolic Data
2017-12-11	minimaxdesign	Minimax and Minimax Projection Designs
2017-12-11	MultiplierDEA	Multiplier Data Envelopment Analysis and Cross Efficiency
2017-12-11	nnfor	Time Series Forecasting with Neural Networks
2017-12-11	OpenMPController	Control Number of OpenMP Threads Dynamically
2017-12-11	recurse	Computes Revisitation Metrics for Trajectory Data
2017-12-11	ReIns	Functions from "Reinsurance: Actuarial and Statistical Aspects"
2017-12-11	reshape2	Flexibly Reshape Data: A Reboot of the Reshape Package
2017-12-11	RMariaDB	Database Interface and 'MariaDB' Driver
2017-12-11	snplist	Tools to Create Gene Sets
2017-12-11	styler	Non-Invasive Pretty Printing of R Code
2017-12-11	support	Support Points
2017-12-11	survivalMPL	Penalised Maximum Likelihood for Survival Analysis Models
2017-12-11	symbolicDA	Analysis of Symbolic Data
2017-12-11	TMB	Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
2017-12-10	Brundle	Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data
2017-12-10	caret	Classification and Regression Training
2017-12-10	ContaminatedMixt	Model-Based Clustering and Classification with the Multivariate Contaminated Normal Distribution
2017-12-10	diffobj	Diffs for R Objects
2017-12-10	dynCorr	Dynamic Correlation Package
2017-12-10	ESTER	Efficient Sequential Testing with Evidence Ratios
2017-12-10	expss	Tables with Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
2017-12-10	JMcmprsk	Joint Models for Longitudinal Measurements and Competing Risks Failure Time Data
2017-12-10	KenSyn	Knowledge Synthesis in Agriculture - From Experimental Network to Meta-Analysis
2017-12-10	meaRtools	Micro-Electro Array (MEA) Analysis
2017-12-10	pdSpecEst	An Analysis Toolbox for Hermitian Positive Definite Matrices
2017-12-10	phylotools	Phylogenetic Tools for Eco-Phylogenetics
2017-12-10	quantmod	Quantitative Financial Modelling Framework
2017-12-10	refset	Subsets with Reference Semantics
2017-12-10	rpostgis	R Interface to a 'PostGIS' Database
2017-12-10	RSNNS	Neural Networks using the Stuttgart Neural Network Simulator (SNNS)
2017-12-10	s2	Google's S2 Library for Geometry on the Sphere
2017-12-10	tabularaster	Tidy Tools for 'Raster' Data
2017-12-10	yaImpute	Nearest Neighbor Observation Imputation and Evaluation Tools
2017-12-09	EFAutilities	Utility Functions for Exploratory Factor Analysis
2017-12-09	lifecontingencies	Financial and Actuarial Mathematics for Life Contingencies
2017-12-09	parsemsf	Parse ThermoFisher MSF Files and Estimate Protein Abundances
2017-12-09	TDA	Statistical Tools for Topological Data Analysis
2017-12-08	arsenal	An Arsenal of 'R' Functions for Large-Scale Statistical Summaries
2017-12-08	broman	Karl Broman's R Code
2017-12-08	CLME	Constrained Inference for Linear Mixed Effects Models
2017-12-08	ecotox	Analysis of Ecotoxicology
2017-12-08	iheatmapr	Interactive, Complex Heatmaps
2017-12-08	jomo	Multilevel Joint Modelling Multiple Imputation
2017-12-08	LEGIT	Latent Environmental & Genetic InTeraction (LEGIT) Model
2017-12-08	logitnorm	Functions for the Logitnormal Distribution
2017-12-08	momentuHMM	Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models
2017-12-08	NetworkDistance	Distance Measures for Networks
2017-12-08	penaltyLearning	Penalty Learning
2017-12-08	ProFound	Photometry Tools
2017-12-08	randomcoloR	Generate Attractive Random Colors
2017-12-08	rpf	Response Probability Functions
2017-12-08	rsvd	Randomized Singular Value Decomposition
2017-12-08	s20x	Functions for University of Auckland Course STATS 201/208 Data Analysis
2017-12-08	scrm	Simulating the Evolution of Biological Sequences
2017-12-08	snowflakes	Random Snowflake Generator
2017-12-08	spatialEco	Spatial Analysis and Modelling
2017-12-08	tvR	Total Variation Regularization
2017-12-08	UniDOE	Uniform Design of Experiments
2017-12-08	vcfR	Manipulate and Visualize VCF Data
2017-12-08	WARN	Weaning Age Reconstruction with Nitrogen Isotope Analysis
2017-12-08	xray	X Ray Vision on your Datasets
2017-12-07	bayesDP	Tools for the Bayesian Discount Prior Function
2017-12-07	bea.R	Bureau of Economic Analysis API
2017-12-07	Compind	Composite Indicators Functions
2017-12-07	controlTest	Quantile Comparison for Two-Sample Right-Censored Survival Data
2017-12-07	DOBAD	Analysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains
2017-12-07	EpiILM	Spatial and Network Based Individual Level Models for Epidemics
2017-12-07	EpiILMCT	Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
2017-12-07	FixedPoint	Algorithms for Finding Fixed Point Vectors of Functions
2017-12-07	GetDFPData	Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System
2017-12-07	HistDAWass	Histogram-Valued Data Analysis
2017-12-07	icenReg	Regression Models for Interval Censored Data
2017-12-07	jpndistrict	Create Japanese Administration Area and Office Maps
2017-12-07	LabourMarketAreas	Identification, Tuning, Visualisation and Analysis of Labour Market Areas
2017-12-07	manipulateWidget	Add Even More Interactivity to Interactive Charts
2017-12-07	matdist	Matrix Variate Distributions
2017-12-07	MazamaSpatialUtils	Spatial Data Download and Utility Functions
2017-12-07	MMDai	Multivariate Multinomial Distribution Approximation and Imputation for Incomplete Data
2017-12-07	oddsratio	Odds Ratio Calculation for GAM(M)s & GLM(M)s
2017-12-07	PlackettLuce	Plackett-Luce Models for Rankings
2017-12-07	plotrix	Various Plotting Functions
2017-12-07	Rlinsolve	Iterative Solvers for (Sparse) Linear System of Equations
2017-12-07	sampleSelection	Sample Selection Models
2017-12-07	togglr	'Toggl.com' Api for 'Rstudio'
2017-12-06	asnipe	Animal Social Network Inference and Permutations for Ecologists
2017-12-06	BoSSA	A Bunch of Structure and Sequence Analysis
2017-12-06	CPMCGLM	Correction of the P-Value after Multiple Coding in Generalized Linear Models
2017-12-06	cubing	Rubik's Cube Solving
2017-12-06	dartR	Importing and Analysing Snp and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis
2017-12-06	dlnm	Distributed Lag Non-Linear Models
2017-12-06	earlyR	Estimation of Transmissibility in the Early Stages of a Disease Outbreak
2017-12-06	eha	Event History Analysis
2017-12-06	flipscores	Robust Testing in GLMs
2017-12-06	geniusr	Tools for Working with the 'Genius' API
2017-12-06	gldrm	Generalized Linear Density Ratio Models
2017-12-06	glm.predict	Predicted Values and Discrete Changes for GLM
2017-12-06	gTests	Graph-Based Two-Sample Tests
2017-12-06	INLAutils	Utility Functions for 'INLA'
2017-12-06	Inventorymodel	Inventory Models
2017-12-06	ISM	Interpretive Structural Modelling (ISM)
2017-12-06	iterpc	Efficient Iterator for Permutations and Combinations
2017-12-06	JFE	A Menu-Driven GUI for Analyzing and Modelling Data of Just Finance and Econometrics
2017-12-06	kvh	Read/Write Files in Key-Value-Hierarchy Format
2017-12-06	LassoSIR	Sparsed Sliced Inverse Regression via Lasso
2017-12-06	leaflet.minicharts	Mini Charts for Interactive Maps
2017-12-06	MazamaWebUtils	Utility Functions for Building Web Databrowsers
2017-12-06	meme	Create Meme
2017-12-06	meta	General Package for Meta-Analysis
2017-12-06	MetamapsDB	Network Analysis of Metabolic Pathways and Gene Based Assemblies in Metagenomics
2017-12-06	metasens	Advanced Statistical Methods to Model and Adjust for Bias in Meta-Analysis
2017-12-06	netmeta	Network Meta-Analysis using Frequentist Methods
2017-12-06	projections	Project Future Case Incidence
2017-12-06	PSLM2015	Pakistan Social and Living Standards Measurement Survey 2014-15
2017-12-06	RcppArmadillo	'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
2017-12-06	regsem	Regularized Structural Equation Modeling
2017-12-06	tm	Text Mining Package
2017-12-06	TriMatch	Propensity Score Matching of Non-Binary Treatments
2017-12-06	vcd	Visualizing Categorical Data
2017-12-06	wmtsa	Wavelet Methods for Time Series Analysis
2017-12-05	CaDENCE	Conditional Density Estimation Network Construction and Evaluation
2017-12-05	deGradInfer	Parameter Inference for Systems of Differential Equation
2017-12-05	edeaR	Exploratory and Descriptive Event-Based Data Analysis
2017-12-05	eventdataR	Event Data Repository
2017-12-05	foghorn	Summarize CRAN Check Results in the Terminal
2017-12-05	gambin	Fit the Gambin Model to Species Abundance Distributions
2017-12-05	GEVcdn	GEV Conditional Density Estimation Network
2017-12-05	ggimage	Use Image in 'ggplot2'
2017-12-05	ghibli	Studio Ghibli Palette Generator
2017-12-05	hexSticker	Create Hexagon Sticker in R
2017-12-05	HMMEsolver	A Fast Solver for Henderson Mixed Model Equation via Row Operations
2017-12-05	icesTAF	Functions to Support the ICES Transparent Assessment Framework
2017-12-05	lg	Locally Gaussian Distributions: Estimation and Methods
2017-12-05	MBC	Multivariate Bias Correction of Climate Model Outputs
2017-12-05	MetaSubtract	Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results
2017-12-05	miic	Learning Causal or Non-Causal Graphical Models Using Information Theory
2017-12-05	mltools	Machine Learning Tools
2017-12-05	mmpf	Monte-Carlo Methods for Prediction Functions
2017-12-05	monmlp	Multi-Layer Perceptron Neural Network with Optional Monotonicity Constraints
2017-12-05	msm	Multi-State Markov and Hidden Markov Models in Continuous Time
2017-12-05	NHMSAR	Non-Homogeneous Markov Switching Autoregressive Models
2017-12-05	Nonpareil	Metagenome Coverage Estimation and Projections for 'Nonpareil'
2017-12-05	olsrr	Tools for Building OLS Regression Models
2017-12-05	ordinalNet	Penalized Ordinal Regression
2017-12-05	plotrr	Making Visual Exploratory Data Analysis with Nested Data Easier
2017-12-05	R2BayesX	Estimate Structured Additive Regression Models with 'BayesX'
2017-12-05	scatr	Create Scatter Plots with Marginal Density or Box Plots
2017-12-05	sdols	Summarizing Distributions of Latent Structures
2017-12-05	secrdesign	Sampling Design for Spatially Explicit Capture-Recapture
2017-12-05	sglg	Fitting Semi-Parametric Generalized log-Gamma Regression Models
2017-12-05	sptm	SemiParametric Transformation Model Methods
2017-12-05	VARSEDIG	An Algorithm for Morphometric Characters Selection and Statistical Validation in Morphological Taxonomy
2017-12-05	VWPre	Tools for Preprocessing Visual World Data
2017-12-05	x12	Interface to 'X12-ARIMA'/'X13-ARIMA-SEATS' and Structure for Batch Processing of Seasonal Adjustment
2017-12-04	aprof	Amdahl's Profiler, Directed Optimization Made Easy
2017-12-04	BayesVarSel	Bayes Factors, Model Choice and Variable Selection in Linear Models
2017-12-04	biolink	Create Hyperlinks to Biological Databases and Resources
2017-12-04	boclust	A Clustering Method Based on Boosting on Single Attributes
2017-12-04	bupaR	Business Process Analysis in R
2017-12-04	clinDR	Simulation and Analysis Tools for Clinical Dose Response Modeling
2017-12-04	CollapseLevels	Collapses Levels, Computes Information Value and WoE
2017-12-04	colorSpec	Color Calculations with Emphasis on Spectral Data
2017-12-04	combiter	Combinatorics Iterators
2017-12-04	dae	Functions Useful in the Design and ANOVA of Experiments
2017-12-04	easyVerification	Ensemble Forecast Verification for Large Data Sets
2017-12-04	flora	Tools for Interacting with the Brazilian Flora 2020
2017-12-04	GRS.test	GRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation
2017-12-04	jpmesh	Utilities for Japanese Mesh Code
2017-12-04	loa	Lattice Options and Add-Ins
2017-12-04	MALDIquantForeign	Import/Export Routines for 'MALDIquant'
2017-12-04	mazeGen	Elithorn Maze Generator
2017-12-04	mdw	Maximum Diversity Weighting
2017-12-04	mutoss	Unified Multiple Testing Procedures
2017-12-04	mutossGUI	A Graphical User Interface for the MuToss Project
2017-12-04	networkGen	Network Maze Generator
2017-12-04	OSTSC	Over Sampling for Time Series Classification
2017-12-04	parallelDist	Parallel Distance Matrix Computation using Multiple Threads
2017-12-04	processmapR	Construct Process Maps Using Event Data
2017-12-04	rEDM	Applications of Empirical Dynamic Modeling from Time Series
2017-12-04	restriktor	Restricted Statistical Estimation and Inference for Linear Models
2017-12-04	ROptSpace	Matrix Reconstruction from a Few Entries
2017-12-04	Rttf2pt1	'ttf2pt1' Program
2017-12-04	scatterpie	Scatter Pie Plot
2017-12-04	striprtf	Extract Text from RTF File
2017-12-04	xesreadR	Read and Write XES Files
2017-12-03	aggregation	p-Value Aggregation Methods
2017-12-03	coda.base	A Basic Set of Functions for Compositional Data Analysis
2017-12-03	Factoshiny	Perform Factorial Analysis from 'FactoMineR' with a Shiny Application
2017-12-03	hesim	Health-Economic Simulation Modeling and Decision Analysis
2017-12-03	imageData	Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer
2017-12-03	nCal	Nonlinear Calibration
2017-12-03	rcrossref	Client for Various 'CrossRef' 'APIs'
2017-12-03	registry	Infrastructure for R Package Registries
2017-12-03	robustrank	Robust Rank-Based Tests
2017-12-03	rvg	R Graphics Devices for Vector Graphics Output
2017-12-03	secr	Spatially Explicit Capture-Recapture
2017-12-03	tccox	Treatment Choice Cox Model
2017-12-02	EAinference	Estimator Augmentation and Simulation-Based Inference
2017-12-02	generalhoslem	Goodness of Fit Tests for Logistic Regression Models
2017-12-02	phyclust	Phylogenetic Clustering (Phyloclustering)
2017-12-02	rgeopat2	Additional Functions for 'geoPAT' 2.0
2017-12-02	ROI.models.globalOptTests	'ROI' Optimization Problems Based on 'globalOptTests'
2017-12-02	rtypeform	Interface to 'typeform' Results
2017-12-01	C50	C5.0 Decision Trees and Rule-Based Models
2017-12-01	Cubist	Rule- And Instance-Based Regression Modeling
2017-12-01	findpython	Functions to Find an Acceptable Python Binary
2017-12-01	gdpc	Generalized Dynamic Principal Components
2017-12-01	geosapi	GeoServer REST API R Interface
2017-12-01	h2o	R Interface for H2O
2017-12-01	harrietr	Wrangle Phylogenetic Distance Matrices and Other Utilities
2017-12-01	lrgs	Linear Regression by Gibbs Sampling
2017-12-01	magick	Advanced Graphics and Image-Processing in R
2017-12-01	mlbgameday	Tools to Gather Data from Major League Baseball Advanced Media (MLBAM)
2017-12-01	ncmeta	Straightforward 'NetCDF' Metadata
2017-12-01	NestedCategBayesImpute	Modeling and Generating Synthetic Versions of Nested Categorical Data in the Presence of Impossible Combinations
2017-12-01	NetworkInference	Inferring Latent Diffusion Networks
2017-12-01	Numero	Statistical Framework to Define Subgroups in Complex Datasets
2017-12-01	perturbR	Random Perturbation of Count Matrices
2017-12-01	plumber	An API Generator for R
2017-12-01	RDS	Respondent-Driven Sampling
2017-12-01	SetMethods	Functions for Set-Theoretic Multi-Method Research and Advanced QCA
2017-12-01	smbinning	Scoring Modeling and Optimal Binning
2017-12-01	splines2	Regression Spline Functions and Classes
2017-12-01	vegan	Community Ecology Package
2017-12-01	vegan3d	Static and Dynamic 3D Plots for the 'vegan' Package
2017-12-01	velox	Fast Raster Manipulation and Extraction
2017-12-01	whereport	Geolocalization of IATA Codes
2017-12-01	wnl	Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis
2017-11-30	adapr	Implementation of an Accountable Data Analysis Process
2017-11-30	BatchExperiments	Statistical Experiments on Batch Computing Clusters
2017-11-30	BGGE	Bayesian Genomic Linear Models Applied to GE Genome Selection
2017-11-30	bigstatsr	Statistical Tools for Filebacked Big Matrices
2017-11-30	bucky	Bucky's Archive for Data Analysis in the Social Sciences
2017-11-30	clusterSim	Searching for Optimal Clustering Procedure for a Data Set
2017-11-30	constellation	Identify Event Sequences Using Time Series Joins
2017-11-30	excerptr	Excerpt Structuring Comments from Your Code File and Set a Table of Contents
2017-11-30	flexdashboard	R Markdown Format for Flexible Dashboards
2017-11-30	float	32-Bit Floats
2017-11-30	geojsonR	A GeoJson Processing Toolkit
2017-11-30	glinternet	Learning Interactions via Hierarchical Group-Lasso Regularization
2017-11-30	goftte	Goodness-of-Fit for Time-to-Event Data
2017-11-30	lmerTest	Tests in Linear Mixed Effects Models
2017-11-30	MXM	Feature Selection (Including Multiple Solutions) and Bayesian Networks
2017-11-30	nonmemica	Create and Evaluate NONMEM Models in a Project Context
2017-11-30	npregfast	Nonparametric Estimation of Regression Models with Factor-by-Curve Interactions
2017-11-30	oec	Observatory of Economic Complexity API Wrapper and Utility Program
2017-11-30	passport	Travel Smoothly Between Country Name and Code Formats
2017-11-30	SASmarkdown	'SAS' Markdown
2017-11-30	segmented	Regression Models with Break-Points / Change-Points Estimation
2017-11-30	SPOT	Sequential Parameter Optimization Toolbox
2017-11-30	SUMMER	Spatio-Temporal Under-Five Mortality Methods for Estimation
2017-11-30	Thermimage	Thermal Image Analysis
2017-11-30	tidyinftheo	Some Information-Theoretic Functions in the 'Tidy' Style
2017-11-30	TotalCopheneticIndex	Total Cophenetic Index: An R Package to Quantify Tree Balance
2017-11-29	agridat	Agricultural Datasets
2017-11-29	argparse	Command Line Optional and Positional Argument Parser
2017-11-29	beast	Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series
2017-11-29	bmlm	Bayesian Multilevel Mediation
2017-11-29	ccfa	Continuous Counterfactual Analysis
2017-11-29	getopt	C-Like 'getopt' Behavior
2017-11-29	GWSDAT	GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
2017-11-29	hetGP	Heteroskedastic Gaussian Process Modeling and Design under Replication
2017-11-29	lmomPi	(Precipitation) Frequency Analysis and Variability with L-Moments from 'lmom'
2017-11-29	MDSMap	High Density Genetic Linkage Mapping using Multidimensional Scaling
2017-11-29	mirt	Multidimensional Item Response Theory
2017-11-29	MUS	Monetary Unit Sampling and Estimation Methods, Widely Used in Auditing
2017-11-29	mvord	Multivariate Ordinal Regression Models
2017-11-29	NipponMap	Japanese Map Data and Functions
2017-11-29	StrainRanking	Ranking of Pathogen Strains
2017-11-29	streambugs	Parametric Ordinary Differential Equations Model of Growth, Death, and Respiration of Macroinvertebrate and Algae Taxa
2017-11-29	webshot	Take Screenshots of Web Pages
2017-11-28	adehabitat	Analysis of Habitat Selection by Animals
2017-11-28	adehabitatHR	Home Range Estimation
2017-11-28	adehabitatHS	Analysis of Habitat Selection by Animals
2017-11-28	adehabitatLT	Analysis of Animal Movements
2017-11-28	adehabitatMA	Tools to Deal with Raster Maps
2017-11-28	ANN2	Artificial Neural Networks for Anomaly Detection
2017-11-28	asbio	A Collection of Statistical Tools for Biologists
2017-11-28	AssocAFC	Allele Frequency Comparison
2017-11-28	BALCONY	Better ALignment CONsensus analYsis
2017-11-28	BatchJobs	Batch Computing with R
2017-11-28	bayesmeta	Bayesian Random-Effects Meta-Analysis
2017-11-28	coin	Conditional Inference Procedures in a Permutation Test Framework
2017-11-28	CorShrink	Adaptive Shrinkage of Correlation Vectors and Matrices
2017-11-28	cvcrand	Efficient Design and Analysis of Cluster Randomized Trials
2017-11-28	dbmss	Distance-Based Measures of Spatial Structures
2017-11-28	decisionSupport	Quantitative Support of Decision Making under Uncertainty
2017-11-28	Dforest	Decision Forest
2017-11-28	ems	Epimed Solutions Collection for Data Editing, Analysis, and Benchmarking of Health Units
2017-11-28	geometa	Tools for Reading and Writing ISO/OGC Geographic Metadata
2017-11-28	GetHFData	Download and Aggregate High Frequency Trading Data from Bovespa
2017-11-28	GetLattesData	Reading Bibliometric Data from Lattes Platform
2017-11-28	ggFacetSample	Show Large Facet Dimensions by Sampling
2017-11-28	IndepTest	Nonparametric Independence Tests Based on Entropy Estimation
2017-11-28	jointseg	Joint Segmentation of Multivariate (Copy Number) Signals
2017-11-28	knor	Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means
2017-11-28	MoEClust	Parsimonious Model-Based Clustering with Covariates
2017-11-28	mosaic	Project MOSAIC Statistics and Mathematics Teaching Utilities
2017-11-28	mosaicCore	Common Utilities for Other MOSAIC-Family Packages
2017-11-28	Nippon	Japanese Utility Functions and Data
2017-11-28	outbreaker2	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2017-11-28	personalized	Estimation and Validation Methods for Subgroup Identification and Personalized Medicine
2017-11-28	plantecophys	Modelling and Analysis of Leaf Gas Exchange Data
2017-11-28	preference	2-Stage Clinical Trial Design and Analysis
2017-11-28	Sim.DiffProc	Simulation of Diffusion Processes
2017-11-28	Sim.PLFN	Simulation of Piecewise Linear Fuzzy Numbers
2017-11-28	sjmisc	Data and Variable Transformation Functions
2017-11-28	tipr	Tipping Point Analyses
2017-11-28	xltabr	Automatically Write Beautifully Formatted Cross Tabulations/Contingency Tables to Excel
2017-11-27	ballr	Access to Current and Historical Basketball Data
2017-11-27	ceg	Chain Event Graph
2017-11-27	EvolutionaryGames	Important Concepts of Evolutionary Game Theory
2017-11-27	fakemake	Mock the Unix Make Utility
2017-11-27	gap.datasets	Datasets for 'gap'
2017-11-27	geecure	Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations
2017-11-27	highriskzone	Determining and Evaluating High-Risk Zones
2017-11-27	odk	Convert 'ODK' or 'XLSForm' to 'SPSS' Data Frame
2017-11-27	phase1RMD	Repeated Measurement Design for Phase I Clinical Trial
2017-11-27	PNADcIBGE	Downloading, Reading and Analysing PNADc Microdata
2017-11-27	PolynomF	Polynomials in R
2017-11-27	repo	A Data-Centered Data Flow Manager
2017-11-27	simEd	Simulation Education
2017-11-27	skeleSim	Genetic Simulation Engine
2017-11-27	SpatialFloor	Spatial Floor Simulation (Isotropic)
2017-11-27	stapler	Simultaneous Truth and Performance Level Estimation
2017-11-27	TexExamRandomizer	Personalizes and Randomizes Exams Written in 'LaTeX'
2017-11-27	texteffect	Discovering Latent Treatments in Text Corpora and Estimating Their Causal Effects
2017-11-27	trackeR	Infrastructure for Running and Cycling Data from GPS-Enabled Tracking Devices
2017-11-27	tvReg	Time-Varying Coefficients Linear Regression for Single and Multiple Equations
2017-11-27	ukbtools	Manipulate and Explore UK Biobank Data
2017-11-27	voteogram	United States House and Senate Voting Cartogram Generators
2017-11-26	asciiSetupReader	Reads 'SPSS' and 'SAS' Files from ASCII Data Files (.txt) and Setup Files (.sps or .sas)
2017-11-26	EKMCMC	MCMC Procedures for Estimating Enzyme Kinetics Constants
2017-11-26	epitrix	Small Helpers and Tricks for Epidemics Analysis
2017-11-26	errors	Error Propagation for R Vectors
2017-11-26	FarmTest	Factor Adjusted Robust Multiple Testing
2017-11-26	ggalluvial	Alluvial Diagrams in 'ggplot2'
2017-11-26	intrinsicDimension	Intrinsic Dimension Estimation
2017-11-26	mixOmics	Omics Data Integration Project
2017-11-26	pipeGS	Permutation p-Value Estimation for Gene Set Tests
2017-11-26	RAPTOR	Row and Position Tracheid Organizer
2017-11-26	rfoaas	R Interface to 'FOAAS'
2017-11-26	RNiftyReg	Image Registration Using the 'NiftyReg' Library
2017-11-26	shinyaframe	'WebVR' Data Visualizations with 'RStudio Shiny' and 'Mozilla A-Frame'
2017-11-26	wordnet	WordNet Interface
2017-11-25	archivist	Tools for Storing, Restoring and Searching for R Objects
2017-11-25	bamboo	Protein Secondary Structure Prediction Using the Bamboo Method
2017-11-25	commonsMath	JAR Files of the Apache Commons Mathematics Library
2017-11-25	DescToolsAddIns	Some Functions to be Used as Shortcuts in 'RStudio'
2017-11-25	DLMtool	Data-Limited Methods Toolkit
2017-11-25	dynamichazard	Dynamic Hazard Models using State Space Models
2017-11-25	gap	Genetic Analysis Package
2017-11-25	HelpersMG	Tools for Earth Meteorological Analysis
2017-11-25	jmcm	Joint Mean-Covariance Models using 'Armadillo' and S4
2017-11-25	phenology	Tools to Manage a Parametric Function that Describes Phenology
2017-11-25	rscala	Bi-Directional Interface Between 'R' and 'Scala' with Callbacks
2017-11-25	scriptexec	Execute Native Scripts
2017-11-25	sparseHessianFD	Numerical Estimation of Sparse Hessians
2017-11-25	tidyxl	Read Untidy Excel Files
2017-11-24	Aoptbdtvc	A-Optimal Block Designs for Comparing Test Treatments with Controls
2017-11-24	cctools	Tools for the Continuous Convolution Trick in Nonparametric Estimation
2017-11-24	dixon	Nearest Neighbour Contingency Table Analysis
2017-11-24	ecespa	Functions for Spatial Point Pattern Analysis
2017-11-24	galts	Genetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation
2017-11-24	GFGM.copula	Generalized Farlie-Gumbel-Morgenstern Copula
2017-11-24	inferference	Methods for Causal Inference with Interference
2017-11-24	LAM	Some Latent Variable Models
2017-11-24	lime	Local Interpretable Model-Agnostic Explanations
2017-11-24	qle	Simulation-Based Quasi-Likelihood Estimation
2017-11-24	replicatedpp2w	Two-Way ANOVA-Like Method to Analyze Replicated Point Patterns
2017-11-24	Rramas	Matrix Population Models
2017-11-24	SNFtool	Similarity Network Fusion
2017-11-24	STARTS	Functions for the STARTS Model
2017-11-24	tgram	Compute and Plot Tracheidograms
2017-11-24	ThresholdROC	Threshold Estimation
2017-11-24	tmap	Thematic Maps
2017-11-24	tmaptools	Thematic Map Tools
2017-11-24	tscount	Analysis of Count Time Series
2017-11-24	unitizer	Interactive R Unit Tests
2017-11-24	vdmR	Visual Data Mining Tools
2017-11-24	venn	Draw Venn Diagrams
2017-11-23	adjustedcranlogs	Remove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs
2017-11-23	BinaryEPPM	Mean and Variance Modeling of Binary Data
2017-11-23	CopulaDTA	Copula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies
2017-11-23	CorporaCoCo	Corpora Co-Occurrence Comparison
2017-11-23	d3r	'd3.js' Utilities for R
2017-11-23	distcrete	Discrete Distribution Approximations
2017-11-23	ecospat	Spatial Ecology Miscellaneous Methods
2017-11-23	embryogrowth	Tools to Analyze the Thermal Reaction Norm of Embryo Growth
2017-11-23	entropart	Entropy Partitioning to Measure Diversity
2017-11-23	forega	Floating-Point Genetic Algorithms with Statistical Forecast Based Inheritance Operator
2017-11-23	hms	Pretty Time of Day
2017-11-23	iClick	A Button-Based GUI for Financial and Economic Data Analysis
2017-11-23	IDCard	Update Chinese ID Card Number to Eighteen Digits
2017-11-23	joint.Cox	Penalized Likelihood Estimation and Dynamic Prediction under the Joint Frailty-Copula Models Between Tumour Progression and Death for Meta-Analysis
2017-11-23	lawstat	Tools for Biostatistics, Public Policy, and Law
2017-11-23	mgm	Estimating Time-Varying k-Order Mixed Graphical Models
2017-11-23	MHTdiscrete	Multiple Hypotheses Testing for Discrete Data
2017-11-23	mrfDepth	Depth Measures in Multivariate, Regression and Functional Settings
2017-11-23	MVar.pt	Analise multivariada (brazilian portuguese)
2017-11-23	palm	Fitting Point Process Models via the Palm Likelihood
2017-11-23	powdist	Power and Reversal Power Distributions
2017-11-23	RSurvey	Geographic Information System Application
2017-11-23	sirt	Supplementary Item Response Theory Models
2017-11-23	sn	The Skew-Normal and Related Distributions Such as the Skew-t
2017-11-23	TempleMetrics	Estimating Conditional Distributions
2017-11-23	wtest	The W-Test on Genetic Interactions Testing
2017-11-22	benthos	Marine Benthic Ecosystem Analysis
2017-11-22	blscrapeR	An API Wrapper for the Bureau of Labor Statistics (BLS)
2017-11-22	bssm	Bayesian Inference of Non-Linear and Non-Gaussian State Space Models
2017-11-22	Deriv	Symbolic Differentiation
2017-11-22	Directional	Directional Statistics
2017-11-22	dng	Distributions and Gradients
2017-11-22	domino	R Console Bindings for the 'Domino Command-Line Client'
2017-11-22	DVHmetrics	Analyze Dose-Volume Histograms and Check Constraints
2017-11-22	dyads	Dyadic Network Analysis
2017-11-22	fpmoutliers	Frequent Pattern Mining Outliers
2017-11-22	futility	Interim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up
2017-11-22	gamRR	Calculate the RR for the GAM
2017-11-22	ggfan	Summarise a Distribution Through Coloured Intervals
2017-11-22	HiCblock	Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
2017-11-22	KMgene	Gene-Based Association Analysis for Complex Traits
2017-11-22	LCF	Linear Combination Fitting
2017-11-22	LocalControl	Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence
2017-11-22	ManifoldOptim	An R Interface to the 'ROPTLIB' Library for Riemannian Manifold Optimization
2017-11-22	mclust	Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
2017-11-22	nimble	MCMC, Particle Filtering, and Programmable Hierarchical Modeling
2017-11-22	nricens	NRI for Risk Prediction Models with Time to Event and Binary Response Data
2017-11-22	PPCI	Projection Pursuit for Cluster Identification
2017-11-22	prioritizr	Systematic Conservation Prioritization in R
2017-11-22	RcppProgress	An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
2017-11-22	reactR	React Helpers
2017-11-22	RLumModel	Solving Ordinary Differential Equations to Understand Luminescence
2017-11-22	SELF	A Structural Equation Embedded Likelihood Framework for Causal Discovery
2017-11-22	spdep	Spatial Dependence: Weighting Schemes, Statistics and Models
2017-11-22	survClip	Survival Analysis for Pathways
2017-11-22	TipDatingBeast	Using Tip Dates with Phylogenetic Trees in BEAST (Software for Phylogenetic Analysis)
2017-11-22	wTO	Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
2017-11-21	AMIAS	Alternating Minimization Induced Active Set Algorithms
2017-11-21	anMC	Compute High Dimensional Orthant Probabilities
2017-11-21	antaresRead	Import, Manipulate and Explore the Results of an Antares Simulation
2017-11-21	bigpca	PCA, Transpose and Multicore Functionality for 'big.matrix' Objects
2017-11-21	bikedata	Download and Aggregate Data from Public Hire Bicycle Systems
2017-11-21	biofiles	An Interface for GenBank/GenPept Flat Files
2017-11-21	CDM	Cognitive Diagnosis Modeling
2017-11-21	epicontacts	Handling, Visualisation and Analysis of Epidemiological Contacts
2017-11-21	ICRanks	Simultaneous Confidence Intervals for Ranks
2017-11-21	multichull	A Generic Convex-Hull-Based Model Selection Method
2017-11-21	multinets	Multilevel Networks Analysis
2017-11-21	ngram	Fast n-Gram 'Tokenization'
2017-11-21	pracma	Practical Numerical Math Functions
2017-11-21	ragt2ridges	Ridge Estimation of Vector Auto-Regressive (VAR) Processes
2017-11-21	RcppHMM	Rcpp Hidden Markov Model
2017-11-21	RcppTN	Rcpp-Based Truncated Normal Distribution RNG and Family
2017-11-21	rgdal	Bindings for the 'Geospatial' Data Abstraction Library
2017-11-21	rockchalk	Regression Estimation and Presentation
2017-11-21	rsed	Stream Editing
2017-11-21	Smisc	Sego Miscellaneous
2017-11-21	spatstat	Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
2017-11-21	sspse	Estimating Hidden Population Size using Respondent Driven Sampling Data
2017-11-21	trialr	Clinical Trial Designs in 'RStan'
2017-11-21	VennDiagram	Generate High-Resolution Venn and Euler Plots
2017-11-20	bang	Bayesian Analysis, No Gibbs
2017-11-20	basad	Bayesian Variable Selection with Shrinking and Diffusing Priors
2017-11-20	broom	Convert Statistical Analysis Objects into Tidy Data Frames
2017-11-20	carx	Censored Autoregressive Model with Exogenous Covariates
2017-11-20	CommEcol	Community Ecology Analyses
2017-11-20	copBasic	General Bivariate Copula Theory and Many Utility Functions
2017-11-20	Countr	Flexible Univariate Count Models Based on Renewal Processes
2017-11-20	covafillr	Local Polynomial Regression of State Dependent Covariates in State-Space Models
2017-11-20	CVXR	Disciplined Convex Optimization
2017-11-20	evaluator	Information Security Quantified Risk Assessment Toolkit
2017-11-20	fImport	Rmetrics - Importing Economic and Financial Data
2017-11-20	gcdnet	LASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm
2017-11-20	LaF	Fast Access to Large ASCII Files
2017-11-20	ldat	Large Data Sets
2017-11-20	longROC	Time-Dependent Prognostic Accuracy with Multiply Evaluated Bio Markers or Scores
2017-11-20	LPKsample	LP Nonparametric High Dimension K-Sample Comparison
2017-11-20	metamisc	Diagnostic and Prognostic Meta-Analysis
2017-11-20	oompaBase	Class Unions, Matrix Operations, and Color Schemes for OOMPA
2017-11-20	pcr	Analyzing Real-Time Quantitative PCR Data
2017-11-20	PCRedux	Quantitative Polymerase Chain Reaction (qPCR) Machine Learning Helper Tool
2017-11-20	Polychrome	Qualitative Palettes with Many Colors
2017-11-20	pulver	Parallel Ultra-Rapid p-Value Computation for Linear Regression Interaction Terms
2017-11-20	qdap	Bridging the Gap Between Qualitative Data and Quantitative Analysis
2017-11-20	raptr	Representative and Adequate Prioritization Toolkit in R
2017-11-20	RcppEigen	'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library
2017-11-20	siland	Spatial Influence of Landscape
2017-11-20	spatstat.data	Datasets for 'spatstat'
2017-11-20	spatstat.utils	Utility Functions for 'spatstat'
2017-11-20	tm.plugin.factiva	Import Articles from 'Factiva' Using the 'tm' Text Mining Framework
2017-11-19	AWR.Athena	'AWS' Athena 'DBI' Wrapper
2017-11-19	car	Companion to Applied Regression
2017-11-19	EditImputeCont	Simultaneous Edit-Imputation for Continuous Microdata
2017-11-19	FinePop	Fine-Scale Population Analysis
2017-11-19	FlowScreen	Daily Streamflow Trend and Change Point Screening
2017-11-19	InSilicoVA	Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
2017-11-19	ManlyMix	Manly Mixture Modeling and Model-Based Clustering
2017-11-19	rbcb	R Interface to Brazilian Central Bank Web Services
2017-11-19	RcppClassic	Deprecated 'classic' 'Rcpp' 'API'
2017-11-19	reglogit	Simulation-Based Regularized Logistic Regression
2017-11-19	RLT	Reinforcement Learning Trees
2017-11-19	robustlmm	Robust Linear Mixed Effects Models
2017-11-19	tuber	Client for the YouTube API
2017-11-19	uwIntroStats	Descriptive Statistics, Inference, Regression, and Plotting in an Introductory Statistics Course
2017-11-19	wicket	Utilities to Handle WKT Spatial Data
2017-11-19	wiqid	Quick and Dirty Estimates for Wildlife Populations
2017-11-18	easyAHP	Analytic Hierarchy Process (AHP)
2017-11-18	flowDiv	Cytometric Diversity Indices from Gated Data
2017-11-18	ompr.roi	A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI')
2017-11-18	protr	Generating Various Numerical Representation Schemes for Protein Sequences
2017-11-18	RcppHoney	Iterator Based Expression Template Expansion of Standard Operators
2017-11-18	shapes	Statistical Shape Analysis
2017-11-18	sitmo	Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
2017-11-18	treemapify	Draw Treemaps in 'ggplot2'
2017-11-18	warbleR	Streamline Bioacoustic Analysis
2017-11-18	xslt	Extensible Style-Sheet Language Transformations
2017-11-17	ArchaeoChron	Bayesian Modeling of Archaeological Chronologies
2017-11-17	available	Check if the Title of a Package is Available, Appropriate and Interesting
2017-11-17	bnspatial	Spatial Implementation of Bayesian Networks and Mapping
2017-11-17	covatest	Tests on Properties of Space-Time Covariance Functions
2017-11-17	ensembleMOS	Ensemble Model Output Statistics
2017-11-17	extremefit	Estimation of Extreme Conditional Quantiles and Probabilities
2017-11-17	fAsianOptions	Rmetrics - EBM and Asian Option Valuation
2017-11-17	fBasics	Rmetrics - Markets and Basic Statistics
2017-11-17	fExoticOptions	Rmetrics - Pricing and Evaluating Exotic Option
2017-11-17	fExtremes	Rmetrics - Modelling Extreme Events in Finance
2017-11-17	gamreg	Robust and Sparse Regression via Gamma-Divergence
2017-11-17	ggfittext	Fit Text Inside a Box in 'ggplot2'
2017-11-17	googleCloudStorageR	Interface with Google Cloud Storage API
2017-11-17	imfr	Download Data from the International Monetary Fund's Data API
2017-11-17	KnowBR	Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases
2017-11-17	logihist	Combined Graphs for Logistic Regression
2017-11-17	mldr.datasets	R Ultimate Multilabel Dataset Repository
2017-11-17	mpmcorrelogram	Multivariate Partial Mantel Correlogram
2017-11-17	nmfem	NMF-EM Algorithm
2017-11-17	ompr	Model and Solve Mixed Integer Linear Programs
2017-11-17	ores	Connector to the Objective Revision Evaluation Service (ORES)
2017-11-17	ProjectionBasedClustering	Projection Based Clustering
2017-11-17	proPubBills	'ProPublica' U.S. Congress Bills API Wrapper
2017-11-17	protViz	Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
2017-11-17	queuecomputer	Computationally Efficient Queue Simulation
2017-11-17	Relatedness	Maximum Likelihood Estimation of Relatedness using EM Algorithm
2017-11-17	revgeo	Reverse Geocoding with the Photon Geocoder for OpenStreetMap, Google Maps, and Bing
2017-11-17	Rfast	A Collection of Efficient and Extremely Fast R Functions
2017-11-17	Rgretl	Interface to 'gretlcli'
2017-11-17	RHawkes	Renewal Hawkes Process
2017-11-17	rmarkdown	Dynamic Documents for R
2017-11-17	RNeXML	Semantically Rich I/O for the 'NeXML' Format
2017-11-17	sparkavro	Load Avro File into 'Apache Spark'
2017-11-17	spiderbar	Parse and Test Robots Exclusion Protocol Files and Rules
2017-11-17	spotifyr	Pull Track Audio Features from the 'Spotify' Web API
2017-11-17	sppmix	Modeling Spatial Poisson and Related Point Processes
2017-11-17	stringi	Character String Processing Facilities
2017-11-17	survminer	Drawing Survival Curves using 'ggplot2'
2017-11-17	timeSeries	Rmetrics - Financial Time Series Objects
2017-11-17	tsBSS	Blind Source Separation and Supervised Dimension Reduction for Time Series
2017-11-17	userfriendlyscience	Quantitative Analysis Made Accessible
2017-11-17	YPInterimTesting	Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials
2017-11-16	CIEE	Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations
2017-11-16	dequer	Stacks, Queues, and 'Deques' for R
2017-11-16	easyanova	Analysis of Variance and Other Important Complementary Analyses
2017-11-16	epr	Easy Polynomial Regression
2017-11-16	fArma	Rmetrics - Modelling ARMA Time Series Processes
2017-11-16	fAssets	Rmetrics - Analysing and Modelling Financial Assets
2017-11-16	fCopulae	Rmetrics - Bivariate Dependence Structures with Copulae
2017-11-16	fcros	A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
2017-11-16	fGarch	Rmetrics - Autoregressive Conditional Heteroskedastic Modelling
2017-11-16	flatr	Transforms Contingency Tables to Data Frames, and Analyses Them
2017-11-16	fMultivar	Rmetrics - Analysing and Modeling Multivariate Financial Return Distributions
2017-11-16	fNonlinear	Rmetrics - Nonlinear and Chaotic Time Series Modelling
2017-11-16	fOptions	Rmetrics - Pricing and Evaluating Basic Options
2017-11-16	fPortfolio	Rmetrics - Portfolio Selection and Optimization
2017-11-16	fUnitRoots	Rmetrics - Modelling Trends and Unit Roots
2017-11-16	googleLanguageR	Call Google's 'Natural Language' API, 'Cloud Translation' API and 'Cloud Speech' API
2017-11-16	hashmap	The Faster Hash Map
2017-11-16	ICSShiny	ICS via a Shiny Application
2017-11-16	JuliaCall	Seamless Integration Between R and 'Julia'
2017-11-16	learnr	Interactive Tutorials for R
2017-11-16	Matrix	Sparse and Dense Matrix Classes and Methods
2017-11-16	MixedPsy	Statistical Tools for the Analysis of Psychophysical Data
2017-11-16	mkin	Kinetic Evaluation of Chemical Degradation Data
2017-11-16	modest	Model-Based Dose-Escalation Trials
2017-11-16	MSGARCH	Markov-Switching GARCH Models
2017-11-16	Myrrix	Interface to Myrrix. Myrrix is a Complete, Real-Time, Scalable Clustering and Recommender System, Evolved from Apache Mahout
2017-11-16	Myrrixjars	R/Myrrix Interface Jars
2017-11-16	padr	Quickly Get Datetime Data Ready for Analysis
2017-11-16	phenomap	Projecting Satellite-Derived Phenology in Space
2017-11-16	PtProcess	Time Dependent Point Process Modelling
2017-11-16	RNOmni	Omnibus Test for Genetic Association Analysis using the Rank Normal Transformation
2017-11-16	rrecsys	Environment for Evaluating Recommender Systems
2017-11-16	rtweet	Collecting Twitter Data
2017-11-16	SequentialDesign	Observational Database Study Planning using Exact Sequential Analysis for Poisson and Binomial Data
2017-11-16	shinyWidgets	Custom Inputs Widgets for Shiny
2017-11-16	TAM	Test Analysis Modules
2017-11-16	taskscheduleR	Schedule R Scripts and Processes with the Windows Task Scheduler
2017-11-16	texmex	Statistical Modelling of Extreme Values
2017-11-16	thregI	Threshold Regression for Interval-Censored Data with a Cure Rate Option
2017-11-16	timeDate	Rmetrics - Chronological and Calendar Objects
2017-11-16	utility	Construct, Evaluate and Plot Value and Utility Functions
2017-11-16	vennLasso	Variable Selection for Heterogeneous Populations
2017-11-15	arc	Association Rule Classification
2017-11-15	CovTools	Statistical Tools for Covariance Analysis
2017-11-15	easynls	Easy Nonlinear Model
2017-11-15	enc	Portable Tools for 'UTF-8' Character Data
2017-11-15	EurosarcBayes	Bayesian Single Arm Sample Size Calculation Software
2017-11-15	FateID	Quantification of Fate Bias in Multipotent Progenitors
2017-11-15	fBonds	Rmetrics - Pricing and Evaluating Bonds
2017-11-15	fRegression	Rmetrics - Regression Based Decision and Prediction
2017-11-15	fTrading	Rmetrics - Trading and Rebalancing Financial Instruments
2017-11-15	icensBKL	Accompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre
2017-11-15	imbalance	Preprocessing Algorithms for Imbalanced Datasets
2017-11-15	IQCC	Improved Quality Control Charts
2017-11-15	jmvcore	Dependencies for the 'jamovi' Framework
2017-11-15	laGP	Local Approximate Gaussian Process Regression
2017-11-15	logmult	Log-Multiplicative Models, Including Association Models
2017-11-15	Massign	Simple Matrix Construction
2017-11-15	matchMulti	Optimal Multilevel Matching using a Network Algorithm
2017-11-15	meteoland	Landscape Meteorology Tools
2017-11-15	openEBGM	EBGM Scores for Mining Large Contingency Tables
2017-11-15	PlasmaMutationDetector	Tumor Mutation Detection in Plasma
2017-11-15	rFerns	Random Ferns Classifier
2017-11-15	rpicosat	R Bindings for the 'PicoSAT' SAT Solver
2017-11-15	scraEP	Scrape European Parliament Careers
2017-11-15	tactile	New and Extended Plots, Methods, and Panel Functions for 'lattice'
2017-11-15	TOSTER	Two One-Sided Tests (TOST) Equivalence Testing
2017-11-14	bazar	Miscellaneous Basic Functions
2017-11-14	BootValidation	Adjusting for Optimism in 'glmnet' Regression using Bootstrapping
2017-11-14	cdcfluview	Retrieve 'U.S'. Flu Season Data from the 'CDC' 'FluView' Portal
2017-11-14	coop	Co-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations
2017-11-14	crunch	Crunch.io Data Tools
2017-11-14	dataCompareR	Compare Two Data Frames and Summarise the Difference
2017-11-14	dynsurv	Dynamic Models for Survival Data
2017-11-14	ggpubr	'ggplot2' Based Publication Ready Plots
2017-11-14	googleAuthR	Authenticate and Create Google APIs
2017-11-14	ICCbin	Facilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data
2017-11-14	inlabru	Spatial Inference using Integrated Nested Laplace Approximation
2017-11-14	L1pack	Routines for L1 Estimation
2017-11-14	likelihoodExplore	Likelihood Exploration
2017-11-14	memery	Internet Memes for Data Analysts
2017-11-14	ML.MSBD	Maximum Likelihood Inference on Multi-State Trees
2017-11-14	nipals	Principal Components Analysis using NIPALS with Gram-Schmidt Orthogonalization
2017-11-14	oaqc	Computation of the Orbit-Aware Quad Census
2017-11-14	OptimalTiming	Optimal Timing Identification
2017-11-14	popEpi	Functions for Epidemiological Analysis using Population Data
2017-11-14	PreciseSums	Accurate Floating Point Sums and Products
2017-11-14	rpgm	Fast Simulation of Normal/Exponential Random Variables and Stochastic Differential Equations / Poisson Processes
2017-11-14	shinyKGode	An Interactive Application for ODE Parameter Inference Using Gradient Matching
2017-11-14	subsamp	Subsample Winner Algorithm for Variable Selection in Linear Regression with a Large Number of Variables
2017-11-14	systemicrisk	A Toolbox for Systemic Risk
2017-11-14	tidyposterior	Bayesian Analysis to Compare Models using Resampling Statistics
2017-11-14	tidyverse	Easily Install and Load the 'Tidyverse'
2017-11-14	tribe	Play with the Tribe of Attributes
2017-11-14	variosig	Spatial Dependence Based on Empirical Variograms
2017-11-13	ALEPlot	Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots
2017-11-13	ameco	European Commission Annual Macro-Economic (AMECO) Database
2017-11-13	auctestr	Statistical Testing for AUC Data
2017-11-13	Bergm	Bayesian Exponential Random Graph Models
2017-11-13	bootcluster	Bootstrapping Estimates of Clustering Stability
2017-11-13	cartography	Thematic Cartography
2017-11-13	CHNOSZ	Thermodynamic Calculations for Geobiochemistry
2017-11-13	clubSandwich	Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections
2017-11-13	Dasst	Tools for Reading, Processing and Writing 'DSSAT' Files
2017-11-13	dendextend	Extending 'Dendrogram' Functionality in R
2017-11-13	dparser	Port of 'Dparser' Package
2017-11-13	episensr	Basic Sensitivity Analysis of Epidemiological Results
2017-11-13	esc	Effect Size Computation for Meta Analysis
2017-11-13	keyholder	Store Data About Rows
2017-11-13	LSRS	Land Surface Remote Sensing
2017-11-13	MALDIquant	Quantitative Analysis of Mass Spectrometry Data
2017-11-13	multiway	Component Models for Multi-Way Data
2017-11-13	OneArmPhaseTwoStudy	Planning, Conducting, and Analysing Single-Arm Phase II Studies
2017-11-13	osrm	Interface Between R and the OpenStreetMap-Based Routing Service OSRM
2017-11-13	quanteda	Quantitative Analysis of Textual Data
2017-11-13	QuantumClone	Clustering Mutations using High Throughput Sequencing (HTS) Data
2017-11-13	raster	Geographic Data Analysis and Modeling
2017-11-13	rethinker	RethinkDB Client
2017-11-13	sentometrics	An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction
2017-11-13	sparr	Spatial and Spatiotemporal Relative Risk
2017-11-13	StakeholderAnalysis	Measuring Stakeholder Influence
2017-11-13	tables	Formula-Driven Table Generation
2017-11-13	tmuxr	Manage 'tmux'
2017-11-13	ToolsForCoDa	Multivariate Tools for Compositional Data Analysis
2017-11-13	utilsIPEA	IPEA Common Functions
2017-11-13	yasp	String Functions for Compact and Expressive Code
2017-11-12	aire.zmvm	Download Mexico City Pollution, Wind, and Temperature Data
2017-11-12	aqp	Algorithms for Quantitative Pedology
2017-11-12	epitab	Flexible Contingency Tables for Epidemiology
2017-11-12	fuzzyforest	Fuzzy Forests
2017-11-12	ggplotAssist	'RStudio' Addin for Teaching and Learning 'ggplot2'
2017-11-12	incidence	Compute, Handle, Plot and Model Incidence of Dated Events
2017-11-12	mudata2	Interchange Tools for Multi-Parameter Spatiotemporal Data
2017-11-12	narray	Subset- And Name-Aware Array Utility Functions
2017-11-12	nat	NeuroAnatomy Toolbox for Analysis of 3D Image Data
2017-11-12	openNLPdata	Apache OpenNLP Jars and Basic English Language Models
2017-11-12	phytools	Phylogenetic Tools for Comparative Biology (and Other Things)
2017-11-12	prioritizrdata	Conservation Planning Data Sets
2017-11-12	qboxplot	Quantile-Based Boxplot
2017-11-12	rcbalance	Large, Sparse Optimal Matching with Refined Covariate Balance
2017-11-12	rcbsubset	Optimal Subset Matching with Refined Covariate Balance
2017-11-12	rcompanion	Functions to Support Extension Education Program Evaluation
2017-11-12	rgbif	Interface to the Global 'Biodiversity' Information Facility API
2017-11-12	RKEAjars	R/KEA Interface Jars
2017-11-12	robotstxt	A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker
2017-11-12	rsample	General Resampling Infrastructure
2017-11-12	rwalkr	API to Melbourne Pedestrian Data
2017-11-12	SentimentAnalysis	Dictionary-Based Sentiment Analysis
2017-11-12	snnR	Sparse Neural Networks for Genomic Selection in Animal Breeding
2017-11-12	ThankYouStars	Give your Dependencies Stars on GitHub!
2017-11-12	yardstick	Tidy Characterizations of Model Performance
2017-11-12	Zelig	Everyone's Statistical Software
2017-11-11	BatchMap	Software for the Creation of High Density Linkage Maps in Outcrossing Species
2017-11-11	rwunderground	R Interface to Weather Underground API
2017-11-11	sugrrants	Supporting Graphs for Analysing Time Series
2017-11-10	AID	Box-Cox Power Transformation
2017-11-10	airGR	Suite of GR Hydrological Models for Precipitation-Runoff Modelling
2017-11-10	anocva	A Non-Parametric Statistical Test to Compare Clustering Structures
2017-11-10	berryFunctions	Function Collection Related to Plotting and Hydrology
2017-11-10	climwin	Climate Window Analysis
2017-11-10	CoordinateCleaner	Automated Cleaning of Occurrence Records from Biological Collections
2017-11-10	Crossover	Analysis and Search of Crossover Designs
2017-11-10	ctmle	Collaborative Targeted Maximum Likelihood Estimation
2017-11-10	dataMaid	A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
2017-11-10	FactoMineR	Multivariate Exploratory Data Analysis and Data Mining
2017-11-10	geojsonio	Convert Data from and to 'GeoJSON' or 'TopoJSON'
2017-11-10	GWASinlps	Nonlocal Prior Based SNP Selection Tool for Genome-Wide Association Studies
2017-11-10	Infusion	Inference Using Simulation
2017-11-10	IsoplotR	Statistical Toolbox for Radiometric Geochronology
2017-11-10	memuse	Memory Estimation Utilities
2017-11-10	mockery	Mocking Library for R
2017-11-10	openssl	Toolkit for Encryption, Signatures and Certificates Based on OpenSSL
2017-11-10	parSim	Parallel Simulation Studies
2017-11-10	PdPDB	Pattern Discovery in PDB Structures of Metalloproteins
2017-11-10	quokar	Quantile Regression Outlier Diagnostics with K Left Out Analysis
2017-11-10	railtrails	Rail Trail Data for Trails in the United States from the Rails-to-Trails
2017-11-10	rGoodData	GoodData API Client Package
2017-11-10	rLDCP	Text Generation from Data
2017-11-10	rODE	Ordinary Differential Equation (ODE) Solvers Written in R Using S4 Classes
2017-11-10	RStoolbox	Tools for Remote Sensing Data Analysis
2017-11-10	sound	A Sound Interface for R
2017-11-10	spacyr	R Wrapper to the spaCy NLP Library
2017-11-10	StAMPP	Statistical Analysis of Mixed Ploidy Populations
2017-11-09	bigtime	Sparse Estimation of Large Time Series Models
2017-11-09	cjoint	AMCE Estimator for Conjoint Experiments
2017-11-09	devtools	Tools to Make Developing R Packages Easier
2017-11-09	famSKATRC	Family Sequence Kernel Association Test for Rare and Common Variants
2017-11-09	MOST	Multiphase Optimization Strategy
2017-11-09	nesRdata	National Eutrophication Survey Data
2017-11-09	nlmixr	Nonlinear Mixed Effects Models in Population Pharmacokinetics and Pharmacodynamics
2017-11-09	predkmeans	Covariate Adaptive Clustering
2017-11-09	roccv	ROC for Cross Validation Results
2017-11-09	rWishart	Random Wishart Matrix Generation
2017-11-09	SimMultiCorrData	Simulation of Correlated Data with Multiple Variable Types
2017-11-09	TPD	Methods for Measuring Functional Diversity Based on Trait Probability Density
2017-11-09	wNNSel	Weighted Nearest Neighbor Imputation of Missing Values using Selected Variables
2017-11-09	WRSS	Water Resources System Simulator
2017-11-08	condusco	Query-Driven Pipeline Execution and Query Templates
2017-11-08	deepboost	Deep Boosting Ensemble Modeling
2017-11-08	FHtest	Tests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
2017-11-08	geojson	Classes for 'GeoJSON'
2017-11-08	graphon	A Collection of Graphon Estimation Methods
2017-11-08	HIMA	High-Dimensional Mediation Analysis
2017-11-08	intsvy	International Assessment Data Manager
2017-11-08	lintr	A 'Linter' for R Code
2017-11-08	lmomco	L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions
2017-11-08	lsl	Latent Structure Learning
2017-11-08	MittagLeffleR	The Mittag-Leffler Distribution
2017-11-08	MOLHD	Multiple Objective Latin Hypercube Design
2017-11-08	multcomp	Simultaneous Inference in General Parametric Models
2017-11-08	prophet	Automatic Forecasting Procedure
2017-11-08	RcmdrPlugin.GWRM	R Commander Plug-in for Fitting Generalized Waring Regression Models
2017-11-08	REndo	Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables
2017-11-08	RQuantLib	R Interface to the 'QuantLib' Library
2017-11-08	seqHMM	Hidden Markov Models for Life Sequences and Other Multivariate, Multichannel Categorical Time Series
2017-11-07	APCanalysis	Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons
2017-11-07	changepointsHD	Change-Point Estimation for Expensive and High-Dimensional Models
2017-11-07	ClinicalTrialSummary	Summary Measures for Clinical Trials with Survival Outcomes
2017-11-07	covr	Test Coverage for Packages
2017-11-07	EmpiricalCalibration	Routines for Performing Empirical Calibration of Observational Study Estimates
2017-11-07	epxToR	Import 'Epidata' XML Files '.epx'
2017-11-07	ess	Download Data from the European Social Survey on the Fly
2017-11-07	glmm	Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation
2017-11-07	hues	Distinct Colours Palettes Based on 'iwanthue'
2017-11-07	metScanR	Find, Map, and Gather Environmental Data and Metadata
2017-11-07	move	Visualizing and Analyzing Animal Track Data
2017-11-07	oc	Optimal Classification Roll Call Analysis Software
2017-11-07	pcnetmeta	Patient-Centered Network Meta-Analysis
2017-11-07	plm	Linear Models for Panel Data
2017-11-07	RadOnc	Analytical Tools for Radiation Oncology
2017-11-07	rdryad	Access for Dryad Web Services
2017-11-07	Rsymphony	SYMPHONY in R
2017-11-07	sharpr2	Estimating Regulatory Scores and Identifying HiDRA Data
2017-11-07	SiMRiv	Simulating Multistate Movements in River/Heterogeneous Landscapes
2017-11-07	SqlRender	Rendering Parameterized SQL and Translation to Dialects
2017-11-07	switchr	Installing, Managing, and Switching Between Distinct Sets of Installed Packages
2017-11-07	TFisher	Optimal Thresholding Fisher's P-Value Combination Method
2017-11-07	TreeSearch	Phylogenetic Tree Search Using Custom Optimality Criteria
2017-11-07	UniIsoRegression	Unimodal and Isotonic L1, L2 and Linf Regression
2017-11-07	vardpoor	Variance Estimation for Sample Surveys by the Ultimate Cluster Method
2017-11-06	ABCoptim	Implementation of Artificial Bee Colony (ABC) Optimization
2017-11-06	BMisc	Miscellaneous Functions for Panel Data, Quantiles, and Printing Results
2017-11-06	dcminfo	Information Matrix for Diagnostic Classification Models
2017-11-06	devRate	Quantify the Relationship Between Development Rate and Temperature in Ectotherms
2017-11-06	Diderot	Bibliographic Network Analysis
2017-11-06	dslabs	Data Science Labs
2017-11-06	dvmisc	Faster Computation of Common Statistics and Miscellaneous Functions
2017-11-06	enrichwith	Methods to Enrich R Objects with Extra Components
2017-11-06	genoPlotR	Plot Publication-Grade Gene and Genome Maps
2017-11-06	glmpathcr	Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response
2017-11-06	goft	Tests of Fit for some Probability Distributions
2017-11-06	googlePublicData	Working with Google's 'Public Data Explorer' DSPL Metadata Files
2017-11-06	GRANBase	Creating Continuously Integrated Package Repositories from Manifests
2017-11-06	hydrolinks	Hydrologic Network Linking Data and Tools
2017-11-06	hypervolume	High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls
2017-11-06	nowcasting	Nowcast Analysis and Create Real-Time Data Basis
2017-11-06	OpenMx	Extended Structural Equation Modelling
2017-11-06	pCalibrate	Bayesian Calibrations of P-Values
2017-11-06	rcartocolor	'CARTOColors' Palettes
2017-11-06	RcppQuantuccia	R Bindings to the 'Quantuccia' Header-Only Essentials of 'QuantLib'
2017-11-06	servr	A Simple HTTP Server to Serve Static Files or Dynamic Documents
2017-11-06	splm	Econometric Models for Spatial Panel Data
2017-11-06	switchrGist	Publish Package Manifests to GitHub Gists
2017-11-06	tidyselect	Select from a Set of Strings
2017-11-05	approxmatch	Approximately Optimal Fine Balance Matching with Multiple Groups
2017-11-05	ArCo	Artificial Counterfactual Package
2017-11-05	breathteststan	Stan-Based Fit to Gastric Emptying Curves
2017-11-05	cli	Helpers for Developing Command Line Interfaces
2017-11-05	drake	Data Frames in R for Make
2017-11-05	extremeStat	Extreme Value Statistics and Quantile Estimation
2017-11-05	geosphere	Spherical Trigonometry
2017-11-05	gnFit	Goodness of Fit Test for Continuous Distribution Functions
2017-11-05	grex	Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
2017-11-05	lplyr	'dplyr' Verbs for Lists and Other Verbs for Data Frames
2017-11-05	lsmeans	Least-Squares Means
2017-11-05	nomine	Classify Names by Gender, U.S. Ethnicity, and Leaf Nationality
2017-11-05	pdftools	Text Extraction, Rendering and Converting of PDF Documents
2017-11-05	Pstat	Assessing Pst Statistics
2017-11-05	R.utils	Various Programming Utilities
2017-11-05	statip	Statistical Functions for Probability Distributions
2017-11-05	stylo	Stylometric Analyses
2017-11-05	tableHTML	A Tool to Create HTML Tables
2017-11-04	inaparc	Initialization Algorithms for Partitioning Cluster Analysis
2017-11-04	later	Utilities for Delaying Function Execution
2017-11-04	pinp	'pinp' is not 'PNAS'
2017-11-04	TeXCheckR	Parses LaTeX Documents for Errors
2017-11-03	adfExplorer	Import from and Export to Amiga Disk Files
2017-11-03	AnnuityRIR	Annuity Random Interest Rates
2017-11-03	bioset	Convert a Matrix of Raw Values into Nice and Tidy Data
2017-11-03	blackbox	Black Box Optimization and Exploration of Parameter Space
2017-11-03	clipr	Read and Write from the System Clipboard
2017-11-03	convoSPAT	Convolution-Based Nonstationary Spatial Modeling
2017-11-03	CTT	Classical Test Theory Functions
2017-11-03	dief	Metrics for Continuous Efficiency
2017-11-03	dynRB	Dynamic Range Boxes
2017-11-03	GMSE	Generalised Management Strategy Evaluation Simulator
2017-11-03	lcyanalysis	Stock Data Analysis Functions
2017-11-03	lubridate	Make Dealing with Dates a Little Easier
2017-11-03	Metrics	Evaluation Metrics for Machine Learning
2017-11-03	moveVis	Movement Data Visualization
2017-11-03	movMF	Mixtures of von Mises-Fisher Distributions
2017-11-03	mRMRe	Parallelized Minimum Redundancy, Maximum Relevance (mRMR) Ensemble Feature Selection
2017-11-03	patternplot	Versatile Pie Charts, Bar Charts and Box Plots using Patterns, Colors and Images
2017-11-03	PDN	Personalized Disease Network
2017-11-03	pense	Penalized Elastic Net S/MM-Estimator of Regression
2017-11-03	phylopath	Perform Phylogenetic Path Analysis
2017-11-03	pool	Object Pooling
2017-11-03	predatory	Tools for Detecting Predatory Publishers and Journals
2017-11-03	PRIMsrc	PRIM Survival Regression Classification
2017-11-03	PSM	Non-Linear Mixed-Effects Modelling using Stochastic Differential Equations
2017-11-03	rdatacite	'DataCite' Client for 'OAI-PMH' Methods and their Search API
2017-11-03	rdwd	Select and Download Climate Data from 'DWD' (German Weather Service)
2017-11-03	ritis	Integrated Taxonomic Information System Client
2017-11-03	rplos	Interface to the Search 'API' for 'PLoS' Journals
2017-11-03	scoringRules	Scoring Rules for Parametric and Simulated Distribution Forecasts
2017-11-03	SPAtest	Score Test Based on Saddlepoint Approximation
2017-11-03	spatialwarnings	Spatial Early Warning Signals of Ecosystem Degradation
2017-11-03	spew	SPEW Framework for Generating Synthetic Ecosystems
2017-11-03	StepReg	Stepwise Regression Analysis
2017-11-03	topicmodels	Topic Models
2017-11-03	validatetools	Checking and Simplifying Validation Rule Sets
2017-11-03	vmd	Variational Mode Decomposition
2017-11-02	ADMM	Algorithms using Alternating Direction Method of Multipliers
2017-11-02	convevol	Analysis of Convergent Evolution
2017-11-02	DatAssim	Data Assimilation
2017-11-02	emojifont	Emoji and Font Awesome in Graphics
2017-11-02	equateIRT	IRT Equating Methods
2017-11-02	equateMultiple	Equating of Multiple Forms
2017-11-02	FFTrees	Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
2017-11-02	fsthet	Fst-Heterozygosity Smoothed Quantiles
2017-11-02	hnp	Half-Normal Plots with Simulation Envelopes
2017-11-02	l2boost	Friedman's Boosting Algorithm for Regularized Linear Regression
2017-11-02	mapview	Interactive Viewing of Spatial Data in R
2017-11-02	mda	Mixture and Flexible Discriminant Analysis
2017-11-02	Mega2R	Accessing and Processing a 'Mega2' Genetic Database
2017-11-02	meta4diag	Meta-Analysis for Diagnostic Test Studies
2017-11-02	mlmm	Multilevel Model for Multivariate Responses with Missing Values
2017-11-02	mobsim	Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes
2017-11-02	mokken	Conducts Mokken Scale Analysis
2017-11-02	nopp	Nash Optimal Party Positions
2017-11-02	orthoDr	An Orthogonality Constrained Optimization Approach for Semi-Parametric Dimension Reduction Problems
2017-11-02	petro.One	Statistics and Text Mining for Oil and Gas Papers from OnePetro Metadata
2017-11-02	pglm	Panel Generalized Linear Models
2017-11-02	PReMiuM	Dirichlet Process Bayesian Clustering, Profile Regression
2017-11-02	readobj	Fast Reader for 'Wavefront' OBJ 3D Scene Files
2017-11-02	revdbayes	Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
2017-11-02	rhub	Connect to 'R-hub'
2017-11-02	rjmcmc	Reversible-Jump MCMC Using Post-Processing
2017-11-02	RJSplot	Interactive Graphs with R
2017-11-02	Rpolyhedra	Polyhedra Database
2017-11-02	rsdmx	Tools for Reading SDMX Data and Metadata
2017-11-02	SLDAssay	Software for Analyzing Limiting Dilution Assays
2017-11-02	slowraker	A Slow Version of the Rapid Automatic Keyword Extraction (RAKE) Algorithm
2017-11-02	solrium	General Purpose R Interface to 'Solr'
2017-11-02	spass	Study Planning and Adaptation of Sample Size
2017-11-02	stilt	Separable Gaussian Process Interpolation (Emulation)
2017-11-02	Taxonstand	Taxonomic Standardization of Plant Species Names
2017-11-02	TBFmultinomial	TBF Methodology Extension for Multinomial Outcomes
2017-11-02	umx	Structural Equation Modeling in R with 'OpenMx'
2017-11-01	alterryx	An 'API' Client for the 'Alteryx' Gallery
2017-11-01	HiddenMarkov	Hidden Markov Models
2017-11-01	infraFDTD.assist	IO Help for infraFDTD Model
2017-11-01	KraljicMatrix	A Quantified Implementation of the Kraljic Matrix
2017-11-01	mrgsolve	Simulate from ODE-Based Population PK/PD and Systems Pharmacology Models
2017-11-01	multigraph	Plot and Manipulate Multigraphs
2017-11-01	orloca.es	Spanish version of orloca package
2017-11-01	PanJen	A Semi-Parametric Test for Specifying Functional Form
2017-11-01	phangorn	Phylogenetic Reconstruction and Analysis
2017-11-01	questionr	Functions to Make Surveys Processing Easier
2017-11-01	Rcrawler	Web Crawler and Scraper
2017-11-01	respirometry	Tools for Conducting Respirometry Experiments
2017-11-01	robustbase	Basic Robust Statistics
2017-11-01	Rsomoclu	Somoclu
2017-11-01	simule	A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models
2017-11-01	unittest	TAP-Compliant Unit Testing
2017-10-31	elementR	A Set of R6 Classes & a Shiny Application for Reducing Elemental LA-ICPMS Data from Solid Structures
2017-10-31	gapminder	Data from Gapminder
2017-10-31	genlogis	Generalized Logistic Distribution
2017-10-31	gfer	Green Finance and Environmental Risk
2017-10-31	haploR	Query 'HaploReg' and 'RegulomeDB'
2017-10-31	lpme	Nonparametric Estimation of Measurement Error Models
2017-10-31	mclustcomp	Measures for Comparing Clusters
2017-10-31	metricTester	Test Metric and Null Model Statistical Performance
2017-10-31	nodiv	Compares the Distribution of Sister Clades Through a Phylogeny
2017-10-31	QNB	Differential RNA Methylation Analysis for Count-Based Small-Sample Sequencing Data with a Quad-Negative Binomial Model
2017-10-31	rcdk	Interface to the 'CDK' Libraries
2017-10-31	rgeos	Interface to Geometry Engine - Open Source ('GEOS')
2017-10-31	SHELF	Tools to Support the Sheffield Elicitation Framework
2017-10-31	textstem	Tools for Stemming and Lemmatizing Text
2017-10-31	wec	Weighted Effect Coding
2017-10-30	abe	Augmented Backward Elimination
2017-10-30	ape	Analyses of Phylogenetics and Evolution
2017-10-30	bbmle	Tools for General Maximum Likelihood Estimation
2017-10-30	coala	A Framework for Coalescent Simulation
2017-10-30	conover.test	Conover-Iman Test of Multiple Comparisons Using Rank Sums
2017-10-30	dbhydroR	'DBHYDRO' Hydrologic and Water Quality Data
2017-10-30	dodgr	Distances on Directed Graphs
2017-10-30	dynfrail	Fitting Dynamic Frailty Models with the EM Algorithm
2017-10-30	flan	FLuctuation ANalysis on Mutation Models
2017-10-30	JMbayes	Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach
2017-10-30	MBHdesign	Spatial Designs for Ecological and Environmental Surveys
2017-10-30	n1qn1	Port of the 'Scilab' 'n1qn1' Module for Unconstrained BFGS Optimization
2017-10-30	phylocanvas	Interactive Phylogenetic Trees Using the 'Phylocanvas' JavaScript Library
2017-10-30	pryr	Tools for Computing on the Language
2017-10-30	R2admb	'ADMB' to R Interface Functions
2017-10-30	Rduino	A Microcontroller Interface
2017-10-30	reportROC	An Easy Way to Report ROC Analysis
2017-10-30	roadoi	Find Free Versions of Scholarly Publications via the oaDOI Service
2017-10-30	rsurfer	Manipulating 'Freesurfer' Generated Data
2017-10-30	safer	Encrypt and Decrypt Strings, R Objects and Files
2017-10-30	shadowtext	Shadow Text Grob and Layer
2017-10-29	CAISEr	Comparison of Algorithms with Iterative Sample Size Estimation
2017-10-29	clickR	Fix Data and Create Report Tables from Different Objects
2017-10-29	diffusr	Network Diffusion Algorithms
2017-10-29	episode	Estimation with Penalisation in Systems of Ordinary Differential Equations
2017-10-29	FSA	Simple Fisheries Stock Assessment Methods
2017-10-29	glue	Interpreted String Literals
2017-10-29	gridSVG	Export 'grid' Graphics as SVG
2017-10-29	HMMoce	Improved Analysis of Marine Animal Movement Data Using Hidden Markov Models
2017-10-29	lazyeval	Lazy (Non-Standard) Evaluation
2017-10-29	linl	'linl' is not 'Letter'
2017-10-29	mBvs	Bayesian Variable Selection Methods for Multivariate Data
2017-10-29	modmarg	Calculating Marginal Effects and Levels with Errors
2017-10-29	rgen	Random Sampling Distribution C++ Routines for Armadillo
2017-10-29	rpg	Easy Interface to Advanced PostgreSQL Features
2017-10-29	SimDesign	Structure for Organizing Monte Carlo Simulation Designs
2017-10-29	sNPLS	NPLS Regression with L1 Penalization
2017-10-29	spgwr	Geographically Weighted Regression
2017-10-29	SurrogateTest	Early Testing for a Treatment Effect using Surrogate Marker Information
2017-10-29	tidystats	Create a Tidy Statistics Output File
2017-10-29	websearchr	Access Domains and Search Popular Websites
2017-10-28	coppeCosenzaR	COPPE-Cosenza Fuzzy Hierarchy Model
2017-10-28	Evapotranspiration	Modelling Actual, Potential and Reference Crop Evapotranspiration
2017-10-28	inlmisc	Miscellaneous Functions for the USGS INL Project Office
2017-10-28	kokudosuuchi	R Interface to 'Kokudo Suuchi' API
2017-10-28	mctest	Multicollinearity Diagnostic Measures
2017-10-28	nets	Network Estimation for Time Series
2017-10-28	PieceExpIntensity	Bayesian Model to Find Changepoints Based on Rates and Count Data
2017-10-28	RZigZag	Zig-Zag Sampler
2017-10-28	sinew	Create 'roxygen2' Skeleton with Information from Function Script
2017-10-27	AbSim	Time Resolved Simulations of Antibody Repertoires
2017-10-27	asymmetry	Visualizing Asymmetric Data
2017-10-27	data.table	Extension of 'data.frame'
2017-10-27	distdrawr	Download Occurrence Data of Vascular Plants in Germany from the FLORKART Database
2017-10-27	dunn.test	Dunn's Test of Multiple Comparisons Using Rank Sums
2017-10-27	HRM	High-Dimensional Repeated Measures
2017-10-27	lira	LInear Regression in Astronomy
2017-10-27	pixels	Tools for Working with Image Pixels
2017-10-27	Power2Stage	Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
2017-10-27	qualtRics	Download Qualtrics Survey Data Directly into R
2017-10-27	rcreds	Securely Use Credentials Within R Scripts
2017-10-27	rfUtilities	Random Forests Model Selection and Performance Evaluation
2017-10-27	RInno	An Installation Framework for Shiny Apps
2017-10-27	rpsftm	Rank Preserving Structural Failure Time Models
2017-10-27	snpReady	Preparing Genotypic Datasets in Order to Run Genomic Analysis
2017-10-27	swagger	Dynamically Generates Documentation from a 'Swagger' Compliant API
2017-10-27	vfcp	Computation of v Values for U and Copula C(U, v)
2017-10-27	Zseq	Integer Sequence Generator
2017-10-26	BIFIEsurvey	Tools for Survey Statistics in Educational Assessment
2017-10-26	BTLLasso	Modelling Heterogeneity in Paired Comparison Data
2017-10-26	catnet	Categorical Bayesian Network Inference
2017-10-26	census	Scrape US Census Data
2017-10-26	countyfloods	Quantify United States County-Level Flood Measurements
2017-10-26	di	Deficit Index (DI)
2017-10-26	epitools	Epidemiology Tools
2017-10-26	fiery	A Lightweight and Flexible Web Framework
2017-10-26	FinAna	Financial Analysis and Regression Diagnostic Analysis
2017-10-26	kaphom	Test the Homogeneity of Kappa Statistics
2017-10-26	meanr	Sentiment Analysis Scorer
2017-10-26	modifiedmk	Modified Mann Kendall Trend Tests
2017-10-26	nyctaxi	Accessing New York City Taxi Data
2017-10-26	oro.nifti	Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
2017-10-26	routr	A Simple Router for HTTP and WebSocket Requests
2017-10-26	SCMA	Single-Case Meta-Analysis
2017-10-26	SpATS	Spatial Analysis of Field Trials with Splines
2017-10-26	surveyplanning	Survey Planning Tools
2017-10-26	word.alignment	Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation
2017-10-25	actogrammr	Read in Activity Data and Plot Actograms
2017-10-25	asus	Adaptive SURE Thresholding Using Side Information
2017-10-25	camtrapR	Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
2017-10-25	GerminaR	Germination Indexes for Seed Germination Variables for Ecophysiological Studies
2017-10-25	gmeta	Meta-Analysis via a Unified Framework of Confidence Distribution
2017-10-25	hdf5r	Interface to the 'HDF5' Binary Data Format
2017-10-25	IDmining	Intrinsic Dimension for Data Mining
2017-10-25	MEPDF	Multivariate Empirical Density Function
2017-10-25	multitaper	Spectral Analysis Tools using the Multitaper Method
2017-10-25	netdiffuseR	Analysis of Diffusion and Contagion Processes on Networks
2017-10-25	OPI	Open Perimetry Interface
2017-10-25	quantreg	Quantile Regression
2017-10-25	reqres	Powerful Classes for HTTP Requests and Responses
2017-10-25	Runuran	R Interface to the UNU.RAN Random Variate Generators
2017-10-25	spant	MR Spectroscopy Analysis Tools
2017-10-25	unfoldr	Stereological Unfolding for Spheroidal Particles
2017-10-25	WaveletArima	Wavelet ARIMA Model
2017-10-25	WWR	Weighted Win Loss Statistics and their Variances
2017-10-24	autoimage	Multiple Heat Maps for Projected Coordinates
2017-10-24	bigKRLS	Optimized Kernel Regularized Least Squares
2017-10-24	BIS	Programmatic Access to Bank for International Settlements Data
2017-10-24	cbar	Contextual Bayesian Anomaly Detection in R
2017-10-24	checkmate	Fast and Versatile Argument Checks
2017-10-24	comtradr	Interface with the United Nations Comtrade API
2017-10-24	densityClust	Clustering by Fast Search and Find of Density Peaks
2017-10-24	dfpk	Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials
2017-10-24	fbar	An Extensible Approach to Flux Balance Analysis
2017-10-24	frailtyEM	Fitting Frailty Models with the EM Algorithm
2017-10-24	glm2	Fitting Generalized Linear Models
2017-10-24	jsTree	Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
2017-10-24	lexiconPT	Lexicons for Portuguese Text Analysis
2017-10-24	mice	Multivariate Imputation by Chained Equations
2017-10-24	MOEADr	Component-Wise MOEA/D Implementation
2017-10-24	MoLE	Modeling Language Evolution
2017-10-24	nspmix	Nonparametric and Semiparametric Mixture Estimation
2017-10-24	OOBCurve	Out of Bag Learning Curve
2017-10-24	optimization	Flexible Optimization of Complex Loss Functions with State and Parameter Space Constraints
2017-10-24	orloca	Operations Research LOCational Analysis Models
2017-10-24	paramtest	Run a Function Iteratively While Varying Parameters
2017-10-24	Rlibeemd	Ensemble Empirical Mode Decomposition (EEMD) and Its Complete Variant (CEEMDAN)
2017-10-24	rsm	Response-Surface Analysis
2017-10-24	sads	Maximum Likelihood Models for Species Abundance Distributions
2017-10-24	spTDyn	Spatially Varying and Spatio-Temporal Dynamic Linear Models
2017-10-24	subrank	Computes Copula using Ranks and Subsampling
2017-10-24	SubTite	Subgroup Specific Optimal Dose Assignment
2017-10-24	XR	A Structure for Interfaces from R
2017-10-24	XRPython	Structured Interface to 'Python'
2017-10-24	zebu	Local Association Measures
2017-10-23	AzureML	Interface with Azure Machine Learning Datasets, Experiments and Web Services
2017-10-23	bayesPop	Probabilistic Population Projection
2017-10-23	BBMV	Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape
2017-10-23	bigQueryR	Interface with Google BigQuery with Shiny Compatibility
2017-10-23	carfima	Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data
2017-10-23	COMBIA	Synergy/Antagonism Analyses of Drug Combinations
2017-10-23	DBEST	Detecting Breakpoints and Estimating Segments in Trend
2017-10-23	EfficientMaxEigenpair	Efficient Initials for Computing the Maximal Eigenpair
2017-10-23	KGode	Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations
2017-10-23	lsei	Solving Least Squares or Quadratic Programming Problems under Equality/Inequality Constraints
2017-10-23	mem	The Moving Epidemic Method
2017-10-23	MHCtools	Analysis of MHC Data in Non-Model Species
2017-10-23	MlBayesOpt	Hyper Parameter Tuning for Machine Learning, Using Bayesian Optimization
2017-10-23	mpath	Regularized Linear Models
2017-10-23	orcutt	Estimate Procedure in Case of First Order Autocorrelation
2017-10-23	PCAmixdata	Multivariate Analysis of Mixed Data
2017-10-23	Publish	Format Output of Various Routines in a Suitable Way for Reports and Publication
2017-10-23	rgenoud	R Version of GENetic Optimization Using Derivatives
2017-10-23	ROI.plugin.deoptim	'DEoptim' and 'DEoptimR' Plugin for the 'R' Optimization Interface
2017-10-23	TurtleGraphics	Turtle Graphics
2017-10-23	WaveLetLongMemory	Estimating Long Memory Parameter using Wavelet
2017-10-23	zFactor	Calculate the Compressibility Factor 'z' for Hydrocarbon Gases
2017-10-22	BAS	Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling
2017-10-22	cytometree	Automated Cytometry Gating and Annotation
2017-10-22	debugme	Debug R Packages
2017-10-22	docuSignr	Connect to 'DocuSign' API
2017-10-22	dr4pl	Dose Response Data Analysis using the 4 Parameter Logistic (4PL) Model
2017-10-22	GetITRData	Reading Financial Reports from Bovespa's ITR System
2017-10-22	groupdata2	Creating Groups from Data
2017-10-22	growthrates	Estimate Growth Rates from Experimental Data
2017-10-22	hutils	Miscellaneous R Functions and Aliases
2017-10-22	modcmfitr	Fit a Modified Connor-Mosimann Distribution to Elicited Quantiles in Multinomial Problems
2017-10-22	NormalizeMets	Analysis of Metabolomics Data
2017-10-22	oii	Crosstab and Statistical Tests for OII MSc Stats Course
2017-10-22	PCA4you	PCA Plotting in a User Friendly Way
2017-10-22	ROI.plugin.alabama	'alabama' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.ecos	'ECOS' Plugin for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.msbinlp	'Multi-Solution' Binary Linear Problem Plug-in for the 'R' Optimization Interface
2017-10-22	ROI.plugin.nloptr	'nloptr' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.optimx	'optimx' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	ROI.plugin.scs	'SCS' Plug-in for the 'R' Optimization Infrastructure
2017-10-22	sankey	Illustrate the Flow of Information or Material
2017-10-22	sigr	Succinct and Correct Statistical Summaries for Reports
2017-10-22	simecol	Simulation of Ecological (and Other) Dynamic Systems
2017-10-22	subprocess	Manage Sub-Processes in R
2017-10-21	auk	eBird Data Extraction and Processing with AWK
2017-10-21	CANSIM2R	Directly Extracts Complete CANSIM Data Tables
2017-10-21	giphyr	R Interface to the Giphy API
2017-10-21	gmapsdistance	Distance and Travel Time Between Two Points from Google Maps
2017-10-21	hogsvdR	Higher-Order Generalized Singular Value Decomposition
2017-10-21	paleotree	Paleontological and Phylogenetic Analyses of Evolution
2017-10-21	RcmdrPlugin.survival	R Commander Plug-in for the 'survival' Package
2017-10-21	securitytxt	Identify and Parse Web Security Policies Files
2017-10-21	skyscapeR	Skyscape Archaeology Data Reduction, Visualization and Analysis
2017-10-20	accrual	Bayesian Accrual Prediction
2017-10-20	billboarder	Create Interactive Chart with the JavaScript 'Billboard' Library
2017-10-20	datafsm	Estimating Finite State Machine Models from Data
2017-10-20	doFuture	A Universal Foreach Parallel Adaptor using the Future API of the 'future' Package
2017-10-20	DOvalidation	Kernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation
2017-10-20	EHR	Electronic Health Record (EHR) Data Processing and Analysis Tool
2017-10-20	epanet2toolkit	Call 'EPANET' Functions to Simulate Pipe Networks
2017-10-20	genomic.autocorr	Models Dealing with Spatial Dependency in Genomic Data
2017-10-20	georob	Robust Geostatistical Analysis of Spatial Data
2017-10-20	ggmuller	Create Muller Plots of Evolutionary Dynamics
2017-10-20	googleAnalyticsR	Google Analytics API into R
2017-10-20	hNMF	Hierarchical Non-Negative Matrix Factorization
2017-10-20	ISLR	Data for an Introduction to Statistical Learning with Applications in R
2017-10-20	Kpart	Cubic Spline Fitting with Knot Selection
2017-10-20	liteq	Lightweight Portable Message Queue Using 'SQLite'
2017-10-20	miLineage	Association Tests for Microbial Lineages on a Taxonomic Tree
2017-10-20	mortAAR	Analysis of Archaeological Mortality Data
2017-10-20	mvMonitoring	Multi-State Adaptive Dynamic Principal Component Analysis for Multivariate Process Monitoring
2017-10-20	NMOF	Numerical Methods and Optimization in Finance
2017-10-20	nmw	Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics
2017-10-20	OnAge	Test of Between-Group Differences in the Onset of Senescence
2017-10-20	ordinalForest	Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables
2017-10-20	Rcmdr	R Commander
2017-10-20	ROI	R Optimization Infrastructure
2017-10-20	ROI.plugin.cplex	ROI Plug-in CPLEX
2017-10-20	ROI.plugin.glpk	'ROI' Plug-in 'GLPK'
2017-10-20	rospca	Robust Sparse PCA using the ROSPCA Algorithm
2017-10-20	sdcMicro	Statistical Disclosure Control Methods for Anonymization of Microdata and Risk Estimation
2017-10-20	ShortForm	Automatic Short Form Creation
2017-10-20	smapr	Acquisition and Processing of NASA Soil Moisture Active-Passive (SMAP) Data
2017-10-20	webchem	Chemical Information from the Web
2017-10-20	whoami	Username, Full Name, Email Address, 'GitHub' Username of the Current User
2017-10-20	XRJulia	Structured Interface to 'Julia'
2017-10-19	bayesImageS	Bayesian Methods for Image Segmentation using a Potts Model
2017-10-19	bdots	Bootstrapped Differences of Time Series
2017-10-19	CausalGAM	Estimation of Causal Effects with Generalized Additive Models
2017-10-19	ChainLadder	Statistical Methods and Models for Claims Reserving in General Insurance
2017-10-19	condformat	Conditional Formatting in Data Frames
2017-10-19	EasyMx	Easy Model-Builder Functions for 'OpenMx'
2017-10-19	EpiContactTrace	Epidemiological Tool for Contact Tracing
2017-10-19	Gmisc	Descriptive Statistics, Transition Plots, and More
2017-10-19	gtrendsR	Perform and Display Google Trends Queries
2017-10-19	gwrpvr	Genome-Wide Regression P-Value (Gwrpv)
2017-10-19	htm2txt	Convert Html into Text
2017-10-19	mafs	Multiple Automatic Forecast Selection
2017-10-19	monoreg	Bayesian Monotonic Regression Using a Marked Point Process Construction
2017-10-19	multimode	Mode Testing and Exploring
2017-10-19	nlcv	Nested Loop Cross Validation
2017-10-19	rabi	Generate Codes to Uniquely and Robustly Identify Individuals for Animal Behavior Studies
2017-10-19	rex	Friendly Regular Expressions
2017-10-19	rslurm	Submit R Calculations to a Slurm Cluster
2017-10-19	sjPlot	Data Visualization for Statistics in Social Science
2017-10-19	spTimer	Spatio-Temporal Bayesian Modelling
2017-10-18	adjclust	Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
2017-10-18	areaplot	Plot Stacked Areas and Confidence Bands as Filled Polygons
2017-10-18	BayesRS	Bayes Factors for Hierarchical Linear Models with Continuous Predictors
2017-10-18	ctsem	Continuous Time Structural Equation Modelling
2017-10-18	divo	Tools for Analysis of Diversity and Similarity in Biological Systems
2017-10-18	FactoRizationMachines	Machine Learning with Higher-Order Factorization Machines
2017-10-18	FlowRegEnvCost	The Environmental Costs of Flow Regulation
2017-10-18	gcerisk	Generalized Competing Event Model
2017-10-18	geoRglm	A Package for Generalised Linear Spatial Models
2017-10-18	gpuR	GPU Functions for R Objects
2017-10-18	GreedySBTM	Greedy Stochastic Block Transition Models
2017-10-18	Haplin	Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
2017-10-18	HHG	Heller-Heller-Gorfine Tests of Independence and Equality of Distributions
2017-10-18	HSAR	Hierarchical Spatial Autoregressive Model
2017-10-18	LZeroSpikeInference	Exact Spike Train Inference via L0 Optimization
2017-10-18	mathpix	Support for the 'Mathpix' API (Image to 'LaTeX')
2017-10-18	NNMIS	Nearest Neighbor Based Multiple Imputation for Survival Data with Missing Covariates
2017-10-18	onemap	Construction of Genetic Maps in Experimental Crosses: Full-Sib, RILs, F2 and Backcrosses
2017-10-18	purrr	Functional Programming Tools
2017-10-18	rarhsmm	Regularized Autoregressive Hidden Semi Markov Model
2017-10-18	RonFHIR	Read and Search Interface to the 'HL7 FHIR' REST API
2017-10-18	rroad	Road Condition Analysis
2017-10-18	satellite	Handling and Manipulating Remote Sensing Data
2017-10-18	SimInf	A Framework for Data-Driven Stochastic Disease Spread Simulations
2017-10-18	swa	Subsampling Winner Algorithm for Classification
2017-10-18	tempR	Temporal Sensory Data Analysis
2017-10-17	clustMixType	k-Prototypes Clustering for Mixed Variable-Type Data
2017-10-17	crosswalkr	Rename and Encode Data Frames Using External Crosswalk Files
2017-10-17	data360r	Wrapper for TC/Govdata360 API
2017-10-17	dbstats	Distance-Based Statistics
2017-10-17	geomedb	Fetch 'GeOMe-db' FIMS Data
2017-10-17	geoops	'GeoJSON' Topology Calculations and Operations
2017-10-17	httpcache	Query Cache for HTTP Clients
2017-10-17	ivmodel	Statistical Inference and Sensitivity Analysis for Instrumental Variables Model
2017-10-17	knockoff	The Knockoff Filter for Controlled Variable Selection
2017-10-17	mregions	Marine Regions Data from 'Marineregions.org'
2017-10-17	NAM	Nested Association Mapping
2017-10-17	OpenML	Open Machine Learning and Open Data Platform
2017-10-17	randomForestSRC	Random Forests for Survival, Regression, and Classification (RF-SRC)
2017-10-17	reddPrec	Reconstruction of Daily Data - Precipitation
2017-10-17	RegularizedSCA	Regularized Simultaneous Component Based Data Integration
2017-10-17	sicegar	Analysis of Single-Cell Viral Growth Curves
2017-10-17	snht	Standard Normal Homogeneity Test
2017-10-17	vcrpart	Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models
2017-10-17	vennplot	Venn Diagrams in 2D and 3D
2017-10-16	BiG	Bayesian Aggregation in Genomic Applications
2017-10-16	bWGR	Bayesian Whole-Genome Regression
2017-10-16	copulaData	Data Sets for Copula Modeling
2017-10-16	corrplot	Visualization of a Correlation Matrix
2017-10-16	fdadensity	Functional Data Analysis for Density Functions by Transformation to a Hilbert Space
2017-10-16	fishmethods	Fishery Science Methods and Models in R
2017-10-16	forestinventory	Design-Based Global and Small-Area Estimations for Multiphase Forest Inventories
2017-10-16	future	Unified Parallel and Distributed Processing in R for Everyone
2017-10-16	GSMX	Multivariate Genomic Selection
2017-10-16	gsynth	Generalized Synthetic Control Method
2017-10-16	LMest	Latent Markov Models with and without Covariates
2017-10-16	metacart	Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis
2017-10-16	metaheuristicOpt	Metaheuristic for Optimization
2017-10-16	mvdalab	Multivariate Data Analysis Laboratory
2017-10-16	Rlabkey	Data Exchange Between R and LabKey Server
2017-10-16	rmsfuns	Quickly View Data Frames in 'Excel', Build Folder Paths and Create Date Vectors
2017-10-16	sarima	Simulation and Prediction with Seasonal ARIMA Models
2017-10-16	SelvarMix	Regularization for Variable Selection in Model-Based Clustering and Discriminant Analysis
2017-10-16	SILGGM	Statistical Inference of Large-Scale Gaussian Graphical Model in Gene Networks
2017-10-16	sperrorest	Perform Spatial Error Estimation and Variable Importance in Parallel
2017-10-16	tidyr	Easily Tidy Data with 'spread()' and 'gather()' Functions
2017-10-16	timetools	Seasonal/Sequential (Instants/Durations, Even or not) Time Series
2017-10-16	TSclust	Time Series Clustering Utilities
2017-10-16	uGMAR	Estimate Univariate Gaussian or Student's t Mixture Autoregressive Model
2017-10-16	VarSelLCM	Variable Selection for Model-Based Clustering of Continuous, Count, Categorical or Mixed-Type Data Set with Missing Values
2017-10-15	lagged	Classes and Methods for Lagged Objects
2017-10-15	pdfetch	Fetch Economic and Financial Time Series Data from Public Sources
2017-10-15	Plasmode	'Plasmode' Simulation
2017-10-15	regnet	Network-Based Regularization for Generalized Linear Models
2017-10-15	rglobi	R Interface to Global Biotic Interactions
2017-10-15	RSentiment	Analyse Sentiment of English Sentences
2017-10-15	RViennaCL	'ViennaCL' C++ Header Files
2017-10-15	sigQC	Quality Control Metrics for Gene Signatures
2017-10-15	water	Actual Evapotranspiration with Energy Balance Models
2017-10-14	asht	Applied Statistical Hypothesis Tests
2017-10-14	AssocTests	Genetic Association Studies
2017-10-14	bayesLife	Bayesian Projection of Life Expectancy
2017-10-14	collectArgs	Quickly and Neatly Collect Arguments from One Environment to Pass to Another
2017-10-14	covequal	Test for Equality of Covariance Matrices
2017-10-14	exifr	EXIF Image Data in R
2017-10-14	lawn	Client for 'Turfjs' for 'Geospatial' Analysis
2017-10-14	npsurv	Nonparametric Survival Analysis
2017-10-14	oshka	Recursive Quoted Language Expansion
2017-10-14	otvPlots	Over Time Variable Plots
2017-10-14	ProTrackR	Manipulate and Play 'ProTracker' Modules
2017-10-14	RcmdrPlugin.UCA	UCA Rcmdr Plug-in
2017-10-14	SEMID	Identifiability of Linear Structural Equation Models
2017-10-14	slickR	Create Interactive Carousels with the JavaScript 'Slick' Library
2017-10-14	welchADF	Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality
2017-10-13	bedr	Genomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
2017-10-13	breathtestcore	Core Functions to Read and Fit 13c Time Series from Breath Tests
2017-10-13	brglm2	Bias Reduction in Generalized Linear Models
2017-10-13	ChoR	Chordalysis R Package
2017-10-13	dave	Functions for "Data Analysis in Vegetation Ecology"
2017-10-13	desplot	Plotting Field Plans for Agricultural Experiments
2017-10-13	LMfilteR	Filter Methods for Parameter Estimation in Linear Regression Models
2017-10-13	PLmixed	Estimate (Generalized) Linear Mixed Models with Factor Structures
2017-10-13	PTXQC	Quality Report Generation for MaxQuant Results
2017-10-13	queueing	Analysis of Queueing Networks and Models
2017-10-13	rucrdtw	R Bindings for the UCR Suite
2017-10-13	RxODE	Facilities for Simulating from ODE-Based Models
2017-10-12	adegenet	Exploratory Analysis of Genetic and Genomic Data
2017-10-12	BETS	Brazilian Economic Time Series
2017-10-12	brainR	Helper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging
2017-10-12	curstatCI	Confidence Intervals for the Current Status Model
2017-10-12	icd	Tools for Working with ICD-9 and ICD-10 Codes, and Finding Comorbidities
2017-10-12	icmm	Empirical Bayes Variable Selection via ICM/M Algorithm
2017-10-12	iDINGO	Integrative Differential Network Analysis in Genomics
2017-10-12	incgraph	Incremental Graphlet Counting for Network Optimisation
2017-10-12	opencpu	Producing and Reproducing Results
2017-10-12	poplite	Tools for Simplifying the Population and Querying of SQLite Databases
2017-10-12	PubMedWordcloud	'Pubmed' Word Clouds
2017-10-12	rJava	Low-Level R to Java Interface
2017-10-12	tRophicPosition	Bayesian Trophic Position Calculation with Stable Isotopes
2017-10-11	AmyloGram	Prediction of Amyloid Proteins
2017-10-11	condvis	Conditional Visualization for Statistical Models
2017-10-11	CUB	A Class of Mixture Models for Ordinal Data
2017-10-11	dblr	Discrete Boosting Logistic Regression
2017-10-11	HybridFS	A Hybrid Filter-Wrapper Feature Selection Method
2017-10-11	kirby21.base	Example Data from the Multi-Modal MRI 'Reproducibility' Resource
2017-10-11	matlabr	An Interface for MATLAB using System Calls
2017-10-11	mnreadR	MNREAD Parameters Estimation and Curve Plotting
2017-10-11	onewaytests	One-Way Tests in Independent Groups Designs
2017-10-11	pcev	Principal Component of Explained Variance
2017-10-11	rgrass7	Interface Between GRASS 7 Geographical Information System and R
2017-10-11	rollmatch	Rolling Entry Matching
2017-10-11	rscopus	Scopus Database 'API' Interface
2017-10-11	rvertnet	Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
2017-10-11	SDMPlay	Species Distribution Modelling Playground
2017-10-11	SIMMS	Subnetwork Integration for Multi-Modal Signatures
2017-10-11	survidm	Inference and Prediction in an Illness-Death Model
2017-10-11	temperatureresponse	Temperature Response
2017-10-11	triversity	Diversity Measures on Tripartite Graphs
2017-10-11	XKCDdata	Get XKCD Comic Data
2017-10-11	xSub	Cross-National Data on Sub-National Violence
2017-10-10	acs	Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census
2017-10-10	anipaths	Animate Paths
2017-10-10	bookdownplus	Generate Varied Types of Books and Documents with R 'bookdown' Package
2017-10-10	CCTpack	Consensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications
2017-10-10	colorednoise	Simulate Temporally Autocorrelated Population Time Series
2017-10-10	colt	Command-Line Color Themes
2017-10-10	explor	Interactive Interfaces for Results Exploration
2017-10-10	freesurfer	Wrapper Functions for 'Freesurfer'
2017-10-10	gcite	Google Citation Parser
2017-10-10	GUTS	Fast Calculation of the Likelihood of a Stochastic Survival Model
2017-10-10	hisse	Hidden State Speciation and Extinction
2017-10-10	Kernelheaping	Kernel Density Estimation for Heaped and Rounded Data
2017-10-10	mapfuser	Construct Consensus Genetic Maps and Estimate Recombination Rates
2017-10-10	MCI	Multiplicative Competitive Interaction (MCI) Model
2017-10-10	meltt	Matching Event Data by Location, Time and Type
2017-10-10	phyloTop	Calculating Topological Properties of Phylogenies
2017-10-10	pscl	Political Science Computational Laboratory
2017-10-10	PTE	Personalized Treatment Evaluator
2017-10-10	rakeR	Easy Spatial Microsimulation (Raking) in R
2017-10-10	RatingScaleReduction	Rating Scale Reduction Procedure
2017-10-10	rWind	Download, Edit and Include Wind Data in Ecological and Evolutionary Analysis
2017-10-10	sys	Portable System Utilities
2017-10-09	brea	Bayesian Recurrent Event Analysis
2017-10-09	CatPredi	Optimal Categorisation of Continuous Variables in Prediction Models
2017-10-09	colf	Constrained Optimization on Linear Function
2017-10-09	colourvision	Colour Vision Models
2017-10-09	ctmcd	Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data
2017-10-09	EffectStars	Visualization of Categorical Response Models
2017-10-09	EnvStats	Package for Environmental Statistics, Including US EPA Guidance
2017-10-09	hansard	Provides Easy Downloading Capabilities for the UK Parliament API
2017-10-09	mada	Meta-Analysis of Diagnostic Accuracy
2017-10-09	QGglmm	Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models
2017-10-09	rcarbon	Calibration and Analysis of Radiocarbon Dates
2017-10-09	RcppBlaze	'Rcpp' Integration for the 'Blaze' High-Performance C++ Math Library
2017-10-09	Replicate	Statistical Metrics for Multisite Replication Studies
2017-10-09	survivALL	Continuous Biomarker Assessment by Exhaustive Survival Analysis
2017-10-09	vdiffr	Visual Regression Testing and Graphical Diffing
2017-10-08	alfred	Downloading Time Series from ALFRED Database for Various Vintages
2017-10-08	anominate	Alpha-NOMINATE Ideal Point Estimator
2017-10-08	BMhyb	Hybrid Trait Evolution under Brownian Motion
2017-10-08	gcKrig	Analysis of Geostatistical Count Data using Gaussian Copulas
2017-10-08	mozzie	Weekly Notified Dengue Cases in Sri Lanka
2017-10-08	rerf	Randomer Forest
2017-10-08	RNetCDF	Interface to NetCDF Datasets
2017-10-08	rugarch	Univariate GARCH Models
2017-10-08	simcausal	Simulating Longitudinal Data with Causal Inference Applications
2017-10-08	trustOptim	Trust Region Optimization for Nonlinear Functions with Sparse Hessians
2017-10-08	vagalumeR	Access to the 'Vagalume' API
2017-10-07	D3partitionR	Interactive Charts of Nested and Hierarchical Data with 'D3.js'
2017-10-07	editData	'RStudio' Addin for Editing a 'data.frame'
2017-10-07	GROAN	Genomic Regression Workbench
2017-10-07	pmhtutorial	Minimal Working Examples for Particle Metropolis-Hastings
2017-10-07	RPEnsemble	Random Projection Ensemble Classification
2017-10-07	SQUAREM	Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms
2017-10-06	BaTFLED3D	Bayesian Tensor Factorization Linked to External Data
2017-10-06	Blaunet	Calculate and Analyze Blau Status for (Covert) Organizations
2017-10-06	BLRPM	Stochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model
2017-10-06	BrownDog	Brown Dog R Interface
2017-10-06	dcmodify	Modify Data Using Externally Defined Modification Rules
2017-10-06	DWLasso	Degree Weighted Lasso
2017-10-06	frailtypack	General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction
2017-10-06	gemlog	File Conversion for 'Gem Infrasound Logger'
2017-10-06	genridge	Generalized Ridge Trace Plots for Ridge Regression
2017-10-06	GSCAD	Implementing GSCAD Method for Image Denoising and Inpainting
2017-10-06	hyperSpec	Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
2017-10-06	IIS	Datasets to Accompany Wolfe and Schneider - Intuitive Introductory Statistics
2017-10-06	kdecopula	Kernel Smoothing for Bivariate Copula Densities
2017-10-06	MareyMap	Estimation of Meiotic Recombination Rates Using Marey Maps
2017-10-06	oro.pet	Rigorous - Positron Emission Tomography
2017-10-06	PResiduals	Probability-Scale Residuals and Residual Correlations
2017-10-06	rLakeAnalyzer	Lake Physics Tools
2017-10-06	RmecabKo	An 'Rcpp' Interface for Eunjeon Project
2017-10-06	shelltrace	Bivalve Growth and Trace Element Accumulation Model
2017-10-06	SnakeCharmR	R and Python Integration
2017-10-06	SSDforR	Functions to Analyze Single System Data
2017-10-06	tensorBSS	Blind Source Separation Methods for Tensor-Valued Observations
2017-10-05	clifro	Easily Download and Visualise Climate Data from CliFlo
2017-10-05	DataEntry	Make it Easier to Enter Questionnaire Data
2017-10-05	diffMeanVar	Detecting Gene Probes with Different Means or Variances Between Two Groups
2017-10-05	EWGoF	Goodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
2017-10-05	fingertipsR	Fingertips Data for Public Health
2017-10-05	GBJ	Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies
2017-10-05	gbutils	Simulation of Real and Complex Numbers and Small Programming Utilities
2017-10-05	gghighlight	Highlight Lines and Points in 'ggplot2'
2017-10-05	INCATome	Internal Control Analysis of Translatome Studies by Microarrays
2017-10-05	latexpdf	Convert Tables to PDF or PNG
2017-10-05	matchbook	Wrapper for the 'Matchbook' API
2017-10-05	MCMCglmm	MCMC Generalised Linear Mixed Models
2017-10-05	nlsr	Functions for Nonlinear Least Squares Solutions
2017-10-05	OutbreakTools	Basic Tools for the Analysis of Disease Outbreaks
2017-10-05	quickPlot	A System of Plotting Optimized for Speed and Modularity
2017-10-05	RelimpPCR	Relative Importance PCA Regression
2017-10-05	relsurv	Relative Survival
2017-10-05	spc	Statistical Process Control – Collection of Some Useful Functions
2017-10-05	swirlify	A Toolbox for Writing 'swirl' Courses
2017-10-04	birtr	The R Package for "The Basics of Item Response Theory Using R"
2017-10-04	FactoInvestigate	Automatic Description of Factorial Analysis
2017-10-04	factorMerger	Hierarchical Algorithm for Post-Hoc Testing
2017-10-04	hamlet	Hierarchical Optimal Matching and Machine Learning Toolbox
2017-10-04	highlight	Syntax Highlighter
2017-10-04	IDF	Estimation and Plotting of IDF Curves
2017-10-04	infuser	A Very Basic Templating Engine
2017-10-04	kader	Kernel Adaptive Density Estimation and Regression
2017-10-04	lagsarlmtree	Spatial Lag Model Trees
2017-10-04	polmineR	Toolkit for Corpus Analysis
2017-10-04	proustr	Tools for Natural Language Processing in French
2017-10-04	recombinator	Recombinate Nested Lists to Dataframes
2017-10-04	rma.exact	Exact Confidence Intervals for Random Effects Meta-Analyses
2017-10-04	Rssa	A Collection of Methods for Singular Spectrum Analysis
2017-10-04	selectiveInference	Tools for Post-Selection Inference
2017-10-04	SixSigma	Six Sigma Tools for Quality Control and Improvement
2017-10-04	smpic	Creates Images Sized for Social Media
2017-10-04	spduration	Split-Population Duration (Cure) Regression
2017-10-04	suncalc	Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase
2017-10-04	Sunclarco	Survival Analysis using Copulas
2017-10-03	confinterpret	Descriptive Interpretations of Confidence Intervals
2017-10-03	ecd	Elliptic Lambda Distribution and Option Pricing Model
2017-10-03	fedreporter	Interface to Federal 'RePORTER' API
2017-10-03	InvariantCausalPrediction	Invariant Causal Prediction
2017-10-03	RProtoBuf	R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
2017-10-03	splot	Split Plot
2017-10-03	tidyboot	Tidyverse-Compatible Bootstrapping
2017-10-03	transport	Optimal Transport in Various Forms
2017-10-02	additiveDEA	Additive Data Envelopment Analysis Models
2017-10-02	cgam	Constrained Generalized Additive Model
2017-10-02	ConSpline	Partial Linear Least-Squares Regression using Constrained Splines
2017-10-02	DoubleCone	Test Against Parametric Regression Function
2017-10-02	EnergyOnlineCPM	Distribution Free Multivariate Control Chart Based on Energy Test
2017-10-02	exactci	Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
2017-10-02	GenomicMating	Efficient Breeding by Genomic Mating
2017-10-02	ggallin	Grab Bag of 'ggplot2' Functions
2017-10-02	gphmm	Generalized Pair Hidden Markov Chain Model for Sequence Alignment
2017-10-02	MuMIn	Multi-Model Inference
2017-10-02	nzelect	New Zealand Election Data
2017-10-02	pavo	Perceptual Analysis, Visualization and Organization of Spectral Color Data in R
2017-10-02	pivottabler	Create Pivot Tables in R
2017-10-02	polyCub	Cubature over Polygonal Domains
2017-10-02	RAdwords	Loading Google Adwords Data into R
2017-10-02	RSwissMaps	Plot and Save Customised Swiss Maps
2017-10-02	rzmq	R Bindings for 'ZeroMQ'
2017-10-02	shallot	Random Partition Distribution Indexed by Pairwise Information
2017-10-02	SigTree	Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree
2017-10-02	SPYvsSPY	Spy vs. Spy Data
2017-10-02	tangram	The Grammar of Tables
2017-10-02	triangle	Provides the Standard Distribution Functions for the Triangle Distribution
2017-10-02	TSCS	Time Series Cointegrated System
2017-10-01	childsds	Data and Methods Around Reference Values in Pediatrics
2017-10-01	convexjlr	Disciplined Convex Programming in R using 'Convex.jl'
2017-10-01	DDD	Diversity-Dependent Diversification
2017-10-01	msaR	Multiple Sequence Alignment for R Shiny
2017-10-01	PWEALL	Design and Monitoring of Survival Trials Accounting for Complex Situations
2017-10-01	realestateDK	A Wrapper for the API of the Danish Housing Market Statistics
2017-10-01	teamcolors	Color Palettes for Pro Sports Teams
2017-10-01	vein	Vehicular Emissions Inventories
2017-09-30	ANOVAreplication	Test ANOVA Replications by Means of the Prior Predictive p-Value
2017-09-30	basictabler	Construct Rich Tables for Output to 'HTML'/'Excel'
2017-09-30	define	Create FDA-Style Data and Program Definitions
2017-09-30	DSAIDE	Dynamical Systems Approach to Infectious Disease Epidemiology
2017-09-30	ggsci	Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
2017-09-30	ini	Read and Write '.ini' Files
2017-09-30	msu	Multivariate Symmetric Uncertainty and Other Measurements
2017-09-30	SensMap	Sensory and Consumer Data Mapping
2017-09-30	SimTimeVar	Simulate Longitudinal Dataset with Time-Varying Correlated Covariates
2017-09-30	statsDK	A Wrapper for the API of Statistics Denmark
2017-09-30	wpp2017	World Population Prospects 2017
2017-09-29	apercu	Quick Look at your Data
2017-09-29	CHMM	Coupled Hidden Markov Models
2017-09-29	fRLR	Fit Repeated Linear Regressions
2017-09-29	ggrepel	Repulsive Text and Label Geoms for 'ggplot2'
2017-09-29	hdnom	Benchmarking and Visualization Toolkit for Penalized Cox Models
2017-09-29	htmltidy	Tidy Up and Test XPath Queries on HTML and XML Content
2017-09-29	MANOVA.RM	Analysis of Multivariate Data and Repeated Measures Designs
2017-09-29	MFKnockoffs	Model-Free Knockoff Filter for Controlled Variable Selection
2017-09-29	mmpp	Various Similarity and Distance Metrics for Marked Point Processes
2017-09-29	pairwise	Rasch Model Parameters by Pairwise Algorithm
2017-09-29	paleofire	Analysis of Charcoal Records from the Global Charcoal Database
2017-09-29	RCPmod	Regions of Common Profiles Modelling with Mixtures-of-Experts
2017-09-29	rdrop2	Programmatic Interface to the 'Dropbox' API
2017-09-29	simr	Power Analysis for Generalised Linear Mixed Models by Simulation
2017-09-29	vcdExtra	'vcd' Extensions and Additions
2017-09-28	ArchaeoPhases	Post-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal'
2017-09-28	breakfast	Multiple Change-Point Detection and Segmentation
2017-09-28	catcont	Test for and Identify Categorical or Continuous Values
2017-09-28	chopthin	The Chopthin Resampler
2017-09-28	clusterSEs	Calculate Cluster-Robust p-Values and Confidence Intervals
2017-09-28	DatabionicSwarm	Swarm Intelligence for Self-Organized Clustering
2017-09-28	dataRetrieval	Retrieval Functions for USGS and EPA Hydrologic and Water Quality Data
2017-09-28	DoE.MIParray	Creation of Arrays by Mixed Integer Programming
2017-09-28	doParallel	Foreach Parallel Adaptor for the 'parallel' Package
2017-09-28	dplyr	A Grammar of Data Manipulation
2017-09-28	electoral	Allocating Seats Methods and Party System Scores
2017-09-28	enaR	Tools for Ecological Network Analysis
2017-09-28	gesca	Generalized Structured Component Analysis (GSCA)
2017-09-28	glacierSMBM	Glacier Surface Mass Balance Model
2017-09-28	isnullptr	Check if an 'externalptr' is a Null Pointer
2017-09-28	jqr	Client for 'jq', a 'JSON' Processor
2017-09-28	Momocs	Morphometrics using R
2017-09-28	pder	Panel Data Econometrics with R
2017-09-28	pifpaf	Potential Impact Fraction and Population Attributable Fraction for Cross-Sectional Data
2017-09-28	projector	Project Dense Vectors Representation of Texts on a 2D Plan
2017-09-28	qGaussian	The q-Gaussian Distribution
2017-09-28	quickReg	Build Regression Models Quickly and Display the Results Using 'ggplot2'
2017-09-28	repfdr	Replicability Analysis for Multiple Studies of High Dimension
2017-09-28	zeallot	Multiple, Unpacking, and Destructuring Assignment
2017-09-27	APfun	Geo-Processing Helper Functions
2017-09-27	colourpicker	A Colour Picker Tool for Shiny and for Selecting Colours in Plots
2017-09-27	ddalpha	Depth-Based Classification and Calculation of Data Depth
2017-09-27	ecoseries	An R Interface to Brazilian Central Bank and Sidra APIs and the IPEA Data
2017-09-27	enpls	Ensemble Partial Least Squares Regression
2017-09-27	epitable	Create HTML Tables in the Style Used in Epidemiological Papers
2017-09-27	etl	Extract-Transform-Load Framework for Medium Data
2017-09-27	EventStudy	Event Study Analysis
2017-09-27	hybridModels	Stochastic Hybrid Models in Dynamic Networks
2017-09-27	importar	Enables Importing/Loading of Packages or Functions While Creating an Alias for Them
2017-09-27	ISOcodes	Selected ISO Codes
2017-09-27	kfda	Kernel Fisher Discriminant Analysis
2017-09-27	LFDREmpiricalBayes	Estimating Local False Discovery Rates Using Empirical Bayes Methods
2017-09-27	MNP	R Package for Fitting the Multinomial Probit Model
2017-09-27	MSbox	Mass Spectrometry Tools
2017-09-27	RcppZiggurat	'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations
2017-09-27	regplot	Enhanced Regression Nomogram Plot
2017-09-27	sampSurf	Sampling Surface Simulation for Areal Sampling Methods
2017-09-27	surrosurv	Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses
2017-09-27	tau	Text Analysis Utilities
2017-09-27	taxize	Taxonomic Information from Around the Web
2017-09-27	tinyProject	A Lightweight Template for Data Analysis Projects
2017-09-27	vetr	Trust, but Verify
2017-09-26	bayesAB	Fast Bayesian Methods for AB Testing
2017-09-26	BNPMIXcluster	Bayesian Nonparametric Model for Clustering with Mixed Scale Variables
2017-09-26	coinmarketcapr	Get Cryptocurrencies Market Cap Prices from Coin Market Cap
2017-09-26	ggraptR	Allows Interactive Visualization of Data Through a Web Browser GUI
2017-09-26	kmi	Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting
2017-09-26	OutliersO3	Draws Overview of Outliers (O3) Plot
2017-09-26	RcppAnnoy	'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
2017-09-26	rsurface	Design of Rotatable Central Composite Experiments and Response Surface Analysis
2017-09-26	sgmcmc	Stochastic Gradient Markov Chain Monte Carlo
2017-09-25	Cprob	The Conditional Probability Function of a Competing Event
2017-09-25	d3plus	Seamless 'D3Plus' Integration
2017-09-25	econullnetr	Null Model Analysis for Ecological Networks
2017-09-25	ECOSolveR	Embedded Conic Solver in R
2017-09-25	forecast	Forecasting Functions for Time Series and Linear Models
2017-09-25	MPSEM	Modeling Phylogenetic Signals using Eigenvector Maps
2017-09-25	MTA	Multiscalar Territorial Analysis
2017-09-25	prioritylasso	Analyzing Multiple Omics Data with an Offset Approach
2017-09-25	PSTR	Panel Smooth Transition Regression Modelling
2017-09-25	RDML	Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files
2017-09-25	Rpdb	Read, Write, Visualize and Manipulate PDB Files
2017-09-25	svd	Interfaces to Various State-of-Art SVD and Eigensolvers
2017-09-25	TreeSimGM	Simulating Phylogenetic Trees under General Bellman Harris and Lineage Shift Model
2017-09-25	wrswoR.benchmark	Benchmark and Correctness Data for Weighted Random Sampling Without Replacement
2017-09-25	wsrf	Weighted Subspace Random Forest for Classification
2017-09-24	ICBayes	Bayesian Semiparametric Models for Interval-Censored Data
2017-09-24	JGR	Java GUI for R
2017-09-24	MatrixCorrelation	Matrix Correlation Coefficients
2017-09-24	RcppGSL	'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
2017-09-24	scam	Shape Constrained Additive Models
2017-09-24	smoothSurv	Survival Regression with Smoothed Error Distribution
2017-09-24	spacetime	Classes and Methods for Spatio-Temporal Data
2017-09-23	apex	Phylogenetic Methods for Multiple Gene Data
2017-09-23	collapsibleTree	Interactive Collapsible Tree Diagrams using 'D3.js'
2017-09-23	exams	Automatic Generation of Exams in R
2017-09-23	parlitools	Tools for Analysing UK Politics
2017-09-23	sensitivity	Global Sensitivity Analysis of Model Outputs
2017-09-23	sparseFLMM	Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data
2017-09-23	wikipediatrend	Public Subject Attention via Wikipedia Page View Statistics
2017-09-22	AdaptFitOS	Adaptive Semiparametric Regression with Simultaneous Confidence Bands
2017-09-22	anomalyDetection	Implementation of Augmented Network Log Anomaly Detection Procedures
2017-09-22	DescriptiveStats.OBeu	Descriptive Statistics OpenBudgets.eu
2017-09-22	glmnet	Lasso and Elastic-Net Regularized Generalized Linear Models
2017-09-22	GPPFourier	Calculate Gross Primary Production (GPP) from O2 Time Series
2017-09-22	leabRa	The Artificial Neural Networks Algorithm Leabra
2017-09-22	mosaicModel	An Interface to Statistical Modeling Independent of Model Architecture
2017-09-22	MRFA	Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach
2017-09-22	OBMbpkg	Estimate the Population Size for the Mb Capture-Recapture Model
2017-09-22	qrcmNP	Nonlinear and Penalized Quantile Regression Coefficients Modeling
2017-09-22	rase	Range Ancestral State Estimation for Phylogeography and Comparative Analyses
2017-09-22	RBMRB	BMRB Data Access and Visualization
2017-09-22	RcmdrPlugin.sutteForecastR	'Rcmdr' Plugin for Alpha-Sutte Indicator 'sutteForecastR'
2017-09-22	regexSelect	Regular Expressions in 'shiny' Select Lists
2017-09-22	rprev	Estimating Disease Prevalence from Registry Data
2017-09-22	traits	Species Trait Data from Around the Web
2017-09-22	USCF	Elo Rating of a USCF Member
2017-09-22	WikidataR	API Client Library for 'Wikidata'
2017-09-21	AbsFilterGSEA	Improved False Positive Control of Gene-Permuting GSEA with Absolute Filtering
2017-09-21	alakazam	Immunoglobulin Clonal Lineage and Diversity Analysis
2017-09-21	augSIMEX	Analysis of Data with Mixed Measurement Error and Misclassification in Covariates
2017-09-21	BART	Bayesian Additive Regression Trees
2017-09-21	brazilmaps	Brazilian Maps from Different Geographic Levels
2017-09-21	formula.tools	Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects
2017-09-21	genBaRcode	Analysis and Visualization Tools for Genetic Barcode Data
2017-09-21	magicLamp	'WeMo Switch' Smart Plug Utilities
2017-09-21	metRology	Support for Metrological Applications
2017-09-21	QLearning	Reinforcement Learning using the Q Learning Algorithm
2017-09-21	rstansim	Simulation Studies with Stan
2017-09-21	softermax	Read Exported Data from 'SoftMax Pro'
2017-09-21	SSLASSO	The Spike-and-Slab LASSO
2017-09-21	tigger	R Tools for Inferring New Immunoglobulin Alleles from Rep-Seq Data
2017-09-20	BradleyTerry2	Bradley-Terry Models
2017-09-20	cptec	An Interface to the 'CPTEC/INPE' API
2017-09-20	darksky	Tools to Work with the 'Dark Sky' 'API'
2017-09-20	ensemblepp	Ensemble Postprocessing Data Sets
2017-09-20	FDRSeg	FDR-Control in Multiscale Change-Point Segmentation
2017-09-20	fergm	Estimation and Fit Assessment of Frailty Exponential Random Graph Models
2017-09-20	InterpretMSSpectrum	Interpreting High Resolution Mass Spectra
2017-09-20	lidR	Airborne LiDAR Data Manipulation and Visualization for Forestry Applications
2017-09-20	molaR	Dental Surface Complexity Measurement Tools
2017-09-20	NSM3	Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
2017-09-20	prettymapr	Scale Bar, North Arrow, and Pretty Margins in R
2017-09-20	ROI.plugin.clp	'Clp (Coin-or linear programming)' Plugin for the 'R' Optimization Interface
2017-09-20	rstpm2	Generalized Survival Models
2017-09-20	rwc	Random Walk Covariance Models
2017-09-20	SOIL	Sparsity Oriented Importance Learning
2017-09-20	SOMbrero	SOM Bound to Realize Euclidean and Relational Outputs
2017-09-20	Tides	Quasi-Periodic Time Series Characteristics
2017-09-20	toxplot	Batch Processing, Modeling and Visualizing the Dose-Response of High-Throughput Screening Bioassay
2017-09-20	trelliscope	Create and Navigate Large Multi-Panel Visual Displays
2017-09-19	binaryGP	Fit and Predict a Gaussian Process Model with (Time-Series) Binary Response
2017-09-19	BMT	The BMT Distribution
2017-09-19	candisc	Visualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
2017-09-19	CluMix	Clustering and Visualization of Mixed-Type Data
2017-09-19	COCONUT	COmbat CO-Normalization Using conTrols (COCONUT)
2017-09-19	coneproj	Primal or Dual Cone Projections with Routines for Constrained Regression
2017-09-19	curvecomp	Multiple Curve Comparisons Using Parametric Bootstrap
2017-09-19	envDocument	Document the R Working Environment
2017-09-19	EQUIVNONINF	Testing for Equivalence and Noninferiority
2017-09-19	fusionclust	Clustering and Feature Screening using L1 Fusion Penalty
2017-09-19	gma	Granger Mediation Analysis
2017-09-19	IGP	Interchangeable Gaussian Process Models
2017-09-19	kpeaks	Determination of K Using Peak Counts of Features for Clustering
2017-09-19	lgtdl	A Set of Methods for Longitudinal Data Objects
2017-09-19	magicaxis	Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support
2017-09-19	MALDIrppa	MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
2017-09-19	manet	Multiple Allocation Model for Actor-Event Networks
2017-09-19	predtoolsTS	Time Series Prediction
2017-09-19	QuantTools	Enhanced Quantitative Trading Modelling
2017-09-19	qvcalc	Quasi Variances for Factor Effects in Statistical Models
2017-09-19	rsparkling	R Interface for H2O Sparkling Water
2017-09-19	SiER	Signal Extraction Approach for Sparse Multivariate Response Regression
2017-09-19	speaq	Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations
2017-09-19	stochvol	Efficient Bayesian Inference for Stochastic Volatility (SV) Models
2017-09-19	sure	Surrogate Residuals for Ordinal and General Regression Models
2017-09-19	Unicode	Unicode Data and Utilities
2017-09-18	bib2df	Parse a BibTeX File to a data.frame
2017-09-18	BNSL	Bayesian Network Structure Learning
2017-09-18	egcm	Engle-Granger Cointegration Models
2017-09-18	leafSTAR	Silhouette to Area Ratio of Tilted Surfaces
2017-09-18	mcMST	A Toolbox for the Multi-Criteria Minimum Spanning Tree Problem
2017-09-18	mvLSW	Multivariate, Locally Stationary Wavelet Process Estimation
2017-09-18	nproc	Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves
2017-09-18	prefmod	Utilities to Fit Paired Comparison Models for Preferences
2017-09-18	recmap	Compute the Rectangular Statistical Cartogram
2017-09-18	scaleboot	Approximately Unbiased P-Values via Multiscale Bootstrap
2017-09-18	tsgui	Gui for Simulating Time Series
2017-09-17	cytominer	Methods for Image-Based Cell Profiling
2017-09-17	ggpmisc	Miscellaneous Extensions to 'ggplot2'
2017-09-17	randnet	Random Network Model Selection and Parameter Tuning
2017-09-17	rbtt	Alternative Bootstrap-Based t-Test Aiming to Reduce Type-I Error for Non-Negative, Zero-Inflated Data
2017-09-17	SampleSize4ClinicalTrials	Sample Size Calculation for Mean and Proportion Comparisons in Phase 3 Clinical Trials
2017-09-17	vegclust	Fuzzy Clustering of Vegetation Data
2017-09-16	crayon	Colored Terminal Output
2017-09-16	DES	Discrete Event Simulation
2017-09-16	EthSEQ	Ethnicity Annotation from Whole Exome Sequencing Data
2017-09-16	forestplot	Advanced Forest Plot Using 'grid' Graphics
2017-09-16	gensphere	Generalized Spherical Distributions
2017-09-16	googleComputeEngineR	R Interface with Google Compute Engine
2017-09-16	lambda.r	Modeling Data with Functional Programming
2017-09-16	MsdeParEst	Parametric Estimation in Mixed-Effects Stochastic Differential Equations
2017-09-16	mvmesh	Multivariate Meshes and Histograms in Arbitrary Dimensions
2017-09-16	pixiedust	Tables so Beautifully Fine-Tuned You Will Believe It's Magic
2017-09-16	PKI	Public Key Infrastucture for R Based on the X.509 Standard
2017-09-16	SphericalCubature	Numerical Integration over Spheres and Balls in n-Dimensions; Multivariate Polar Coordinates
2017-09-16	wildcard	Templates for Data Frames
2017-09-15	ASIP	Automated Satellite Image Processing
2017-09-15	AurieLSHGaussian	Creates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections
2017-09-15	CATTexact	Computation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test
2017-09-15	DoE.wrapper	Wrapper Package for Design of Experiments Functionality
2017-09-15	effects	Effect Displays for Linear, Generalized Linear, and Other Models
2017-09-15	fastcox	Lasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm
2017-09-15	ggjoy	Joyplots in 'ggplot2'
2017-09-15	gglasso	Group Lasso Penalized Learning Using a Unified BMD Algorithm
2017-09-15	ggridges	Ridgeline Plots in 'ggplot2'
2017-09-15	Gmedian	Geometric Median, k-Median Clustering and Robust Median PCA
2017-09-15	gradientPickerD3	Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker'
2017-09-15	heemod	Markov Models for Health Economic Evaluations
2017-09-15	heplots	Visualizing Hypothesis Tests in Multivariate Linear Models
2017-09-15	linemap	Line Maps
2017-09-15	liureg	Liu Regression with Liu Biasing Parameters and Statistics
2017-09-15	medflex	Flexible Mediation Analysis Using Natural Effect Models
2017-09-15	MFT	The Multiple Filter Test for Change Point Detection
2017-09-15	SCORPIUS	Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data
2017-09-15	sitar	Super Imposition by Translation and Rotation Growth Curve Analysis
2017-09-15	spmoran	Moran's Eigenvector-Based Spatial Regression Models
2017-09-15	veccompare	Perform Set Operations on Vectors, Automatically Generating All n-Wise Comparisons, and Create Markdown Output
2017-09-14	adiv	Analysis of Diversity
2017-09-14	adwave	Wavelet Analysis of Genomic Data from Admixed Populations
2017-09-14	alineR	Alignment of Phonetic Sequences Using the 'ALINE' Algorithm
2017-09-14	ASMap	Linkage Map Construction using the MSTmap Algorithm
2017-09-14	bizdays	Business Days Calculations and Utilities
2017-09-14	CausalImpact	Inferring Causal Effects using Bayesian Structural Time-Series Models
2017-09-14	causalMGM	Causal Learning of Mixed Graphical Models
2017-09-14	elastic	General Purpose Interface to 'Elasticsearch'
2017-09-14	energy	E-Statistics: Multivariate Inference via the Energy of Data
2017-09-14	eVenn	A Powerful Tool to Quickly Compare Huge Lists and Draw Venn Diagrams
2017-09-14	GetTDData	Get Data for Brazilian Bonds (Tesouro Direto)
2017-09-14	glassdoor	Interface to 'Glassdoor' API
2017-09-14	joineR	Joint Modelling of Repeated Measurements and Time-to-Event Data
2017-09-14	MAMS	Designing Multi-Arm Multi-Stage Studies
2017-09-14	mmand	Mathematical Morphology in Any Number of Dimensions
2017-09-14	nprobust	Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation
2017-09-14	perccalc	Estimate Percentiles from an Ordered Categorical Variable
2017-09-14	plsgenomics	PLS Analyses for Genomics
2017-09-14	RNifti	Fast R and C++ Access to NIfTI Images
2017-09-14	RSA	Response Surface Analysis
2017-09-14	smoothAPC	Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects
2017-09-14	TR8	A Tool for Downloading Functional Traits Data for Plant Species
2017-09-13	adlift	An Adaptive Lifting Scheme Algorithm
2017-09-13	ADPF	Use Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay
2017-09-13	aroma.core	Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
2017-09-13	asdreader	Reading ASD Binary Files in R
2017-09-12	agricolae	Statistical Procedures for Agricultural Research
2017-09-12	auto.pca	Automatic Variable Reduction Using Principal Component Analysis
2017-09-12	bayesplot	Plotting for Bayesian Models
2017-09-12	BSSasymp	Asymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
2017-09-12	DCD	Differential Community Detection in Paired Biological Networks
2017-09-12	dosresmeta	Multivariate Dose-Response Meta-Analysis
2017-09-12	egg	Extensions for 'ggplot2', to Align Plots, and Set Panel Sizes
2017-09-12	fICA	Classical, Reloaded and Adaptive FastICA Algorithms
2017-09-12	FractalParameterEstimation	Simulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model
2017-09-12	gains	Lift (Gains) Tables and Charts
2017-09-12	intccr	Semiparametric Competing Risks Regression under Interval Censoring
2017-09-12	lemon	Freshing Up your 'ggplot2' Plots
2017-09-12	medmod	Simple Mediation and Moderation Analysis
2017-09-12	powerMediation	Power/Sample Size Calculation for Mediation Analysis
2017-09-12	PredPsych	Predictive Approaches in Psychology
2017-09-12	pubmed.mineR	Text Mining of PubMed Abstracts
2017-09-12	qtlbook	Datasets for the R/qtl Book
2017-09-12	Rilostat	ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service
2017-09-12	sparsebn	Learning Sparse Bayesian Networks from High-Dimensional Data
2017-09-12	SpatialNP	Multivariate Nonparametric Methods Based on Spatial Signs and Ranks
2017-09-12	tergm	Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
2017-09-12	unifDAG	Uniform Sampling of Directed Acyclic Graphs
2017-09-12	womblR	Spatiotemporal Boundary Detection Model for Areal Unit Data
2017-09-11	BayesCR	Bayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
2017-09-11	blocksdesign	Nested and Crossed Block Designs for Factorial, Fractional Factorial and Unstructured Treatment Sets
2017-09-11	bmp	Read Windows Bitmap (BMP) Images
2017-09-11	ccdrAlgorithm	CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
2017-09-11	clhs	Conditioned Latin Hypercube Sampling
2017-09-11	compareDF	Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure
2017-09-11	future.BatchJobs	A Future API for Parallel and Distributed Processing using BatchJobs
2017-09-11	future.batchtools	A Future API for Parallel and Distributed Processing using 'batchtools'
2017-09-11	GauPro	Gaussian Process Fitting
2017-09-11	gmt	Interface Between GMT Map-Making Software and R
2017-09-11	liftLRD	Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series
2017-09-11	ltm	Latent Trait Models under IRT
2017-09-11	mvna	Nelson-Aalen Estimator of the Cumulative Hazard in Multistate Models
2017-09-11	nos	Compute Node Overlap and Segregation in Ecological Networks
2017-09-11	opendotaR	Interface for OpenDota API
2017-09-11	powerlmm	Power Calculations for Longitudinal Multilevel Models
2017-09-11	serial	The Serial Interface Package
2017-09-11	showtextdb	Font Files for the 'showtext' Package
2017-09-11	stdReg	Regression Standardization
2017-09-11	sutteForecastR	Forecasting Data using Alpha-Sutte Indicator
2017-09-11	svglite	An 'SVG' Graphics Device
2017-09-11	TCIApathfinder	Client for the Cancer Imaging Archive REST API
2017-09-11	TideCurves	Analysis and Prediction of Tides
2017-09-11	TideTables	Tide Analysis and Prediction of Predominantly Semi-Diurnal Tides
2017-09-11	yuimaGUI	A Graphical User Interface for the 'yuima' Package
2017-09-10	discretecdAlgorithm	Coordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks
2017-09-10	MTSYS	Methods in Mahalanobis-Taguchi (MT) System
2017-09-10	SNSequate	Standard and Nonstandard Statistical Models and Methods for Test Equating
2017-09-09	arulesViz	Visualizing Association Rules and Frequent Itemsets
2017-09-09	CARS	Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference
2017-09-09	cwhmisc	Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
2017-09-09	fecR	Fishing Effort Calculator in R
2017-09-09	GeoMongo	Geospatial Queries Using 'PyMongo'
2017-09-09	gridExtra	Miscellaneous Functions for "Grid" Graphics
2017-09-09	jointDiag	Joint Approximate Diagonalization of a Set of Square Matrices
2017-09-09	keyring	Access the System Credential Store from R
2017-09-09	metaforest	Exploring Heterogeneity in Meta-Analysis using Random Forests
2017-09-09	psych	Procedures for Psychological, Psychometric, and Personality Research
2017-09-09	RcppRedis	'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
2017-09-09	RTaxometrics	Taxometric Analysis
2017-09-09	sparsebnUtils	Utilities for Learning Sparse Bayesian Networks
2017-09-09	stm	Estimation of the Structural Topic Model
2017-09-08	AdapSamp	Adaptive Sampling Algorithms
2017-09-08	BiDAG	Bayesian Inference for Directed Acyclic Graphs (BiDAG)
2017-09-08	corehunter	Multi-Purpose Core Subset Selection
2017-09-08	DAC	Calculating Data Agreement Criterion Scores to Rank Experts Based on Their Beliefs
2017-09-08	distrr	Estimate and Manage Empirical Distributions
2017-09-08	dMod	Dynamic Modeling and Parameter Estimation in ODE Models
2017-09-08	fdANOVA	Analysis of Variance for Univariate and Multivariate Functional Data
2017-09-08	ForestTools	Analyzing Remotely Sensed Forest Data
2017-09-08	gibble	Component Geometry Decomposition
2017-09-08	graphkernels	Graph Kernels
2017-09-08	openintro	Data Sets and Supplemental Functions from 'OpenIntro' Textbooks
2017-09-08	PhylogeneticEM	Automatic Shift Detection using a Phylogenetic EM
2017-09-08	repurrrsive	Examples of Recursive Lists and Nested or Split Data Frames
2017-09-08	RSiena	Siena - Simulation Investigation for Empirical Network Analysis
2017-09-08	SMM	Simulation and Estimation of Multi-State Discrete-Time Semi-Markov and Markov Models
2017-09-08	textshape	Tools for Reshaping Text
2017-09-08	varbvs	Large-Scale Bayesian Variable Selection Using Variational Methods
2017-09-07	AWR	'AWS' Java 'SDK' for R
2017-09-07	backShift	Learning Causal Cyclic Graphs from Unknown Shift Interventions
2017-09-07	BayLum	Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating
2017-09-07	Bios2cor	From Biological Sequences and Simulations to Correlation Analysis
2017-09-07	cOde	Automated C Code Generation for 'deSolve', 'bvpSolve' and 'Sundials'
2017-09-07	cprr	Functions for Working with Danish CPR Numbers
2017-09-07	ebimetagenomics	EBI Metagenomics Portal
2017-09-07	glmnetcr	Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response
2017-09-07	mapReasy	Producing Administrative Boundary Map with Additional Features Embedded
2017-09-07	modelwordcloud	Model Word Clouds
2017-09-07	multilaterals	Transitive Index Numbers for Cross-Sections and Panel Data
2017-09-07	PakPMICS2014Ch	Multiple Indicator Cluster Survey (MICS) 2014 Child Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014HH	Multiple Indicator Cluster Survey (MICS) 2014 Household Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014HL	Multiple Indicator Cluster Survey (MICS) 2014 Household Listing Questionnaire Data for Punjab, Pakistan
2017-09-07	PakPMICS2014Wm	Multiple Indicator Cluster Survey (MICS) 2014 Women Questionnaire Data for Punjab, Pakistan
2017-09-07	rstudioapi	Safely Access the RStudio API
2017-09-07	Rvcg	Manipulations of Triangular Meshes Based on the 'VCGLIB' API
2017-09-07	simex	SIMEX- And MCSIMEX-Algorithm for Measurement Error Models
2017-09-07	tidyRSS	Tidy RSS for R
2017-09-07	TileManager	Tile Manager
2017-09-07	unjoin	Separate a Data Frame by Normalization
2017-09-07	WordR	Rendering Word Documents with R Inline Code
2017-09-06	BIGDAWG	Case-Control Analysis of Multi-Allelic Loci
2017-09-06	bootnet	Bootstrap Methods for Various Network Estimation Routines
2017-09-06	csabounds	Bounds on Distributional Treatment Effect Parameters
2017-09-06	DiagrammeR	Graph/Network Visualization
2017-09-06	FactorsR	Identification of the Factors Affecting Species Richness
2017-09-06	FRegSigCom	Functional Regression using Signal Compression Approach
2017-09-06	graphicalVAR	Graphical VAR for Experience Sampling Data
2017-09-06	madrat	May All Data be Reproducible and Transparent (MADRaT) *
2017-09-06	magclass	Data Class and Tools for Handling Spatial-Temporal Data
2017-09-06	Ohit	OGA+HDIC+Trim and High-Dimensional Linear Regression Models
2017-09-06	SmoothWin	Soft Windowing on Linear Regression
2017-09-06	spartan	Simulation Parameter Analysis R Toolkit ApplicatioN: Spartan
2017-09-06	SpatialPosition	Spatial Position Models
2017-09-06	SPEDInstabR	Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept
2017-09-06	survPresmooth	Presmoothed Estimation in Survival Analysis
2017-09-06	TNC	Temporal Network Centrality (TNC) Measures
2017-09-06	UdderQuarterInfectionData	Udder Quarter Infection Data
2017-09-06	writexl	Export Data Frames to 'xlsx' Format
2017-09-05	BiodiversityR	Package for Community Ecology and Suitability Analysis
2017-09-05	boostmtree	Boosted Multivariate Trees for Longitudinal Data
2017-09-05	clusterPower	Power Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials
2017-09-05	DMRnet	Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data
2017-09-05	FSelectorRcpp	'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support
2017-09-05	FuzzyNumbers.Ext.2	Apply Two Fuzzy Numbers on a Monotone Function
2017-09-05	genderBR	Predict Gender from Brazilian First Names
2017-09-05	graphql	A GraphQL Query Parser
2017-09-05	meanShiftR	A Computationally Efficient Mean Shift Implementation
2017-09-05	nima	Nima Hejazi's R Toolbox
2017-09-05	psda	Polygonal Symbolic Data Analysis
2017-09-05	rattle	Graphical User Interface for Data Science in R
2017-09-05	RcextTools	Analytical Procedures in Support of Brazilian Public Sector External Auditing
2017-09-05	SpaDES	Develop and Run Spatially Explicit Discrete Event Simulation Models
2017-09-05	VDSPCalibration	Statistical Methods for Designing and Analyzing a Calibration Study
2017-09-05	wooldridge	105 Data Sets from "Introductory Econometrics: A Modern Approach" by Jeffrey M. Wooldridge
2017-09-04	abcrf	Approximate Bayesian Computation via Random Forests
2017-09-04	Barycenter	Regularized Wasserstein Distances and Barycenters
2017-09-04	billboard	Contains Data of Billboard Hot 100 Songs
2017-09-04	BosonSampling	Classical Boson Sampling
2017-09-04	briskaR	Biological Risk Assessment
2017-09-04	cbanalysis	Coffee Break Descriptive Analysis
2017-09-04	CrossVA	Verbal Autopsy Data Transform for Use with Various Coding Algorithms
2017-09-04	dplyrAssist	RStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr'
2017-09-04	freqdom.fda	Functional Time Series: Dynamic Functional Principal Components
2017-09-04	geex	An API for M-Estimation
2017-09-04	jackstraw	Statistical Inference of Variables Driving Systematic Variation
2017-09-04	msBP	Multiscale Bernstein Polynomials for Densities
2017-09-04	re2r	RE2 Regular Expression
2017-09-04	RGeode	Geometric Density Estimation
2017-09-04	sdpt3r	Semi-Definite Quadratic Linear Programming Solver
2017-09-04	threshr	Threshold Selection and Uncertainty for Extreme Value Analysis
2017-09-03	alphavantager	Lightweight R Interface to the Alpha Vantage API
2017-09-03	bairt	Bayesian Analysis of Item Response Theory Models
2017-09-03	doubcens	Survivor Function Estimation for Doubly Interval-Censored Failure Time Data
2017-09-03	ELMSurv	Extreme Learning Machine for Survival Analysis
2017-09-03	hddplot	Use Known Groups in High-Dimensional Data to Derive Scores for Plots
2017-09-03	iMediate	Likelihood Methods for Mediation Analysis
2017-09-03	pcdpca	Dynamic Principal Components for Periodically Correlated Functional Time Series
2017-09-03	ShinyImage	Image Manipulation, with an Emphasis on Journaling
2017-09-02	AlphaVantageClient	Wrapper for Alpha Vantage API
2017-09-02	BinarybalancedCut	Threshold Cut Point of Probability for a Binary Classifier Model
2017-09-02	coreCT	Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging
2017-09-02	Fuzzy.p.value	Computing Fuzzy p-Value
2017-09-02	idem	Inference in Randomized Controlled Trials with Death and Missingness
2017-09-02	lvnet	Latent Variable Network Modeling
2017-09-02	mlVAR	Multi-Level Vector Autoregression
2017-09-02	mmap	Map Pages of Memory
2017-09-02	qgraph	Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
2017-09-02	recosystem	Recommender System using Matrix Factorization
2017-09-02	SpaDES.addins	Development Tools for 'SpaDES' and 'SpaDES' Modules
2017-09-01	afpt	Tools for Modelling of Animal Flight Performance
2017-09-01	AnnotationBustR	Extract Subsequences from GenBank Annotations
2017-09-01	ChemometricsWithR	Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences
2017-09-01	commonmark	High Performance CommonMark and Github Markdown Rendering in R
2017-09-01	copula	Multivariate Dependence with Copulas
2017-09-01	cr17	Testing Differences Between Competing Risks Models and Their Visualisations
2017-09-01	CytobankAPIstats	Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'
2017-09-01	DelayedEffect.Design	Sample Size and Power Calculations using the APPLE and SEPPLE Methods
2017-09-01	DEploid	Deconvolute Mixed Genomes with Unknown Proportions
2017-09-01	EcoIndR	Ecological Indicators
2017-09-01	edrGraphicalTools	Provides Tools for Dimension Reduction Methods
2017-09-01	FactoClass	Combination of Factorial Methods and Cluster Analysis
2017-09-01	fastLink	Fast Probabilistic Record Linkage with Missing Data
2017-09-01	freqdom	Frequency Domain Based Analysis: Dynamic PCA
2017-09-01	gdtools	Utilities for Graphical Rendering
2017-09-01	Inflation	Core Inflation
2017-09-01	jaod	Directory of Open Access Journals Client
2017-09-01	LGEWIS	Tests for Genetic Association/Gene-Environment Interaction in Longitudinal Studies
2017-09-01	NUCOMBog	NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate
2017-09-01	pkggraph	A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories
2017-09-01	protolite	Fast and Simple Object Serialization to Protocol Buffers
2017-09-01	R2MLwiN	Running 'MLwiN' from Within R
2017-09-01	R2SWF	Convert R Graphics to Flash Animations
2017-09-01	rDotNet	Low-Level Interface to the '.NET' Virtual Machine Along the Lines of the R C/Call API
2017-09-01	sptemExp	Constrained Spatiotemporal Mixed Models for Exposure Estimation
2017-09-01	swamp	Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations
2017-09-01	wru	Who are You? Bayesian Prediction of Racial Category Using Surname and Geolocation
2017-08-31	ari	Automated R Instructor
2017-08-31	catR	Generation of IRT Response Patterns under Computerized Adaptive Testing
2017-08-31	cdparcoord	Top Frequency-Based Parallel Coordinates
2017-08-31	itsadug	Interpreting Time Series and Autocorrelated Data Using GAMMs
2017-08-31	lmSupport	Support for Linear Models
2017-08-31	npphen	Vegetation Phenological Cycle and Anomaly Detection using Remote Sensing Data
2017-08-31	openair	Tools for the Analysis of Air Pollution Data
2017-08-31	RcmdrPlugin.EZR	R Commander Plug-in for the EZR (Easy R) Package
2017-08-31	wktmo	Converting Weekly Data to Monthly Data
2017-08-30	benchmarkme	Crowd Sourced System Benchmarks
2017-08-30	cenGAM	Censored Regression with Smooth Terms
2017-08-30	ctmm	Continuous-Time Movement Modeling
2017-08-30	deltar	Calculation of Delta R Values
2017-08-30	DTRreg	DTR Estimation and Inference via G-Estimation, Dynamic WOLS, and Q-Learning
2017-08-30	fastR2	Foundations and Applications of Statistics Using R (2nd Edition)
2017-08-30	h5	Interface to the 'HDF5' Library
2017-08-30	JSM	Semiparametric Joint Modeling of Survival and Longitudinal Data
2017-08-30	nor1mix	Normal (1-d) Mixture Models (S3 Classes and Methods)
2017-08-30	OasisR	Outright Tool for the Analysis of Spatial Inequalities and Segregation
2017-08-30	PIGE	Self Contained Gene Set Analysis for Gene- And Pathway-Environment Interaction Analysis
2017-08-30	plotfunctions	Various Functions to Facilitate Visualization of Data and Analysis
2017-08-30	robets	Forecasting Time Series with Robust Exponential Smoothing
2017-08-30	seedCCA	Seeded Canonical Correlation Analysis
2017-08-30	SpaDES.core	Core Utilities for Developing and Running Spatially Explicit Discrete Event Simulation Models
2017-08-30	xxIRT	Practical Item Response Theory and Computer-Based Testing in R
2017-08-29	Anthropometry	Statistical Methods for Anthropometric Data
2017-08-29	benchmarkmeData	Data Set for the 'benchmarkme' Package
2017-08-29	datapack	A Flexible Container to Transport and Manipulate Data and Associated Resources
2017-08-29	difNLR	Detection of Differential Item Functioning (DIF) and Differential Distractor Functioning (DDF) by Non-Linear Regression Models
2017-08-29	ebmc	Ensemble-Based Methods for Class Imbalance Problem
2017-08-29	enveomics.R	Various Utilities for Microbial Genomics and Metagenomics
2017-08-29	FPV	Testing Hypotheses via Fuzzy P-Value in Fuzzy Environment
2017-08-29	ggconf	Simpler Appearance Modification of 'ggplot2'
2017-08-29	HGNChelper	Handy Functions for Working with HGNC Gene Symbols and Affymetrix Probeset Identifiers
2017-08-29	LowWAFOMSobol	Low WAFOM Sobol Sequence
2017-08-29	mapmisc	Utilities for Producing Maps
2017-08-29	mbir	Magnitude-Based Inferences
2017-08-29	mcompanion	Objects and Methods for Multi-Companion Matrices
2017-08-29	MTE	Maximum Tangent Likelihood and Other Robust Estimation for High-Dimensional Regression
2017-08-29	nomogramEx	Extract Equations from a Nomogram
2017-08-29	PeriodicTable	Periodic Table of the Elements
2017-08-29	poweRlaw	Analysis of Heavy Tailed Distributions
2017-08-29	qgam	Smooth Additive Quantile Regression Models
2017-08-29	sensitivitymult	Sensitivity Analysis for Observational Studies with Multiple Outcomes
2017-08-29	sgPLS	Sparse Group Partial Least Square Methods
2017-08-29	statquotes	Quotes on Statistics, Data Visualization and Science
2017-08-29	texPreview	Compile and Preview Snippets of 'LaTeX' in 'RStudio'
2017-08-29	uptasticsearch	Get Data Frame Representations of 'Elasticsearch' Results
2017-08-28	BAMBI	Bivariate Angular Mixture Models
2017-08-28	BNSP	Bayesian Non- And Semi-Parametric Model Fitting
2017-08-28	caffsim	Simulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model
2017-08-28	carData	Companion to Applied Regression Data Sets
2017-08-28	ccmm	Compositional Mediation Model
2017-08-28	cdfquantreg	Quantile Regression for Random Variables on the Unit Interval
2017-08-28	datetimeutils	Utilities for Dates and Times
2017-08-28	dmutate	Mutate Data Frames with Random Variates
2017-08-28	Eagle	Multiple Locus Association Mapping on a Genome-Wide Scale
2017-08-28	geomerge	Geospatial Data Integration
2017-08-28	googledrive	An Interface to Google Drive
2017-08-28	holdem	Texas Holdem Simulator
2017-08-28	kohonen	Supervised and Unsupervised Self-Organising Maps
2017-08-28	Matrix.utils	Data.frame-Like Operations on Sparse and Dense Matrix Objects
2017-08-28	multinet	Analysis and Mining of Multilayer Social Networks
2017-08-28	MVisAGe	Compute and Visualize Bivariate Associations
2017-08-28	nlts	(Non)Linear Time Series Analysis
2017-08-28	oce	Analysis of Oceanographic Data
2017-08-28	plot3D	Plotting Multi-Dimensional Data
2017-08-28	PSIMEX	SIMEX Algorithm on Pedigree Structures
2017-08-28	qicharts	Quality Improvement Charts
2017-08-28	qualpalr	Automatic Generation of Qualitative Color Palettes
2017-08-28	RcppSMC	Rcpp Bindings for Sequential Monte Carlo
2017-08-28	rebmix	Finite Mixture Modeling, Clustering & Classification
2017-08-28	SpatialEpiApp	A Shiny Web Application for the Analysis of Spatial and Spatio-Temporal Disease Data
2017-08-28	tsensembler	Dynamic Ensembles for Time Series Forecasting
2017-08-27	chinese.misc	Miscellaneous Tools for Chinese Text Mining and More
2017-08-26	cchs	Cox Model for Case-Cohort Data with Stratified Subcohort-Selection
2017-08-26	rredlist	'IUCN' Red List Client
2017-08-25	downscale	Downscaling Species Occupancy
2017-08-25	edpclient	Empirical Data Platform Client
2017-08-25	LowWAFOMNX	Low WAFOM Niederreiter-Xing Sequence
2017-08-25	missRanger	Fast Imputation of Missing Values
2017-08-25	phonics	Phonetic Spelling Algorithms
2017-08-25	prcr	Person-Centered Analysis
2017-08-25	rgr	Applied Geochemistry EDA
2017-08-25	spm	Spatial Predictive Modeling
2017-08-25	webTRISr	A Wrapper Around 'WebTRIS' Traffic Flow API from Highways England
2017-08-24	accSDA	Accelerated Sparse Discriminant Analysis
2017-08-24	BH	Boost C++ Header Files
2017-08-24	celestial	Collection of Common Astronomical Conversion Routines and Functions
2017-08-24	Ecohydmod	Ecohydrological Modelling
2017-08-24	ecoreg	Ecological Regression using Aggregate and Individual Data
2017-08-24	EpiCurve	Plot an Epidemic Curve
2017-08-24	gggenes	Draw Gene Arrow Maps in 'ggplot2'
2017-08-24	mExplorer	Identifying Master Gene Regulators from Gene Expression and DNA-Binding Data
2017-08-24	multdyn	Multiregression Dynamic Models
2017-08-24	mvPot	Multivariate Peaks-over-Threshold Modelling for Spatial Extreme Events
2017-08-24	noncomplyR	Bayesian Analysis of Randomized Experiments with Non-Compliance
2017-08-24	optrdd	Optimized Regression Discontinuity Designs
2017-08-24	saemix	Stochastic Approximation Expectation Maximization (SAEM) Algorithm
2017-08-24	scales	Scale Functions for Visualization
2017-08-24	sensR	Thurstonian Models for Sensory Discrimination
2017-08-24	Strategy	Generic Framework to Analyze Trading Strategies
2017-08-24	sunburstR	'Htmlwidget' for 'Kerry Rodden' 'd3.js' Sequence Sunburst
2017-08-24	tclust	Robust Trimmed Clustering
2017-08-24	worrms	World Register of Marine Species (WoRMS) Client
2017-08-23	ActiveDriver	Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites
2017-08-23	CpGFilter	CpG Filtering Method Based on Intra-Class Correlation Coefficients
2017-08-23	Cyclops	Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
2017-08-23	FPDclustering	PD-Clustering and Factor PD-Clustering
2017-08-23	genepop	Population Genetic Data Analysis Using Genepop
2017-08-23	genotypeR	SNP Genotype Marker Design and Analysis
2017-08-23	kntnr	R Client for 'kintone' API
2017-08-23	macc	Mediation Analysis of Causality under Confounding
2017-08-23	npcp	Some Nonparametric CUSUM Tests for Change-Point Detection in Possibly Multivariate Observations
2017-08-23	precrec	Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) Curves
2017-08-23	projmanr	Project Management Tools
2017-08-23	rmcorr	Repeated Measures Correlation
2017-08-23	RNAsmc	RNA Secondary Structure Module Mining, Comparison and Plotting
2017-08-23	rsconnect	Deployment Interface for R Markdown Documents and Shiny Applications
2017-08-23	SCRSELECT	Performs Bayesian Variable Selection on the Covariates in a Semi-Competing Risks Model
2017-08-23	shiny	Web Application Framework for R
2017-08-23	StepSignalMargiLike	Step-Wise Signal Extraction via Marginal Likelihood
2017-08-22	BPEC	Bayesian Phylogeographic and Ecological Clustering
2017-08-22	ConfigParser	Package to Parse an INI File, Including Variable Interpolation
2017-08-22	crplyr	A 'dplyr' Interface for Crunch
2017-08-22	esreg	Joint Quantile and Expected Shortfall Regression
2017-08-22	factoextra	Extract and Visualize the Results of Multivariate Data Analyses
2017-08-22	geigen	Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack
2017-08-22	iccbeta	Multilevel Model Intraclass Correlation for Slope Heterogeneity
2017-08-22	MendelianRandomization	Mendelian Randomization Package
2017-08-22	nloptr	R interface to NLopt
2017-08-22	pointblank	Validation of Local and Remote Data Tables
2017-08-22	QRegVCM	Quantile Regression in Varying-Coefficient Models
2017-08-22	R2DGC	Multiple Peak Alignment for 2D Gas Chromatography Mass Spectrometry Metabolomics Analysis
2017-08-22	Rmpi	Interface (Wrapper) to MPI (Message-Passing Interface)
2017-08-22	ShinyItemAnalysis	Test and Item Analysis via Shiny
2017-08-22	shp2graph	Convert a SpatialLinesDataFrame Object to an 'igraph'-Class Object
2017-08-22	simpleCache	Simply Caching R Objects
2017-08-22	SLICER	Selective Locally Linear Inference of Cellular Expression Relationships
2017-08-22	STARTdesign	Single to Double Arm Transition Design for Phase II Clinical Trials
2017-08-22	TrendInTrend	Odds Ratio Estimation and Power Calculation for the Trend in Trend Model
2017-08-22	Wrapped	Computes Pdf, Cdf, Quantile, Random Numbers and Provides Estimation for any Univariate Wrapped Distributions
2017-08-22	zic	Bayesian Inference for Zero-Inflated Count Models
2017-08-21	BayesBD	Bayesian Inference for Image Boundaries
2017-08-21	BeviMed	Bayesian Evaluation of Variant Involvement in Mendelian Disease
2017-08-21	cosinor2	Extended Tools for Cosinor Analysis of Rhythms
2017-08-21	descomponer	Seasonal Adjustment by Frequency Analysis
2017-08-21	dynr	Dynamic Modeling in R
2017-08-21	fastcluster	Fast Hierarchical Clustering Routines for R and Python
2017-08-21	InfoTrad	Calculates the Probability of Informed Trading (PIN)
2017-08-21	ircor	Correlation Coefficients for Information Retrieval
2017-08-21	KappaGUI	GUI for Cohen's and Fleiss' Kappa
2017-08-21	vegdata	Access Vegetation Databases and Treat Taxonomy
2017-08-20	blastula	Easily Send HTML Email Messages
2017-08-20	bookdown	Authoring Books and Technical Documents with R Markdown
2017-08-20	ergm	Fit, Simulate and Diagnose Exponential-Family Models for Networks
2017-08-20	GeneralizedUmatrix	Credible Visualization for Two-Dimensional Projections of Data
2017-08-20	GRCdata	Parameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data
2017-08-20	happybiRthday	Calculate Upcoming Birthday Dates of Github Repos
2017-08-20	HSAUR2	A Handbook of Statistical Analyses Using R (2nd Edition)
2017-08-20	httr	Tools for Working with URLs and HTTP
2017-08-20	komadown	R Markdown Templates for the 'KOMA-Script' Classes
2017-08-20	latentnet	Latent Position and Cluster Models for Statistical Networks
2017-08-20	stpm	Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes
2017-08-19	alleHap	Allele Imputation and Haplotype Reconstruction from Pedigree Databases
2017-08-19	ccRemover	Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
2017-08-19	NetworkChange	Bayesian Package for Network Changepoint Analysis
2017-08-18	ahnr	An Implementation of the Artificial Hydrocarbon Networks
2017-08-18	CIAAWconsensus	Isotope Ratio Meta-Analysis
2017-08-18	dataone	R Interface to the DataONE REST API
2017-08-18	fuser	Fused Lasso for High-Dimensional Regression over Groups
2017-08-18	HSAUR	A Handbook of Statistical Analyses Using R (1st Edition)
2017-08-18	HSAUR3	A Handbook of Statistical Analyses Using R (3rd Edition)
2017-08-18	ImputeRobust	Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape
2017-08-18	mHG	Minimum-Hypergeometric Test
2017-08-18	odpc	One-Sided Dynamic Principal Components
2017-08-18	revengc	Reverse Engineering Censored, Decoupled Residential Data for Population Density Estimation
2017-08-18	sasMap	Static 'SAS' Code Analysis
2017-08-18	wppExplorer	Explorer of World Population Prospects
2017-08-17	CompDist	Multisection Composite Distributions
2017-08-17	drtmle	Doubly-Robust Nonparametric Estimation and Inference
2017-08-17	ecoengine	Programmatic Interface to the Web Service Methods Provided by UC Berkeley's Natural History Data
2017-08-17	forwards	Data from Surveys Conducted by Forwards
2017-08-17	FuzzyLP	Fuzzy Linear Programming
2017-08-17	gamCopula	Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas
2017-08-17	hei	Calculate Healthy Eating Index (HEI) Scores
2017-08-17	MODIStsp	A Tool for Automating Download and Preprocessing of MODIS Land Products Data
2017-08-17	outbreaker	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2017-08-17	polysat	Tools for Polyploid Microsatellite Analysis
2017-08-17	PowerTOST	Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
2017-08-17	RefManageR	Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
2017-08-17	textmineR	Functions for Text Mining and Topic Modeling
2017-08-17	zipfR	Statistical Models for Word Frequency Distributions
2017-08-16	AssayCorrector	Detection and Correction of Spatial Bias in HTS Screens
2017-08-16	atlantistools	Process and Visualise Output from Atlantis Models
2017-08-16	bmrm	Bundle Methods for Regularized Risk Minimization Package
2017-08-16	CBCgrps	Compare Baseline Characteristics Between Groups
2017-08-16	diagram	Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams
2017-08-16	HistData	Data Sets from the History of Statistics and Data Visualization
2017-08-16	IceCast	Apply Statistical Post-Processing to Improve Sea Ice Predictions
2017-08-16	markovchain	Easy Handling Discrete Time Markov Chains
2017-08-16	ncar	Noncompartmental Analysis for Pharmacokinetic Report
2017-08-16	NonCompart	Noncompartmental Analysis for Pharmacokinetic Data
2017-08-16	PAC	Partition-Assisted Clustering and Multiple Alignments of Networks
2017-08-16	rmapshaper	Client for 'mapshaper' for 'Geospatial' Operations
2017-08-16	shape	Functions for Plotting Graphical Shapes, Colors
2017-08-16	statnet.common	Common R Scripts and Utilities Used by the Statnet Project Software
2017-08-16	TraMineR	Trajectory Miner: a Toolbox for Exploring and Rendering Sequences
2017-08-16	TraMineRextras	TraMineR Extension
2017-08-16	xmeta	A Toolbox for Multivariate Meta-Analysis
2017-08-16	yuima	The YUIMA Project Package for SDEs
2017-08-15	ggquiver	Quiver Plots for 'ggplot2'
2017-08-15	GrpString	Patterns and Statistical Differences Between Two Groups of Strings
2017-08-15	Lahman	Sean 'Lahman' Baseball Database
2017-08-15	LBSPR	Length-Based Spawning Potential Ratio
2017-08-15	NLP	Natural Language Processing Infrastructure
2017-08-15	pbmcapply	Tracking the Progress of Mc*pply with Progress Bar
2017-08-15	PeakSegDP	Dynamic Programming Algorithm for Peak Detection in ChIP-Seq Data
2017-08-15	PeakSegJoint	Joint Peak Detection in Several ChIP-Seq Samples
2017-08-15	preseqR	Predicting the Number of Species in a Random Sample
2017-08-15	ReacTran	Reactive Transport Modelling in 1d, 2d and 3d
2017-08-15	rexpokit	R Wrappers for EXPOKIT; Other Matrix Functions
2017-08-15	samon	Sensitivity Analysis for Missing Data
2017-08-15	sdmpredictors	Species Distribution Modelling Predictor Datasets
2017-08-15	SorptionAnalysis	Static Adsorption Experiment Plotting and Analysis
2017-08-15	usmap	US Maps Including Alaska and Hawaii
2017-08-15	VineCopula	Statistical Inference of Vine Copulas
2017-08-14	CARBayesST	Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
2017-08-14	CIplot	Functions to Plot Confidence Interval
2017-08-14	ConfoundedMeta	Sensitivity Analyses for Unmeasured Confounding in Meta-Analyses
2017-08-14	fastJT	Efficient Jonckheere-Terpstra Test Statistics for Robust Machine Learning and Genome-Wide Association Studies
2017-08-14	fda	Functional Data Analysis
2017-08-14	IsoriX	Isoscape Computation and Inference of Spatial Origins using Mixed Models
2017-08-14	jtGWAS	Efficient Jonckheere-Terpstra Test Statistics
2017-08-14	ldstatsHD	Linear Dependence Statistics for High-Dimensional Data
2017-08-14	limSolve	Solving Linear Inverse Models
2017-08-14	lmmen	Linear Mixed Model Elastic Net
2017-08-14	MPLikelihoodWB	Modified Profile Likelihood Estimation for Weibull Shape and Regression Parameters
2017-08-14	rbi	R Interface to LibBi
2017-08-14	RealVAMS	Multivariate VAM Fitting
2017-08-14	RMySQL	Database Interface and 'MySQL' Driver for R
2017-08-14	robCompositions	Robust Estimation for Compositional Data
2017-08-14	robustrao	An Extended Rao-Stirling Diversity Index to Handle Missing Data
2017-08-14	rts	Raster Time Series Analysis
2017-08-14	SEERaBomb	SEER and Atomic Bomb Survivor Data Analysis Tools
2017-08-14	smoof	Single and Multi-Objective Optimization Test Functions
2017-08-14	sparsediscrim	Sparse and Regularized Discriminant Analysis
2017-08-14	spef	Semiparametric Estimating Functions
2017-08-14	tesseract	Open Source OCR Engine for R
2017-08-14	tsiR	An Implementation of the TSIR Model
2017-08-14	widyr	Widen, Process, then Re-Tidy Data
2017-08-13	BLPestimatoR	Performs a BLP Demand Estimation
2017-08-13	Delaporte	Statistical Functions for the Delaporte Distribution
2017-08-13	DoE.base	Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
2017-08-13	esvis	Visualization and Estimation of Effect Sizes
2017-08-13	grec	GRadient-Based RECognition of Spatial Patterns in Environmental Data
2017-08-13	kSamples	K-Sample Rank Tests and their Combinations
2017-08-13	OrgMassSpecR	Organic Mass Spectrometry
2017-08-13	osmdata	Import 'OpenStreetMap' Data as Simple Features or Spatial Objects
2017-08-13	rdpla	Client for the Digital Public Library of America ('DPLA')
2017-08-13	threejs	Interactive 3D Scatter Plots, Networks and Globes
2017-08-12	ClustOfVar	Clustering of Variables
2017-08-12	crminer	Fetch 'Scholary' Full Text from 'Crossref'
2017-08-12	dataMeta	Create and Append a Data Dictionary for an R Dataset
2017-08-12	rmapzen	Client for the 'Mapzen' API
2017-08-12	SpaDES.tools	Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models
2017-08-11	biospear	Biomarker Selection in Penalized Regression Models
2017-08-11	depend.truncation	Statistical Inference for Parametric and Semiparametric Models Based on Dependently Truncated Data
2017-08-11	IAbin	Plotting N-T Plane for Decision on Performing an Interim Analysis
2017-08-11	rasterList	A Raster Where Cells are Generic Objects
2017-08-11	rcv	Ranked Choice Voting
2017-08-11	rtimes	Client for New York Times 'APIs'
2017-08-11	strvalidator	Process Control and Internal Validation of Forensic STR Kits
2017-08-11	TreatmentSelection	Evaluate Treatment Selection Biomarkers
2017-08-11	valaddin	Functional Input Validation
2017-08-11	vanddraabe	Identification and Statistical Analysis of Conserved Waters in Proteins
2017-08-10	BCEE	The Bayesian Causal Effect Estimation Algorithm
2017-08-10	cholera	Amend, Augment and Aid Analysis of John Snow's Cholera Data
2017-08-10	CytobankAPI	Cytobank API Wrapper for R
2017-08-10	gamlss.spatial	Spatial Terms in Generalized Additive Models for Location Scale and Shape Models
2017-08-10	networktools	Tools for Identifying Important Nodes in Networks
2017-08-10	reproducible	A Set of Tools that Enhance Reproducibility Beyond Package Management
2017-08-10	RKEEL	Using Keel in R Code
2017-08-10	SALTSampler	Efficient Sampling on the Simplex
2017-08-10	vocaldia	Create and Manipulate Vocalisation Diagrams
2017-08-09	clue	Cluster Ensembles
2017-08-09	Epi	A Package for Statistical Analysis in Epidemiology
2017-08-09	eurostat	Tools for Eurostat Open Data
2017-08-09	GEint	Misspecified Models for Gene-Environment Interaction
2017-08-09	geomorph	Geometric Morphometric Analyses of 2D/3D Landmark Data
2017-08-09	gsw	Gibbs Sea Water Functions
2017-08-09	IPMRF	Intervention in Prediction Measure (IPM) for Random Forests
2017-08-09	MBSGS	Multivariate Bayesian Sparse Group Selection with Spike and Slab
2017-08-09	naniar	Data Structures, Summaries, and Visualisations for Missing Data
2017-08-09	openSTARS	An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
2017-08-09	phylocurve	Phylogenetic Comparative Methods for High-Dimensional Traits
2017-08-09	plotROC	Generate Useful ROC Curve Charts for Print and Interactive Use
2017-08-09	poker	Play Texas Hold Em Poker
2017-08-09	ProjectTemplate	Automates the Creation of New Statistical Analysis Projects
2017-08-09	PsyControl	CUSUM Person Fit Statistics
2017-08-09	RcmdrPlugin.RiskDemo	R Commander Plug-in for Risk Demonstration
2017-08-09	relations	Data Structures and Algorithms for Relations
2017-08-09	retistruct	Retinal Reconstruction Program
2017-08-09	xaringan	Presentation Ninja
2017-08-09	zCompositions	Treatment of Zeros and Nondetects in Compositional Data Sets
2017-08-08	EbayesThresh	Empirical Bayes Thresholding and Related Methods
2017-08-08	fivethirtyeight	Data and Code Behind the Stories and Interactives at 'FiveThirtyEight'
2017-08-08	hydroGOF	Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series
2017-08-08	kangar00	Kernel Approaches for Nonlinear Genetic Association Regression
2017-08-08	kml3d	K-Means for Joint Longitudinal Data
2017-08-08	lumberjack	Track Changes in Data
2017-08-08	npbr	Nonparametric Boundary Regression
2017-08-08	OHPL	Ordered Homogeneity Pursuit Lasso for Group Variable Selection
2017-08-08	pec	Prediction Error Curves for Risk Prediction Models in Survival Analysis
2017-08-08	plaqr	Partially Linear Additive Quantile Regression
2017-08-08	randomizeR	Randomization for Clinical Trials
2017-08-08	raw	R Actuarial Workshops
2017-08-08	RcmdrPlugin.aRnova	R Commander Plug-in for Repeated-Measures ANOVA
2017-08-08	RMark	R Code for Mark Analysis
2017-08-08	simPop	Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
2017-08-08	skmeans	Spherical k-Means Clustering
2017-08-08	spatialkernel	Non-Parametric Estimation of Spatial Segregation in a Multivariate Point Process
2017-08-08	vegtable	Handling Vegetation Data Sets
2017-08-07	aiRthermo	Atmospheric Thermodynamics and Visualization
2017-08-07	blink	Record Linkage for Empirically Motivated Priors
2017-08-07	blsAPI	Request Data from the U.S. Bureau of Labor Statistics API
2017-08-07	default	Change the Default Arguments in R Functions
2017-08-07	dggridR	Discrete Global Grids for R
2017-08-07	dlstats	Download Stats of R Packages
2017-08-07	ggbeeswarm	Categorical Scatter (Violin Point) Plots
2017-08-07	hydroTSM	Time Series Management, Analysis and Interpolation for Hydrological Modelling
2017-08-07	multiCA	Multinomial Cochran-Armitage Trend Test
2017-08-07	permGS	Permutational Group Sequential Test for Time-to-Event Data
2017-08-07	sparsepp	'Rcpp' Interface to 'sparsepp'
2017-08-07	statesRcontiguous	Shapefiles for the Contiguous United States of America
2017-08-07	tsPI	Improved Prediction Intervals for ARIMA Processes and Structural Time Series
2017-08-07	usl	Analyze System Scalability with the Universal Scalability Law
2017-08-07	validate	Data Validation Infrastructure
2017-08-07	walrus	Robust Statistical Methods
2017-08-06	corregp	Functions and Methods for Correspondence Regression
2017-08-06	pander	An R 'Pandoc' Writer
2017-08-06	reshape	Flexibly Reshape Data
2017-08-06	restfulr	R Interface to RESTful Web Services
2017-08-06	rsolr	R to Solr Interface
2017-08-06	VARtests	Tests for Error Autocorrelation and ARCH Errors in Vector Autoregressive Models
2017-08-05	cetcolor	CET Perceptually Uniform Colour Maps
2017-08-05	ggversa	Graficas Versatiles Con 'ggplot2'
2017-08-05	italy	The Italian Survey on Household and Wealth, 2008 and 2010
2017-08-05	iterLap	Approximate Probability Densities by Iterated Laplace Approximations
2017-08-05	itunesr	To Access iTunes App Store Ratings and Reviews using R
2017-08-05	ldhmm	Hidden Markov Model for Financial Time-Series Based on Lambda Distribution
2017-08-05	MCPMod	Design and Analysis of Dose-Finding Studies
2017-08-05	r2glmm	Computes R Squared for Mixed (Multilevel) Models
2017-08-05	WGCNA	Weighted Correlation Network Analysis
2017-08-04	CrossValidate	Classes and Methods for Cross Validation of "Class Prediction" Algorithms
2017-08-04	equaltestMI	Examine Measurement Invariance via Equivalence Testing and Projection Method
2017-08-04	GFA	Group Factor Analysis
2017-08-04	ITGM	Individual Tree Growth Modeling
2017-08-04	lctools	Local Correlation, Spatial Inequalities, Geographically Weighted Regression and Other Tools
2017-08-04	MCMCprecision	Precision of Discrete Parameters in Transdimensional MCMC
2017-08-04	MCS	Model Confidence Set Procedure
2017-08-04	metaBMA	Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis
2017-08-04	microPop	Modelling Microbial Populations
2017-08-04	mixedsde	Estimation Methods for Stochastic Differential Mixed Effects Models
2017-08-04	RankAggreg	Weighted Rank Aggregation
2017-08-04	RcppXPtrUtils	XPtr Add-Ons for 'Rcpp'
2017-08-04	soilcarbon	Tools to Analyze Soil Carbon Database Created by Powell Center Working Group
2017-08-04	SpatialAcc	Spatial Accessibility Measures
2017-08-04	spbabel	Convert Spatial Data Using Tidy Tables
2017-08-03	banR	R Client for the BAN API
2017-08-03	BIEN	Tools for Accessing the Botanical Information and Ecology Network Database
2017-08-03	cranlike	Tools for 'CRAN'-Like Repositories
2017-08-03	desc	Manipulate DESCRIPTION Files
2017-08-03	echogram	Echogram Visualisation and Analysis
2017-08-03	eggCounts	Hierarchical Modelling of Faecal Egg Counts
2017-08-03	EMAtools	Data Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data
2017-08-03	GAparsimony	Searching Parsimony Models with Genetic Algorithms
2017-08-03	ggsignif	Significance Brackets for 'ggplot2'
2017-08-03	glmBfp	Bayesian Fractional Polynomials for GLMs
2017-08-03	Grid2Polygons	Convert Spatial Grids to Polygons
2017-08-03	IntegratedJM	Joint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature
2017-08-03	irace	Iterated Racing for Automatic Algorithm Configuration
2017-08-03	lmmpar	Parallel Linear Mixed Model
2017-08-03	multistate	Fitting Multistate Models
2017-08-03	rddensity	Manipulation Testing Based on Density Discontinuity
2017-08-03	SKAT	SNP-Set (Sequence) Kernel Association Test
2017-08-03	spex	Spatial Extent as Polygons with Projection
2017-08-03	svenssonm	Svensson's Method
2017-08-03	tidyquant	Tidy Quantitative Financial Analysis
2017-08-02	adaptiveGPCA	Adaptive Generalized PCA
2017-08-02	ambhasGW	Ground Water Modelling
2017-08-02	geohash	Tools for Geohash Creation and Manipulation
2017-08-02	GGally	Extension to 'ggplot2'
2017-08-02	GreedyEPL	Greedy Expected Posterior Loss
2017-08-02	IrishDirectorates	Irish Companies' Boards from 2003 to 2013
2017-08-02	lmom	L-Moments
2017-08-02	lmomRFA	Regional Frequency Analysis using L-Moments
2017-08-02	MixtureRegLTIC	Mixture Regression Models for Left-Truncated and Interval-Censored Data
2017-08-02	NPflow	Bayesian Nonparametrics for Automatic Gating of Flow-Cytometry Data
2017-08-02	rgeolocate	IP Address Geolocation
2017-08-02	rtimicropem	Supports the Analysis of RTI MicroPEM Output Files
2017-08-02	Sequential	Exact Sequential Analysis for Poisson and Binomial Data
2017-08-02	shinystan	Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models
2017-08-02	subgroup.discovery	Subgroup Discovery and Bump Hunting
2017-08-02	tbl2xts	Convert Tibbles or Data Frames to Xts Easily
2017-08-02	ThermIndex	Calculate Thermal Indexes
2017-08-02	tourr	Implement Tour Methods in R Code
2017-08-01	censusapi	Retrieve Data from the Census APIs
2017-08-01	dejaVu	Multiple Imputation for Recurrent Events
2017-08-01	dfped	Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies
2017-08-01	DoEstRare	Rare Variant Association Test Based on Position Density Estimation
2017-08-01	eco	Ecological Inference in 2x2 Tables
2017-08-01	fasjem	A Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models
2017-08-01	glmnetUtils	Utilities for 'Glmnet'
2017-08-01	hIRT	Hierarchical Item Response Theory Models
2017-08-01	iqspr	Inverse Molecular Design
2017-08-01	kpmt	Known Population Median Test
2017-08-01	merDeriv	Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
2017-08-01	Rborist	Extensible, Parallelizable Implementation of the Random Forest Algorithm
2017-08-01	rmda	Risk Model Decision Analysis
2017-08-01	seqinr	Biological Sequences Retrieval and Analysis
2017-08-01	structree	Tree-Structured Clustering
2017-07-31	bio3d	Biological Structure Analysis
2017-07-31	CompareCausalNetworks	Interface to Diverse Estimation Methods of Causal Networks
2017-07-31	GeNetIt	Spatial Graph-Theoretic Genetic Gravity Modelling
2017-07-31	GWRM	Generalized Waring Regression Model for Count Data
2017-07-31	LindenmayeR	Functions to Explore L-Systems (Lindenmayer Systems)
2017-07-31	nonlinearICP	Invariant Causal Prediction for Nonlinear Models
2017-07-31	optional	Optional Types and Pattern Matching
2017-07-31	quickblock	Quick Threshold Blocking
2017-07-31	RODBCext	Parameterized Queries Extension for RODBC
2017-07-31	SimComp	Simultaneous Comparisons for Multiple Endpoints
2017-07-31	stringdist	Approximate String Matching and String Distance Functions
2017-07-31	utiml	Utilities for Multi-Label Learning
2017-07-30	boot	Bootstrap Functions (Originally by Angelo Canty for S)
2017-07-30	BSDA	Basic Statistics and Data Analysis
2017-07-30	highfrequency	Tools for Highfrequency Data Analysis
2017-07-30	lvec	Out of Memory Vectors
2017-07-30	phybreak	Analysis of Outbreaks with Sequence Data
2017-07-30	processx	Execute and Control System Processes
2017-07-30	pseudo	Computes Pseudo-Observations for Modeling
2017-07-30	rtk	Rarefaction Tool Kit
2017-07-29	blandr	Bland-Altman Method Comparison
2017-07-29	fChange	Change Point Analysis in Functional Data
2017-07-29	MasterBayes	ML and MCMC Methods for Pedigree Reconstruction and Analysis
2017-07-29	plotly	Create Interactive Web Graphics via 'plotly.js'
2017-07-29	rAverage	Parameter Estimation for the Averaging Model of Information Integration Theory
2017-07-29	rclipboard	Shiny/R Wrapper for 'clipboard.js'
2017-07-29	RkMetrics	Hybrid Mortality Estimation
2017-07-29	sdcTable	Methods for Statistical Disclosure Control in Tabular Data
2017-07-29	soilwater	Implementation of Parametric Formulas for Soil Water Retention or Conductivity Curve
2017-07-28	CDVineCopulaConditional	Sampling from Conditional C- and D-Vine Copulas
2017-07-28	gamsel	Fit Regularization Path for Generalized Additive Models
2017-07-28	HiveR	2D and 3D Hive Plots for R
2017-07-28	idmTPreg	Regression Model for Progressive Illness Death Data
2017-07-28	incadata	Recognize and Handle Data in Formats Used by Swedish Cancer Centers
2017-07-28	js	Tools for Working with JavaScript in R
2017-07-28	mmtsne	Multiple Maps t-SNE
2017-07-28	optimsimplex	R Port of the 'Scilab' Optimsimplex Module
2017-07-28	rmatio	Read and Write 'Matlab' Files
2017-07-27	arulesCBA	Classification Based on Association Rules
2017-07-27	Delta	Measure of Agreement Between Two Raters
2017-07-27	dHSIC	Independence Testing via Hilbert Schmidt Independence Criterion
2017-07-27	diagis	Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling
2017-07-27	fastR	Foundations and Applications of Statistics Using R
2017-07-27	lsplsGlm	Classification using LS-PLS for Logistic Regression
2017-07-27	mosaicCalc	Function-Based Numerical and Symbolic Differentiation and Antidifferentiation
2017-07-27	optiSolve	Linear, Quadratic, and Rational Optimization
2017-07-27	plotmo	Plot a Model's Response and Residuals
2017-07-27	RHMS	Hydrologic Modelling System for R Users
2017-07-27	simsurv	Simulate Survival Data
2017-07-27	subselect	Selecting Variable Subsets
2017-07-27	windfarmGA	Genetic Algorithm for Wind Farm Layout Optimization
2017-07-26	CensMixReg	Censored Linear Mixture Regression Models
2017-07-26	exCon	Interactive Exploration of Contour Data
2017-07-26	ggpval	Annotate Statistical Tests for 'ggplot2'
2017-07-26	gifti	Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
2017-07-26	iRF	iterative Random Forests
2017-07-26	loon	Interactive Statistical Data Visualization
2017-07-26	maxTPR	Maximizing the TPR for a Specified FPR
2017-07-26	mirtCAT	Computerized Adaptive Testing with Multidimensional Item Response Theory
2017-07-26	sandwich	Robust Covariance Matrix Estimators
2017-07-26	sdm	Species Distribution Modelling
2017-07-26	SpecHelpers	Spectroscopy Related Utilities
2017-07-26	sweep	Tidy Tools for Forecasting
2017-07-26	table1xls	Exports Reproducible Summary Tables to Multi-Tab Spreadsheet Files (.xls or .xlsx)
2017-07-26	unrepx	Analysis and Graphics for Unreplicated Experiments
2017-07-25	aniDom	Inferring Dominance Hierarchies and Estimating Uncertainty
2017-07-25	bayeslongitudinal	Adjust Longitudinal Regression Models Using Bayesian Methodology
2017-07-25	CerioliOutlierDetection	Outlier Detection Using the Iterated RMCD Method of Cerioli (2010)
2017-07-25	concaveman	A Very Fast 2D Concave Hull Algorithm
2017-07-25	datasus	An Interface to DATASUS System
2017-07-25	gamm4	Generalized Additive Mixed Models using 'mgcv' and 'lme4'
2017-07-25	ggseqlogo	A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
2017-07-25	MiRKAT	Microbiome Regression-Based Kernel Association Test
2017-07-25	MRTSampleSize	A Sample Size Calculator for Micro-Randomized Trials
2017-07-25	netCoin	Interactive Networks with R
2017-07-25	PowerNormal	Power Normal Distribution
2017-07-25	qtlmt	Tools for Mapping Multiple Complex Traits
2017-07-25	RxnSim	Functions to Compute Chemical Reaction Similarity
2017-07-25	seqICP	Sequential Invariant Causal Prediction
2017-07-25	sequoia	Pedigree Inference from SNPs
2017-07-25	sidrar	An Interface to IBGE's SIDRA API
2017-07-25	timetk	A Tool Kit for Working with Time Series in R
2017-07-25	treeDA	Tree-Based Discriminant Analysis
2017-07-25	VGAM	Vector Generalized Linear and Additive Models
2017-07-25	WhatIf	Evaluate Counterfactuals
2017-07-24	APSIM	General Utility Functions for the 'Agricultural Production Systems Simulator'
2017-07-24	devEMF	EMF Graphics Output Device
2017-07-24	EFS	Tool for Ensemble Feature Selection
2017-07-24	estprod	Estimation of Production Functions
2017-07-24	GGEBiplots	GGE Biplots with 'ggplot2'
2017-07-24	gIPFrm	Generalized Iterative Proportional Fitting for Relational Models
2017-07-24	l0ara	Sparse Generalized Linear Model with L0 Approximation for Feature Selection
2017-07-24	modelr	Modelling Functions that Work with the Pipe
2017-07-24	pcensmix	Model Fitting to Progressively Censored Mixture Data
2017-07-24	reproducer	Reproduce Statistical Analyses and Meta-Analyses
2017-07-24	simglm	Simulate Models Based on the Generalized Linear Model
2017-07-24	spup	Spatial Uncertainty Propagation Analysis
2017-07-23	aRpsDCA	Arps Decline Curve Analysis in R
2017-07-23	c2c	Compare Two Classifications or Clustering Solutions of Varying Structure
2017-07-23	geoGAM	Select Sparse Geoadditive Models for Spatial Prediction
2017-07-23	mboost	Model-Based Boosting
2017-07-23	RQDA	R-Based Qualitative Data Analysis
2017-07-23	wgeesel	Weighted Generalized Estimating Equations and Model Selection
2017-07-22	dsmodels	A Language to Facilitate Simulation and Visualization of Two-Dimensional Dynamical Systems
2017-07-22	faoutlier	Influential Case Detection Methods for Factor Analysis and Structural Equation Models
2017-07-22	modules	Self Contained Units of Source Code
2017-07-22	prisonbrief	Downloads and Parses World Prison Brief Data
2017-07-22	valr	Genome Interval Arithmetic in R
2017-07-22	vcov	Variance-Covariance Matrices and Standard Errors
2017-07-21	bayesm	Bayesian Inference for Marketing/Micro-Econometrics
2017-07-21	bdvis	Biodiversity Data Visualizations
2017-07-21	bold	Interface to Bold Systems API
2017-07-21	FuzzyStatProb	Fuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain
2017-07-21	getPass	Masked User Input
2017-07-21	igraph	Network Analysis and Visualization
2017-07-21	IMPACT	The Impact of Items
2017-07-21	metansue	Meta-Analysis of Studies with Non Statistically-Significant Unreported Effects
2017-07-21	minerva	Maximal Information-Based Nonparametric Exploration for Variable Analysis
2017-07-21	moveHMM	Animal Movement Modelling using Hidden Markov Models
2017-07-21	pollen	Analysis of Aerobiological Data
2017-07-21	Rdrools	A Rules Engine Based on 'Drools'
2017-07-21	RSiteCatalyst	R Client for Adobe Analytics API V1.4
2017-07-21	spgs	Statistical Patterns in Genomic Sequences
2017-07-21	spNNGP	Spatial Regression Models for Large Datasets using Nearest Neighbor Gaussian Processes
2017-07-20	ChaosGame	Chaos Game
2017-07-20	DCA	Dynamic Correlation Analysis for High Dimensional Data
2017-07-20	pcaL1	L1-Norm PCA Methods
2017-07-20	pdp	Partial Dependence Plots
2017-07-20	productivity	Indices of Productivity Using Data Envelopment Analysis (DEA)
2017-07-20	spark	'Sparklines' in the 'R' Terminal
2017-07-19	atus	American Time Use Survey Data
2017-07-19	BayesianGLasso	Bayesian Graphical Lasso
2017-07-19	beginr	Functions for R Beginners
2017-07-19	corHMM	Analysis of Binary Character Evolution
2017-07-19	Counterfactual	Estimation and Inference Methods for Counterfactual Analysis
2017-07-19	cubature	Adaptive Multivariate Integration over Hypercubes
2017-07-19	datadogr	R Client for 'Datadog' API
2017-07-19	drfit	Dose-Response Data Evaluation
2017-07-19	FastSF	Fast Structural Filtering
2017-07-19	geofacet	'ggplot2' Faceting Utilities for Geographical Data
2017-07-19	harmonicmeanp	Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood
2017-07-19	ibmdbR	IBM in-Database Analytics for R
2017-07-19	ivregEX	Create Independent Evidence in IV Analyses and Do Sensitivity Analysis in Regression and IV Analysis
2017-07-19	knitrBootstrap	'knitr' Bootstrap Framework
2017-07-19	liquidSVM	A Fast and Versatile SVM Package
2017-07-19	mindr	Convert Files Between Markdown or Rmarkdown Files and Mindmaps
2017-07-19	neat	Efficient Network Enrichment Analysis Test
2017-07-19	OBRE	Optimal B-Robust Estimator Tools
2017-07-19	refimpact	API Wrapper for the UK REF 2014 Impact Case Studies Database
2017-07-19	scifigure	Visualize Reproducibility and Replicability in a Comparison of Scientific Studies
2017-07-19	sfinx	Straightforward Filtering Index for AP-MS Data Analysis (SFINX)
2017-07-19	spBayes	Univariate and Multivariate Spatial-Temporal Modeling
2017-07-19	stabs	Stability Selection with Error Control
2017-07-19	subscreen	Systematic Screening of Study Data for Subgroup Effects
2017-07-19	surveydata	Tools to Work with Survey Data
2017-07-19	sybil	Efficient Constrained Based Modelling
2017-07-18	bsplinePsd	Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors
2017-07-18	denoiSeq	Differential Expression Analysis Using a Bottom-Up Model
2017-07-18	diffpriv	Easy Differential Privacy
2017-07-18	kerndwd	Distance Weighted Discrimination (DWD) and Kernel Methods
2017-07-18	mbbefd	Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling
2017-07-18	optparse	Command Line Option Parser
2017-07-18	ouch	Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2017-07-18	pinyin	Convert Chinese Characters into Pinyin
2017-07-18	ratios	Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants
2017-07-18	RcppAPT	'Rcpp' Interface to the APT Package Manager
2017-07-18	riverdist	River Network Distance Computation and Applications
2017-07-18	rodham	Fetch Hillary Rodham Clinton's Emails
2017-07-18	Rvmmin	Variable Metric Nonlinear Function Minimization
2017-07-18	social	Social Autocorrelation
2017-07-18	subplex	Unconstrained Optimization using the Subplex Algorithm
2017-07-18	SuperLearner	Super Learner Prediction
2017-07-18	toOrdinal	Cardinal to Ordinal Number Conversion
2017-07-18	wfe	Weighted Linear Fixed Effects Regression Models for Causal Inference
2017-07-17	brlrmr	Bias Reduction with Missing Binary Response
2017-07-17	Census2016	Data from the Australian Census 2016
2017-07-17	cnbdistr	Conditional Negative Binomial Distribution
2017-07-17	corr2D	Implementation of 2D Correlation Analysis in R
2017-07-17	ercv	Fitting Tails by the Empirical Residual Coefficient of Variation
2017-07-17	flexsurvcure	Flexible Parametric Cure Models
2017-07-17	fragilityindex	Fragility Index
2017-07-17	ggtern	An Extension to 'ggplot2', for the Creation of Ternary Diagrams
2017-07-17	Hotelling	Hotelling's T^2 Test and Variants
2017-07-17	LCox	A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data
2017-07-17	mclogit	Mixed Conditional Logit Models
2017-07-17	mixsmsn	Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
2017-07-17	multiApply	Apply Functions to Multiple Multidimensional Arguments
2017-07-17	PearsonDS	Pearson Distribution System
2017-07-17	sergeant	Tools to Transform and Query Data with 'Apache' 'Drill'
2017-07-17	spc4sts	Statistical Process Control for Stochastic Textured Surfaces
2017-07-17	timeSeq	Detecting Differentially Expressed Genes in Time Course RNA-Seq Data
2017-07-16	gh	'GitHub' 'API'
2017-07-16	llogistic	The L-Logistic Distribution
2017-07-16	paco	Procrustes Application to Cophylogenetic Analysis
2017-07-16	rPraat	Interface to Praat
2017-07-16	senstrat	Sensitivity Analysis for Stratified Observational Studies
2017-07-16	vembedr	Functions to Embed Video in HTML
2017-07-15	centiserve	Find Graph Centrality Indices
2017-07-15	docker	Wraps Docker Python SDK
2017-07-15	DrImpute	Imputing Dropout Events in Single-Cell RNA-Sequencing Data
2017-07-15	mapedit	Interactive Editing of Spatial Data in R
2017-07-15	randomForestExplainer	Explaining and Visualizing Random Forests in Terms of Variable Importance
2017-07-15	spongecake	Transform a Movie into a Synthetic Picture
2017-07-15	tetraclasse	Satisfaction Analysis using Tetraclasse Model and Llosa Matrix
2017-07-15	TSF	Two Stage Forecasting (TSF) for Long Memory Time Series in Presence of Structural Break
2017-07-14	BimodalIndex	The Bimodality Index
2017-07-14	ClustGeo	Hierarchical Clustering with Spatial Constraints
2017-07-14	credsubs	Credible Subsets
2017-07-14	deSolve	Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE')
2017-07-14	geotoolsR	Tools to Improve the Use of Geostatistic
2017-07-14	grt	General Recognition Theory
2017-07-14	mize	Unconstrained Numerical Optimization Algorithms
2017-07-14	MplusAutomation	Automating Mplus Model Estimation and Interpretation
2017-07-14	sitreeE	Sitree Extensions
2017-07-14	stoRy	Theme Enrichment Analysis for Stories
2017-07-14	survtmle	Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings
2017-07-14	teachingApps	Apps for Teaching Statistics, R Programming, and Shiny App Development
2017-07-13	acebayes	Optimal Bayesian Experimental Design using the ACE Algorithm
2017-07-13	ClusVis	Gaussian-Based Visualization of Generic Model-Based Clustering
2017-07-13	ecodist	Dissimilarity-Based Functions for Ecological Analysis
2017-07-13	GenAlgo	Classes and Methods to Use Genetic Algorithms for Feature Selection
2017-07-13	ICEbox	Individual Conditional Expectation Plot Toolbox
2017-07-13	interfr	Interference Color Charts for Polarized Light Microscopy
2017-07-13	Modeler	Classes and Methods for Training and Using Binary Prediction Models
2017-07-13	mountainplot	Mountain Plots, Folded Empirical Cumulative Distribution Plots
2017-07-13	mwaved	Multichannel Wavelet Deconvolution with Additive Long Memory Noise
2017-07-13	noaastormevents	Explore NOAA Storm Events Database
2017-07-13	pagenum	Put Page Numbers on Graphics
2017-07-13	PreProcess	Basic Functions for Pre-Processing Microarrays
2017-07-13	RNRCS	Download NRCS Data
2017-07-13	RPresto	DBI Connector to Presto
2017-07-13	RTriangle	Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
2017-07-13	swmmr	R Interface for US EPA's SWMM
2017-07-13	UBL	An Implementation of Re-Sampling Approaches to Utility-Based Learning for Both Classification and Regression Tasks
2017-07-12	adepro	A Shiny Application for the (Audio-)Visualization of Adverse Event Profiles
2017-07-12	BayesianNetwork	Bayesian Network Modeling and Analysis
2017-07-12	CEGO	Combinatorial Efficient Global Optimization
2017-07-12	ClassDiscovery	Classes and Methods for "Class Discovery" with Microarrays or Proteomics
2017-07-12	facebook.S4	Access to Facebook API V2 via a Set of S4 Classes
2017-07-12	hommel	Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method
2017-07-12	interim	Scheduling Interim Analyses in Clinical Trials
2017-07-12	JOUSBoost	Implements Under/Oversampling for Probability Estimation
2017-07-12	MAVIS	Meta Analysis via Shiny
2017-07-12	multisensi	Multivariate Sensitivity Analysis
2017-07-12	openwindfarm	API Client for ENGIE's Open Wind Farm
2017-07-12	patentsview	An R Client to the PatentsView API
2017-07-12	pcalg	Methods for Graphical Models and Causal Inference
2017-07-12	PeakSegOptimal	Optimal Segmentation Subject to Up-Down Constraints
2017-07-12	rLiDAR	LiDAR Data Processing and Visualization
2017-07-12	SIBERG	Systematic Identification of Bimodally Expressed Genes Using RNAseq Data
2017-07-12	SmoothHazard	Estimation of Smooth Hazard Models for Interval-Censored Data with Applications to Survival and Illness-Death Models
2017-07-12	VCA	Variance Component Analysis
2017-07-12	WeightedROC	Fast, Weighted ROC Curves
2017-07-11	ClassComparison	Classes and Methods for "Class Comparison" Problems on Microarrays
2017-07-11	cmsaf	Tools for CM SAF NetCDF Data
2017-07-11	GenomicTools	Collection of Tools for Genomic Data Analysis
2017-07-11	integIRTy	Integrating Multiple Modalities of High Throughput Assays Using Item Response Theory
2017-07-11	mediation	Causal Mediation Analysis
2017-07-11	multgee	GEE Solver for Correlated Nominal or Ordinal Multinomial Responses
2017-07-11	NameNeedle	Using Needleman-Wunsch to Match Sample Names
2017-07-11	onion	Octonions and Quaternions
2017-07-11	qcc	Quality Control Charts
2017-07-11	RcmdrPlugin.temis	Graphical Integrated Text Mining Solution
2017-07-11	roots	Reconstructing Ordered Ontogenic Trajectories
2017-07-11	samplingVarEst	Sampling Variance Estimation
2017-07-11	SensusR	Sensus Analytics
2017-07-11	ShrinkCovMat	Shrinkage Covariance Matrix Estimators
2017-07-11	SimCorMultRes	Simulates Correlated Multinomial Responses
2017-07-11	TailRank	The Tail-Rank Statistic
2017-07-11	TTR	Technical Trading Rules
2017-07-11	Umpire	Simulating Realistic Gene Expression Data
2017-07-11	visdat	Preliminary Data Visualisation
2017-07-11	VRPM	Visualizing Risk Prediction Models
2017-07-10	AutoDeskR	An Interface to the 'AutoDesk' 'API' Platform
2017-07-10	dGAselID	Genetic Algorithm with Incomplete Dominance for Feature Selection
2017-07-10	ecr	Evolutionary Computation in R
2017-07-10	enviGCMS	GC/LC-MS Data Analysis for Environmental Science
2017-07-10	Formula	Extended Model Formulas
2017-07-10	FUNLDA	Genomic Latent Dirichlet Allocation
2017-07-10	island	Stochastic Island Biogeography Theory Made Easy
2017-07-10	KRLS	Kernel-Based Regularized Least Squares
2017-07-10	MitISEM	Mixture of Student t Distributions using Importance Sampling and Expectation Maximization
2017-07-10	netcom	Dynamic Network Alignment
2017-07-10	OAIHarvester	Harvest Metadata Using OAI-PMH Version 2.0
2017-07-10	oompaData	Data to Illustrate OOMPA Algorithms
2017-07-10	pkr	Pharmacokinetics in R
2017-07-10	PoloniexR	Interface to the Poloniex Cryptocurrency Trading API
2017-07-10	rvcheck	R/Package Version Check
2017-07-10	SFS	Similarity-First Search Seriation Algorithm
2017-07-10	varSelRF	Variable Selection using Random Forests
2017-07-10	wikilake	Scrape Lake Metadata Tables from Wikipedia
2017-07-09	binequality	Methods for Analyzing Binned Income Data
2017-07-09	Ckmeans.1d.dp	Optimal and Fast Univariate Clustering
2017-07-09	contfrac	Continued Fractions
2017-07-09	CRTgeeDR	Doubly Robust Inverse Probability Weighted Augmented GEE Estimator
2017-07-09	decomposedPSF	Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD)
2017-07-09	fcm	Inference of Fuzzy Cognitive Maps (FCMs)
2017-07-09	gmnl	Multinomial Logit Models with Random Parameters
2017-07-09	lpdensity	Local Polynomial Density Estimation and Inference
2017-07-09	mthapower	Sample Size and Post-Hoc Power of Association Studies Involving Mitochondrial DNA Haplogroups
2017-07-09	postlightmercury	Parses Web Pages using Postlight Mercury
2017-07-08	fcuk	The Ultimate Helper for Clumsy Fingers
2017-07-08	ggplotgui	Create Ggplots via a Graphical User Interface
2017-07-08	GofKmt	Khmaladze Martingale Transformation Goodness-of-Fit Test
2017-07-08	l1kdeconv	Deconvolution for LINCS L1000 Data
2017-07-08	mixlink	Mixture Link Regression
2017-07-08	ScottKnottESD	The Scott-Knott Effect Size Difference (ESD) Test
2017-07-08	survHE	Survival Analysis in Health Economic Evaluation
2017-07-08	USAboundaries	Historical and Contemporary Boundaries of the United States of America
2017-07-08	waccR	Cost of Capital by Sector Data
2017-07-07	aphid	Analysis with Profile Hidden Markov Models
2017-07-07	BNPMediation	Bayesian Nonparametric Method for Mediation
2017-07-07	BrailleR	Improved Access for Blind Users
2017-07-07	clustvarsel	Variable Selection for Gaussian Model-Based Clustering
2017-07-07	HBP	Hi-C BED File Analysis Pipeline
2017-07-07	imagine	IMAGing engINE, Tools for Application of Image Filters to Data Matrices
2017-07-07	IMIFA	Fitting, Diagnostics, and Plotting Functions for Infinite Mixtures of Infinite Factor Analysers and Related Models
2017-07-07	jcolors	Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2'
2017-07-07	LCMCR	Bayesian Non-Parametric Latent-Class Capture-Recapture
2017-07-07	partitions	Additive Partitions of Integers
2017-07-07	redlistr	Tools for the IUCN Red List of Ecosystems and Species
2017-07-07	SobolSequence	Sobol Sequences with Better Two-Dimensional Projections
2017-07-07	subniche	Within Outlying Mean Indexes: Refining the OMI Analysis
2017-07-07	textile	Textile Images
2017-07-07	tidygraph	A Tidy API for Graph Manipulation
2017-07-06	Autoplotprotein	Development of Visualization Tools for Protein Sequence
2017-07-06	correlbinom	Correlated Binomial Probabilities
2017-07-06	emdi	Estimating and Mapping Disaggregated Indicators
2017-07-06	emil	Evaluation of Modeling without Information Leakage
2017-07-06	ETAS	Modeling Earthquake Data Using ETAS Model
2017-07-06	ggChernoff	Chernoff Faces for 'ggplot2'
2017-07-06	grpreg	Regularization Paths for Regression Models with Grouped Covariates
2017-07-06	gSeg	Graph-Based Change-Point Detection (g-Segmentation)
2017-07-06	hyper2	The Hyperdirichlet Distribution, Mark 2
2017-07-06	itcSegment	Individual Tree Crowns Segmentation
2017-07-06	mandelbrot	Generates Views on the Mandelbrot Set
2017-07-06	nleqslv	Solve Systems of Nonlinear Equations
2017-07-06	oem	Orthogonalizing EM
2017-07-06	Robocoap	Generation of Dynamic Coappearance Matrices Within Texts
2017-07-06	statar	Tools Inspired by 'Stata' to Manipulate Tabular Data
2017-07-05	assocInd	Implements New and Existing Association Indices for Constructing Animal Social Networks
2017-07-05	awspack	Amazon Web Services Bundle Package
2017-07-05	bingat	Binary Graph Analysis Tools
2017-07-05	catSurv	Computerized Adaptive Testing for Survey Research
2017-07-05	coxphSGD	Stochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model
2017-07-05	HMPTrees	Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
2017-07-05	IRISSeismic	Classes and Methods for Seismic Data Analysis
2017-07-05	landscapeR	Categorical Landscape Simulation Facility
2017-07-05	midas	Turn HTML 'Shiny'
2017-07-05	moko	Multi-Objective Kriging Optimization
2017-07-05	numGen	Number Series Generator
2017-07-05	prodest	Production Function Estimation
2017-07-05	sitree	Single Tree Simulator
2017-07-05	SuperGauss	Superfast Likelihood Inference for Stationary Gaussian Time Series
2017-07-05	treeplyr	'dplyr' Functionality for Matched Tree and Data Objects
2017-07-04	apcluster	Affinity Propagation Clustering
2017-07-04	aws.cloudtrail	AWS CloudTrail Client Package
2017-07-04	aws.sns	AWS SNS Client Package
2017-07-04	aws.sqs	AWS SQS Client Package
2017-07-04	BayesBinMix	Bayesian Estimation of Mixtures of Multivariate Bernoulli Distributions
2017-07-04	cepR	Busca CEPs Brasileiros
2017-07-04	cleangeo	Cleaning Geometries from Spatial Objects
2017-07-04	cstab	Selection of Number of Clusters via Normalized Clustering Instability
2017-07-04	elhmc	Sampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo
2017-07-04	GameTheory	Cooperative Game Theory
2017-07-04	httpuv	HTTP and WebSocket Server Library
2017-07-04	knitcitations	Citations for 'Knitr' Markdown Files
2017-07-04	mcmcse	Monte Carlo Standard Errors for MCMC
2017-07-04	MDplot	Visualising Molecular Dynamics Analyses
2017-07-04	mrds	Mark-Recapture Distance Sampling
2017-07-04	nardl	Nonlinear Cointegrating Autoregressive Distributed Lag Model
2017-07-04	plotSEMM	Graphing Nonlinear Relations Among Latent Variables from Structural Equation Mixture Models
2017-07-04	prereg	R Markdown Templates to Preregister Scientific Studies
2017-07-04	rintrojs	Wrapper for the 'Intro.js' Library
2017-07-04	rococo	Robust Rank Correlation Coefficient and Test
2017-07-04	shinyjqui	'jQuery UI' Interactions and Effects for Shiny
2017-07-04	SSM	Fit and Analyze Smooth Supersaturated Models
2017-07-04	wql	Exploring Water Quality Monitoring Data
2017-07-03	adeba	Adaptive Density Estimation by Bayesian Averaging
2017-07-03	aurelius	Generates PFA Documents from R Code and Optionally Runs Them
2017-07-03	bcROCsurface	Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
2017-07-03	blockmodeling	An R Package for Generalized and Classical Blockmodeling of Valued Networks
2017-07-03	CovSelHigh	Model-Free Covariate Selection in High Dimensions
2017-07-03	Distance	Distance Sampling Detection Function and Abundance Estimation
2017-07-03	dsm	Density Surface Modelling of Distance Sampling Data
2017-07-03	DSsim	Distance Sampling Simulations
2017-07-03	ecolottery	Coalescent-Based Simulation of Ecological Communities
2017-07-03	emuR	Main Package of the EMU Speech Database Management System
2017-07-03	mnis	Easy Downloading Capabilities for the Members' Name Information Service
2017-07-03	myTAI	Evolutionary Transcriptomics Analyses
2017-07-03	oceanmap	A Plotting Toolbox for 2D Oceanographic Data
2017-07-03	PopGenome	An Efficient Swiss Army Knife for Population Genomic Analyses
2017-07-03	RcmdrPlugin.BiclustGUI	'Rcmdr' Plug-in GUI for Biclustering
2017-07-03	sos	Search Contributed R Packages, Sort by Package
2017-07-03	virtualspecies	Generation of Virtual Species Distributions
2017-07-03	wavemulcor	Wavelet Routines for Global and Local Multiple Correlation
2017-07-02	autoBagging	Learning to Rank Bagging Workflows with Metalearning
2017-07-02	aws.lambda	AWS Lambda Client Package
2017-07-02	gdns	Tools to Work with Google DNS Over HTTPS API
2017-07-02	geoSpectral	Classes and Methods for Working with Spectral Data with Space-Time Attributes
2017-07-02	hurdlr	Zero-Inflated and Hurdle Modelling Using Bayesian Inference
2017-07-02	kgschart	KGS Rank Graph Parser
2017-07-02	POUMM	The Phylogenetic Ornstein-Uhlenbeck Mixed Model
2017-07-02	quickregression	Quick Linear Regression
2017-07-02	rsoi	El Nino/Southern Oscillation (ENSO) and Related Climate Indices
2017-07-02	twang	Toolkit for Weighting and Analysis of Nonequivalent Groups
2017-07-01	aws.iam	AWS IAM Client Package
2017-07-01	aws.signature	Amazon Web Services Request Signatures
2017-07-01	bsam	Bayesian State-Space Models for Animal Movement
2017-07-01	chunked	Chunkwise Text-File Processing for 'dplyr'
2017-07-01	confidence	Confidence Estimation of Environmental State Classifications
2017-07-01	fence	Using Fence Methods for Model Selection
2017-07-01	hbdct	Hierarchical Bayesian Design for Clinical Trials
2017-07-01	Lock5Data	Datasets for "Statistics: UnLocking the Power of Data"
2017-07-01	MicroMacroMultilevel	Micro-Macro Multilevel Modeling
2017-07-01	SkyWatchr	Search and Download Satellite Imagery using the SkyWatch API
2017-06-30	aws.ec2metadata	Get EC2 Instance Metadata
2017-06-30	BiBitR	R Wrapper for Java Implementation of BiBit
2017-06-30	bibtex	Bibtex Parser
2017-06-30	funrar	Functional Rarity Indices Computation
2017-06-30	hhh4contacts	Age-Structured Spatio-Temporal Models for Infectious Disease Counts
2017-06-30	mcPAFit	Estimating Preferential Attachment from a Single Network Snapshot by Markov Chain Monte Carlo
2017-06-30	metaviz	Rainforest Plots and Visual Funnel Plot Inference for Meta-Analysis
2017-06-30	multimark	Capture-Mark-Recapture Analysis using Multiple Non-Invasive Marks
2017-06-30	OpasnetUtils	Opasnet Modelling Environment Utility Functions
2017-06-30	osmplotr	Bespoke Images of 'OpenStreetMap' Data
2017-06-30	PAFit	Generative Mechanism Estimation in Temporal Complex Networks
2017-06-30	rAmCharts	JavaScript Charts Tool
2017-06-30	riskRegression	Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks
2017-06-30	scpm	An R Package for Spatial Smoothing
2017-06-30	shazam	Immunoglobulin Somatic Hypermutation Analysis
2017-06-30	StratifiedRF	Builds Trees by Sampling Variables in Groups
2017-06-30	tm.plugin.lexisnexis	Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework
2017-06-29	BradleyTerryScalable	Fits the Bradley-Terry Model to Potentially Large and Sparse Networks of Comparison Data
2017-06-29	brglm	Bias Reduction in Binomial-Response Generalized Linear Models
2017-06-29	catmap	Case-Control and TDT Meta-Analysis Package
2017-06-29	CircMLE	Maximum Likelihood Analysis of Circular Data
2017-06-29	circular	Circular Statistics
2017-06-29	CondIndTests	Nonlinear Conditional Independence Tests
2017-06-29	eventstudies	Event Study Analysis
2017-06-29	GPareto	Gaussian Processes for Pareto Front Estimation and Optimization
2017-06-29	gsloid	Global Sea Level and Oxygen Isotope Data
2017-06-29	kazaam	Tools for Tall Distributed Matrices
2017-06-29	Luminescence	Comprehensive Luminescence Dating Data Analysis
2017-06-29	My.stepwise	Stepwise Variable Selection Procedures for Regression Analysis
2017-06-29	OTUtable	North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions
2017-06-29	PBSmapping	Mapping Fisheries Data and Spatial Analysis Tools
2017-06-29	pinnacle.data	Market Odds Data from Pinnacle
2017-06-29	treethresh	Methods for Tree-Based Local Adaptive Thresholding
2017-06-28	assertable	Verbose Assertions for Tabular Data (Data.frames and Data.tables)
2017-06-28	dotwhisker	Dot-and-Whisker Plots of Regression Results
2017-06-28	eeptools	Convenience Functions for Education Data
2017-06-28	EL2Surv	Empirical Likelihood (EL) for Comparing Two Survival Functions
2017-06-28	ExpRep	Experiment Repetitions
2017-06-28	ForecastFramework	A Basis for Modular Model Creation
2017-06-28	goldi	Gene Ontology Label Discernment and Identification
2017-06-28	ndjson	Wicked-Fast Streaming 'JSON' ('ndjson') Reader
2017-06-28	PoweR	Computation of Power and Level Tables for Hypothesis Tests
2017-06-28	ppcc	Probability Plot Correlation Coefficient Test
2017-06-28	psbcGroup	Penalized Parametric and Semiparametric Bayesian Survival Models with Shrinkage and Grouping Priors
2017-06-28	PSCBS	Analysis of Parent-Specific DNA Copy Numbers
2017-06-28	rkafka	Using Apache 'Kafka' Messaging Queue Through 'R'
2017-06-28	SFtools	Space Filling Based Tools for Data Mining
2017-06-28	sparsio	I/O Operations with Sparse Matrices
2017-06-28	sqldf	Manipulate R Data Frames Using SQL
2017-06-28	VNM	Finding Multiple-Objective Optimal Designs for the 4-Parameter Logistic Model
2017-06-27	BAT	Biodiversity Assessment Tools
2017-06-27	BRugs	Interface to the 'OpenBUGS' MCMC Software
2017-06-27	FSTpackage	Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores
2017-06-27	ghit	Lightweight GitHub Package Installer
2017-06-27	gmediation	Mediation Analysis for Multiple and Multi-Stage Mediators
2017-06-27	ICtest	Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction
2017-06-27	implyr	R Interface for Apache Impala
2017-06-27	JM	Joint Modeling of Longitudinal and Survival Data
2017-06-27	NCSampling	Nearest Centroid (NC) Sampling
2017-06-27	Opportunistic	Routing Distribution, Broadcasts, Transmissions and Receptions in an Opportunistic Network
2017-06-27	otrimle	Robust Model-Based Clustering
2017-06-27	pleio	Pleiotropy Test for Multiple Traits on a Genetic Marker
2017-06-27	rdiversity	Measurement and Partitioning of Similarity-Sensitive Biodiversity
2017-06-27	treeman	Phylogenetic Tree Manipulation Class and Methods
2017-06-26	BayesTwin	Bayesian Analysis of Item-Level Twin Data
2017-06-26	bigrquery	An Interface to Google's 'BigQuery' 'API'
2017-06-26	CRANsearcher	RStudio Addin for Searching Packages in CRAN Database Based on Keywords
2017-06-26	DepthProc	Statistical Depth Functions for Multivariate Analysis
2017-06-26	easyml	Easily Build and Evaluate Machine Learning Models
2017-06-26	helixvis	Visualize Alpha-Helical Peptide Sequences
2017-06-26	intRvals	Analysis of Time-Ordered Event Data with Missed Observations
2017-06-26	plater	Read, Tidy, and Display Data from Microtiter Plates
2017-06-26	pltesim	Simulate Probabilistic Long-Term Effects in Models with Temporal Dependence
2017-06-26	rattle.data	Rattle Datasets
2017-06-26	RLumShiny	'Shiny' Applications for the R Package 'Luminescence'
2017-06-26	sqlscore	Utilities for Generating SQL Queries from Model Objects
2017-06-26	twfy	Drive the API for TheyWorkForYou
2017-06-25	endorse	Bayesian Measurement Models for Analyzing Endorsement Experiments
2017-06-25	googleway	Accesses Google Maps APIs to Retrieve Data and Plot Maps
2017-06-25	leaflet.esri	'ESRI' Bindings for the 'leaflet' Package
2017-06-25	leaflet.extras	Extra Functionality for 'leaflet' Package
2017-06-25	net.security	Security Standards Data Sets
2017-06-25	tidygenomics	Tidy Verbs for Dealing with Genomic Data Frames
2017-06-25	TPEA	A Novel Topology-Based Pathway Enrichment Analysis Approach
2017-06-25	usdm	Uncertainty Analysis for Species Distribution Models
2017-06-24	aSPU	Adaptive Sum of Powered Score Test
2017-06-24	ddpcr	Analysis and Visualization of Droplet Digital PCR in R and on the Web
2017-06-24	DZEXPM	Estimation and Prediction of Skewed Spatial Processes
2017-06-24	evaluate	Parsing and Evaluation Tools that Provide More Details than the Default
2017-06-24	ggExtra	Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
2017-06-24	micompr	Multivariate Independent Comparison of Observations
2017-06-24	MultiSkew	Measures, Tests and Removes Multivariate Skewness
2017-06-24	RPostgreSQL	R Interface to the 'PostgreSQL' Database System
2017-06-24	stacomirtools	'ODBC' Connection Class for Package stacomiR
2017-06-23	BCgee	Bias-Corrected Estimates for Generalized Linear Models for Dependent Data
2017-06-23	corset	Arbitrary Bounding of Series and Time Series Objects
2017-06-23	fsia	Import and Analysis of OMR Data from FormScanner
2017-06-23	imputeTestbench	Test Bench for the Comparison of Imputation Methods
2017-06-23	JumpTest	Financial Jump Detection
2017-06-23	m2r	Macaulay2 in R
2017-06-23	mljar	R API for MLJAR
2017-06-23	nlsrk	Runge-Kutta Solver for Function nls()
2017-06-23	nmaINLA	Network Meta-Analysis using Integrated Nested Laplace Approximations
2017-06-23	nsROC	Non-Standard ROC Curve Analysis
2017-06-23	origami	Generalized Framework for Cross-Validation
2017-06-23	rem	Relational Event Models (REM)
2017-06-23	SCAT	Summary based Conditional Association Test
2017-06-23	spsann	Optimization of Sample Configurations using Spatial Simulated Annealing
2017-06-23	srvyr	'dplyr'-Like Syntax for Summary Statistics of Survey Data
2017-06-23	surv2sampleComp	Inference for Model-Free Between-Group Parameters for Censored Survival Data
2017-06-23	visreg	Visualization of Regression Models
2017-06-23	webutils	Utility Functions for Developing Web Applications
2017-06-23	WRTDStidal	Weighted Regression for Water Quality Evaluation in Tidal Waters
2017-06-22	IntegratedMRF	Integrated Prediction using Uni-Variate and Multivariate Random Forests
2017-06-22	metafor	Meta-Analysis Package for R
2017-06-22	MOQA	Basic Quality Data Assurance for Epidemiological Research
2017-06-22	nanotime	Nanosecond-Resolution Time for R
2017-06-22	rMouse	Automate Mouse Clicks and Send Keyboard Input
2017-06-22	rrcov3way	Robust Methods for Multiway Data Analysis, Applicable also for Compositional Data
2017-06-22	swapClass	A Null Model Adapted to Abundance Class Data in Ecology
2017-06-22	templates	A System for Working with Templates
2017-06-22	tseries	Time Series Analysis and Computational Finance
2017-06-21	CFC	Cause-Specific Framework for Competing-Risk Analysis
2017-06-21	foreign	Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
2017-06-21	ftDK	A Wrapper for the API of the Danish Parliament
2017-06-21	gk	g-and-k and g-and-h Distribution Functions
2017-06-21	hts	Hierarchical and Grouped Time Series
2017-06-21	LeArEst	Border and Area Estimation of Data Measured with Additive Error
2017-06-21	mpoly	Symbolic Computation and More with Multivariate Polynomials
2017-06-21	neotoma	Access to the Neotoma Paleoecological Database Through R
2017-06-21	rstream	Streams of Random Numbers
2017-06-21	sessioninfo	R Session Information
2017-06-20	anchoredDistr	Post-Processing for the Method of Anchored Distributions
2017-06-20	apaTables	Create American Psychological Association (APA) Style Tables
2017-06-20	congressbr	Downloads, Unpacks and Tidies Legislative Data from the Brazilian Federal Senate and Chamber of Deputies
2017-06-20	distillery	Method Functions for Confidence Intervals and to Distill Information from an Object
2017-06-20	mssqlR	MSSQL Querying using R
2017-06-20	nonmem2R	Loading NONMEM Output Files and Simulate with Parameter Uncertainty
2017-06-20	POMaSPU	Adaptive Association Tests for Multiple Phenotypes using Proportional Odds Model (POM-aSPU)
2017-06-20	qdapTools	Tools for the 'qdap' Package
2017-06-20	rcoreoa	Client for the CORE API
2017-06-20	RcppCCTZ	'Rcpp' Bindings for the 'CCTZ' Library
2017-06-20	rematch2	Tidy Output from Regular Expression Matching
2017-06-20	rkafkajars	External Jars Required for Package 'rkafka'
2017-06-20	RLeafAngle	Estimates, Plots and Evaluates Leaf Angle Distribution Functions, Calculates Extinction Coefficients
2017-06-20	rpostgisLT	Managing Animal Movement Data with 'PostGIS' and R
2017-06-20	scape	Statistical Catch-at-Age Plotting Environment
2017-06-20	taxizedb	Tools for Working with 'Taxonomic' Databases
2017-06-20	tukeytrend	Tukeys Trend Test via Multiple Marginal Models
2017-06-20	ukbabynames	UK Baby Names Data
2017-06-20	WeightedCluster	Clustering of Weighted Data
2017-06-19	AICcmodavg	Model Selection and Multimodel Inference Based on (Q)AIC(c)
2017-06-19	clinPK	Clinical Pharmacokinetics Toolkit
2017-06-19	fuzzyjoin	Join Tables Together on Inexact Matching
2017-06-19	gutenbergr	Download and Process Public Domain Works from Project Gutenberg
2017-06-19	MAVE	Methods for Dimension Reduction
2017-06-19	namedCapture	Named Capture Regular Expressions
2017-06-19	PCovR	Principal Covariates Regression
2017-06-19	PeakError	Compute the Annotation Error of Peak Calls
2017-06-19	qte	Quantile Treatment Effects
2017-06-19	Rdroolsjars	Rdrools JARs
2017-06-19	ReinforcementLearning	Model-Free Reinforcement Learning
2017-06-19	RSQLite	'SQLite' Interface for R
2017-06-19	sciplot	Scientific Graphing Functions for Factorial Designs
2017-06-19	sfadv	Advanced Methods for Stochastic Frontier Analysis
2017-06-19	unvotes	United Nations General Assembly Voting Data
2017-06-19	XML	Tools for Parsing and Generating XML Within R and S-Plus
2017-06-18	DBI	R Database Interface
2017-06-18	forecastSNSTS	Forecasting for Stationary and Non-Stationary Time Series
2017-06-18	mvSLOUCH	Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2017-06-18	processmonitR	Building Process Monitoring Dashboards
2017-06-18	rio	A Swiss-Army Knife for Data I/O
2017-06-18	statmod	Statistical Modeling
2017-06-18	worms	Retriving Aphia Information from World Register of Marine Species
2017-06-17	bindrcpp	An 'Rcpp' Interface to Active Bindings
2017-06-17	blob	A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
2017-06-17	ECFsup	Equal Covariance Functions Testing by L2-Norm and Sup-Norm
2017-06-17	MFPCA	Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains
2017-06-17	R6	Classes with Reference Semantics
2017-06-17	RSQLServer	SQL Server R Database Interface (DBI) and 'dplyr' SQL Backend
2017-06-17	secret	Share Sensitive Information in R Packages
2017-06-17	snowFT	Fault Tolerant Simple Network of Workstations
2017-06-17	tableone	Create 'Table 1' to Describe Baseline Characteristics
2017-06-17	xpose4	Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
2017-06-16	charlatan	Make Fake Data
2017-06-16	CityWaterBalance	Track Flows of Water Through an Urban System
2017-06-16	crandatapkgs	Find Data-Only Packages on CRAN
2017-06-16	eiCompare	Compares EI, Goodman, RxC Estimates
2017-06-16	MARX	Simulation, Estimation and Selection of MARX Models
2017-06-16	phenopix	Process Digital Images of a Vegetation Cover
2017-06-16	pipe.design	Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design
2017-06-16	qrmtools	Tools for Quantitative Risk Management
2017-06-15	assignPOP	Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
2017-06-15	baseballDBR	Sabermetrics and Advanced Baseball Statistics
2017-06-15	dataverse	Client for Dataverse 4 Repositories
2017-06-15	dma	Dynamic Model Averaging
2017-06-15	GeoRange	Calculating Geographic Range from Occurrence Data
2017-06-15	LendingClub	A Lending Club API Wrapper
2017-06-15	mccr	The Matthews Correlation Coefficient
2017-06-15	MultiABEL	Multi-Trait Genome-Wide Association Analysis
2017-06-15	nneo	'NEON' 'API' Client
2017-06-15	overlapping	Estimation of Overlapping in Empirical Distributions
2017-06-15	pleiades	Interface to the 'Pleiades' 'Archeological' Database
2017-06-15	SuperExactTest	Exact Test and Visualization of Multi-Set Intersections
2017-06-15	TANDEM	A Two-Stage Approach to Maximize Interpretability of Drug Response Models Based on Multiple Molecular Data Types
2017-06-15	tractor.base	Read, Manipulate and Visualise Magnetic Resonance Images
2017-06-15	zooaRchGUI	Interactive Analytical Tools for Zooarchaeological Data
2017-06-14	analytics	Regression Outlier Detection, Stationary Bootstrap, Testing Weak Stationarity, and Other Tools for Data Analysis
2017-06-14	astrochron	A Computational Tool for Astrochronology
2017-06-14	aws.s3	AWS S3 Client Package
2017-06-14	base64url	Fast and URL-Safe Base64 Encoder and Decoder
2017-06-14	censusr	Collect Data from the Census API
2017-06-14	flacco	Feature-Based Landscape Analysis of Continuous and Constrained Optimization Problems
2017-06-14	gmm	Generalized Method of Moments and Generalized Empirical Likelihood
2017-06-14	nauf	Regression with NA Values in Unordered Factors
2017-06-14	nscprepr	Prepares and Writes Files to Submit to the National Student Clearinghouse
2017-06-14	phantom	Gene Set Pareto Heterogeneity Analysis of Time-Course Gene Expression Data
2017-06-14	phylogram	Dendrograms for Evolutionary Analysis
2017-06-14	redR	REgularization by Denoising (RED)
2017-06-14	rspa	Adapt Numerical Records to Fit (in)Equality Restrictions
2017-06-14	satscanMapper	'SaTScan' (TM) Results Mapper
2017-06-14	shinydashboard	Create Dashboards with 'Shiny'
2017-06-14	vqtl	Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses
2017-06-14	ZIBseq	Differential Abundance Analysis for Metagenomic Data via Zero-Inflated Beta Regression
2017-06-13	cmna	Computational Methods for Numerical Analysis
2017-06-13	ConR	Computation of Parameters Used in Preliminary Assessment of Conservation Status
2017-06-13	d3Tree	Create Interactive Collapsible Trees with the JavaScript 'D3' Library
2017-06-13	detzrcr	Compare Detrital Zircon Suites
2017-06-13	gamesGA	Genetic Algorithm for Sequential Symmetric Games
2017-06-13	imputeTS	Time Series Missing Value Imputation
2017-06-13	meshsimp	Simplification of Surface Triangular Meshes with Associated Distributed Data
2017-06-13	MfUSampler	Multivariate-from-Univariate (MfU) MCMC Sampler
2017-06-13	muRL	Mailmerge using R, LaTeX, and the Web
2017-06-13	tropr	TV Tropes Statistics
2017-06-13	UNF	Tools for Creating Universal Numeric Fingerprints for Data
2017-06-12	argon2	Secure Password Hashing
2017-06-12	ClusterBootstrap	Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap
2017-06-12	FAmle	Maximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
2017-06-12	fastICA	FastICA Algorithms to Perform ICA and Projection Pursuit
2017-06-12	letsR	Tools for Data Handling and Analysis in Macroecology
2017-06-12	mix	Estimation/Multiple Imputation for Mixed Categorical and Continuous Data
2017-06-12	patternator	Feature Extraction from Female Brown Anole Lizard Dorsal Patterns
2017-06-12	pinnacle.API	A Wrapper for the Pinnacle API
2017-06-12	polyapost	Simulating from the Polya Posterior
2017-06-12	pspline	Penalized Smoothing Splines
2017-06-12	qtl	Tools for Analyzing QTL Experiments
2017-06-12	qualV	Qualitative Validation Methods
2017-06-12	rcdd	Computational Geometry
2017-06-12	rrBLUP	Ridge Regression and Other Kernels for Genomic Selection
2017-06-12	SanFranBeachWater	Downloads and Tidies the San Francisco Public Utilities Commission Beach Water Quality Monitoring Program Data
2017-06-12	standardize	Tools for Standardizing Variables for Regression in R
2017-06-12	tmcn	A Text Mining Toolkit for Chinese
2017-06-11	featurizer	Some Helper Functions that Help Create Features from Data
2017-06-11	likeLTD	Tools to Evaluate DNA Profile Evidence
2017-06-11	orderstats	Efficiently Generates Random Order Statistic Variables
2017-06-11	pse	Parameter Space Exploration with Latin Hypercubes
2017-06-11	rcdklibs	The CDK Libraries Packaged for R
2017-06-10	cld2	Google's Compact Language Detector 2
2017-06-10	colorpatch	Optimized Rendering of Fold Changes and Confidence Values
2017-06-10	funData	An S4 Class for Functional Data
2017-06-10	GIGrvg	Random Variate Generator for the GIG Distribution
2017-06-10	GPGame	Solving Complex Game Problems using Gaussian Processes
2017-06-10	janeaustenr	Jane Austen's Complete Novels
2017-06-10	lavaanPlot	Path Diagrams for Lavaan Models via DiagrammeR
2017-06-10	pROC	Display and Analyze ROC Curves
2017-06-10	RNetLogo	Provides an Interface to the Agent-Based Modelling Platform 'NetLogo'
2017-06-10	soptdmaeA	Sequential Optimal Designs for Two-Colour cDNA Microarray Experiments
2017-06-09	permPATH	Permutation Based Gene Expression Pathway Analysis
2017-06-09	plfm	Probabilistic Latent Feature Analysis
2017-06-08	DLASSO	Implementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models
2017-06-08	frequencies	Create Frequency Tables with Counts and Rates
2017-06-08	gapfill	Fill Missing Values in Satellite Data
2017-06-08	getmstatistic	Quantifying Systematic Heterogeneity in Meta-Analysis
2017-06-08	kzfs	Multi-Scale Motions Separation with Kolmogorov-Zurbenko Periodogram Signals
2017-06-08	listWithDefaults	List with Defaults
2017-06-08	mapproj	Map Projections
2017-06-08	maps	Draw Geographical Maps
2017-06-08	milr	Multiple-Instance Logistic Regression with LASSO Penalty
2017-06-08	mixEMM	A Mixed-Effects Model for Analyzing Cluster-Level Non-Ignorable Missing Data
2017-06-08	msmtools	Building Augmented Data to Run Multi-State Models with 'msm' Package
2017-06-08	mvMORPH	Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
2017-06-08	Risk	Computes 26 Financial Risk Measures for Any Continuous Distribution
2017-06-08	robustBLME	Robust Bayesian Linear Mixed-Effects Models using ABC
2017-06-08	RSmartlyIO	Loading Facebook and Instagram Advertising Data from 'Smartly.io'
2017-06-08	sfsmisc	Utilities from 'Seminar fuer Statistik' ETH Zurich
2017-06-08	sidier	Substitution and Indel Distances to Infer Evolutionary Relationships
2017-06-08	Tinflex	A Universal Non-Uniform Random Number Generator
2017-06-08	xsp	The Chi-Square Periodogram
2017-06-07	clampSeg	Idealisation of Patch Clamp Recordings
2017-06-07	cld3	Google's Compact Language Detector 3
2017-06-07	gqlr	'GraphQL' Server in R
2017-06-07	hapsim	Haplotype Data Simulation
2017-06-07	HiCglmi	Probing Factor-Dependent Long-Range Contacts using Regression with Higher-Order Interaction Terms
2017-06-07	influence.ME	Tools for Detecting Influential Data in Mixed Effects Models
2017-06-07	iNOTE	Integrative Network Omnibus Total Effect Test
2017-06-07	kernplus	A Kernel Regression-Based Multidimensional Wind Turbine Power Curve
2017-06-07	SPEI	Calculation of the Standardised Precipitation-Evapotranspiration Index
2017-06-07	useful	A Collection of Handy, Useful Functions
2017-06-07	vortexR	Post Vortex Simulation Analysis
2017-06-07	ZeligChoice	Zelig Choice Models
2017-06-07	ZeligEI	Zelig Ecological Inference Models
2017-06-06	assertr	Assertive Programming for R Analysis Pipelines
2017-06-06	BAYESDEF	Bayesian Analysis of DSD
2017-06-06	BayesNetBP	Bayesian Network Belief Propagation
2017-06-06	bdlp	Transparent and Reproducible Artificial Data Generation
2017-06-06	covfefe	Covfefy Any Word, Sentence or Speech
2017-06-06	cquad	Conditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
2017-06-06	electionsBR	R Functions to Download and Clean Brazilian Electoral Data
2017-06-06	fields	Tools for Spatial Data
2017-06-06	gamlssbssn	Bimodal Skew Symmetric Normal Distribution
2017-06-06	gdata	Various R Programming Tools for Data Manipulation
2017-06-06	geoknife	Web-Processing of Large Gridded Datasets
2017-06-06	gghalfnorm	Create a Half Normal Plot Using 'ggplot2'
2017-06-06	gquad	Prediction of G Quadruplexes and Other Non-B DNA Motifs
2017-06-06	gridGraphics	Redraw Base Graphics Using 'grid' Graphics
2017-06-06	HDCI	High Dimensional Confidence Interval Based on Lasso and Bootstrap
2017-06-06	iadf	Analysis of Intra Annual Density Fluctuations
2017-06-06	lintools	Manipulation of Linear Systems of (in)Equalities
2017-06-06	mopa	Species Distribution MOdeling with Pseudo-Absences
2017-06-06	MultiLCIRT	Multidimensional Latent Class Item Response Theory Models
2017-06-06	nlstimedist	Non-Linear Model Fitting of Time Distribution of Biological Phenomena
2017-06-06	nomclust	Hierarchical Nominal Clustering Package
2017-06-06	piton	Parsing Expression Grammars in Rcpp
2017-06-06	PrevMap	Geostatistical Modelling of Spatially Referenced Prevalence Data
2017-06-06	pwrAB	Power Analysis for AB Testing
2017-06-06	randomNames	Function for Generating Random Names and a Dataset
2017-06-06	RISmed	Download Content from NCBI Databases
2017-06-06	rpst	Recursive Partitioning Survival Trees
2017-06-06	themetagenomics	Exploring Thematic Structure and Predicted Functionality of 16s rRNA Amplicon Data
2017-06-06	zetadiv	Functions to Compute Compositional Turnover Using Zeta Diversity
2017-06-06	zstdr	R Bindings to the 'Zstandard' Compression Library
2017-06-05	anytime	Anything to 'POSIXct' or 'Date' Converter
2017-06-05	capn	Capital Asset Pricing for Nature
2017-06-05	fastnet	Large-Scale Social Network Analysis
2017-06-05	imaginator	Simulate General Insurance Policies and Losses
2017-06-05	minval	MINimal VALidation for Stoichiometric Reactions
2017-06-05	netassoc	Inference of Species Associations from Co-Occurrence Data
2017-06-05	Peptides	Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences
2017-06-05	pvclass	P-Values for Classification
2017-06-05	Rgbp	Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data
2017-06-04	edgar	Platform for EDGAR Filing Management
2017-06-03	ck37r	Chris Kennedy's R Toolkit
2017-06-03	colordistance	Distance Metrics for Image Color Similarity
2017-06-03	eesim	Simulate and Evaluate Time Series for Environmental Epidemiology
2017-06-03	glmertree	Generalized Linear Mixed Model Trees
2017-06-03	KRMM	Kernel Ridge Mixed Model
2017-06-03	NB.MClust	Negative Binomial Model-Based Clustering
2017-06-03	smcfcs	Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification
2017-06-03	vistime	Pretty Timeline Creation
2017-06-02	CADFtest	A Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests
2017-06-02	deductive	Data Correction and Imputation Using Deductive Methods
2017-06-02	divest	Get Images Out of DICOM Format Quickly
2017-06-02	ECctmc	Simulation from Endpoint-Conditioned Continuous Time Markov Chains
2017-06-02	glmbb	All Hierarchical or Graphical Models for Generalized Linear Model
2017-06-02	hypersampleplan	Attribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials
2017-06-02	KarsTS	An Interface for Karstic Time Series
2017-06-02	logOfGamma	Natural Logarithms of the Gamma Function for Large Values
2017-06-02	nearfar	Near-Far Matching
2017-06-02	PHENIX	Phenotypic Integration Index
2017-06-02	planor	Generation of Regular Factorial Designs
2017-06-02	ratelimitr	Rate Limiting for R
2017-06-02	rpms	Recursive Partitioning for Modeling Survey Data
2017-06-02	spdplyr	Data Manipulation Verbs for the Spatial Classes
2017-06-02	webglobe	3D Interactive Globes
2017-06-01	CARBayes	Spatial Generalised Linear Mixed Models for Areal Unit Data
2017-06-01	EpiModel	Mathematical Modeling of Infectious Disease
2017-06-01	jsonlite	A Robust, High Performance JSON Parser and Generator for R
2017-06-01	kerasR	R Interface to the Keras Deep Learning Library
2017-06-01	libstableR	Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions
2017-06-01	popsom	Functions for Constructing and Evaluating Self-Organizing Maps
2017-06-01	QPBoot	Model Validation using Quantile Spectral Analysis and Parametric Bootstrap
2017-06-01	qtlcharts	Interactive Graphics for QTL Experiments
2017-06-01	rentrez	Entrez in R
2017-06-01	SCRT	Single-Case Randomization Tests
2017-06-01	SCVA	Single-Case Visual Analysis
2017-06-01	Tmisc	Turner Miscellaneous
2017-05-31	baitmet	Library Driven Compound Profiling in Gas Chromatography - Mass Spectrometry Data
2017-05-31	bamdit	Bayesian Meta-Analysis of Diagnostic Test Data
2017-05-31	btf	Estimates Univariate Function via Bayesian Trend Filtering
2017-05-31	difconet	Differential Coexpressed Networks
2017-05-31	ElastH	Replicar metodologia de SPE/MF para calculo de elasticidade de receita
2017-05-31	FDboost	Boosting Functional Regression Models
2017-05-31	genpathmox	Generalized Pathmox Approach Segmentation Tree Analysis
2017-05-31	ids	Generate Random Identifiers
2017-05-31	ImaginR	Delimit and Characterize Color Phenotype of the Pearl Oyster
2017-05-31	kernDeepStackNet	Kernel Deep Stacking Networks
2017-05-31	logistic4p	Logistic Regression with Misclassification in Dependent Variables
2017-05-31	pencopulaCond	Estimating Non-Simplified Vine Copulas Using Penalized Splines
2017-05-31	rangeBuilder	Occurrence Filtering, Geographic and Taxonomic Standardization and Generation of Species Range Polygons
2017-05-30	cocoreg	Extract Shared Variation in Collections of Data Sets Using Regression Models
2017-05-30	CpGassoc	Association Between Methylation and a Phenotype of Interest
2017-05-30	dtangle	Cell Type Deconvolution from Gene Expressions
2017-05-30	forestFloor	Visualizes Random Forests with Feature Contributions
2017-05-30	HIBPwned	Bindings for the 'HaveIBeenPwned.com' Data Breach API
2017-05-30	loder	Dependency-Free Access to PNG Image Files
2017-05-30	mdpeer	Graph-Constrained Regression with Enhanced Regularization Parameters Selection
2017-05-30	quadprogXT	Quadratic Programming with Absolute Value Constraints
2017-05-30	SIDES	Subgroup Identification Based on Differential Effect Search
2017-05-30	sisVIVE	Some Invalid Some Valid Instrumental Variables Estimator
2017-05-30	VarReg	Semi-Parametric Variance Regression
2017-05-29	classiFunc	Classification of Functional Data
2017-05-29	clustrd	Methods for Joint Dimension Reduction and Clustering
2017-05-29	CodeDepends	Analysis of R Code for Reproducible Research and Code Comprehension
2017-05-29	DDM	Death Registration Coverage Estimation
2017-05-29	dfCompare	Compare Two Dataframes and Return Adds, Changes, and Deletes
2017-05-29	lcmm	Extended Mixed Models Using Latent Classes and Latent Processes
2017-05-29	multivator	A Multivariate Emulator
2017-05-29	MVR	Mean-Variance Regularization
2017-05-29	phenex	Auxiliary Functions for Phenological Data Analysis
2017-05-29	phrasemachine	Simple Phrase Extraction
2017-05-29	powerCompRisk	Power Analysis Tool for Joint Testing Hazards with Competing Risks Data
2017-05-29	RGoogleFit	R Interface to Google Fit API
2017-05-29	rLTP	R Interface to the 'LTP'-Cloud Service
2017-05-29	robumeta	Robust Variance Meta-Regression
2017-05-29	shiny.semantic	Semantic UI Support for Shiny
2017-05-29	sodavis	SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models
2017-05-29	squash	Color-Based Plots for Multivariate Visualization
2017-05-28	BEST	Bayesian Estimation Supersedes the t-Test
2017-05-28	Boom	Bayesian Object Oriented Modeling
2017-05-28	BoomSpikeSlab	MCMC for Spike and Slab Regression
2017-05-28	bsts	Bayesian Structural Time Series
2017-05-28	dataonderivatives	Easily Source Publicly Available Data on Derivatives
2017-05-28	here	A Simpler Way to Find Your Files
2017-05-28	SmartSVA	Fast and Robust Surrogate Variable Analysis
2017-05-28	SocialMediaLab	Tools for Collecting Social Media Data and Generating Networks for Analysis
2017-05-27	didrooRFM	Compute Recency Frequency Monetary Scores for your Customer Data
2017-05-27	MIICD	Multiple Imputation for Interval Censored Data
2017-05-27	overlap	Estimates of Coefficient of Overlapping for Animal Activity Patterns
2017-05-27	polypoly	Helper Functions for Orthogonal Polynomials
2017-05-27	SeerMapper	A Quick Way to Map U.S. Rates and Data of U. S. States, Counties, Census Tracts, or Seer Registries using 2000 and 2010 U. S. Census Boundaries
2017-05-27	stratvns	Optimal Stratification in Stratified Sampling Optimization Algorithm
2017-05-27	tablaxlsx	Write Formatted Tables in Excel Workbooks
2017-05-27	timedelay	Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars
2017-05-27	tsoutliers	Detection of Outliers in Time Series
2017-05-26	CharFun	Numerical Computation Cumulative Distribution Function and Probability Density Function from Characteristic Function
2017-05-26	epanetReader	Read Epanet Files into R
2017-05-26	fpp2	Data for "Forecasting: Principles and Practice" (2nd Edition)
2017-05-26	icRSF	A Modified Random Survival Forest Algorithm
2017-05-26	InterVA4	Replicate and Analyse 'InterVA4'
2017-05-26	knotR	Knot Diagrams using Bezier Curves
2017-05-26	ldbod	Local Density-Based Outlier Detection
2017-05-26	stratbr	Optimal Stratification in Stratified Sampling
2017-05-26	tictactoe	Tic-Tac-Toe Game
2017-05-25	amen	Additive and Multiplicative Effects Models for Networks and Relational Data
2017-05-25	apng	Convert Png Files into Animated Png
2017-05-25	biotools	Tools for Biometry and Applied Statistics in Agricultural Science
2017-05-25	eechidna	Exploring Election and Census Highly Informative Data Nationally for Australia
2017-05-25	Mediana	Clinical Trial Simulations
2017-05-25	RAMP	Regularized Generalized Linear Models with Interaction Effects
2017-05-25	rdoxygen	Create Doxygen Documentation for Source Code
2017-05-25	Rfacebook	Access to Facebook API via R
2017-05-25	soilphysics	Soil Physical Analysis
2017-05-25	spray	Sparse Arrays and Multivariate Polynomials
2017-05-25	timelineR	Visualization for Time Series Data
2017-05-25	TriadSim	Simulating Triad Genomewide Genotypes
2017-05-24	ARTP2	Pathway and Gene-Level Association Test
2017-05-24	lans2r	Work with Look at NanoSIMS Data in R
2017-05-24	sparseMVN	Multivariate Normal Functions for Sparse Covariance and Precision Matrices
2017-05-24	wally	The Wally Calibration Plot for Risk Prediction Models
2017-05-24	x.ent	eXtraction of ENTity
2017-05-23	BacArena	Modeling Framework for Cellular Communities in their Environments
2017-05-23	distances	Tools for Distance Metrics
2017-05-23	FLLat	Fused Lasso Latent Feature Model
2017-05-23	IRISMustangMetrics	Statistics and Metrics for Seismic Data
2017-05-23	LatticeKrig	Multiresolution Kriging Based on Markov Random Fields
2017-05-23	multisom	Clustering a Data Set using Multi-SOM Algorithm
2017-05-23	RHPCBenchmark	Benchmarks for High-Performance Computing Environments
2017-05-23	RNAstructureModuleMiner	RNA Secondary Structure Comparison and Module Mining
2017-05-23	ROI.models.miplib	R Optimization Infrastructure: 'MIPLIB' 2010 Benchmark Instances
2017-05-23	rpatrec	Recognising Visual Charting Patterns in Time Series Data
2017-05-23	samplingbook	Survey Sampling Procedures
2017-05-23	SubVis	Visual Exploration of Protein Alignments Resulting from Multiple Substitution Matrices
2017-05-23	voxel	Mass-Univariate Voxelwise Analysis of Medical Imaging Data
2017-05-23	xLLiM	High Dimensional Locally-Linear Mapping
2017-05-22	carpenter	Build Common Tables of Summary Statistics for Reports
2017-05-22	DendroSync	A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies
2017-05-22	multicmp	Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution
2017-05-22	Rd2md	Markdown Reference Manuals
2017-05-22	readtext	Import and Handling for Plain and Formatted Text Files
2017-05-22	scclust	Size-Constrained Clustering
2017-05-22	sotu	United States Presidential State of the Union Addresses
2017-05-22	testit	A Simple Package for Testing R Packages
2017-05-21	clisymbols	Unicode Symbols at the R Prompt
2017-05-21	DynTxRegime	Methods for Estimating Optimal Dynamic Treatment Regimes
2017-05-21	edfReader	Reading EDF(+) and BDF(+) Files
2017-05-21	GlobalOptions	Generate Functions to Get or Set Global Options
2017-05-21	IgorR	Read Binary Files Saved by 'Igor Pro' (Including 'Neuromatic' Data)
2017-05-21	NPMOD	Non Parametric Module
2017-05-21	penRvine	Flexible R-Vines Estimation Using Bivariate Penalized Splines
2017-05-21	plfMA	A GUI to View, Design and Export Various Graphs of Data
2017-05-21	RANN	Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric
2017-05-21	rngWELL	Toolbox for WELL Random Number Generators
2017-05-21	timereg	Flexible Regression Models for Survival Data
2017-05-20	dendroextras	Extra Functions to Cut, Label and Colour Dendrogram Clusters
2017-05-20	gfmR	Implements Group Fused Multinomial Regression
2017-05-20	mousetrap	Process and Analyze Mouse-Tracking Data
2017-05-20	quickmatch	Quick Generalized Full Matching
2017-05-20	schumaker	Schumaker Shape-Preserving Spline
2017-05-20	webmockr	Stubbing and Setting Expectations on 'HTTP' Requests
2017-05-19	AHMbook	Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology'
2017-05-19	bgeva	Binary Generalized Extreme Value Additive Models
2017-05-19	CALF	Coarse Approximation Linear Function
2017-05-19	CATT	The Cochran-Armitage Trend Test
2017-05-19	checkarg	Check the Basic Validity of a (Function) Argument
2017-05-19	covRobust	Robust Covariance Estimation via Nearest Neighbor Cleaning
2017-05-19	ipdw	Spatial Interpolation by Inverse Path Distance Weighting
2017-05-19	kdevine	Multivariate Kernel Density Estimation with Vine Copulas
2017-05-19	MIIVsem	Model Implied Instrumental Variable (MIIV) Estimation of Structural Equation Models
2017-05-19	nabor	Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions
2017-05-19	numKM	Create a Kaplan-Meier Plot with Numbers at Risk
2017-05-19	poisbinom	A Faster Implementation of the Poisson-Binomial Distribution
2017-05-19	printr	Automatically Print R Objects to Appropriate Formats According to the 'knitr' Output Format
2017-05-19	reportReg	An Easy Way to Report Regression Analysis
2017-05-19	simputation	Simple Imputation
2017-05-19	stepR	Multiscale Change-Point Inference
2017-05-18	afc	Generalized Discrimination Score
2017-05-18	AR	Another Look at the Acceptance-Rejection Method
2017-05-18	complexplus	Functions of Complex or Real Variable
2017-05-18	designmatch	Matched Samples that are Balanced and Representative by Design
2017-05-18	dplR	Dendrochronology Program Library in R
2017-05-18	flexrsurv	Flexible Relative Survival Analysis
2017-05-18	GESE	Gene-Based Segregation Test
2017-05-18	GSED	Group Sequential Enrichment Design
2017-05-18	GUIgems	Graphical User Interface for Generalized Multistate Simulation Model
2017-05-18	mixKernel	Omics Data Integration Using Kernel Methods
2017-05-18	numOSL	Numeric Routines for Optically Stimulated Luminescence Dating
2017-05-18	powerplus	Exponentiation Operations
2017-05-18	REDCapR	Interaction Between R and REDCap
2017-05-18	Rglpk	R/GNU Linear Programming Kit Interface
2017-05-18	rmdformats	HTML Output Formats and Templates for 'rmarkdown' Documents
2017-05-18	SSRMST	Sample Size Calculation using Restricted Mean Survival Time
2017-05-18	uncmbb	UNC Men's Basketball Match Results Since 1949-1950 Season
2017-05-18	wCorr	Weighted Correlations
2017-05-17	easyNCDF	Tools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays
2017-05-17	ROI.plugin.ipop	ROI Plug-in {ipop}
2017-05-17	ROI.plugin.quadprog	ROI Plug-in {quadprog}
2017-05-17	ROI.plugin.symphony	ROI Plug-in SYMPHONY
2017-05-17	SemiParSampleSel	Semi-Parametric Sample Selection Modelling with Continuous or Discrete Response
2017-05-17	zeligverse	Easily Install and Load Stable Zelig Packages
2017-05-16	distcomp	Computations over Distributed Data without Aggregation
2017-05-16	dtwSat	Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis
2017-05-16	ExcessMass	Excess Mass Calculation and Plots
2017-05-16	FatTailsR	Kiener Distributions and Fat Tails in Finance
2017-05-16	fmsb	Functions for Medical Statistics Book with some Demographic Data
2017-05-16	geoparser	Interface to the Geoparser.io API for Identifying and Disambiguating Places Mentioned in Text
2017-05-16	monkeylearn	Accesses the Monkeylearn API for Text Classifiers and Extractors
2017-05-16	MultiPhen	A Package to Test for Pleiotropic Effects
2017-05-16	PROscorer	Functions to Score Commonly-Used Patient-Reported Outcome (PRO) Measures and Other Psychometric Instruments
2017-05-16	readr	Read Rectangular Text Data
2017-05-16	rif	Client for 'Neuroscience' Information Framework 'APIs'
2017-05-16	ROpenDota	Access OpenDota Services in R
2017-05-16	rqPen	Penalized Quantile Regression
2017-05-16	rticles	Article Formats for R Markdown
2017-05-16	sotkanet	Sotkanet Open Data Access and Analysis
2017-05-15	coreSim	Core Functionality for Simulating Quantities of Interest from Generalised Linear Models
2017-05-15	desctable	Produce Descriptive and Comparative Tables Easily
2017-05-15	fourierin	Computes Numeric Fourier Integrals
2017-05-15	HURDAT	Hurricane Re-Analysis Project
2017-05-15	issueReporter	Create Reports from GitHub Issues
2017-05-15	PairwiseD	Pairing Up Units and Vectors in Panel Data Setting
2017-05-15	PROscorerTools	Tools to Score Patient-Reported Outcome (PRO) and Other Psychometric Measures
2017-05-15	RBPcurve	The Residual-Based Predictiveness Curve
2017-05-15	redux	R Bindings to 'hiredis'
2017-05-15	rrepast	Invoke 'Repast Simphony' Simulation Models
2017-05-15	simPH	Tools for Simulating and Plotting Quantities of Interest Estimated from Cox Proportional Hazards Models
2017-05-15	slim	Singular Linear Models for Longitudinal Data
2017-05-15	unmarked	Models for Data from Unmarked Animals
2017-05-14	anim.plots	Simple Animated Plots for R
2017-05-14	gomms	GLM-Based Ordination Method
2017-05-14	GSIF	Global Soil Information Facilities
2017-05-14	IPEC	Root Mean Square Curvature Calculation
2017-05-14	missDeaths	Simulating and Analyzing Time to Event Data in the Presence of Population Mortality
2017-05-14	neurohcp	Human Connectome Project Interface
2017-05-14	pacman	Package Management Tool
2017-05-14	plotKML	Visualization of Spatial and Spatio-Temporal Objects in Google Earth
2017-05-14	QZ	Generalized Eigenvalues and QZ Decomposition
2017-05-13	GEEmediate	Mediation Analysis for Generalized Linear Models Using the Difference Method
2017-05-13	inflection	Finds the Inflection Point of a Curve
2017-05-13	learnrbook	Datasets for Aphalo's "Learn R" Book
2017-05-13	mbgraphic	Measure Based Graphic Selection
2017-05-13	purrrlyr	Tools at the Intersection of 'purrr' and 'dplyr'
2017-05-13	sudokuAlt	Tools for Making and Spoiling Sudoku Games
2017-05-12	BMA	Bayesian Model Averaging
2017-05-12	diffMeshGP	Multi-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
2017-05-12	EpistemicGameTheory	Constructing an Epistemic Model for the Games with Two Players
2017-05-12	fastTextR	An Interface to the 'fastText' Library
2017-05-12	freqweights	Working with Frequency Tables
2017-05-12	globe	Plot 2D and 3D Views of the Earth, Including Major Coastline
2017-05-12	iGSEA	Integrative Gene Set Enrichment Analysis Approaches
2017-05-12	jocre	Joint Confidence Regions
2017-05-12	lifelogr	Life Logging
2017-05-12	modelObj	A Model Object Framework for Regression Analysis
2017-05-12	PP	Person Parameter Estimation
2017-05-12	rdist	Calculate Pairwise Distances
2017-05-12	rel	Reliability Coefficients
2017-05-12	rerddap	General Purpose Client for 'ERDDAP' Servers
2017-05-12	rivernet	Read, Analyze and Plot River Networks
2017-05-12	shinycssloaders	Add CSS Loading Animations to 'shiny' Outputs
2017-05-12	sinib	Sum of Independent Non-Identical Binomial Random Variables
2017-05-12	usedist	Distance Matrix Utilities
2017-05-11	arulesSequences	Mining Frequent Sequences
2017-05-11	BGData	A Suite of Packages for Analysis of Big Genomic Data
2017-05-11	cba	Clustering for Business Analytics
2017-05-11	EMP	Expected Maximum Profit Classification Performance Measure
2017-05-11	iECAT	Integrating External Controls into Association Test
2017-05-11	lhmixr	Fit Sex-Specific Life History Models with Missing Classifications
2017-05-11	pawls	Penalized Adaptive Weighted Least Squares Regression
2017-05-11	RGCCA	Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data
2017-05-11	smacof	Multidimensional Scaling
2017-05-11	TransModel	Fit Linear Transformation Models for Right Censored Data
2017-05-11	WebGestaltR	The R Version of WebGestalt
2017-05-10	bnnSurvival	Bagged k-Nearest Neighbors Survival Prediction
2017-05-10	CADStat	Provides a GUI to Several Statistical Methods
2017-05-10	daff	Diff, Patch and Merge for Data.frames
2017-05-10	gastempt	Analyzing Gastric Emptying from MRI or Scintigraphy
2017-05-10	hoardr	Manage Cached Files
2017-05-10	lindia	Automated Linear Regression Diagnostic
2017-05-10	lmmot	Multiple Ordinal Tobit (MOT) Model
2017-05-10	lsasim	Functions to Facilitate the Simulation of Large Scale Assessment Data
2017-05-10	manifestoR	Access and Process Data and Documents of the Manifesto Project
2017-05-10	Meiosis	Simulation of Meiosis in Plant Breeding Research
2017-05-10	nephro	Utilities for Nephrology
2017-05-10	optband	'surv' Object Confidence Bands Optimized by Area
2017-05-10	outbreaks	A Collection of Disease Outbreak Data
2017-05-10	qrsvm	SVM Quantile Regression with the Pinball Loss
2017-05-10	RGtk2	R Bindings for Gtk 2.8.0 and Above
2017-05-10	RootsExtremaInflections	Finds Roots, Extrema and Inflection Points of a Curve
2017-05-10	TSdbi	Time Series Database Interface
2017-05-10	TSsql	Generic SQL Helper Functions for 'TSdbi' SQL Plugins
2017-05-10	varhandle	Functions for Robust Variable Handling
2017-05-09	AcuityView	A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity
2017-05-09	bmixture	Bayesian Estimation for Finite Mixture of Distributions
2017-05-09	comf	Functions for Thermal Comfort Research
2017-05-09	DIFlasso	A Penalty Approach to Differential Item Functioning in Rasch Models
2017-05-09	plotprotein	Development of Visualization Tools for Protein Sequence
2017-05-09	rtide	Tide Heights
2017-05-09	seriation	Infrastructure for Ordering Objects Using Seriation
2017-05-09	sourceR	Fits a Non-Parametric Bayesian Source Attribution Model
2017-05-09	SSDM	Stacked Species Distribution Modelling
2017-05-09	TestFunctions	Test Functions for Simulation Experiments and Evaluating Optimization and Emulation Algorithms
2017-05-09	yhatr	R Binder for the Yhat API
2017-05-08	bit64	A S3 Class for Vectors of 64bit Integers
2017-05-08	clustMD	Model Based Clustering for Mixed Data
2017-05-08	datasauRus	Datasets from the Datasaurus Dozen
2017-05-08	eemR	Tools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data
2017-05-08	EMMIXskew	The EM Algorithm and Skew Mixture Distribution
2017-05-08	IndianTaxCalc	Indian Income Tax Calculator
2017-05-08	largeVis	High-Quality Visualizations of Large, High-Dimensional Datasets
2017-05-08	MaxSkew	Orthogonal Data Projections with Maximal Skewness
2017-05-08	philentropy	Similarity and Distance Quantification Between Probability Functions
2017-05-08	RPEXE.RPEXT	Reduced Piecewise Exponential Estimate/Test Software
2017-05-08	saeSim	Simulation Tools for Small Area Estimation
2017-05-08	symDMatrix	Partitioned Symmetric Matrices
2017-05-07	ACEt	Estimating Dynamic Heritability and Twin Model Comparison
2017-05-07	aoos	Another Object Orientation System
2017-05-07	beanz	Bayesian Analysis of Heterogeneous Treatment Effect
2017-05-07	BEDMatrix	Extract Genotypes from a PLINK .bed File
2017-05-07	biclique	Maximal Biclique Enumeration in Bipartite Graphs
2017-05-07	bife	Binary Choice Models with Fixed Effects
2017-05-07	chi	The Chi Distribution
2017-05-07	corrgram	Plot a Correlogram
2017-05-07	googlesheets	Manage Google Spreadsheets from R
2017-05-07	icesSAG	Stock Assessment Graphs Database Web Services
2017-05-07	invgamma	The Inverse Gamma Distribution
2017-05-06	efreadr	Read European Eddy Fluxes CSV Files
2017-05-06	glmmLasso	Variable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
2017-05-06	PROreg	Patient Reported Outcomes Regression Analysis
2017-05-06	pwr2	Power and Sample Size Analysis for One-way and Two-way ANOVA Models
2017-05-06	rnoaa	'NOAA' Weather Data from R
2017-05-06	VarfromPDB	Disease-Gene-Variant Relations Mining from the Public Databases and Literature
2017-05-05	BHMSMAfMRI	Bayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data
2017-05-05	capm	Companion Animal Population Management
2017-05-05	cifti	Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files
2017-05-05	codingMatrices	Alternative Factor Coding Matrices for Linear Model Formulae
2017-05-05	cowbell	Performs Segmented Linear Regression on Two Independent Variables
2017-05-05	crunchy	Shiny Apps on Crunch
2017-05-05	EMMIXcontrasts2	Contrasts in Mixed Effects for EMMIX Model with Random Effects 2
2017-05-05	expint	Exponential Integral and Incomplete Gamma Function
2017-05-05	gamboostLSS	Boosting Methods for 'GAMLSS'
2017-05-05	logbin	Relative Risk Regression Using the Log-Binomial Model
2017-05-05	OneR	One Rule Machine Learning Classification Algorithm with Enhancements
2017-05-05	portes	Portmanteau Tests for Univariate and Multivariate Time Series Models
2017-05-05	readstata13	Import 'Stata' Data Files
2017-05-05	RInside	C++ Classes to Embed R in C++ Applications
2017-05-05	RODBC	ODBC Database Access
2017-05-05	seqminer	Efficiently Read Sequence Data (VCF Format, BCF Format and METAL Format) into R
2017-05-04	biglasso	Extending Lasso Model Fitting to Big Data
2017-05-04	compHclust	Complementary Hierarchical Clustering
2017-05-04	ContourFunctions	Create Contour Plots from Data or a Function
2017-05-04	DataGraph	Export Data from R so DataGraph can Read it
2017-05-04	dimRed	A Framework for Dimensionality Reduction
2017-05-04	EdSurvey	Education Survey
2017-05-04	idar	Individual Diversity-Area Relationships
2017-05-04	LDcorSV	Linkage Disequilibrium Corrected by the Structure and the Relatedness
2017-05-04	PBD	Protracted Birth-Death Model of Diversification
2017-05-04	REAT	Regional Economic Analysis Toolbox
2017-05-04	seasonalview	Graphical User Interface for Seasonal Adjustment
2017-05-04	TideHarmonics	Harmonic Analysis of Tides
2017-05-04	x13binary	Provide the 'x13ashtml' Seasonal Adjustment Binary
2017-05-03	COMPoissonReg	Conway-Maxwell Poisson (COM-Poisson) Regression
2017-05-03	Corbi	Collection of Rudimentary Bioinformatics Tools
2017-05-03	CorReg	Linear Regression Based on Linear Structure Between Variables
2017-05-03	crmPack	Object-Oriented Implementation of CRM Designs
2017-05-03	datetime	Nominal Dates, Times, and Durations
2017-05-03	glmmML	Generalized Linear Models with Clustering
2017-05-03	kmcudaR	'Yinyang' K-Means and K-NN using NVIDIA CUDA
2017-05-03	m2b	Movement to Behaviour Inference using Random Forest
2017-05-03	matrixpls	Matrix-Based Partial Least Squares Estimation
2017-05-03	pegas	Population and Evolutionary Genetics Analysis System
2017-05-03	proportion	Inference on Single Binomial Proportion and Bayesian Computations
2017-05-03	qrmix	Quantile Regression Mixture Models
2017-05-03	TcGSA	Time-Course Gene Set Analysis
2017-05-02	discord	Functions for Discordant Kinship Modeling
2017-05-02	dsrTest	Tests and Confidence Intervals on Directly Standardized Rates for Several Methods
2017-05-02	FunChisq	Chi-Square and Exact Tests for Non-Parametric Functional Dependencies
2017-05-02	gamlss.inf	Fitting Mixed (Inflated and Adjusted) Distributions
2017-05-02	KSEAapp	Kinase-Substrate Enrichment Analysis
2017-05-02	mut	Pairwise Likelihood Ratios
2017-05-02	ncdump	Extract Metadata from 'NetCDF' Files as Data Frames
2017-05-02	onehot	Fast Onehot Encoding for Data.frames
2017-05-02	QoLR	Analysis of Health-Related Quality of Life in Oncology
2017-05-02	seasonal	R Interface to X-13-ARIMA-SEATS
2017-05-01	anacor	Simple and Canonical Correspondence Analysis
2017-05-01	angstroms	Tools for 'ROMS' the Regional Ocean Modeling System
2017-05-01	cfa	Configural Frequency Analysis (CFA)
2017-05-01	dhglm	Double Hierarchical Generalized Linear Models
2017-05-01	doMPI	Foreach Parallel Adaptor for the Rmpi Package
2017-05-01	EML	Read and Write Ecological Metadata Language Files
2017-05-01	excel.link	Convenient Data Exchange with Microsoft Excel
2017-05-01	fftw	Fast FFT and DCT Based on the FFTW Library
2017-05-01	fuzzr	Fuzz-Test R Functions
2017-05-01	ibr	Iterative Bias Reduction
2017-05-01	MHTmult	Multiple Hypotheses Testing for Multiple Families/Groups Structure
2017-05-01	MultivariateRandomForest	Models Multivariate Cases Using Random Forests
2017-05-01	nlsem	Fitting Structural Equation Mixture Models
2017-05-01	roll	Rolling Statistics
2017-05-01	virustotal	R Client for the VirusTotal API
2017-05-01	WRS2	A Collection of Robust Statistical Methods
2017-04-30	aws.alexa	Client for the Amazon Alexa Web Information Services API
2017-04-30	ClueR	Cluster Evaluation
2017-04-30	cubfits	Codon Usage Bias Fits
2017-04-30	DDRTree	Learning Principal Graphs with DDRTree
2017-04-30	DstarM	Analyze Two Choice Reaction Time Data with the D*M Method
2017-04-30	MetaboList	Annotation of Metabolites from Liquid Chromatography-Mass Spectrometry Data
2017-04-30	pafdR	Book Companion for Processing and Analyzing Financial Data with R
2017-04-30	rootWishart	Distribution of Largest Root for Single and Double Wishart Settings
2017-04-30	SPADAR	Spherical Projections of Astronomical Data
2017-04-29	antiword	Extract Text from Microsoft Word Documents
2017-04-29	ChocoLattes	Processing Data from Lattes CV Files
2017-04-29	dataseries	Switzerland's Data Series in One Place
2017-04-29	GADMTools	Easy Use of 'GADM' Shapefiles
2017-04-29	MixSim	Simulating Data to Study Performance of Clustering Algorithms
2017-04-29	mlxR	Simulation of Longitudinal Data
2017-04-29	mockr	Mocking in R
2017-04-29	parfm	Parametric Frailty Models
2017-04-29	pim	Fit Probabilistic Index Models
2017-04-29	radiant	Business Analytics using R and Shiny
2017-04-29	radiant.multivariate	Multivariate Menu for Radiant: Business Analytics using R and Shiny
2017-04-28	aRxiv	Interface to the arXiv API
2017-04-28	casebase	Fitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression
2017-04-28	ConsRank	Compute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
2017-04-28	cts	Continuous Time Autoregressive Models
2017-04-28	fetchR	Calculate Wind Fetch
2017-04-28	flexmix	Flexible Mixture Modeling
2017-04-28	gcmr	Gaussian Copula Marginal Regression
2017-04-28	gsrsb	Group Sequential Refined Secondary Boundary
2017-04-28	homomorpheR	Homomorphic Computations in R
2017-04-28	htmltools	Tools for HTML
2017-04-28	orsk	Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
2017-04-28	PerMallows	Permutations and Mallows Distributions
2017-04-28	permDep	Permutation Tests for General Dependent Truncation
2017-04-28	radiant.model	Model Menu for Radiant: Business Analytics using R and Shiny
2017-04-28	roahd	Robust Analysis of High Dimensional Data
2017-04-28	SIBER	Stable Isotope Bayesian Ellipses in R
2017-04-28	TSdist	Distance Measures for Time Series Data
2017-04-28	waterData	Retrieval, Analysis, and Anomaly Calculation of Daily Hydrologic Time Series Data
2017-04-28	WikidataQueryServiceR	API Client Library for 'Wikidata Query Service'
2017-04-27	AdhereR	Adherence to Medications
2017-04-27	aSPC	An Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors
2017-04-27	bujar	Buckley-James Regression for Survival Data with High-Dimensional Covariates
2017-04-27	genie	A New, Fast, and Outlier Resistant Hierarchical Clustering Algorithm
2017-04-27	immer	Item Response Models for Multiple Ratings
2017-04-27	lm.br	Linear Model with Breakpoint
2017-04-27	msos	Data Sets and Functions Used in Multivariate Statistics: Old School by John Marden
2017-04-27	mstherm	Analyze MS/MS Protein Melting Data
2017-04-27	multfisher	Optimal Exact Tests for Multiple Binary Endpoints
2017-04-27	ncvreg	Regularization Paths for SCAD and MCP Penalized Regression Models
2017-04-27	NlcOptim	Solve Nonlinear Optimization with Nonlinear Constraints
2017-04-27	NonpModelCheck	Model Checking and Variable Selection in Nonparametric Regression
2017-04-27	radiant.basics	Basics Menu for Radiant: Business Analytics using R and Shiny
2017-04-27	radiant.design	Design Menu for Radiant: Business Analytics using R and Shiny
2017-04-27	robust	Port of the S+ "Robust Library"
2017-04-27	robustreg	Robust Regression Functions
2017-04-27	visualize	Graph Probability Distributions with User Supplied Parameters and Statistics
2017-04-26	bulletr	Algorithms for Matching Bullet Lands
2017-04-26	cIRT	Choice Item Response Theory
2017-04-26	coxphMIC	Sparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion
2017-04-26	dina	Bayesian Estimation of DINA Model
2017-04-26	fourPNO	Bayesian 4 Parameter Item Response Model
2017-04-26	htree	Historical Tree Ensembles for Longitudinal Data
2017-04-26	IBDsim	Simulation of Chromosomal Regions Shared by Family Members
2017-04-26	madness	Automatic Differentiation of Multivariate Operations
2017-04-26	md.log	Produces Markdown Log File with a Built-in Function Call
2017-04-26	plink	IRT Separate Calibration Linking Methods
2017-04-26	rebird	R Client for the eBird Database of Bird Observations
2017-04-26	RSCABS	Rao-Scott Cochran-Armitage by Slices Trend Test
2017-04-26	rv	Simulation-Based Random Variable Objects
2017-04-26	splithalf	Calculate Task Split Half Reliability Estimates
2017-04-25	binomen	'Taxonomic' Specification and Parsing Methods
2017-04-25	censCov	Linear Regression with a Randomly Censored Covariate
2017-04-25	clinfun	Clinical Trial Design and Data Analysis Functions
2017-04-25	demography	Forecasting Mortality, Fertility, Migration and Population Data
2017-04-25	formatR	Format R Code Automatically
2017-04-25	ftsa	Functional Time Series Analysis
2017-04-25	gam	Generalized Additive Models
2017-04-25	gitlabr	Access to the Gitlab API
2017-04-25	lfl	Linguistic Fuzzy Logic
2017-04-25	partialCI	Partial Cointegration
2017-04-25	radiant.data	Data Menu for Radiant: Business Analytics using R and Shiny
2017-04-25	RandMeta	Efficient Numerical Algorithm for Exact Inference in Meta Analysis
2017-04-25	RcppTOML	'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
2017-04-25	rebus	Build Regular Expressions in a Human Readable Way
2017-04-25	rebus.base	Core Functionality for the 'rebus' Package
2017-04-25	simest	Constrained Single Index Model Estimation
2017-04-25	subspaceMOA	Interface to 'subspaceMOA'
2017-04-25	V8	Embedded JavaScript Engine for R
2017-04-25	zip	Cross-Platform 'zip' Compression
2017-04-24	ajv	Another JSON Schema Validator
2017-04-24	BarBorGradient	Function Minimum Approximator
2017-04-24	ider	Various Methods for Estimating Intrinsic Dimension
2017-04-24	imager	Image Processing Library Based on 'CImg'
2017-04-24	lamW	Lambert-W Function
2017-04-24	nonpar	A Collection of Nonparametric Hypothesis Tests
2017-04-24	PGEE	Penalized Generalized Estimating Equations in High-Dimension
2017-04-24	phylotate	Phylogenies with Annotations
2017-04-24	ring	Circular / Ring Buffers
2017-04-24	selectapref	Analysis of Field and Laboratory Foraging
2017-04-24	sem	Structural Equation Models
2017-04-23	distrEx	Extensions of Package 'distr'
2017-04-23	MonteCarlo	Automatic Parallelized Monte Carlo Simulations
2017-04-23	npROCRegression	Kernel-Based Nonparametric ROC Regression Modelling
2017-04-23	plspm	Tools for Partial Least Squares Path Modeling (PLS-PM)
2017-04-23	PSF	Forecasting of Univariate Time Series Using the Pattern Sequence-Based Forecasting (PSF) Algorithm
2017-04-23	RandVar	Implementation of Random Variables
2017-04-23	RobAStBase	Robust Asymptotic Statistics
2017-04-23	ROptEst	Optimally Robust Estimation
2017-04-23	SparseM	Sparse Linear Algebra
2017-04-23	startupmsg	Utilities for Start-Up Messages
2017-04-22	climextRemes	Tools for Analyzing Climate Extremes
2017-04-22	deldir	Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
2017-04-22	distr	Object Oriented Implementation of Distributions
2017-04-22	nat.templatebrains	NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains
2017-04-22	rdlocrand	Local Randomization Methods for RD Designs
2017-04-22	readBrukerFlexData	Reads Mass Spectrometry Data in Bruker *flex Format
2017-04-22	scatterplot3d	3D Scatter Plot
2017-04-22	startR	Automatically Retrieve Multidimensional Distributed Data Sets
2017-04-22	support.BWS	Basic Functions for Supporting an Implementation of Best-Worst Scaling
2017-04-22	SweaveListingUtils	Utilities for Sweave Together with TeX 'listings' Package
2017-04-22	treatSens	Sensitivity Analysis for Causal Inference
2017-04-21	chemmodlab	A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models
2017-04-21	crawl	Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data
2017-04-21	CrossScreening	Cross-Screening in Observational Studies that Test Many Hypotheses
2017-04-21	DMRMark	DMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data
2017-04-21	dtplyr	Data Table Back-End for 'dplyr'
2017-04-21	installr	Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio', 'Git', and More!)
2017-04-21	KENDL	Kernel-Smoothed Nonparametric Methods for Environmental Exposure Data Subject to Detection Limits
2017-04-21	memoise	Memoisation of Functions
2017-04-21	Morpho	Calculations and Visualisations Related to Geometric Morphometrics
2017-04-21	phylobase	Base Package for Phylogenetic Structures and Comparative Data
2017-04-21	PRROC	Precision-Recall and ROC Curves for Weighted and Unweighted Data
2017-04-21	ratesci	Confidence Intervals for Comparisons of Binomial or Poisson Rates
2017-04-21	regress	Gaussian Linear Models with Linear Covariance Structure
2017-04-21	Rgb	The R Genome Browser
2017-04-21	RpeakChrom	Tools for Chromatographic Column Characterization and Modelling Chromatographic Peak
2017-04-21	SADISA	Species Abundance Distributions with Independent-Species Assumption
2017-04-21	SGP	Student Growth Percentiles & Percentile Growth Trajectories
2017-04-21	simMP	Simulate Somatic Mutations in Cancer Genomes from Mutational Processes
2017-04-21	sinaplot	An Enhanced Chart for Simple and Truthful Representation of Single Observations over Multiple Classes
2017-04-21	SIS	Sure Independence Screening
2017-04-21	spocc	Interface to Species Occurrence Data Sources
2017-04-21	statGraph	Statistical Methods for Graphs
2017-04-21	synbreed	Framework for the Analysis of Genomic Prediction Data using R
2017-04-21	unix	Unix System Utilities
2017-04-20	abctools	Tools for ABC Analyses
2017-04-20	BIOdry	Multilevel Modeling of Dendroclimatical Fluctuations
2017-04-20	gistr	Work with 'GitHub' 'Gists'
2017-04-20	LINselect	Selection of Linear Estimators
2017-04-20	LOST	Missing Morphometric Data Simulation and Estimation
2017-04-20	markdown	'Markdown' Rendering for R
2017-04-20	PortfolioOptim	Small/Large Sample Portfolio Optimization
2017-04-20	prcbench	Testing Workbench for Precision-Recall Curves
2017-04-20	prozor	Minimal Protein Set Explaining Peptide Spectrum Matches
2017-04-20	RCALI	Calculation of the Integrated Flow of Particles Between Polygons
2017-04-20	rpart.plot	Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
2017-04-20	validann	Validation Tools for Artificial Neural Networks
2017-04-20	WufooR	R Wrapper for the 'Wufoo.com' - The Form Building Service
2017-04-19	datacheckr	Data Checking
2017-04-19	DynNom	Dynamic Nomograms for Linear, Generalized Linear and Proportional Hazard Models
2017-04-19	GGMselect	Gaussian Graphs Models Selection
2017-04-19	paleomorph	Geometric Morphometric Tools for Paleobiology
2017-04-19	PCADSC	Tools for Principal Component Analysis-Based Data Structure Comparisons
2017-04-19	prediction	Tidy, Type-Safe 'prediction()' Methods
2017-04-19	rAltmetric	Retrieves Altmerics Data for Any Published Paper from 'Altmetric.com'
2017-04-19	rfishbase	R Interface to 'FishBase'
2017-04-19	ss3sim	Fisheries Stock Assessment Simulation Testing with Stock Synthesis
2017-04-19	yarrr	A Companion to the e-Book "YaRrr!: The Pirate's Guide to R"
2017-04-18	acnr	Annotated Copy-Number Regions
2017-04-18	cna	Causal Modeling with Coincidence Analysis
2017-04-18	icosa	Global Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra
2017-04-18	lfactors	Factors with Levels
2017-04-18	longCatEDA	Package for Plotting Categorical Longitudinal and Time-Series Data
2017-04-18	partialAR	Partial Autoregression
2017-04-18	QICD	Estimate the Coefficients for Non-Convex Penalized Quantile Regression Model by using QICD Algorithm
2017-04-18	readxl	Read Excel Files
2017-04-18	Rpoppler	PDF Tools Based on Poppler
2017-04-18	SGCS	Spatial Graph Based Clustering Summaries for Spatial Point Patterns
2017-04-18	spatialsegregation	Segregation Measures for Multitype Spatial Point Patterns
2017-04-18	TSGSIS	Two Stage-Grouped Sure Independence Screening
2017-04-18	uqr	Unconditional Quantile Regression
2017-04-18	WLreg	Regression Analysis Based on Win Loss Endpoints
2017-04-17	convey	Income Concentration Analysis with Complex Survey Samples
2017-04-17	icamix	Estimation of ICA Mixture Models
2017-04-17	ifaTools	Toolkit for Item Factor Analysis with 'OpenMx'
2017-04-17	largeList	Serialization Interface for Large List Objects
2017-04-17	RandomFields	Simulation and Analysis of Random Fields
2017-04-16	choroplethr	Simplify the Creation of Choropleth Maps in R
2017-04-16	classInt	Choose Univariate Class Intervals
2017-04-16	curvHDR	Filtering of Flow Cytometry Samples
2017-04-16	forestmodel	Forest Plots from Regression Models
2017-04-16	idm	Incremental Decomposition Methods
2017-04-16	mcmc	Markov Chain Monte Carlo
2017-04-16	mro	Multiple Correlation
2017-04-16	rotationForest	Fit and Deploy Rotation Forest Models
2017-04-16	rpivotTable	Build Powerful Pivot Tables and Dynamically Slice & Dice your Data
2017-04-16	splancs	Spatial and Space-Time Point Pattern Analysis
2017-04-16	XGR	Exploring Genomic Relations for Enhanced Interpretation Through Enrichment, Similarity, Network and Annotation Analysis
2017-04-15	captr	Client for the Captricity API
2017-04-15	complexity	Calculate the Proportion of Permutations in Line with an Informative Hypothesis
2017-04-15	ConvergenceConcepts	Seeing Convergence Concepts in Action
2017-04-15	MST	Multivariate Survival Trees
2017-04-15	qtbase	Interface Between R and Qt
2017-04-15	tseriesEntropy	Entropy Based Analysis and Tests for Time Series
2017-04-14	babynames	US Baby Names 1880-2015
2017-04-14	bamlss	Bayesian Additive Models for Location Scale and Shape (and Beyond)
2017-04-14	bayesCL	Bayesian Inference on a GPU using OpenCL
2017-04-14	matrixStats	Functions that Apply to Rows and Columns of Matrices (and to Vectors)
2017-04-14	nortestARMA	Neyman Smooth Tests of Normality for the Errors of ARMA Models
2017-04-14	RandomFieldsUtils	Utilities for the Simulation and Analysis of Random Fields
2017-04-14	Rtsne	T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
2017-04-14	scidb	An R Interface to SciDB
2017-04-14	SeerMapper2010East	Supplemental U. S. 2010 Census Tract Boundaries for 23 Eastern States without Registries for 'SeerMapper'
2017-04-14	SeerMapper2010West	Supplemental U.S. 2010 Census Tract Boundaries for 14 Western States without Seer Registries for 'SeerMapper'
2017-04-14	StatPerMeCo	Statistical Performance Measures to Evaluate Covariance Matrix Estimates
2017-04-14	thankr	Find Out Who Maintains the Packages you Use
2017-04-13	DAISIE	Dynamical Assembly of Islands by Speciation, Immigration and Extinction
2017-04-13	fitbitScraper	Scrapes Data from Fitbit
2017-04-13	fpest	Estimating Finite Population Total
2017-04-13	GDINA	The Generalized DINA Model Framework
2017-04-13	horserule	Flexible Non-Linear Regression with the HorseRule Algorithm
2017-04-13	influence.SEM	Case Influence in Structural Equation Models
2017-04-13	jug	A Simple Web Framework for R
2017-04-13	nopaco	Non-Parametric Concordance Coefficient
2017-04-13	ore	An R Interface to the Onigmo Regular Expression Library
2017-04-13	R2ucare	Goodness-of-Fit Tests for Capture-Recapture Models
2017-04-13	rags2ridges	Ridge Estimation of Precision Matrices from High-Dimensional Data
2017-04-13	SeerMapper2010Regs	Supplemental U. S. 2010 Census Tract Boundaries for 15 States with Seer Registries for 'SeerMapper'
2017-04-13	SGPdata	Exemplar Data Sets for SGP Analyses
2017-04-13	spec	A Data Specification Format and Interface
2017-04-13	StructFDR	False Discovery Control Procedure Integrating the Prior Structure Information
2017-04-13	Tnseq	Identification of Conditionally Essential Genes in Transposon Sequencing Studies
2017-04-13	tubern	R Client for the YouTube Analytics and Reporting API
2017-04-13	wrangle	A Systematic Data Wrangling Idiom
2017-04-12	abbyyR	Access to Abbyy Optical Character Recognition (OCR) API
2017-04-12	ANOM	Analysis of Means
2017-04-12	clarifai	Access to Clarifai API
2017-04-12	CompQuadForm	Distribution Function of Quadratic Forms in Normal Variables
2017-04-12	fullfact	Full Factorial Breeding Analysis
2017-04-12	lgcp	Log-Gaussian Cox Process
2017-04-12	marcher	Migration and Range Change Estimation in R
2017-04-12	optrcdmaeAT	Optimal Row-Column Designs for Two-Colour cDNA Microarray Experiments
2017-04-12	OSMscale	Add a Scale Bar to 'OpenStreetMap' Plots
2017-04-12	r.jive	Perform JIVE Decomposition for Multi-Source Data
2017-04-12	rbhl	Interface to the 'Biodiversity' 'Heritage' Library
2017-04-12	rpdo	Pacific Decadal Oscillation Index Data
2017-04-12	SeerMapperEast	Supplemental U. S. 2000 Census Tract Boundaries for 23 Eastern States without Seer Registries
2017-04-12	SeerMapperWest	Supplemental U.S. 2000 Census Tract Boundaries for 14 Western States without Seer Registries for 'SeerMapper'
2017-04-12	stddiff	Calculate the Standardized Difference for Numeric, Binary and Category Variables
2017-04-11	AcousticNDLCodeR	Coding Sound Files for Use with NDL
2017-04-11	assertthat	Easy Pre and Post Assertions
2017-04-11	easyDes	An Easy Way to Descriptive Analysis
2017-04-11	fastqcr	Quality Control of Sequencing Data
2017-04-11	GADAG	A Genetic Algorithm for Learning Directed Acyclic Graphs
2017-04-11	GLIDE	Global and Individual Tests for Direct Effects
2017-04-11	jsonld	JSON for Linking Data
2017-04-11	mapr	Visualize Species Occurrence Data
2017-04-11	RPANDA	Phylogenetic ANalyses of DiversificAtion
2017-04-11	strataG	Summaries and Population Structure Analyses of Genetic Data
2017-04-11	VIM	Visualization and Imputation of Missing Values
2017-04-10	brainGraph	Graph Theory Analysis of Brain MRI Data
2017-04-10	BUCSS	Bias and Uncertainty Corrected Sample Size
2017-04-10	D3GB	Interactive Genome Browser with R
2017-04-10	doRNG	Generic Reproducible Parallel Backend for 'foreach' Loops
2017-04-10	lspline	Linear Splines with Convenient Parametrisations
2017-04-10	partools	Tools for the 'Parallel' Package
2017-04-10	rbison	Interface to the 'USGS' 'BISON' 'API'
2017-04-10	SeerMapperRegs	Supplemental U. S. 2000 Census Tract Boundary for 15 States with Seer Registries for 'SeerMapper'
2017-04-10	tlm	Effects under Linear, Logistic and Poisson Regression Models with Transformed Variables
2017-04-10	tuneR	Analysis of Music and Speech
2017-04-09	eLNNpaired	Model-Based Gene Clustering for Genomics Data from Paired/Matched Designs
2017-04-09	expands	Expanding Ploidy and Allele-Frequency on Nested Subpopulations
2017-04-09	Grace	Graph-Constrained Estimation and Hypothesis Tests
2017-04-09	gridsample	Tools for Grid-Based Survey Sampling Design
2017-04-09	mRchmadness	Numerical Tools for Filling Out an NCAA Basketball Tournament Bracket
2017-04-09	qdapRegex	Regular Expression Removal, Extraction, and Replacement Tools
2017-04-09	shinyFeedback	Displays User Feedback Next to Shiny Inputs
2017-04-09	simpleRCache	Simple R Cache
2017-04-09	skeletor	An R Package Skeleton Generator
2017-04-09	tpAUC	Estimation and Inference of Two-Way pAUC, pAUC and pODC
2017-04-08	directlabels	Direct Labels for Multicolor Plots
2017-04-07	beyondWhittle	Bayesian Spectral Inference for Stationary Time Series
2017-04-07	duckduckr	Simple Client for the DuckDuckGo Instant Answer API
2017-04-07	filehash	Simple Key-Value Database
2017-04-07	IMTest	Information Matrix Test for Generalized Partial Credit Models
2017-04-07	IRTShiny	Item Response Theory via Shiny
2017-04-07	lavaan.shiny	Latent Variable Analysis with Shiny
2017-04-07	MedDietCalc	Multi Calculator to Compute Scores of Adherence to Mediterranean Diet
2017-04-07	micEconIndex	Price and Quantity Indices
2017-04-07	psychomix	Psychometric Mixture Models
2017-04-07	reghelper	Helper Functions for Regression Analysis
2017-04-07	repr	Serializable Representations
2017-04-07	rosm	Plot Raster Map Tiles from Open Street Map and Other Sources
2017-04-07	secure	Sequential Co-Sparse Factor Regression
2017-04-07	sylcount	Syllable Counting and Readability Measurements
2017-04-07	TLMoments	Calculate TL-Moments and Convert Them to Distribution Parameters
2017-04-06	c212	Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes)
2017-04-06	cffdrs	Canadian Forest Fire Danger Rating System
2017-04-06	classifierplots	Generates a Visualization of Classifier Performance as a Grid of Diagnostic Plots
2017-04-06	CoFRA	Complete Functional Regulation Analysis
2017-04-06	CPBayes	Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations
2017-04-06	eshrink	Shrinkage for Effect Estimation
2017-04-06	fit.models	Compare Fitted Models
2017-04-06	ggedit	Interactive 'ggplot2' Layer and Theme Aesthetic Editor
2017-04-06	mmod	Modern Measures of Population Differentiation
2017-04-06	zfa	Zoom-Focus Algorithm
2017-04-05	bigstep	Stepwise Selection for Large Data Sets
2017-04-05	demogR	Analysis of Age-Structured Demographic Models
2017-04-05	diversitree	Comparative 'Phylogenetic' Analyses of Diversification
2017-04-05	heavy	Robust Estimation Using Heavy-Tailed Distributions
2017-04-05	jetset	One-to-One Gene-Probeset Mapping for Affymetrix Human Microarrays
2017-04-05	recommenderlab	Lab for Developing and Testing Recommender Algorithms
2017-04-05	sourcetools	Tools for Reading, Tokenizing and Parsing R Code
2017-04-05	stablespec	Stable Specification Search in Structural Equation Models
2017-04-05	TSPred	Functions for Benchmarking Time Series Prediction
2017-04-04	CircularDDM	Circular Drift-Diffusion Model
2017-04-04	ctmcmove	Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
2017-04-04	diveRsity	A Comprehensive, General Purpose Population Genetics Analysis Package
2017-04-04	HYRISK	Hybrid Methods for Addressing Uncertainty in RISK Assessments
2017-04-04	koRpus	An R Package for Text Analysis
2017-04-04	LassoBacktracking	Modelling Interactions in High-Dimensional Data with Backtracking
2017-04-04	MultiVarSel	Variable Selection in the Multivariate Linear Model
2017-04-04	sensitivityfull	Sensitivity Analysis for Full Matching in Observational Studies
2017-04-04	survival	Survival Analysis
2017-04-04	TSMN	Truncated Scale Mixtures of Normal Distributions
2017-04-04	VetResearchLMM	Linear Mixed Models - An Introduction with Applications in Veterinary Research
2017-04-04	weightr	Estimating Weight-Function Models for Publication Bias
2017-04-03	afmToolkit	Functions for Atomic Force Microscope Force-Distance Curves Analysis
2017-04-03	benchr	High Precise Measurement of R Expressions Execution Time
2017-04-03	BigVAR	Dimension Reduction Methods for Multivariate Time Series
2017-04-03	btb	Beyond the Border
2017-04-03	Calculator.LR.FNs	Calculator for LR Fuzzy Numbers
2017-04-03	downsize	A Tool to Downsize Large Workflows for Testing
2017-04-03	evmix	Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
2017-04-03	FSInteract	Fast Searches for Interactions
2017-04-03	goftest	Classical Goodness-of-Fit Tests for Univariate Distributions
2017-04-03	groupsubsetselection	Group Subset Selection
2017-04-03	HMR	Flux Estimation with Static Chamber Data
2017-04-03	mrbsizeR	Scale Space Multiresolution Analysis of Random Signals
2017-04-03	nlshelper	Convenient Functions for Non-Linear Regression
2017-04-03	RCEIM	R Cross Entropy Inspired Method for Optimization
2017-04-03	relMix	Relationship Inference for DNA Mixtures
2017-04-03	RPtests	Goodness of Fit Tests for High-Dimensional Linear Regression Models
2017-04-03	RsimMosaic	R Simple Image Mosaic Creation Library
2017-04-03	scuba	Diving Calculations and Decompression Models
2017-04-03	sensors4plumes	Test and Optimise Sampling Designs Based on Plume Simulations
2017-04-03	sizeMat	Estimate Size at Sexual Maturity
2017-04-03	UPMASK	Unsupervised Photometric Membership Assignment in Stellar Clusters
2017-04-03	vesselr	Gradient and Vesselness Tools for Arrays and NIfTI Images
2017-04-03	xbreed	Genomic Simulation of Purebred and Crossbred Populations
2017-04-03	xyz	The 'xyz' Algorithm for Fast Interaction Search in High-Dimensional Data
2017-04-02	enrichR	Provides an R Interface to 'Enrichr'
2017-04-02	ggspatial	Spatial Data Framework for ggplot2
2017-04-02	lsgl	Linear Multiple Output Sparse Group Lasso
2017-04-02	medicare	Tools for Obtaining and Cleaning Medicare Public Use Files
2017-04-02	miscor	Miscellaneous Functions for the Correlation Coefficient
2017-04-02	msgl	High Dimensional Multiclass Classification Using Sparse Group Lasso
2017-04-02	RApiDatetime	R API Datetime
2017-04-02	sglOptim	Generic Sparse Group Lasso Solver
2017-04-02	xergm	Extensions of Exponential Random Graph Models
2017-04-01	corpcor	Efficient Estimation of Covariance and (Partial) Correlation
2017-04-01	EMVC	Entropy Minimization over Variable Clusters
2017-04-01	grapes	Make Binary Operators
2017-04-01	hgm	Holonomic Gradient Method and Gradient Descent
2017-04-01	InterfaceqPCR	GUI to Analyse qPCR Results after PMA Treatment or not
2017-04-01	meteoForecast	Numerical Weather Predictions
2017-04-01	ncdf4	Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
2017-04-01	SARP.moodle	XML Output Functions for Easy Creation of Moodle Questions
2017-04-01	sss	Tools for Importing Files in the Triple-s (Standard Survey Structure) Format
2017-04-01	StMoMo	Stochastic Mortality Modelling
2017-04-01	tensorr	Sparse Tensors in R
2017-04-01	tnam	Temporal Network Autocorrelation Models (TNAM)
2017-04-01	VBmix	Variational Bayesian Mixture Models
2017-03-31	aptg	Automatic Phylogenetic Tree Generator
2017-03-31	bipartite	Visualising Bipartite Networks and Calculating Some (Ecological) Indices
2017-03-31	btergm	Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
2017-03-31	cobs	Constrained B-Splines (Sparse Matrix Based)
2017-03-31	datautils	Timestamps and Advanced Plotting
2017-03-31	focusedMDS	Focused, Interactive Multidimensional Scaling
2017-03-31	ggdmc	Dynamic Model of Choice with Parallel Computation, and C++ Capabilities
2017-03-31	gRim	Graphical Interaction Models
2017-03-31	kscons	A Bayesian Approach for Protein Residue Contact Prediction using the Knob-Socket Model of Protein Tertiary Structure
2017-03-31	lava.tobit	Latent Variable Models with Censored and Binary Outcomes
2017-03-31	NADA	Nondetects and Data Analysis for Environmental Data
2017-03-31	PCGSE	Principal Component Gene Set Enrichment
2017-03-31	RXKCD	Get XKCD Comic from R
2017-03-31	semiArtificial	Generator of Semi-Artificial Data
2017-03-31	xergm.common	Common Infrastructure for Extensions of Exponential Random Graph Models
2017-03-30	animation	A Gallery of Animations in Statistics and Utilities to Create Animations
2017-03-30	gasfluxes	Greenhouse Gas Flux Calculation from Chamber Measurements
2017-03-30	mets	Analysis of Multivariate Event Times
2017-03-30	mstR	Procedures to Generate Patterns under Multistage Testing
2017-03-30	optim.functions	Standard Benchmark Optimization Functions
2017-03-30	Rd2roxygen	Convert Rd to 'Roxygen' Documentation
2017-03-30	smnet	Smoothing for Stream Network Data
2017-03-30	sodium	A Modern and Easy-to-Use Crypto Library
2017-03-30	spatstat.local	Extension to 'spatstat' for Local Composite Likelihood
2017-03-30	webp	A New Format for Lossless and Lossy Image Compression
2017-03-29	AMCTestmakeR	Generate LaTeX Code for Auto-Multiple-Choice (AMC)
2017-03-29	ApacheLogProcessor	Process the Apache Web Server Log Files
2017-03-29	apaStyle	Generate APA Tables for MS Word
2017-03-29	BLModel	Black-Litterman Posterior Distribution
2017-03-29	care	High-Dimensional Regression and CAR Score Variable Selection
2017-03-29	expm	Matrix Exponential, Log, 'etc'
2017-03-29	fam2r	From 'Familias' to R
2017-03-29	ggQC	Quality Control Charts for the Grammar of Graphics Plotting System
2017-03-29	metavcov	Variance-Covariance Matrix for Multivariate Meta-Analysis
2017-03-29	moezipfR	Marshall-Olkin Extended Zipf
2017-03-29	odeintr	C++ ODE Solvers Compiled on-Demand
2017-03-29	patternize	Quantification of Color Pattern Variation
2017-03-29	tilegramsR	R Spatial Data for Tilegrams
2017-03-29	tsqn	Applications of the Qn Estimator to Time Series (Univariate and Multivariate)
2017-03-28	itan	Item Analysis for Multiple Choice Tests
2017-03-28	mmeta	Multivariate Meta-Analysis
2017-03-28	sejmRP	An Information About Deputies and Votings in Polish Diet from Seventh to Eighth Term of Office
2017-03-28	shinyHeatmaply	Deploy 'heatmaply' using 'shiny'
2017-03-28	XBRL	Extraction of Business Financial Information from 'XBRL' Documents
2017-03-27	dc3net	Inferring Condition-Specific Networks via Differential Network Inference
2017-03-27	flexsurv	Flexible Parametric Survival and Multi-State Models
2017-03-27	loo	Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
2017-03-27	lulcc	Land Use Change Modelling in R
2017-03-27	mtconnectR	Read Data from Delimited 'MTConnect' Data Files and Perform some Analysis
2017-03-27	pgirmess	Data Analysis in Ecology
2017-03-27	pooh	Partial Orders and Relations
2017-03-27	qrcm	Quantile Regression Coefficients Modeling
2017-03-27	semPlot	Path Diagrams and Visual Analysis of Various SEM Packages' Output
2017-03-27	TSHRC	Two Stage Hazard Rate Comparison
2017-03-27	ump	Uniformly Most Powerful Tests
2017-03-26	aster2	Aster Models
2017-03-26	datapasta	R Tools for Data Copy-Pasta
2017-03-26	FamEvent	Family Age-at-Onset Data Simulation and Penetrance Estimation
2017-03-26	frair	Tools for Functional Response Analysis
2017-03-26	gems	Generalized Multistate Simulation Model
2017-03-26	MVLM	Multivariate Linear Model with Analytic p-Values
2017-03-26	NetworkRiskMeasures	Risk Measures for (Financial) Networks
2017-03-25	fftwtools	Wrapper for 'FFTW3' Includes: One-Dimensional Univariate, One-Dimensional Multivariate, and Two-Dimensional Transform
2017-03-25	lattice	Trellis Graphics for R
2017-03-25	maptools	Tools for Reading and Handling Spatial Objects
2017-03-25	pwr	Basic Functions for Power Analysis
2017-03-25	slimrec	Sparse Linear Method to Predict Ratings and Top-N Recommendations
2017-03-25	support.BWS2	Basic Functions for Supporting an Implementation of Case 2 Best-Worst Scaling
2017-03-25	TeachBayes	Teaching Bayesian Inference
2017-03-25	vortexRdata	Example Data for R Package 'vortexR'
2017-03-24	aroma.affymetrix	Analysis of Large Affymetrix Microarray Data Sets
2017-03-24	bkmr	Bayesian Kernel Machine Regression
2017-03-24	docstring	Provides Docstring Capabilities to R Functions
2017-03-24	fitdistrplus	Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
2017-03-24	FuzzyR	Fuzzy Logic Toolkit for R
2017-03-24	GraphKit	Estimating Structural Invariants of Graphical Models
2017-03-24	IPWsurvival	Propensity Score Based Adjusted Survival Curves and Corresponding Log-Rank Statistic
2017-03-24	metagear	Comprehensive Research Synthesis Tools for Systematic Reviews and Meta-Analysis
2017-03-24	PCFAM	Computation of Ancestry Scores with Mixed Families and Unrelated Individuals
2017-03-24	PortfolioEffectHFT	High Frequency Portfolio Analytics by PortfolioEffect
2017-03-24	rbamtools	Read and Write BAM (Binary Alignment) Files
2017-03-24	rriskDistributions	Fitting Distributions to Given Data or Known Quantiles
2017-03-24	viridisLite	Default Color Maps from 'matplotlib' (Lite Version)
2017-03-23	affluenceIndex	Affluence Indices
2017-03-23	aLFQ	Estimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data
2017-03-23	diverse	Diversity Measures for Complex Systems
2017-03-23	lero.lero	Generate 'Lero Lero' Quotes
2017-03-23	NormPsy	Normalisation of Psychometric Tests
2017-03-23	openxlsx	Read, Write and Edit XLSX Files
2017-03-23	oXim	Oxycline Index from Matrix Echograms
2017-03-23	sbart	Sequential BART for Imputation of Missing Covariates
2017-03-23	simctest	Safe Implementation of Monte Carlo Tests
2017-03-23	spatsurv	Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
2017-03-23	summariser	Easy Calculation and Visualisation of Confidence Intervals
2017-03-23	tsxtreme	Bayesian Modelling of Extremal Dependence in Time Series
2017-03-22	benford.analysis	Benford Analysis for Data Validation and Forensic Analytics
2017-03-22	Biocomb	Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis
2017-03-22	CVR	Canonical Variate Regression
2017-03-22	margins	Marginal Effects for Model Objects
2017-03-22	mMPA	Implementation of Marker-Assisted Mini-Pooling with Algorithm
2017-03-22	neuropsychology	Toolbox for Psychologists, Neuropsychologists and Neuroscientists
2017-03-22	pathmapping	Compute Deviation and Correspondence Between Spatial Paths
2017-03-22	polyclip	Polygon Clipping
2017-03-22	randomizeBE	Create a Random List for Crossover Studies
2017-03-22	survutils	Utility Functions for Survival Analysis
2017-03-22	ukds	Reproducible Data Retrieval from the UK Data Service
2017-03-22	vipor	Plot Categorical Data Using Quasirandom Noise and Density Estimates
2017-03-22	xlsimple	'XLConnect' Wrapper
2017-03-21	addhazard	Fit Additive Hazards Models for Survival Analysis
2017-03-21	averisk	Calculation of Average Population Attributable Fractions and Confidence Intervals
2017-03-21	BWStest	Baumgartner Weiss Schindler Test of Equal Distributions
2017-03-21	censReg	Censored Regression (Tobit) Models
2017-03-21	distory	Distance Between Phylogenetic Histories
2017-03-21	effsize	Efficient Effect Size Computation
2017-03-21	ega	Error Grid Analysis
2017-03-21	FMC	Factorial Experiments with Minimum Level Changes
2017-03-21	gbm	Generalized Boosted Regression Models
2017-03-21	gpg	GNU Privacy Guard for R
2017-03-21	interactionTest	Calculates Critical Test Statistics to Control False Discovery and Familywise Error Rates in Marginal Effects Plots
2017-03-21	orgutils	Helper Functions for Org Files
2017-03-21	pacotest	Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas
2017-03-21	photobiologyPlants	Plant Photobiology Related Functions and Data
2017-03-21	pkgconfig	Private Configuration for 'R' Packages
2017-03-21	qmethod	Analysis of Subjective Perspectives Using Q Methodology
2017-03-21	qrLMM	Quantile Regression for Linear Mixed-Effects Models
2017-03-21	qrNLMM	Quantile Regression for Nonlinear Mixed-Effects Models
2017-03-21	rnaturalearth	World Map Data from Natural Earth
2017-03-21	rolr	Finding Optimal Three-Group Splits Based on a Survival Outcome
2017-03-21	rsvg	Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays
2017-03-21	stmgp	Rapid and Accurate Genetic Prediction Modeling for Genome-Wide Association or Whole-Genome Sequencing Study Data
2017-03-21	TauStar	Efficient Computation and Testing of the Bergsma-Dassios Sign Covariance
2017-03-21	UpSetR	A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
2017-03-20	disposables	Create Disposable R Packages for Testing
2017-03-20	EstimateGroupNetwork	Perform the Joint Graphical Lasso and Selects Tuning Parameters
2017-03-20	evclass	Evidential Distance-Based Classification
2017-03-20	ggsn	North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'
2017-03-20	gRbase	A Package for Graphical Modelling in R
2017-03-20	LNIRT	LogNormal Response Time Item Response Theory Models
2017-03-20	LW1949	An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)
2017-03-20	photobiologyInOut	Read Spectral and Logged Data from Foreign Files
2017-03-20	photobiologyWavebands	Waveband Definitions for UV, VIS, and IR Radiation
2017-03-20	RAC	R Package for Aqua Culture
2017-03-20	rdefra	Interact with the UK AIR Pollution Database from DEFRA
2017-03-20	refGenome	Gene and Splice Site Annotation Using Annotation Data from Ensembl and UCSC Genome Browsers
2017-03-20	Rvoterdistance	Calculates the Distance Between Voter and Multiple Polling Locations
2017-03-20	sadists	Some Additional Distributions
2017-03-20	sticky	Persist Attributes Across Data Operations
2017-03-20	TreeSim	Simulating Phylogenetic Trees
2017-03-19	dbscan	Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
2017-03-19	fasteraster	Raster Image Processing and Vector Recognition
2017-03-19	hyfo	Hydrology and Climate Forecasting
2017-03-19	shinyShortcut	Creates an Executable Shortcut for Shiny Applications
2017-03-19	supc	The Self-Updating Process Clustering Algorithms
2017-03-18	brotli	A Compression Format Optimized for the Web
2017-03-18	networkD3	D3 JavaScript Network Graphs from R
2017-03-18	OSCV	One-Sided Cross-Validation
2017-03-18	pcrsim	Simulation of the Forensic DNA Process
2017-03-18	PDQutils	PDQ Functions via Gram Charlier, Edgeworth, and Cornish Fisher Approximations
2017-03-18	SpatMCA	Regularized Spatial Maximum Covariance Analysis
2017-03-18	SpatPCA	Regularized Principal Component Analysis for Spatial Data
2017-03-17	adhoc	Calculate Ad Hoc Distance Thresholds for DNA Barcoding Identification
2017-03-17	BASS	Bayesian Adaptive Spline Surfaces
2017-03-17	chemometrics	Multivariate Statistical Analysis in Chemometrics
2017-03-17	denseFLMM	Functional Linear Mixed Models for Densely Sampled Data
2017-03-17	frontier	Stochastic Frontier Analysis
2017-03-17	ropercenter	Reproducible Data Retrieval from the Roper Center Data Archive
2017-03-17	textreg	n-Gram Text Regression, aka Concise Comparative Summarization
2017-03-16	BCSub	A Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering)
2017-03-16	biosignalEMG	Tools for Electromyogram Signals (EMG) Analysis
2017-03-16	cir	Centered Isotonic Regression and Dose-Response Utilities
2017-03-16	cluster	"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
2017-03-16	CNull	Fast Algorithms for Frequency-Preserving Null Models in Ecology
2017-03-16	english	Translate Integers into English
2017-03-16	FlexDir	Tools to Work with the Flexible Dirichlet Distribution
2017-03-16	MDMR	Multivariate Distance Matrix Regression
2017-03-16	micEcon	Microeconomic Analysis and Modelling
2017-03-16	micEconAids	Demand Analysis with the Almost Ideal Demand System (AIDS)
2017-03-16	missMDA	Handling Missing Values with Multivariate Data Analysis
2017-03-16	mixAK	Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering
2017-03-16	potts	Markov Chain Monte Carlo for Potts Models
2017-03-16	qqman	Q-Q and Manhattan Plots for GWAS Data
2017-03-16	RankingProject	The Ranking Project: Visualizations for Comparing Populations
2017-03-16	rolypoly	Identifying Trait-Relevant Functional Annotations
2017-03-15	AdaptGauss	Gaussian Mixture Models (GMM)
2017-03-15	aster	Aster Models
2017-03-15	dynaTree	Dynamic Trees for Learning and Design
2017-03-15	fuzzyRankTests	Fuzzy Rank Tests and Confidence Intervals
2017-03-15	gee4	Generalised Estimating Equations (GEE/WGEE) using 'Armadillo' and S4
2017-03-15	GERGM	Estimation and Fit Diagnostics for Generalized Exponential Random Graph Models
2017-03-15	GPvam	Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
2017-03-15	mitml	Tools for Multiple Imputation in Multilevel Modeling
2017-03-15	mlr	Machine Learning in R
2017-03-15	pbkrtest	Parametric Bootstrap and Kenward Roger Based Methods for Mixed Model Comparison
2017-03-15	redist	Markov Chain Monte Carlo Methods for Redistricting Simulation
2017-03-14	clusternomics	Integrative Clustering for Heterogeneous Biomedical Datasets
2017-03-14	copCAR	Fitting the copCAR Regression Model for Discrete Areal Data
2017-03-14	evoper	Evolutionary Parameter Estimation for 'Repast Simphony' Models
2017-03-14	FLightR	Hidden Markov Model for Solar Geolocation Archival Tags
2017-03-14	gatepoints	Easily Gate or Select Points on a Scatter Plot
2017-03-14	linbin	Binning and Plotting of Linearly Referenced Data
2017-03-14	outreg	Regression Table for Publication
2017-03-14	scalpel	Processes Calcium Imaging Data
2017-03-14	sigmoid	Sigmoid Functions for Machine Learning
2017-03-14	simboot	Simultaneous Inference for Diversity Indices
2017-03-14	StereoMorph	Stereo Camera Calibration and Reconstruction
2017-03-13	ABCanalysis	Computed ABC Analysis
2017-03-13	bioOED	Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation
2017-03-13	collpcm	Collapsed Latent Position Cluster Model for Social Networks
2017-03-13	Conigrave	Flexible Tools for Multiple Imputation
2017-03-13	discSurv	Discrete Time Survival Analysis
2017-03-13	gazepath	Parse Eye-Tracking Data into Fixations
2017-03-13	optCluster	Determine Optimal Clustering Algorithm and Number of Clusters
2017-03-13	ProfessR	Grades Setting and Exam Maker
2017-03-13	radmixture	Calculate Population Stratification
2017-03-13	revealjs	R Markdown Format for 'reveal.js' Presentations
2017-03-13	WhopGenome	High-Speed Processing of VCF, FASTA and Alignment Data
2017-03-12	bigFastlm	Fast Linear Models for Objects from the 'bigmemory' Package
2017-03-12	cricketr	Analyze Cricketers Based on ESPN Cricinfo Statsguru
2017-03-12	FastImputation	Learn from Training Data then Quickly Fill in Missing Data
2017-03-12	gstat	Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
2017-03-12	hydrogeo	Groundwater Data Presentation and Interpretation
2017-03-11	BANFF	Bayesian Network Feature Finder
2017-03-11	cmpprocess	Flexible Modeling of Count Processes
2017-03-11	DHARMa	Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
2017-03-11	gradDescent	Gradient Descent for Regression Tasks
2017-03-11	iNextPD	Interpolation and Extrapolation for Phylogenetic Diversity
2017-03-11	kequate	The Kernel Method of Test Equating
2017-03-11	quantoptr	Algorithms for Quantile- And Mean-Optimal Treatment Regimes
2017-03-11	rdataretriever	R Interface to the Data Retriever
2017-03-11	stratification	Univariate Stratification of Survey Populations
2017-03-10	BBmisc	Miscellaneous Helper Functions for B. Bischl
2017-03-10	docxtools	Tools for R Markdown to Docx Documents
2017-03-10	DREGAR	Regularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR)
2017-03-10	FSAdata	Data to Support Fish Stock Assessment ('FSA') Package
2017-03-10	gmp	Multiple Precision Arithmetic
2017-03-10	HoRM	Supplemental Functions and Datasets for "Handbook of Regression Methods"
2017-03-10	LeafArea	Rapid Digital Image Analysis of Leaf Area
2017-03-10	mixtools	Tools for Analyzing Finite Mixture Models
2017-03-10	qut	Quantile Universal Threshold
2017-03-10	randomForest.ddR	Distributed 'randomForest' for Big Data using 'ddR' API
2017-03-10	rinat	Access iNaturalist Data Through APIs
2017-03-10	SigOptR	R API Wrapper for SigOpt
2017-03-10	Stickbreaker	Fits Stickbreaking, Multiplicative and Additive Models to Data
2017-03-09	CONS	Consonance Analysis Module
2017-03-09	DAAGbio	Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences
2017-03-09	emon	Tools for Environmental and Ecological Survey Design
2017-03-09	FuzzyAHP	(Fuzzy) AHP Calculation
2017-03-09	gnumeric	Read Data from Files Readable by 'gnumeric'
2017-03-09	iMessager	Send 'iMessages' from R
2017-03-09	imputeR	A General Imputation Framework in R
2017-03-09	iSDM	Invasive Species Distribution Modelling
2017-03-09	mvctm	Multivariate Variance Components Tests for Multilevel Data
2017-03-09	oglmx	Estimation of Ordered Generalized Linear Models
2017-03-09	RJSDMX	R Interface to SDMX Web Services
2017-03-09	SymTS	Symmetric Tempered Stable Distributions
2017-03-09	systemfit	Estimating Systems of Simultaneous Equations
2017-03-09	taxonomizr	Functions to Work with NCBI Accessions and Taxonomy
2017-03-09	Ultimixt	Bayesian Analysis of Location-Scale Mixture Models using a Weakly Informative Prior
2017-03-09	VertexSort	Network Hierarchical Structure and Randomization
2017-03-08	badger	Badge for R Package
2017-03-08	BCellMA	B Cell Receptor Somatic Hyper Mutation Analysis
2017-03-08	binomSamSize	Confidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling
2017-03-08	CatEncoders	Encoders for Categorical Variables
2017-03-08	CNLTtsa	Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
2017-03-08	MBA	Multilevel B-Spline Approximation
2017-03-08	NHLData	Scores for Every Season Since the Founding of the NHL in 1917
2017-03-08	nhlscrapr	Compiling the NHL Real Time Scoring System Database for easy use in R
2017-03-08	prop.comb.RR	Analyzing Combination of Proportions and Relative Risk
2017-03-08	readOffice	Read Text Out of Modern Office Files
2017-03-08	STMedianPolish	Spatio-Temporal Median Polish
2017-03-08	WhiteStripe	White Matter Normalization for Magnetic Resonance Images using Whitestripe
2017-03-07	ALSM	Companion to Applied Linear Statistical Models
2017-03-07	cpr	Control Polygon Reduction
2017-03-07	fdaMixed	Functional Data Analysis in a Mixed Model Framework
2017-03-07	fslr	Wrapper Functions for FSL ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')
2017-03-07	GDAtools	A Toolbox for the Analysis of Categorical Data in Social Sciences, and Especially Geometric Data Analysis
2017-03-07	GetoptLong	Parsing Command-Line Arguments and Variable Interpolation
2017-03-07	otinference	Inference for Optimal Transport
2017-03-07	quadrupen	Sparsity by Worst-Case Quadratic Penalties
2017-03-07	remindR	Insert and Extract "Reminders" from Function Comments
2017-03-07	rkt	Mann-Kendall Test, Seasonal and Regional Kendall Tests
2017-03-07	SpecsVerification	Forecast Verification Routines for Ensemble Forecasts of Weather and Climate
2017-03-07	spm12r	Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'
2017-03-06	BMAmevt	Multivariate Extremes: Bayesian Estimation of the Spectral Measure
2017-03-06	DySeq	Functions for Dyadic Sequence Analyses
2017-03-06	edarf	Exploratory Data Analysis using Random Forests
2017-03-06	funchir	Convenience Functions by Michael Chirico
2017-03-06	gt4ireval	Generalizability Theory for Information Retrieval Evaluation
2017-03-06	infoDecompuTE	Information Decomposition of Two-Phase Experiments
2017-03-06	interflex	Multiplicative Interaction Models Diagnostics and Visualization
2017-03-06	mc2d	Tools for Two-Dimensional Monte-Carlo Simulations
2017-03-06	MLID	Multilevel Index of Dissimilarity
2017-03-06	prodlim	Product-Limit Estimation for Censored Event History Analysis
2017-03-06	ptw	Parametric Time Warping
2017-03-06	Rcssplot	Styling of Graphics using Cascading Style Sheets
2017-03-06	twilio	An Interface to the Twilio API for R
2017-03-05	IGM.MEA	IGM MEA Analysis
2017-03-05	imPois	Imprecise Inference for Poisson Sampling Models
2017-03-05	VarED	Variance Estimation using Difference-Based Methods
2017-03-04	CNLTreg	Complex-Valued Wavelet Lifting for Signal Denoising
2017-03-04	CPsurv	Nonparametric Change Point Estimation for Survival Data
2017-03-04	icarus	Calibrates and Reweights Units in Samples
2017-03-04	maGUI	A Graphical User Interface for Microarray Data Analysis and Annotation
2017-03-04	RcppShark	R Interface to the Shark Machine Learning Library
2017-03-04	rotl	Interface to the 'Open Tree of Life' API
2017-03-04	SubgrpID	Patient Subgroup Identification for Clinical Drug Development
2017-03-03	aucm	AUC Maximization
2017-03-03	brt	Biological Relevance Testing
2017-03-03	CensSpatial	Censored Spatial Models
2017-03-03	cghRA	Array CGH Data Analysis and Visualization
2017-03-03	cronR	Schedule R Scripts and Processes with the 'cron' Job Scheduler
2017-03-03	Demerelate	Functions to Calculate Relatedness on Diploid Genetic Data
2017-03-03	disco	Discordance and Concordance of Transcriptomic Responses
2017-03-03	Dpit	Distribution Pitting
2017-03-03	learningCurve	An Implementation of Crawford's and Wright's Learning Curve Production Functions
2017-03-03	MDPtoolbox	Markov Decision Processes Toolbox
2017-03-03	neurobase	'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects
2017-03-03	sskm	Stable Sparse K-Means
2017-03-03	texreg	Conversion of R Regression Output to LaTeX or HTML Tables
2017-03-02	BNPdensity	Ferguson-Klass Type Algorithm for Posterior Normalized Random Measures
2017-03-02	Brq	Bayesian Analysis of Quantile Regression Models
2017-03-02	CompetingRisk	The Semi-Parametric Cumulative Incidence Function
2017-03-02	cpt	Classification Permutation Test
2017-03-02	cropdatape	Open Data of Agricultural Production of Crops of Peru
2017-03-02	DiversityOccupancy	Building Diversity Models from Multiple Species Occupancy Models
2017-03-02	erp.easy	Event-Related Potential (ERP) Data Exploration Made Easy
2017-03-02	fitplc	Fit Hydraulic Vulnerability Curves
2017-03-02	gaiah	Genetic and Isotopic Assignment Accounting for Habitat Suitability
2017-03-02	isa2	The Iterative Signature Algorithm
2017-03-02	keypress	Wait for a Key Press in a Terminal
2017-03-02	kirby21.fmri	Example Functional Imaging Data from the Multi-Modal MRI Reproducibility Resource
2017-03-02	kirby21.t1	Example T1 Structural Data from the Multi-Modal MRI Reproducibility Resource
2017-03-02	maxstat	Maximally Selected Rank Statistics
2017-03-02	MetaComp	EDGE Taxonomy Assignments Visualization
2017-03-02	msgtools	Tools for Developing Diagnostic Messages
2017-03-02	mvtnorm	Multivariate Normal and t Distributions
2017-03-02	parsedate	Recognize and Parse Dates in Various Formats, Including All ISO 8601 Formats
2017-03-02	pingr	Check if a Remote Computer is Up
2017-03-02	sand	Statistical Analysis of Network Data with R
2017-03-02	STPGA	Selection of Training Populations by Genetic Algorithm
2017-03-02	swirl	Learn R, in R
2017-03-02	WPKDE	Weighted Piecewise Kernel Density Estimation
2017-03-02	xyloplot	A Method for Creating Xylophone-Like Frequency Density Plots
2017-03-01	dotenv	Load Environment Variables from '.env'
2017-03-01	exactRankTests	Exact Distributions for Rank and Permutation Tests
2017-03-01	ipred	Improved Predictors
2017-03-01	plspolychaos	Sensitivity Indexes from Polynomial Chaos Expansions and PLS
2017-03-01	polychaosbasics	Sensitivity Indexes Calculated from Polynomial Chaos Expansions
2017-03-01	pssm	Piecewise Exponential Model for Time to Progression and Time from Progression to Death
2017-03-01	R4CouchDB	A R Convenience Layer for CouchDB 2.0
2017-02-28	dglars	Differential Geometric Least Angle Regression
2017-02-28	DiffNet	Detection of Statistically Significant Changes in Complex Biological Networks
2017-02-28	funtimes	Functions for Time Series Analysis
2017-02-28	GLDreg	Fit GLD Regression Model and GLD Quantile Regression Model to Empirical Data
2017-02-28	glm.ddR	Distributed 'glm' for Big Data using 'ddR' API
2017-02-28	lumendb	Lumen Database API Client
2017-02-28	operator.tools	Utilities for Working with R's Operators
2017-02-28	PRISMA	Protocol Inspection and State Machine Analysis
2017-02-28	R.filesets	Easy Handling of and Access to Files Organized in Structured Directories
2017-02-28	randgeo	Generate Random 'WKT' or 'GeoJSON'
2017-02-28	rcc	Parametric Bootstrapping to Control Rank Conditional Coverage
2017-02-28	ResourceSelection	Resource Selection (Probability) Functions for Use-Availability Data
2017-02-28	RPMM	Recursively Partitioned Mixture Model
2017-02-27	apa	Format Outputs of Statistical Tests According to APA Guidelines
2017-02-27	bgmm	Gaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling
2017-02-27	blockcluster	Coclustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
2017-02-27	bootstrap	Functions for the Book "An Introduction to the Bootstrap"
2017-02-27	CAvariants	Correspondence Analysis Variants
2017-02-27	diffr	Display Differences Between Two Files using Codediff Library
2017-02-27	dirmcmc	Directional Metropolis Hastings Algorithm
2017-02-27	easyPubMed	Search and Retrieve Scientific Publication Records from PubMed
2017-02-27	extdplyr	Data Manipulation Extensions of 'Dplyr' and 'Tidyr'
2017-02-27	fontHind	Additional 'ggplot2' Themes Using 'Hind' Fonts
2017-02-27	fontMPlus	Additional 'ggplot2' Themes Using 'M+' Fonts
2017-02-27	gbts	Hyperparameter Search for Gradient Boosted Trees
2017-02-27	leafletCN	An R Gallery for China and Other Geojson Choropleth Map in Leaflet
2017-02-27	misreport	Statistical Analysis of Misreporting on Sensitive Survey Questions
2017-02-27	pmmlTransformations	Transforms Input Data from a PMML Perspective
2017-02-27	qap	Heuristics for the Quadratic Assignment Problem (QAP)
2017-02-27	ridge	Ridge Regression with Automatic Selection of the Penalty Parameter
2017-02-26	automagic	Automagically Document and Install Packages Necessary to Run R Code
2017-02-26	AWR.Kinesis	Amazon 'Kinesis' Consumer Application for Stream Processing
2017-02-26	gdistance	Distances and Routes on Geographical Grids
2017-02-26	hrbrthemes	Additional Themes, Theme Components and Utilities for 'ggplot2'
2017-02-26	IDPSurvival	Imprecise Dirichlet Process for Survival Analysis
2017-02-26	MultisiteMediation	Causal Mediation Analysis in Multisite Trials
2017-02-26	stream	Infrastructure for Data Stream Mining
2017-02-25	betacal	Beta Calibration
2017-02-25	mixR	Finite Mixture Modeling for Raw and Binned Data
2017-02-25	recexcavAAR	3D Reconstruction of Archaeological Excavations
2017-02-25	RefFreeEWAS	EWAS using Reference-Free DNA Methylation Mixture Deconvolution
2017-02-24	BayesS5	Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5)
2017-02-24	ccafs	Client for 'CCAFS' 'GCM' Data
2017-02-24	europop	Historical Populations of European Cities, 1500-1800
2017-02-24	falconx	Finding Allele-Specific Copy Number in Whole-Exome Sequencing Data
2017-02-24	ggraph	An Implementation of Grammar of Graphics for Graphs and Networks
2017-02-24	gss	General Smoothing Splines
2017-02-24	hasseDiagram	Drawing Hasse Diagram
2017-02-24	lavaan	Latent Variable Analysis
2017-02-24	miscset	Miscellaneous Tools Set
2017-02-24	OpenRepGrid	Tools to Analyse Repertory Grid Data
2017-02-24	profileR	Profile Analysis of Multivariate Data in R
2017-02-24	som.nn	Topological k-NN Classifier Based on Self-Organising Maps
2017-02-24	TAR	Bayesian Modeling of Autoregressive Threshold Time Series Models
2017-02-24	walkr	Random Walks in the Intersection of Hyperplanes and the N-Simplex
2017-02-23	bestglm	Best Subset GLM
2017-02-23	EnviroPRA	Environmental Probabilistic Risk Assessment Tools
2017-02-23	gower	Gower's Distance
2017-02-23	GsymPoint	Estimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests
2017-02-23	InvasionCorrection	Invasion Correction
2017-02-23	Mcomp	Data from the M-Competitions
2017-02-23	naptime	A Flexible and Robust Sys.sleep() Replacement
2017-02-23	neighbr	Classification, Regression, Clustering with K Nearest Neighbors
2017-02-23	prefeR	R Package for Pairwise Preference Elicitation
2017-02-23	robustarima	Robust ARIMA Modeling
2017-02-23	tuckerR.mmgg	Three-Mode Principal Components Analysis
2017-02-22	BayesSpec	Bayesian Spectral Analysis Techniques
2017-02-22	BCC1997	Calculation of Option Prices Based on a Universal Solution
2017-02-22	bsearchtools	Binary Search Tools
2017-02-22	choroplethrAdmin1	Contains an Administrative-Level-1 Map of the World
2017-02-22	DecorateR	Fit and Deploy DECORATE Trees
2017-02-22	idendr0	Interactive Dendrograms
2017-02-22	Mangrove	Risk Prediction on Trees
2017-02-22	R2OpenBUGS	Running OpenBUGS from R
2017-02-22	RWiener	Wiener Process Distribution Functions
2017-02-22	TSP	Traveling Salesperson Problem (TSP)
2017-02-21	AMModels	Adaptive Management Model Manager
2017-02-21	fifer	A Biostatisticians Toolbox for Various Activities, Including Plotting, Data Cleanup, and Data Analysis
2017-02-21	lclGWAS	Efficient Estimation of Discrete-Time Multivariate Frailty Model Using Exact Likelihood Function for Grouped Survival Data
2017-02-21	leaflet	Create Interactive Web Maps with the JavaScript 'Leaflet' Library
2017-02-21	mle.tools	Expected/Observed Fisher Information and Bias-Corrected Maximum Likelihood Estimate(s)
2017-02-21	rnaturalearthdata	World Vector Map Data from Natural Earth Used in 'rnaturalearth'
2017-02-21	stdvectors	C++ Standard Library Vectors in R
2017-02-21	vote	Election Vote Counting
2017-02-20	AWR.KMS	A Simple Client to the 'AWS' Key Management Service
2017-02-20	BayesFM	Bayesian Inference for Factor Modeling
2017-02-20	CEoptim	Cross-Entropy R Package for Optimization
2017-02-20	colorr	Color Palettes for EPL, MLB, NBA, NHL, and NFL Teams
2017-02-20	dlib	Allow Access to the 'Dlib' C++ Library
2017-02-20	fileplyr	Chunk Processing or Split-Apply-Combine on Delimited Files and Distributed Dataframes
2017-02-20	genemodel	Gene Model Plotting in R
2017-02-20	gMOIP	'2D plots of linear or integer programming models'
2017-02-20	GSparO	Group Sparse Optimization
2017-02-20	OxyBS	Processing of Oxy-Bisulfite Microarray Data
2017-02-20	pawacc	Physical Activity with Accelerometers
2017-02-20	pollstR	Client for the HuffPost Pollster API
2017-02-20	Qtools	Utilities for Quantiles
2017-02-20	survRM2	Comparing Restricted Mean Survival Time
2017-02-20	textcat	N-Gram Based Text Categorization
2017-02-20	W3CMarkupValidator	R Interface to W3C Markup Validation Services
2017-02-19	eAnalytics	Dynamic Web-Based Analytics for the Energy Industry
2017-02-19	ggthemes	Extra Themes, Scales and Geoms for 'ggplot2'
2017-02-19	ROCt	Time-Dependent ROC Curve Estimators and Expected Utility Functions
2017-02-19	syllable	A Small Collection of Syllable Counting Functions
2017-02-19	upmfit	Unified Probability Model Fitting
2017-02-18	ALA4R	Atlas of Living Australia (ALA) Data and Resources in R
2017-02-18	AMCP	A Model Comparison Perspective
2017-02-18	bioimagetools	Tools for Microscopy Imaging
2017-02-18	GHap	Genome-Wide Haplotyping
2017-02-18	helsinki	R Tools for Helsinki Open Data
2017-02-18	mixtox	Curve Fitting and Mixture Toxicity Assessment
2017-02-18	stringr	Simple, Consistent Wrappers for Common String Operations
2017-02-18	yorkr	Analyze Cricket Performances Based on Data from Cricsheet
2017-02-17	BDWreg	Bayesian Inference for Discrete Weibull Regression
2017-02-17	BioPET	Biomarker Prognostic Enrichment Tool
2017-02-17	educineq	Compute and Decompose Inequality in Education
2017-02-17	EMMLi	A Maximum Likelihood Approach to the Analysis of Modularity
2017-02-17	enigma	Client for the 'Enigma' 'API'
2017-02-17	gglogo	Geom for Logo Sequence Plots
2017-02-17	jmuOutlier	Permutation Tests for Nonparametric Statistics
2017-02-17	keyringr	Decrypt Passwords from Gnome Keyring, Windows Data Protection API and macOS Keychain
2017-02-17	marinespeed	Benchmark Data Sets and Functions for Marine Species Distribution Modelling
2017-02-17	monitoR	Acoustic Template Detection in R
2017-02-17	paramGUI	A Shiny GUI for some Parameter Estimation Examples
2017-02-17	pca3d	Three Dimensional PCA Plots
2017-02-17	PowerUpR	Power Analysis Tools for Multilevel Randomized Experiments
2017-02-17	riverplot	Sankey or Ribbon Plots
2017-02-17	RPushbullet	R Interface to the Pushbullet Messaging Service
2017-02-16	EMSaov	The Analysis of Variance with EMS
2017-02-16	exact2x2	Exact Tests and Confidence Intervals for 2x2 Tables
2017-02-16	flexCWM	Flexible Cluster-Weighted Modeling
2017-02-16	ggfortify	Data Visualization Tools for Statistical Analysis Results
2017-02-16	hqreg	Regularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression
2017-02-16	mdscore	Improved Score Tests for Generalized Linear Models
2017-02-16	opusminer	OPUS Miner Algorithm for Filtered Top-k Association Discovery
2017-02-16	papeR	A Toolbox for Writing Pretty Papers and Reports
2017-02-16	ProliferativeIndex	Calculates and Analyzes the Proliferative Index
2017-02-16	rhoR	Rho for Inter Rater Reliability
2017-02-16	ridigbio	Interface to the iDigBio Data API
2017-02-16	rope	Model Selection with FDR Control of Selected Variables
2017-02-16	spdownscale	Spatial Downscaling Using Bias Correction Approach
2017-02-16	ubeR	Interface to the Uber API
2017-02-15	condir	Computation of P Values and Bayes Factors for Conditioning Data
2017-02-15	ggalt	Extra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2'
2017-02-15	pathological	Path Manipulation Utilities
2017-02-15	velociraptr	Fossil Analysis
2017-02-15	warpMix	Mixed Effects Modeling with Warping for Functional Data Using B-Spline
2017-02-15	yesno	Ask a Custom Yes-No Question
2017-02-14	decoder	Decode Coded Variables to Plain Text and the Other Way Around
2017-02-14	dgodata	Data for the 'dgo' Package
2017-02-14	eefAnalytics	Analysing Education Trials
2017-02-14	emIRT	EM Algorithms for Estimating Item Response Theory Models
2017-02-14	MIAmaxent	Maxent Distribution Model Selection
2017-02-14	paperplanes	Distance Recordings from a Paper Plane Folding/Flying Experiment
2017-02-14	rapiclient	Dynamic OpenAPI/Swagger Client
2017-02-14	rdnb	R Interface to the 'Deutsche Nationalbibliothek (German National Library) API'
2017-02-14	schoRsch	Tools for Analyzing Factorial Experiments
2017-02-13	cope	Coverage Probability Excursion (CoPE) Sets
2017-02-13	ecosim	Toolbox for Aquatic Ecosystem Modeling
2017-02-13	LiblineaR	Linear Predictive Models Based on the 'LIBLINEAR' C/C++ Library
2017-02-13	PivotalR	A Fast, Easy-to-Use Tool for Manipulating Tables in Databases and a Wrapper of MADlib
2017-02-13	s2dverification	Set of Common Tools for Forecast Verification
2017-02-12	DClusterm	Model-Based Detection of Disease Clusters
2017-02-12	dynBiplotGUI	Full Interactive GUI for Dynamic Biplot in R
2017-02-12	fma	Data Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998)
2017-02-12	HRQoL	Health Related Quality of Life Analysis
2017-02-12	imputeMulti	Imputation Methods for Multivariate Multinomial Data
2017-02-12	purge	Purge Training Data from Models
2017-02-12	synthACS	Synthetic Microdata and Spatial MicroSimulation Modeling for ACS Data
2017-02-11	AF	Model-Based Estimation of Confounder-Adjusted Attributable Fractions
2017-02-11	CoSeg	Cosegregation Analysis and Pedigree Simulation
2017-02-11	DNAtools	Tools for Analysing Forensic Genetic DNA Data
2017-02-11	lmtest	Testing Linear Regression Models
2017-02-11	maxnet	Fitting 'Maxent' Species Distribution Models with 'glmnet'
2017-02-11	RADami	Phylogenetic Analysis of RADseq Data
2017-02-11	RGENERATE	Tools to Generate Vector Time Series
2017-02-11	RGENERATEPREC	Tools to Generate Daily-Precipitation Time Series
2017-02-11	RMAWGEN	Multi-Site Auto-Regressive Weather GENerator
2017-02-11	SetTest	Group Testing Procedures for Signal Detection and Goodness-of-Fit
2017-02-11	StVAR	Student's t Vector Autoregression (StVAR)
2017-02-10	funcy	Functional Clustering Algorithms
2017-02-09	dyn	Time Series Regression
2017-02-09	ggmosaic	Mosaic Plots in the 'ggplot2' Framework
2017-02-09	mrMLM	Multi-Locus Random-SNP-Effect Mixed Linear Model for Genome-Wide Association Studies and Linkage Analyses
2017-02-09	optbdmaeAT	Optimal Block Designs for Two-Colour cDNA Microarray Experiments
2017-02-09	RHRV	Heart Rate Variability Analysis of ECG Data
2017-02-09	RVsharing	Probability of Sharing Rare Variants among Relatives
2017-02-09	RWildbook	Interface for the 'Wildbook' Wildlife Data Management Framework
2017-02-09	seqMeta	Meta-Analysis of Region-Based Tests of Rare DNA Variants
2017-02-08	BayesCombo	Bayesian Evidence Combination
2017-02-08	EMMIXcskew	Fitting Mixtures of CFUST Distributions
2017-02-08	FuzzyStatTra	Statistical Methods for Trapezoidal Fuzzy Numbers
2017-02-08	lassopv	Nonparametric P-Value Estimation for Predictors in Lasso
2017-02-08	nse	Numerical Standard Errors Computation in R
2017-02-08	OCA	Optimal Capital Allocations
2017-02-08	tranSurv	Estimating a Survival Distribution in the Presence of Dependent Left Truncation and Right Censoring
2017-02-07	arabicStemR	Arabic Stemmer for Text Analysis
2017-02-07	GPB	Generalized Poisson Binomial Distribution
2017-02-07	pMineR	Processes Mining in Medicine
2017-02-07	SSBtools	Statistics Norway's Miscellaneous Small Tools
2017-02-06	Binarize	Binarization of One-Dimensional Data
2017-02-06	BiTrinA	Binarization and Trinarization of One-Dimensional Data
2017-02-06	cbird	Clustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization
2017-02-06	CompareTests	Correct for Verification Bias in Diagnostic Accuracy & Agreement
2017-02-06	countrycode	Convert Country Names and Country Codes
2017-02-06	event	Event History Procedures and Models
2017-02-06	gnlm	Generalized Nonlinear Regression Models
2017-02-06	growth	Multivariate Normal and Elliptically-Contoured Repeated Measurements Models
2017-02-06	LncFinder	Long Non-Coding RNA Identification Based on Features of Sequence, EIIP and Secondary Structure
2017-02-06	mdftracks	Read and Write 'MTrackJ Data Files'
2017-02-06	nlme	Linear and Nonlinear Mixed Effects Models
2017-02-06	ontologyIndex	Functions for Reading Ontologies into R
2017-02-06	QuantileGradeR	Quantile-Adjusted Restaurant Grading
2017-02-06	repeated	Non-Normal Repeated Measurements Models
2017-02-06	rmutil	Utilities for Nonlinear Regression and Repeated Measurements Models
2017-02-06	roxygen2	In-Line Documentation for R
2017-02-06	samplingDataCRT	Sampling Data Within Different Study Designs for Cluster Randomized Trials
2017-02-06	SMLoutliers	Outlier Detection Using Statistical and Machine Learning Methods
2017-02-06	stable	Probability Functions and Generalized Regression Models for Stable Distributions
2017-02-06	supportInt	Calculates Likelihood Support Intervals for Common Data Types
2017-02-06	treebase	Discovery, Access and Manipulation of 'TreeBASE' Phylogenies
2017-02-06	ZIM	Zero-Inflated Models for Count Time Series with Excess Zeros
2017-02-05	AdMit	Adaptive Mixture of Student-t Distributions
2017-02-05	mbrglm	Median Bias Reduction in Binomial-Response GLMs
2017-02-05	random	True Random Numbers using RANDOM.ORG
2017-02-05	RiskPortfolios	Computation of Risk-Based Portfolios
2017-02-05	WikipediR	A MediaWiki API Wrapper
2017-02-04	bayesGARCH	Bayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
2017-02-04	flippant	Dithionite Scramblase Assay Analysis
2017-02-04	INLABMA	Bayesian Model Averaging with INLA
2017-02-04	PeerPerformance	Luck-Corrected Peer Performance Analysis in R
2017-02-04	samplesizelogisticcasecontrol	Sample Size Calculations for Case-Control Studies
2017-02-04	superheat	A Graphical Tool for Exploring Complex Datasets Using Heatmaps
2017-02-04	tolerance	Statistical Tolerance Intervals and Regions
2017-02-03	BAMMtools	Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
2017-02-03	bigsplines	Smoothing Splines for Large Samples
2017-02-03	GroupSeq	A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
2017-02-03	OOR	Optimistic Optimization in R
2017-02-03	PST	Probabilistic Suffix Trees and Variable Length Markov Chains
2017-02-02	BigQuic	Big Quadratic Inverse Covariance Estimation
2017-02-02	e1071	Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
2017-02-02	envirem	Generation of ENVIREM Variables
2017-02-02	evolqg	Tools for Evolutionary Quantitative Genetics
2017-02-02	frailtySurv	General Semiparametric Shared Frailty Model
2017-02-02	moveWindSpeed	Estimate Wind Speeds from Bird Trajectories
2017-02-02	mpe	Multiple Primary Endpoints
2017-02-02	powerAnalysis	Power Analysis in Experimental Design
2017-02-02	readHAC	Read Acoustic HAC Format
2017-02-02	robustX	'eXtra' / 'eXperimental' Functionality for Robust Statistics
2017-02-02	SignifReg	Significant Variable Selection in Linear Regression
2017-02-02	waterfalls	Create Waterfall Charts using 'ggplot2' Simply
2017-02-01	CRF	Conditional Random Fields
2017-02-01	demoKde	Kernel Density Estimation for Demonstration Purposes
2017-02-01	eDMA	Dynamic Model Averaging with Grid Search
2017-02-01	EnsCat	Clustering of Categorical Data
2017-02-01	fontBitstreamVera	Fonts with 'Bitstream Vera Fonts' License
2017-02-01	fontquiver	Set of Installed Fonts
2017-02-01	KoulMde	Koul's Minimum Distance Estimation in Linear Regression and Autoregression Model by Coordinate Descent Algorithm
2017-02-01	lcopula	Liouville Copulas
2017-02-01	mev	Multivariate Extreme Value Distributions
2017-02-01	pdR	Threshold Model and Unit Root Tests in Panel Data
2017-02-01	penalized	L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model
2017-02-01	PopGenReport	A Simple Framework to Analyse Population and Landscape Genetic Data
2017-02-01	ShinyTester	Functions to Minimize Bonehead Moves While Working with 'shiny'
2017-02-01	sonify	Data Sonification - Turning Data into Sound
2017-02-01	ssmsn	Scale-Shape Mixtures of Skew-Normal Distributions
2017-01-31	blendedLink	A New Link Function that Blends Two Specified Link Functions
2017-01-31	choroplethrMaps	Contains Maps Used by the 'choroplethr' Package
2017-01-31	cplexAPI	R Interface to C API of IBM ILOG CPLEX
2017-01-31	edstan	Stan Models for Item Response Theory
2017-01-31	iBST	Improper Bagging Survival Tree
2017-01-31	mfe	Meta-Feature Extractor
2017-01-31	subcopem2D	Bivariate Empirical Subcopula
2017-01-30	bunchr	Analyze Bunching in a Kink or Notch Setting
2017-01-30	flood	Statistical Methods for the (Regional) Analysis of Flood Frequency
2017-01-30	gesis	R Client for GESIS Data Catalogue (DBK)
2017-01-30	gunsales	Statistical Analysis of Monthly Background Checks of Gun Purchases
2017-01-30	inspectr	Perform Basic Checks of Dataframes
2017-01-30	mdatools	Multivariate Data Analysis for Chemometrics
2017-01-30	rcss	Convex Switching Systems
2017-01-29	nzpullover	Driving Offences in New Zealand Between 2009 and 2016
2017-01-29	observer	Observe and Check your Data
2017-01-29	poio	Input/Output Functionality for "PO" and "POT" Message Translation Files
2017-01-29	rflann	Basic R Interface to the 'FLANN' C++ Library
2017-01-29	TTCA	Transcript Time Course Analysis
2017-01-29	uroot	Unit Root Tests for Seasonal Time Series
2017-01-28	alphabetr	Algorithms for High-Throughput Sequencing of Antigen-Specific T Cells
2017-01-28	fastmatch	Fast match() function
2017-01-28	gbp	A Bin Packing Problem Solver
2017-01-28	hurricaneexposure	Explore and Map County-Level Hurricane Exposure in the United States
2017-01-28	iosmooth	Functions for Smoothing with Infinite Order Flat-Top Kernels
2017-01-28	phreeqc	R Interface to Geochemical Modeling Software
2017-01-28	tracer	Slick Call Stacks
2017-01-27	bayesQR	Bayesian Quantile Regression
2017-01-27	Boruta	Wrapper Algorithm for All Relevant Feature Selection
2017-01-27	cooccurNet	Co-Occurrence Network
2017-01-27	EffectTreat	Prediction of Therapeutic Success
2017-01-27	eply	Apply a Function Over Expressions
2017-01-27	iJRF	Integrative Joint Random Forest
2017-01-27	ionicons	'Ionicons' Icon Pack
2017-01-27	landsat8	Landsat 8 Imagery Rescaled to Reflectance, Radiance and/or Temperature
2017-01-27	LumReader	TL/OSL Reader Simulator
2017-01-27	mixpack	Tools to Work with Mixture Components
2017-01-27	nycflights13	Flights that Departed NYC in 2013
2017-01-27	sparsestep	SparseStep Regression
2017-01-26	BayesPieceHazSelect	Variable Selection in a Hierarchical Bayesian Model for a Hazard Function
2017-01-26	BiSEp	Toolkit to Identify Candidate Synthetic Lethality
2017-01-26	bsplus	Adds Functionality to the R Markdown + Shiny Bootstrap Framework
2017-01-26	eclust	Environment Based Clustering for Interpretable Predictive Models in High Dimensional Data
2017-01-26	MEclustnet	Fits the Mixture of Experts Latent Position Cluster Model to Network Data
2017-01-26	nparsurv	Nonparametric Tests for Main Effects, Simple Effects and Interaction Effect in a Factorial Design with Censored Data
2017-01-26	Rcereal	C++11 Header Files for 'cereal'
2017-01-26	RKEELdata	Datasets from KEEL for it Use in RKEEL
2017-01-26	RKEELjars	Java Executable .jar Files for 'RKEEL'
2017-01-26	RRF	Regularized Random Forest
2017-01-25	fdapace	Functional Data Analysis and Empirical Dynamics
2017-01-25	glarma	Generalized Linear Autoregressive Moving Average Models
2017-01-25	goeveg	Functions for Community Data and Ordinations
2017-01-25	permutations	Permutations of a Finite Set
2017-01-24	betapart	Partitioning Beta Diversity into Turnover and Nestedness Components
2017-01-24	givitiR	The GiViTI Calibration Test and Belt
2017-01-24	mutSignatures	Decipher Mutational Signatures from Somatic Mutational Catalogs
2017-01-24	NORMA	Builds General Noise SVRs
2017-01-24	powerEQTL	Power and Sample Size Calculation for eQTL Analysis
2017-01-24	rKIN	(Kernel) Isotope Niche Estimation
2017-01-24	RSelenium	R Bindings for 'Selenium WebDriver'
2017-01-24	simpleSetup	Set Up R Source Code Files for Use on Multiple Machines
2017-01-24	xml2	Parse XML
2017-01-23	chi2x3way	Partitioning Chi-Squared and Tau Index for Three-Way Contingency Tables
2017-01-23	errint	Builds Error Intervals
2017-01-23	forcats	Tools for Working with Categorical Variables (Factors)
2017-01-23	mads	Multi-Analysis Distance Sampling
2017-01-23	MTurkR	R Client for the MTurk Requester API
2017-01-23	RNCEP	Obtain, Organize, and Visualize NCEP Weather Data
2017-01-23	skm	Selective k-Means
2017-01-23	TH.data	TH's Data Archive
2017-01-23	wdman	'Webdriver'/'Selenium' Binary Manager
2017-01-22	ALDqr	Quantile Regression Using Asymmetric Laplace Distribution
2017-01-22	ICV	Indirect Cross-Validation (ICV) for Kernel Density Estimation
2017-01-22	intrval	Relational Operators for Intervals
2017-01-22	kpcalg	Kernel PC Algorithm for Causal Structure Detection
2017-01-22	link2GI	Linking GIS, Remote Sensing and Other Command Line Tools
2017-01-22	maxlike	Model Species Distributions by Estimating the Probability of Occurrence Using Presence-Only Data
2017-01-22	metap	Meta-Analysis of Significance Values
2017-01-22	mglR	Master Gene List
2017-01-22	odds.converter	Betting Odds Conversion
2017-01-22	readability	Calculate Readability Scores
2017-01-22	SOFIA	Making Sophisticated and Aesthetical Figures in R
2017-01-22	tea	Threshold Estimation Approaches
2017-01-22	teda	An Implementation of the Typicality and Eccentricity Data Analysis Framework
2017-01-21	chords	Estimation in Respondent Driven Samples
2017-01-21	rcure	Robust Cure Models for Survival Analysis
2017-01-20	ecoval	Procedures for Ecological Assessment of Surface Waters
2017-01-20	testforDEP	Dependence Tests for Two Variables
2017-01-19	bytescircle	Statistics About Bytes Contained in a File as a Circle Plot
2017-01-19	deTestSet	Test Set for Differential Equations
2017-01-19	rUnemploymentData	Data and Functions for USA State and County Unemployment Data
2017-01-19	UncertainInterval	Uncertain Area Methods for Cut-Point Determination in Tests
2017-01-18	caesar	Encrypts and Decrypts Strings
2017-01-18	cleanr	Helps You to Code Cleaner
2017-01-18	conditions	Standardized Conditions for R
2017-01-18	confSAM	Estimates and Bounds for the False Discovery Proportion, by Permutation
2017-01-18	HH	Statistical Analysis and Data Display: Heiberger and Holland
2017-01-18	isdparser	Parse 'NOAA' Integrated Surface Data Files
2017-01-18	MADPop	MHC Allele-Based Differencing Between Populations
2017-01-18	rgho	Access WHO Global Health Observatory Data from R
2017-01-18	shotGroups	Analyze Shot Group Data
2017-01-17	bayesianETAS	Bayesian Estimation of the ETAS Model for Earthquake Occurrences
2017-01-17	cclust	Convex Clustering Methods and Clustering Indexes
2017-01-17	clusrank	Wilcoxon Rank Sum Test for Clustered Data
2017-01-17	highcharter	A Wrapper for the 'Highcharts' Library
2017-01-17	KODAMA	Knowledge Discovery by Accuracy Maximization
2017-01-17	mangoTraining	Mango Solutions Training Datasets
2017-01-17	microclass	Methods for Taxonomic Classification of Prokaryotes
2017-01-17	micropan	Microbial Pan-Genome Analysis
2017-01-17	normalr	Normalisation of Multiple Variables in Large-Scale Datasets
2017-01-17	rCAT	Conservation Assessment Tools
2017-01-17	rorutadis	Robust Ordinal Regression UTADIS
2017-01-17	tabplot	Tableplot, a Visualization of Large Datasets
2017-01-16	cumstats	Cumulative Descriptive Statistics
2017-01-16	matconv	A Code Converter from the Matlab/Octave Language to R
2017-01-16	mvoutlier	Multivariate Outlier Detection Based on Robust Methods
2017-01-16	peakRAM	Monitor the Total and Peak RAM Used by an Expression or Function
2017-01-16	radir	Inverse-Regression Estimation of Radioactive Doses
2017-01-16	waver	Calculate Fetch and Wave Energy
2017-01-15	maxmatching	Maximum Matching for General Weighted Graph
2017-01-15	mhsmm	Inference for Hidden Markov and Semi-Markov Models
2017-01-15	PoSI	Valid Post-Selection Inference for Linear LS Regression
2017-01-14	binman	A Binary Download Manager
2017-01-14	dfphase1	Phase I Control Charts (with Emphasis on Distribution-Free Methods)
2017-01-14	erah	Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics
2017-01-14	flifo	Don't Get Stuck with Stacks in R
2017-01-14	InfiniumPurify	Estimate and Account for Tumor Purity in Cancer Methylation Data Analysis
2017-01-14	isva	Independent Surrogate Variable Analysis
2017-01-14	marima	Multivariate ARIMA and ARIMA-X Analysis
2017-01-14	owmr	OpenWeatherMap API Wrapper
2017-01-14	PhyloMeasures	Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures
2017-01-14	rwars	R Client for the Star Wars API
2017-01-13	cablecuttr	A CanIStream.It API Wrapper
2017-01-13	GeneClusterNet	Gene Expression Clustering and Gene Network
2017-01-13	GMCM	Fast Estimation of Gaussian Mixture Copula Models
2017-01-13	GORCure	Fit Generalized Odds Rate Mixture Cure Model with Interval Censored Data
2017-01-13	ICGOR	Fit Generalized Odds Rate Hazards Model with Interval Censored Data
2017-01-13	IsoSpecR	The IsoSpec Algorithm
2017-01-13	microseq	Basic Biological Sequence Analysis
2017-01-13	reprex	Prepare Reproducible Example Code for Sharing
2017-01-13	SADEG	Stability Analysis in Differentially Expressed Genes
2017-01-13	sparkwarc	Load WARC Files into Apache Spark
2017-01-13	strip	Lighten your R Model Outputs
2017-01-13	TRADER	Tree Ring Analysis of Disturbance Events in R
2017-01-12	boxr	Interface for the 'Box.com API'
2017-01-12	EBrank	Empirical Bayes Ranking
2017-01-12	equate	Observed-Score Linking and Equating
2017-01-12	pxR	PC-Axis with R
2017-01-12	RChronoModel	Post-Processing of the Markov Chain Simulated by ChronoModel or Oxcal
2017-01-12	rld	Analyze and Design Repeated Low-Dose Challenge Experiments
2017-01-12	stampr	Spatial Temporal Analysis of Moving Polygons
2017-01-12	sybilSBML	SBML Integration in Package 'Sybil'
2017-01-12	zTree	Functions to Import Data from 'z-Tree' into R
2017-01-11	esmisc	Misc Functions of Eduard Szöcs
2017-01-11	goric	Generalized Order-Restricted Information Criterion for Selecting Order-Restricted (Multivariate) Linear Models
2017-01-11	NetWeaver	Graphic Presentation of Complex Genomic and Network Data Analysis
2017-01-11	ptstem	Stemming Algorithms for the Portuguese Language
2017-01-11	QRank	A Novel Quantile Regression Approach for eQTL Discovery
2017-01-11	RND	Risk Neutral Density Extraction Package
2017-01-10	ENMeval	Automated Runs and Evaluations of Ecological Niche Models
2017-01-10	hergm	Hierarchical Exponential-Family Random Graph Models
2017-01-10	icesDatras	DATRAS Trawl Database Web Services
2017-01-10	leaps	Regression Subset Selection
2017-01-10	marmap	Import, Plot and Analyze Bathymetric and Topographic Data
2017-01-10	MEGENA	Multiscale Clustering of Geometrical Network
2017-01-10	numbers	Number-Theoretic Functions
2017-01-10	qfasar	Quantitative Fatty Acid Signature Analysis in R
2017-01-10	regclass	Tools for an Introductory Class in Regression and Modeling
2017-01-10	SAVE	Bayesian Emulation, Calibration and Validation of Computer Models
2017-01-10	TAQMNGR	Manage Tick-by-Tick Transaction Data
2017-01-10	USGSstates2k	Replaced by 'states2k' – United States of America Map with the NAD 1983 Albers Projection
2017-01-10	VGAMdata	Data Supporting the 'VGAM' Package
2017-01-09	BoolFilter	Optimal Estimation of Partially Observed Boolean Dynamical Systems
2017-01-09	dismo	Species Distribution Modeling
2017-01-09	esaddle	Extended Empirical Saddlepoint Density Approximation
2017-01-09	JADE	Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria
2017-01-09	npcopTest	Non Parametric Test for Detecting Changes in the Copula
2017-01-09	npmv	Nonparametric Comparison of Multivariate Samples
2017-01-09	rangeMapper	A Platform for the Study of Macro-Ecology of Life History Traits
2017-01-09	rjsonapi	Consumer for APIs that Follow the JSON API Specification
2017-01-09	speedglm	Fitting Linear and Generalized Linear Models to Large Data Sets
2017-01-09	ssizeRNA	Sample Size Calculation for RNA-Seq Experimental Design
2017-01-09	StatMatch	Statistical Matching
2017-01-09	stormwindmodel	Model Tropical Cyclone Wind Speeds
2017-01-09	tensorBF	Bayesian Tensor Factorization
2017-01-08	epidata	Tools to Retrieve Economic Policy Institute Data Library Extracts
2017-01-08	fancycut	A Fancy Version of 'base::cut'
2017-01-08	lowmemtkmeans	Low Memory Use Trimmed K-Means
2017-01-08	monomvn	Estimation for Multivariate Normal and Student-t Data with Monotone Missingness
2017-01-08	rly	'Lex' and 'Yacc'
2017-01-08	toaster	Big Data in-Database Analytics that Scales with Teradata Aster Distributed Platform
2017-01-07	AER	Applied Econometrics with R
2017-01-07	caseMatch	Identify Similar Cases for Qualitative Case Studies
2017-01-07	clustRcompaR	Easy Interface for Clustering a Set of Documents and Exploring Group- Based Patterns
2017-01-07	depth	Nonparametric Depth Functions for Multivariate Analysis
2017-01-07	MAMSE	Calculation of Minimum Averaged Mean Squared Error (MAMSE) Weights
2017-01-07	openVA	Automated Method for Verbal Autopsy
2017-01-07	panelaggregation	Aggregate Longitudinal Survey Data
2017-01-07	sysid	System Identification in R
2017-01-07	tmle	Targeted Maximum Likelihood Estimation
2017-01-07	waffle	Create Waffle Chart Visualizations in R
2017-01-06	ahp	Analytic Hierarchy Process
2017-01-06	biogram	N-Gram Analysis of Biological Sequences
2017-01-06	BivRegBLS	Tolerance Intervals and Errors-in-Variables Regressions in Method Comparison Studies
2017-01-06	cairoDevice	Embeddable Cairo Graphics Device Driver
2017-01-06	Datasmith	Tools to Complete Euclidean Distance Matrices
2017-01-06	DFIT	Differential Functioning of Items and Tests
2017-01-06	eHOF	Extended HOF (Huisman-Olff-Fresco) Models
2017-01-06	epifit	Flexible Modelling Functions for Epidemiological Data Analysis
2017-01-06	fabCI	FAB Confidence Intervals
2017-01-06	ltxsparklines	Lightweight Sparklines for a LaTeX Document
2017-01-06	MixGHD	Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions
2017-01-06	pamctdp	Principal Axes Methods for Contingency Tables with Partition Structures on Rows and Columns
2017-01-06	Plasmidprofiler	Visualization of Plasmid Profile Results
2017-01-06	rodeo	A Code Generator for ODE-Based Models
2017-01-06	rtrie	A Simple R-Based Implementation of a Trie (A.k.a. Digital Tree/Radix Tree/Prefix Tree)
2017-01-06	semver	'Semantic Versioning V2.0.0' Parser
2017-01-06	stR	STR Decomposition
2017-01-06	stremr	Streamlined Estimation of Survival for Static, Dynamic and Stochastic Treatment and Monitoring Regimes
2017-01-05	BIOMASS	Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests
2017-01-05	crisp	Fits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way
2017-01-05	etasFLP	Mixed FLP and ML Estimation of ETAS Space-Time Point Processes
2017-01-05	FixSeqMTP	Fixed Sequence Multiple Testing Procedures
2017-01-05	gsl	Wrapper for the Gnu Scientific Library
2017-01-05	hail	Read HYDRA Rainfall Data
2017-01-05	lfda	Local Fisher Discriminant Analysis
2017-01-05	lmfor	Functions for Forest Biometrics
2017-01-05	MRCE	Multivariate Regression with Covariance Estimation
2017-01-05	ParamHelpers	Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning
2017-01-05	partDSA	Partitioning Using Deletion, Substitution, and Addition Moves
2017-01-05	requireR	R Source Code Modularizer
2017-01-05	RWinEdt	R Interface to 'WinEdt'
2017-01-05	TBSSurvival	Survival Analysis using a Transform-Both-Sides Model
2017-01-04	BayesPiecewiseICAR	Hierarchical Bayesian Model for a Hazard Function
2017-01-04	dSVA	Direct Surrogate Variable Analysis
2017-01-04	dygraphs	Interface to 'Dygraphs' Interactive Time Series Charting Library
2017-01-04	HeritSeq	Heritability of Gene Expression for Next-Generation Sequencing
2017-01-04	minimalRSD	Minimally Changed CCD and BBD
2017-01-04	Partiallyoverlapping	Partially Overlapping Samples t-Tests
2017-01-04	pwt8	Penn World Table (Version 8.x)
2017-01-04	pwt9	Penn World Table (Version 9.x)
2017-01-04	Redmonder	Microsoft(r)-Inspired Color Palettes
2017-01-04	SimPhe	Tools to Simulate Phenotype(s) with Epistatic Interaction
2017-01-04	treemap	Treemap Visualization
2017-01-04	tsdecomp	Decomposition of Time Series Data
2017-01-04	TSeriesMMA	Multiscale Multifractal Analysis of Time Series Data
2017-01-03	colr	Functions to Select and Rename Data
2017-01-03	dpcR	Digital PCR Analysis
2017-01-03	FTRLProximal	FTRL Proximal Implementation for Elastic Net Regression
2017-01-03	natserv	'NatureServe' Interface
2017-01-03	NCmisc	Miscellaneous Functions for Creating Adaptive Functions and Scripts
2017-01-03	openadds	Client to Access 'Openaddresses' Data
2017-01-03	QCAtools	Helper Functions for QCA in R
2017-01-03	reader	Suite of Functions to Flexibly Read Data from Files
2017-01-03	rebus.unicode	Unicode Extensions for the 'rebus' Package
2017-01-03	rneos	XML-RPC Interface to NEOS
2017-01-03	valuer	Pricing of Variable Annuities
2017-01-02	coxphw	Weighted Estimation in Cox Regression
2017-01-02	highlightHTML	Highlight HTML Text and Tables
2017-01-02	makedummies	Create Dummy Variables from Categorical Data
2017-01-02	pcadapt	Fast Principal Component Analysis for Outlier Detection
2017-01-01	abundant	High-Dimensional Principal Fitted Components and Abundant Regression
2017-01-01	awsjavasdk	Boilerplate R Access to the Amazon Web Services ('AWS') Java SDK
2017-01-01	googleVis	R Interface to Google Charts
2017-01-01	pbdRPC	Programming with Big Data – Remote Procedure Call
2016-12-31	assertive	Readable Check Functions to Ensure Code Integrity
2016-12-31	censys	Tools to Query the 'Censys' API
2016-12-31	factorstochvol	Bayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models
2016-12-31	futureheatwaves	Find, Characterize, and Explore Extreme Events in Climate Projections
2016-12-31	ggCompNet	Compare Timing of Network Visualizations
2016-12-31	grpregOverlap	Penalized Regression Models with Overlapping Grouped Covariates
2016-12-31	hds	Hazard Discrimination Summary
2016-12-31	likert	Analysis and Visualization Likert Items
2016-12-31	sdprisk	Measures of Risk for the Compound Poisson Risk Process with Diffusion
2016-12-30	assertive.base	A Lightweight Core of the 'assertive' Package
2016-12-30	assertive.properties	Assertions to Check Properties of Variables
2016-12-30	assertive.reflection	Assertions for Checking the State of R
2016-12-30	assertive.sets	Assertions to Check Properties of Sets
2016-12-30	assertive.types	Assertions to Check Types of Variables
2016-12-30	bootruin	A Bootstrap Test for the Probability of Ruin in the Classical Risk Process
2016-12-30	bossMaps	Convert Binary Species Range Maps into Continuous Surfaces Based on Distance to Range Edge
2016-12-30	errorlocate	Locate Errors with Validation Rules
2016-12-30	finiteruinprob	Computation of the Probability of Ruin Within a Finite Time Horizon
2016-12-30	GCPM	Generalized Credit Portfolio Model
2016-12-30	ggplot2	Create Elegant Data Visualisations Using the Grammar of Graphics
2016-12-30	GSE	Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
2016-12-30	gsheet	Download Google Sheets Using Just the URL
2016-12-30	HDtest	High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series
2016-12-30	list	Statistical Methods for the Item Count Technique and List Experiment
2016-12-30	RcppMLPACK	'Rcpp' Integration for the 'MLPACK' Library
2016-12-30	uniah	Unimodal Additive Hazards Model
2016-12-29	AcceptanceSampling	Creation and Evaluation of Acceptance Sampling Plans
2016-12-29	fortunes	R Fortunes
2016-12-29	htmltab	Assemble Data Frames from HTML Tables
2016-12-29	ludic	Linkage Using Diagnosis Codes
2016-12-28	attrCUSUM	Tools for Attribute VSI CUSUM Control Chart
2016-12-28	confreq	Configural Frequencies Analysis Using Log-Linear Modeling
2016-12-28	nplr	N-Parameter Logistic Regression
2016-12-27	acrt	Autocorrelation Robust Testing
2016-12-27	ashr	Methods for Adaptive Shrinkage, using Empirical Bayes
2016-12-27	bayesloglin	Bayesian Analysis of Contingency Table Data
2016-12-27	Bchron	Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
2016-12-27	Bclim	Bayesian Palaeoclimate Reconstruction from Pollen Data
2016-12-27	cvequality	Tests for the Equality of Coefficients of Variation from Multiple Groups
2016-12-27	DStree	Recursive Partitioning for Discrete-Time Survival Trees
2016-12-27	GMD	Generalized Minimum Distance of distributions
2016-12-27	IRTpp	Estimating IRT Parameters using the IRT Methodology
2016-12-27	KTensorGraphs	Co-Tucker3 Analysis of Two Sequences of Matrices
2016-12-27	lakemorpho	Lake Morphometry Metrics in R
2016-12-27	mixture	Mixture Models for Clustering and Classification
2016-12-27	mRm	An R Package for Conditional Maximum Likelihood Estimation in Mixed Rasch Models
2016-12-27	restrictedMVN	Multivariate Normal Restricted by Affine Constraints
2016-12-27	rFTRLProximal	FTRL-Proximal Algorithm
2016-12-27	rpubchem	An Interface to the PubChem Collection
2016-12-27	SCBmeanfd	Simultaneous Confidence Bands for the Mean of Functional Data
2016-12-27	spark.sas7bdat	Read in 'SAS' Data ('.sas7bdat' Files) into 'Apache Spark'
2016-12-27	UStatBookABSC	A Companion Package to the Book "U-Statistics, M-Estimation and Resampling"
2016-12-26	DISTRIB	Four Essential Functions for Statistical Distributions Analysis: A New Functional Approach
2016-12-26	factorcpt	Simultaneous Change-Point and Factor Analysis
2016-12-26	GLDEX	Fitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods
2016-12-26	tilting	Variable Selection via Tilted Correlation Screening Algorithm
2016-12-26	utf8latex	Importing, Exporting and Converting Between Datasets and LaTeX
2016-12-24	findviews	A View Generator for Multidimensional Data
2016-12-24	ggguitar	Utilities for Creating Guitar Tablature
2016-12-24	HDoutliers	Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers
2016-12-24	rnrfa	UK National River Flow Archive Data from R
2016-12-24	samplesize	Sample Size Calculation for Various t-Tests and Wilcoxon-Test
2016-12-23	finch	Parse Darwin Core Files
2016-12-23	gemtc	Network Meta-Analysis Using Bayesian Methods
2016-12-23	hitandrun	"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
2016-12-23	quint	Qualitative Interaction Trees
2016-12-23	Rarity	Calculation of Rarity Indices for Species and Assemblages of Species
2016-12-23	ROI.models.netlib	'ROI' Optimization Problems Based on 'NETLIB-LP'
2016-12-23	smaa	Stochastic Multi-Criteria Acceptability Analysis
2016-12-23	stepPenal	Stepwise Forward Variable Selection in Penalized Regression
2016-12-23	swCRTdesign	Stepped Wedge Cluster Randomized Trial (SW CRT) Design
2016-12-23	ztype	Run a Ztype Game Loaded with R Functions
2016-12-22	concreg	Concordance Regression
2016-12-22	coxphf	Cox Regression with Firth's Penalized Likelihood
2016-12-22	heritability	Marker-Based Estimation of Heritability Using Individual Plant or Plot Data
2016-12-22	lavaan.survey	Complex Survey Structural Equation Modeling (SEM)
2016-12-22	readJDX	Import Data in the JCAMP-DX Format
2016-12-22	rowr	Row-Based Functions for R Objects
2016-12-22	sampling	Survey Sampling
2016-12-21	condSURV	Estimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data
2016-12-21	crosstalk	Inter-Widget Interactivity for HTML Widgets
2016-12-21	GPrank	Gaussian Process Ranking of Multiple Time Series
2016-12-21	growcurves	Bayesian Semi and Nonparametric Growth Curve Models that Additionally Include Multiple Membership Random Effects
2016-12-21	ms.sev	Package for Calculation of ARMSS, Local MSSS and Global MSSS
2016-12-21	pgee.mixed	Penalized Generalized Estimating Equations for Bivariate Mixed Outcomes
2016-12-21	PLMIX	Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings
2016-12-21	rocNIT	Non-Inferiority Test for Paired ROC Curves
2016-12-21	SpaTimeClus	Model-Based Clustering of Spatio-Temporal Data
2016-12-20	akima	Interpolation of Irregularly and Regularly Spaced Data
2016-12-20	aws.ses	AWS SES Client Package
2016-12-20	HDclassif	High Dimensional Supervised Classification and Clustering
2016-12-20	ICSOutlier	Outlier Detection Using Invariant Coordinate Selection
2016-12-20	OData	R Helper for OData Web Services
2016-12-20	PredictTestbench	Test Bench for Comparison of Data Prediction Models
2016-12-20	radarchart	Radar Chart from 'Chart.js'
2016-12-20	RcmdrPlugin.KMggplot2	R Commander Plug-in for Data Visualization with 'ggplot2'
2016-12-20	scdhlm	Estimating Hierarchical Linear Models for Single-Case Designs
2016-12-20	SPPcomb	Combining Different Spatial Datasets in Cancer Risk Estimation
2016-12-20	stmgui	Shiny Application for Creating STM Models
2016-12-19	bcRep	Advanced Analysis of B Cell Receptor Repertoire Data
2016-12-19	DEoptim	Global Optimization by Differential Evolution
2016-12-19	logistf	Firth's Bias-Reduced Logistic Regression
2016-12-19	pipeliner	Machine Learning Pipelines for R
2016-12-19	pmclust	Parallel Model-Based Clustering using Expectation-Gathering-Maximization Algorithm for Finite Mixture Gaussian Model
2016-12-19	PPtreeViz	Projection Pursuit Classification Tree Visualization
2016-12-19	qwraps2	Quick Wraps 2
2016-12-19	selectr	Translate CSS Selectors to XPath Expressions
2016-12-18	DirectStandardisation	Adjusted Means and Proportions by Direct Standardisation
2016-12-18	longurl	Expand Short URLs
2016-12-18	magicfor	Magic Functions to Obtain Results from for Loops
2016-12-18	pls	Partial Least Squares and Principal Component Regression
2016-12-18	rPref	Database Preferences and Skyline Computation
2016-12-18	tigerstats	R Functions for Elementary Statistics
2016-12-17	ACTCD	Asymptotic Classification Theory for Cognitive Diagnosis
2016-12-17	MTDrh	Mass Transportation Distance Rank Histogram
2016-12-17	MWRidge	Two Stage Moving-Window Ridge Method for Prediction and Estimation
2016-12-17	opticut	Likelihood Based Optimal Partitioning for Indicator Species Analysis
2016-12-17	PepSAVIms	PepSAVI-MS Data Analysis
2016-12-17	PGM2	Nested Resolvable Designs and their Associated Uniform Designs
2016-12-17	ramify	Additional Matrix Functionality
2016-12-17	textutils	Utilities for Handling Strings and Text
2016-12-17	touch	Tools of Utilization and Cost in Healthcare
2016-12-16	acc	Exploring Accelerometer Data
2016-12-16	binseqtest	Exact Binary Sequential Designs and Analysis
2016-12-16	bivrp	Bivariate Residual Plots with Simulation Polygons
2016-12-16	cowsay	Messages, Warnings, Strings with Ascii Animals
2016-12-16	Ecdat	Data Sets for Econometrics
2016-12-16	FinancialMath	Financial Mathematics for Actuaries
2016-12-16	multiDimBio	Multivariate Analysis and Visualization for Biological Data
2016-12-16	pdfsearch	Search Tools for PDF Files
2016-12-16	polyfreqs	Bayesian Population Genomics in Autopolyploids
2016-12-16	rncl	An Interface to the Nexus Class Library
2016-12-16	sjdbc	JDBC Driver Interface
2016-12-16	tripack	Triangulation of Irregularly Spaced Data
2016-12-15	coprimary	Sample Size Calculation for Two Primary Time-to-Event Endpoints in Clinical Trials
2016-12-15	KoNLP	Korean NLP Package
2016-12-15	MvBinary	Modelling Multivariate Binary Data with Blocks of Specific One-Factor Distribution
2016-12-15	NScluster	Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models
2016-12-15	redland	RDF Library Bindings in R
2016-12-15	skellam	Densities and Sampling for the Skellam Distribution
2016-12-15	tibbrConnector	R Interface to TIBCO 'tibbr'
2016-12-15	tmvnsim	Truncated Multivariate Normal Simulation
2016-12-14	activpalProcessing	Process activPAL Events Files
2016-12-14	BTYDplus	Probabilistic Models for Assessing and Predicting your Customer Base
2016-12-14	ca	Simple, Multiple and Joint Correspondence Analysis
2016-12-14	ClustVarLV	Clustering of Variables Around Latent Variables
2016-12-14	colorspace	Color Space Manipulation
2016-12-14	datasets.load	Interface for Loading Datasets
2016-12-14	FLSSS	Multi-Threaded Multidimensional Fixed Size Subset Sum Solver and Extension to General-Purpose Knapsack Problem
2016-12-14	progress	Terminal Progress Bars
2016-12-14	VizOR	Graphical Visualization Tools for Complex Observational Data with Focus on Health Sciences
2016-12-14	wux	Wegener Center Climate Uncertainty Explorer
2016-12-13	admixturegraph	Admixture Graph Manipulation and Fitting
2016-12-13	bnstruct	Bayesian Network Structure Learning from Data with Missing Values
2016-12-13	bpp	Computations Around Bayesian Predictive Power
2016-12-13	DIFtree	Item Focused Trees for the Identification of Items in Differential Item Functioning
2016-12-13	fanc	Penalized Likelihood Factor Analysis via Nonconvex Penalty
2016-12-13	GrapheR	A Multi-Platform GUI for Drawing Customizable Graphs in R
2016-12-13	MODISSnow	Provides a Function to Download MODIS Snow Cover
2016-12-13	nhanesA	NHANES Data Retrieval
2016-12-13	patchSynctex	Communication Between Editor and Viewer for Literate Programs
2016-12-13	poptrend	Estimate Smooth and Linear Trends from Population Count Survey Data
2016-12-13	prclust	Penalized Regression-Based Clustering Method
2016-12-13	scatterD3	D3 JavaScript Scatterplot from R
2016-12-13	SocialMediaMineR	A Social Media Search and Analytic Tool
2016-12-13	SoyNAM	Soybean Nested Association Mapping Dataset
2016-12-13	sparkTable	Sparklines and Graphical Tables for TeX and HTML
2016-12-12	FRAPO	Financial Risk Modelling and Portfolio Optimisation with R
2016-12-12	ggenealogy	Visualization Tools for Genealogical Data
2016-12-12	merTools	Tools for Analyzing Mixed Effect Regression Models
2016-12-12	pasta	Noodlyfied Pasting of Strings
2016-12-12	PopED	Population (and Individual) Optimal Experimental Design
2016-12-12	tigreBrowserWriter	'tigreBrowser' Database Writer
2016-12-11	ampd	An Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals
2016-12-11	CollapsABEL	Generalized CDH (GCDH) Analysis
2016-12-11	DNLC	Differential Network Local Consistency Analysis
2016-12-11	errorizer	Function Errorizer
2016-12-11	fdq	Forest Data Quality
2016-12-11	pointRes	Analyzing Pointer Years and Components of Resilience
2016-12-11	reinstallr	Search and Install Missing Packages
2016-12-10	desiR	Desirability Functions for Ranking, Selecting, and Integrating Data
2016-12-10	rtrends	Analyze Download Logs from the CRAN RStudio Mirror
2016-12-09	CuCubes	MultiDimensional Feature Selection (MDFS)
2016-12-09	GLMaSPU	An Adaptive Test on High Dimensional Parameters in Generalized Linear Models
2016-12-09	INSPIRE	Inferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets
2016-12-09	isocir	Isotonic Inference for Circular Data
2016-12-09	magree	Implements the O'Connell-Dobson-Schouten Estimators of Agreement for Multiple Observers
2016-12-09	MixedPoisson	Mixed Poisson Models
2016-12-09	QCEWAS	Fast and Easy Quality Control of EWAS Results Files
2016-12-09	RcppNumerical	'Rcpp' Integration for Numerical Computing Libraries
2016-12-09	rrr	Reduced-Rank Regression
2016-12-09	ShapeChange	Change-Point Estimation using Shape-Restricted Splines
2016-12-09	SOR	Estimation using Sequential Offsetted Regression
2016-12-08	aws.polly	Client for AWS Polly
2016-12-08	ChannelAttribution	Markov Model for the Online Multi-Channel Attribution Problem
2016-12-08	coda	Output Analysis and Diagnostics for MCMC
2016-12-08	geomnet	Network Visualization in the 'ggplot2' Framework
2016-12-08	gofMC	Goodness of Fit Noise Analysis Using Monte Carlo Techniques
2016-12-08	GreedyExperimentalDesign	Greedy Experimental Design Construction
2016-12-08	icpsrdata	Reproducible Data Retrieval from the ICPSR Archive
2016-12-08	internetarchive	An API Client for the Internet Archive
2016-12-08	micromapST	Linked Micromap Plots for General U. S. and Other Geographic Areas
2016-12-08	NLPutils	Natural Language Processing Utilities
2016-12-08	oz	Plot the Australian Coastline and States
2016-12-08	piecewiseSEM	Piecewise Structural Equation Modeling
2016-12-08	polynom	A Collection of Functions to Implement a Class for Univariate Polynomial Manipulations
2016-12-08	Radviz	Project Multidimensional Data in 2D Space
2016-12-08	snowboot	Bootstrap Methods for Network Inference
2016-12-07	cellWise	Analyzing Data with Cellwise Outliers
2016-12-07	DCM	Data Converter Module
2016-12-07	madsim	A Flexible Microarray Data Simulation Model
2016-12-07	originr	Fetch Species Origin Data from the Web
2016-12-07	seeclickfixr	Access Data from the SeeClickFix Web API
2016-12-07	teigen	Model-Based Clustering and Classification with the Multivariate t Distribution
2016-12-06	Branching	Simulation and Estimation for Branching Processes
2016-12-06	bvpSolve	Solvers for Boundary Value Problems of Differential Equations
2016-12-06	icesVocab	ICES Vocabularies Database Web Services
2016-12-06	marked	Mark-Recapture Analysis for Survival and Abundance Estimation
2016-12-06	rccmisc	Miscellaneous R Functions for Swedish Regional Cancer Centers
2016-12-06	robustsae	Robust Bayesian Small Area Estimation
2016-12-06	rootSolve	Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations
2016-12-06	SafeQuant	A Toolbox for the Analysis of Proteomics Data
2016-12-05	AmmoniaConcentration	Un-Ionized Ammonia Concentration
2016-12-05	anchors	Statistical analysis of surveys with anchoring vignettes
2016-12-05	aop	Adverse Outcome Pathway Analysis
2016-12-05	atsd	Support Querying Axibase Time-Series Database
2016-12-05	bannerCommenter	Make Banner Comments with a Consistent Format
2016-12-05	bridger2	Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
2016-12-05	Causata	Analysis utilities for binary classification and Causata users
2016-12-05	cem	Coarsened Exact Matching
2016-12-05	cplm	Compound Poisson Linear Models
2016-12-05	diptest	Hartigan's Dip Test Statistic for Unimodality - Corrected
2016-12-05	DrBats	Data Representation: Bayesian Approach That's Sparse
2016-12-05	easypackages	Easy Loading and Installing of Packages
2016-12-05	ezec	Easy Interface to Effective Concentration Calculations
2016-12-05	FAwR	Functions and Datasets for "Forest Analytics with R"
2016-12-05	flows	Flow Selection and Analysis
2016-12-05	gafit	Genetic Algorithm for Curve Fitting
2016-12-05	gapmap	Functions for Drawing Gapped Cluster Heatmap with ggplot2
2016-12-05	geeM	Solve Generalized Estimating Equations
2016-12-05	gender	Predict Gender from Names Using Historical Data
2016-12-05	ggparallel	Variations of Parallel Coordinate Plots for Categorical Data
2016-12-05	gld	Estimation and Use of the Generalised (Tukey) Lambda Distribution
2016-12-05	hsphase	Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
2016-12-05	IHSEP	Inhomogeneous Self-Exciting Process
2016-12-05	intergraph	Coercion Routines for Network Data Objects
2016-12-05	labstats	Data Sets for the Book "Experimental Design for Laboratory Biologists"
2016-12-05	melviewr	View and Classify MELODIC Output for ICA+FIX
2016-12-05	MultiBD	Multivariate Birth-Death Processes
2016-12-05	mvngGrAd	Moving Grid Adjustment in Plant Breeding Field Trials
2016-12-05	mvtboost	Tree Boosting for Multivariate Outcomes
2016-12-05	NEArender	Network Enrichment Analysis
2016-12-05	networkreporting	Tools for using Network Reporting Estimators
2016-12-05	nucim	Nucleome Imaging Toolbox
2016-12-05	optigrab	Command-Line Parsing for an R World
2016-12-05	PANDA	Preferential Attachment Based Common Neighbor Distribution Derived Functional Associations
2016-12-05	Perc	Using Percolation and Conductance to Find Information Flow Certainty in a Direct Network
2016-12-05	pmc	Phylogenetic Monte Carlo
2016-12-05	popprxl	Read GenAlEx Files Directly from Excel
2016-12-05	PSAboot	Bootstrapping for Propensity Score Analysis
2016-12-05	pvar	Calculation and Application of p-Variation
2016-12-05	pxweb	R Interface to the PX-Web/PC-Axis API
2016-12-05	rfordummies	Code Examples to Accompany the Book "R for Dummies"
2016-12-05	rstiefel	Random orthonormal matrix generation on the Stiefel manifold
2016-12-05	rt3	Tic-Tac-Toe Package for R
2016-12-05	sla	Two-Group Straight Line ANCOVA
2016-12-05	tswge	Applied Time Series Analysis
2016-12-05	urlshorteneR	R Wrapper for the 'Bit.ly', 'Goo.gl' and 'Is.gd' URL Shortening Services
2016-12-05	Wats	Wrap Around Time Series Graphics
2016-12-05	wgsea	Wilcoxon based gene set enrichment analysis
2016-12-04	cmaesr	Covariance Matrix Adaptation Evolution Strategy
2016-12-04	lazyData	A LazyData Facility
2016-12-04	mstate	Data Preparation, Estimation and Prediction in Multi-State Models
2016-12-04	phuassess	Proportional Habitat Use Assessment
2016-12-04	SISIR	Sparse Interval Sliced Inverse Regression
2016-12-03	ggiraphExtra	Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
2016-12-03	rhnerm	Random Heteroscedastic Nested Error Regression
2016-12-03	subscore	Computing Subscores in Classical Test Theory and Item Response Theory
2016-12-02	blockTools	Block, Assign, and Diagnose Potential Interference in Randomized Experiments
2016-12-02	ClimDown	Climate Downscaling Library for Daily Climate Model Output
2016-12-02	cshapes	The CShapes Dataset and Utilities
2016-12-02	pinfsc50	Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis'
2016-12-02	vkR	Access to VK API via R
2016-12-01	apc	Age-Period-Cohort Analysis
2016-12-01	deconvolveR	Empirical Bayes Estimation Strategies
2016-12-01	freqdist	Frequency Distribution
2016-12-01	gbs2ploidy	Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data
2016-12-01	gRc	Inference in Graphical Gaussian Models with Edge and Vertex Symmetries
2016-12-01	mipfp	Multidimensional Iterative Proportional Fitting and Alternative Models
2016-12-01	MVN	Multivariate Normality Tests
2016-12-01	rxSeq	Combined Total and Allele Specific Reads Sequencing Study
2016-12-01	TP.idm	Estimation of Transition Probabilities for the Illness-Death Model
2016-11-30	camsRad	Client for CAMS Radiation Service
2016-11-30	eMLEloglin	Fitting log-Linear Models in Sparse Contingency Tables
2016-11-30	mclcar	Estimating Conditional Auto-Regressive (CAR) Models using Monte Carlo Likelihood Methods
2016-11-30	MotilityLab	Quantitative Analysis of Motion
2016-11-30	ramcmc	Robust Adaptive Metropolis Algorithm
2016-11-29	effectFusion	Bayesian Effect Fusion for Categorical Predictors
2016-11-29	listdtr	List-Based Rules for Dynamic Treatment Regimes
2016-11-29	optR	Optimization Toolbox for Solving Linear Systems
2016-11-29	Przewodnik	Datasets and Functions Used in the Book 'Przewodnik po Pakiecie R'
2016-11-29	Rmalschains	Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R
2016-11-29	RNHANES	Facilitates Analysis of CDC NHANES Data
2016-11-29	testassay	A Hypothesis Testing Framework for Validating an Assay for Precision
2016-11-29	tsdisagg2	Time Series Disaggregation
2016-11-28	bc3net	Gene Regulatory Network Inference with Bc3net
2016-11-28	CTM	A Text Mining Toolkit for Chinese Document
2016-11-28	CVD	Color Vision Deficiencies
2016-11-28	ggforce	Accelerating 'ggplot2'
2016-11-28	LSAfun	Applied Latent Semantic Analysis (LSA) Functions
2016-11-28	nice	Get or Set UNIX Niceness
2016-11-28	rtrim	Trends and Indices for Monitoring Data
2016-11-28	SACCR	SA Counterparty Credit Risk under Basel III
2016-11-28	textreuse	Detect Text Reuse and Document Similarity
2016-11-27	arm	Data Analysis Using Regression and Multilevel/Hierarchical Models
2016-11-27	GeomComb	(Geometric) Forecast Combination Methods
2016-11-27	notifyme	Send Alerts to your Cellphone and Phillips Hue Lights
2016-11-27	omics	'–omics' Data Analysis Toolbox
2016-11-27	readODS	Read and Write ODS Files
2016-11-26	DALY	The DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R
2016-11-26	FITSio	FITS (Flexible Image Transport System) Utilities
2016-11-26	shinyLP	Bootstrap Landing Home Pages for Shiny Applications
2016-11-26	xVA	Calculates Credit Risk Valuation Adjustments
2016-11-25	aslib	Interface to the Algorithm Selection Benchmark Library
2016-11-25	dynetNLAResistance	Resisting Neighbor Label Attack in a Dynamic Network
2016-11-25	HLSM	Hierarchical Latent Space Network Model
2016-11-25	miscTools	Miscellaneous Tools and Utilities
2016-11-25	multicool	Permutations of Multisets in Cool-Lex Order
2016-11-25	NeuralNetTools	Visualization and Analysis Tools for Neural Networks
2016-11-25	rDEA	Robust Data Envelopment Analysis (DEA) for R
2016-11-25	rIsing	High-Dimensional Ising Model Selection
2016-11-25	rlo	Utilities for Writing to 'LibreOffice Writer' Documents
2016-11-25	survAWKMT2	Two-Sample Tests Based on Differences of Kaplan-Meier Curves
2016-11-24	AnalyzeTS	Analyze Fuzzy Time Series
2016-11-24	bayesreg	Bayesian Regression Models with Continuous Shrinkage Priors
2016-11-24	multiwave	Estimation of Multivariate Long-Memory Models Parameters
2016-11-24	oai	General Purpose 'Oai-PMH' Services Client
2016-11-24	quarrint	Interaction Prediction Between Groundwater and Quarry Extension Using Discrete Choice Models and Artificial Neural Networks
2016-11-24	RcppExamples	Examples using 'Rcpp' to Interface R and C++
2016-11-24	RDStreeboot	RDS Tree Bootstrap Method
2016-11-23	CombinS	Construction Methods of some Series of PBIB Designs
2016-11-23	epistasis	Detecting Epistatic Selection with Partially Observed Genotype Data
2016-11-23	FBFsearch	Algorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors
2016-11-23	gridsampler	A Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies
2016-11-23	ph2mult	Phase II Clinical Trial Design for Multinomial Endpoints
2016-11-23	pumilioR	Pumilio in R
2016-11-23	pushoverr	Send Push Notifications using Pushover
2016-11-23	SpaCCr	Spatial Convex Clustering
2016-11-23	strat	An Implementation of the Stratification Index
2016-11-23	survMisc	Miscellaneous Functions for Survival Data
2016-11-22	bayesDem	Graphical User Interface for bayesTFR, bayesLife and bayesPop
2016-11-22	difR	Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
2016-11-22	ffstream	Forgetting Factor Methods for Change Detection in Streaming Data
2016-11-22	lmridge	Linear Ridge Regression with Ridge Penalty and Ridge Statistics
2016-11-22	mbclusterwise	Clusterwise Multiblock Analyses
2016-11-22	MCAvariants	Multiple Correspondence Analysis Variants
2016-11-22	ockc	Order Constrained Solutions in k-Means Clustering
2016-11-22	ParallelTree	Parallel Tree
2016-11-22	POT	Generalized Pareto Distribution and Peaks Over Threshold
2016-11-22	Rdtq	Density Tracking by Quadrature
2016-11-22	SeleMix	Selective Editing via Mixture Models
2016-11-21	BoolNet	Construction, Simulation and Analysis of Boolean Networks
2016-11-21	ebdbNet	Empirical Bayes Estimation of Dynamic Bayesian Networks
2016-11-21	gamlss.tr	Generating and Fitting Truncated ‘gamlss.family’ Distributions
2016-11-21	githubinstall	A Helpful Way to Install R Packages Hosted on GitHub
2016-11-21	HAC	Estimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC)
2016-11-21	NFP	Network Fingerprint Framework in R
2016-11-21	pstest	Specification Tests for Parametric Propensity Score Models
2016-11-21	relabeLoadings	Relabel Loadings from MCMC Output for Confirmatory Factor Analysis
2016-11-21	weco	Western Electric Company Rules (WECO) for Shewhart Control Chart
2016-11-20	ADCT	Adaptive Design in Clinical Trials
2016-11-20	eRm	Extended Rasch Modeling
2016-11-20	grpSLOPE	Group Sorted L1 Penalized Estimation
2016-11-20	interplot	Plot the Effects of Variables in Interaction Terms
2016-11-20	minpack.lm	R Interface to the Levenberg-Marquardt Nonlinear Least-Squares Algorithm Found in MINPACK, Plus Support for Bounds
2016-11-20	mpmi	Mixed-Pair Mutual Information Estimators
2016-11-20	rsnps	Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web
2016-11-20	Trading	Trades, Curves, Rating Tables, Add-on Tables, CSAs
2016-11-19	climbeR	Calculate Average Minimal Depth of a Maximal Subtree for 'ranger' Package Forests
2016-11-19	DEoptimR	Differential Evolution Optimization in Pure R
2016-11-19	estimability	Tools for Assessing Estimability of Linear Predictions
2016-11-19	nhstplot	Plot Null Hypothesis Significance Tests
2016-11-19	ordinalgmifs	Ordinal Regression for High-Dimensional Data
2016-11-18	BCEA	Bayesian Cost Effectiveness Analysis
2016-11-18	meboot	Maximum Entropy Bootstrap for Time Series
2016-11-18	rehh	Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
2016-11-17	DGCA	Differential Gene Correlation Analysis
2016-11-17	gwfa	Geographically Weighted Fractal Analysis
2016-11-17	hit	Hierarchical Inference Testing
2016-11-17	hydrostats	Hydrologic Indices for Daily Time Series Data
2016-11-17	KOGMWU	Functional Summary and Meta-Analysis of Gene Expression Data
2016-11-17	NegBinBetaBinreg	Negative Binomial and Beta Binomial Bayesian Regression Models
2016-11-17	tinsel	Transform Functions using Decorators
2016-11-17	udunits2	Udunits-2 Bindings for R
2016-11-16	fauxpas	HTTP Error Helpers
2016-11-16	ggstance	Horizontal 'ggplot2' Components
2016-11-16	ibmcraftr	Toolkits to Develop Individual-Based Models in Infectious Disease
2016-11-16	manhattanly	Interactive Q-Q and Manhattan Plots Using 'plotly.js'
2016-11-16	NetRep	Permutation Testing Network Module Preservation Across Datasets
2016-11-15	apdesign	An Implementation of the Additive Polynomial Design Matrix
2016-11-15	colormap	Color Palettes using Colormaps Node Module
2016-11-15	fdrci	Permutation-Based FDR Point and Confidence Interval Estimation
2016-11-15	MSBVAR	Markov-Switching, Bayesian, Vector Autoregression Models
2016-11-15	WEE	Weighted Estimated Equation (WEE) Approaches in Genetic Case-Control Studies
2016-11-14	fda.usc	Functional Data Analysis and Utilities for Statistical Computing
2016-11-14	fiftystater	Map Data to Visualize the Fifty U.S. States with Alaska and Hawaii Insets
2016-11-14	httpcode	'HTTP' Status Code Helper
2016-11-14	localgauss	Estimating Local Gaussian Parameters
2016-11-14	locits	Test of Stationarity and Localized Autocovariance
2016-11-13	bindr	Parametrized Active Bindings
2016-11-13	miscFuncs	Miscellaneous Useful Functions Including LaTeX Tables, Kalman Filtering and Development Tools
2016-11-13	peacots	Periodogram Peaks in Correlated Time Series
2016-11-13	PhyInformR	Rapid Calculation of Phylogenetic Information Content
2016-11-13	pkgKitten	Create Simple Packages Which Do not Upset R Package Checks
2016-11-13	plotluck	'ggplot2' Version of "I'm Feeling Lucky!"
2016-11-13	refund.shiny	Interactive Plotting for Functional Data Analyses
2016-11-12	CSclone	Bayesian Nonparametric Modeling in R
2016-11-12	flock	Process Synchronization Using File Locks
2016-11-12	ICS	Tools for Exploring Multivariate Data via ICS/ICA
2016-11-12	iNEXT	Interpolation and Extrapolation for Species Diversity
2016-11-12	jointNmix	Joint N-Mixture Models for Site-Associated Species
2016-11-12	LEANR	Finds "Local Subnetworks" Within an Interaction Network which Show Enrichment for Differentially Expressed Genes
2016-11-12	Planesmuestra	Functions for Calculating Dodge Romig, MIL STD 105E and MIL STD 414 Acceptance Sampling Plan
2016-11-12	ptest	Periodicity Tests in Short Time Series
2016-11-12	qiitr	R Interface to Qiita API
2016-11-12	quantification	Quantification of Qualitative Survey Data
2016-11-12	RcmdrPlugin.TeachingDemos	Rcmdr Teaching Demos Plug-in
2016-11-12	RECA	Relevant Component Analysis for Supervised Distance Metric Learning
2016-11-12	sparkline	'jQuery' Sparkline 'htmlwidget'
2016-11-12	XRSCC	Statistical Quality Control Simulation
2016-11-11	medfate	Mediterranean Forest Simulation
2016-11-11	obAnalytics	Limit Order Book Analytics
2016-11-11	OrthoPanels	Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects
2016-11-11	rrcovHD	Robust Multivariate Methods for High Dimensional Data
2016-11-10	arrApply	Apply a Function to a Margin of an Array
2016-11-10	cthreshER	Continuous Threshold Expectile Regression
2016-11-10	dynOmics	Fast Fourier Transform to Identify Associations Between Time Course Omics Data
2016-11-10	EMbC	Expectation-Maximization Binary Clustering
2016-11-10	exteriorMatch	Constructs the Exterior Match from Two Matched Control Groups
2016-11-10	metaplus	Robust Meta-Analysis and Meta-Regression
2016-11-10	R.devices	Unified Handling of Graphics Devices
2016-11-10	RSIP	Remote Sensing and Image Processing
2016-11-10	zoocat	'zoo' Objects with Column Attributes
2016-11-09	abn	Modelling Multivariate Data with Additive Bayesian Networks
2016-11-09	feather	R Bindings to the Feather 'API'
2016-11-09	flam	Fits Piecewise Constant Models with Data-Adaptive Knots
2016-11-09	fungible	Fungible Coefficients and Monte Carlo Functions
2016-11-09	HARtools	Read HTTP Archive ('HAR') Data
2016-11-09	MCMC.qpcr	Bayesian Analysis of qRT-PCR Data
2016-11-08	drgee	Doubly Robust Generalized Estimating Equations
2016-11-08	horseshoe	Implementation of the Horseshoe Prior
2016-11-08	mnlogit	Multinomial Logit Model
2016-11-08	msaFACE	Moving Subset Analysis FACE
2016-11-08	MSGLasso	Multivariate Sparse Group Lasso for the Multivariate Multiple Linear Regression with an Arbitrary Group Structure
2016-11-08	pirate	Generated Effect Modifier
2016-11-08	rehh.data	Data Only: Searching for Footprints of Selection using Haplotype Homozygosity Based Tests
2016-11-08	SWMPr	Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2016-11-08	wvtool	Image Tools for Automated Wood Identification
2016-11-07	CollocInfer	Collocation Inference for Dynamic Systems
2016-11-07	diffrprojectswidget	Visualization for 'diffrprojects'
2016-11-07	OptimalDesign	Algorithms for D-, A-, and IV-Optimal Designs
2016-11-07	regtools	Regression Tools
2016-11-07	Rga4gh	An Interface to the GA4GH API
2016-11-07	SparseTSCGM	Sparse Time Series Chain Graphical Models
2016-11-07	sparsevar	A Package for Sparse VAR/VECM Estimation
2016-11-07	starmie	Population Structure Model Inference and Visualisation
2016-11-07	varband	Variable Banding of Large Precision Matrices
2016-11-06	DetMCD	Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
2016-11-06	diffrprojects	Projects for Text Version Comparison and Analytics in R
2016-11-06	pch	Piecewise Constant Hazards Models for Censored and Truncated Data
2016-11-05	dams	Dams in the United States from the National Inventory of Dams (NID)
2016-11-05	ei	Ecological Inference
2016-11-05	gettz	Get the Timezone Information
2016-11-05	varSel	Sequential Forward Floating Selection using Jeffries-Matusita Distance
2016-11-04	ordcrm	Likelihood-Based Continual Reassessment Method (CRM) Dose Finding Designs
2016-11-04	packagedocs	Build Website of Package Documentation
2016-11-04	RLRsim	Exact (Restricted) Likelihood Ratio Tests for Mixed and Additive Models
2016-11-03	ADDT	Analysis of Accelerated Destructive Degradation Test Data
2016-11-03	geojsonlint	Tools for Validating 'GeoJSON'
2016-11-03	inca	Integer Calibration
2016-11-03	listviewer	'htmlwidget' for Interactive Views of R Lists
2016-11-03	MiRAnorm	Adaptive Normalization for miRNA Data
2016-11-03	packHV	A few Useful Functions for Statisticians
2016-11-03	PhViD	PharmacoVigilance Signal Detection
2016-11-03	rdomains	Get the Category of Content Hosted by a Domain
2016-11-03	unsystation	Stationarity Test Based on Unsystematic Sub-Sampling
2016-11-02	ConnMatTools	Tools for Working with Connectivity Data
2016-11-02	dbarts	Discrete Bayesian Additive Regression Trees Sampler
2016-11-02	ez	Easy Analysis and Visualization of Factorial Experiments
2016-11-02	likelihoodAsy	Functions for Likelihood Asymptotics
2016-11-01	BMRV	Bayesian Models for Rare Variant Association Analysis
2016-11-01	colorplaner	A 'ggplot2' Extension to Visualize Two Variables per Color Aesthetic Through Color Space Projections
2016-11-01	dtables	Simplifying Descriptive Frequencies and Statistics
2016-11-01	R.oo	R Object-Oriented Programming with or without References
2016-11-01	rplotengine	R as a Plotting Engine
2016-11-01	rtext	R6 Objects for Text and Data
2016-11-01	stringb	Convenient Base R String Handling
2016-10-31	colourlovers	R Client for the COLOURlovers API
2016-10-31	finreportr	Financial Data from U.S. Securities and Exchange Commission
2016-10-31	hoardeR	Collect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices
2016-10-31	ManyTests	Multiple Testing Procedures of Cox (2011) and Wong and Cox (2007)
2016-10-31	rRAP	Real-Time Adaptive Penalization for Streaming Lasso Models
2016-10-30	AdjBQR	Adjusted Bayesian Quantile Regression Inference
2016-10-30	bigtcr	Nonparametric Analysis of Bivariate Gap Time with Competing Risks
2016-10-30	gtheory	Apply Generalizability Theory with R
2016-10-30	InformationValue	Performance Analysis and Companion Functions for Binary Classification Models
2016-10-30	mhtboot	Multiple Hypothesis Test Based on Distribution of p Values
2016-10-30	RDota2	An R Steam API Client for Valve's Dota2
2016-10-30	rgeoapi	Get Information from the GeoAPI
2016-10-30	Rlinkedin	Access to the LinkedIn API via R
2016-10-29	acepack	ACE and AVAS for Selecting Multiple Regression Transformations
2016-10-29	endogenous	Classical Simultaneous Equation Models
2016-10-29	ggswissmaps	Offers Various Swiss Maps as Data Frames and 'ggplot2' Objects
2016-10-29	IMFData	R Interface for International Monetary Fund(IMF) Data API
2016-10-29	ltbayes	Simulation-Based Bayesian Inference for Latent Traits of Item Response Models
2016-10-29	MatrixLDA	Penalized Matrix-Normal Linear Discriminant Analysis
2016-10-29	measurements	Tools for Units of Measurement
2016-10-29	NetworkComparisonTest	Statistical Comparison of Two Networks Based on Three Invariance Measures
2016-10-29	proto	Prototype Object-Based Programming
2016-10-29	psidR	Build Panel Data Sets from PSID Raw Data
2016-10-29	QFASA	Quantitative Fatty Acid Signature Analysis
2016-10-29	Ramble	Parser Combinator for R
2016-10-29	SpeciesMix	Fit Mixtures of Archetype Species
2016-10-29	spftir	Pre-Processing and Analysis of Mid-Infrared Spectral Region
2016-10-29	triangulation	Determine Position of Observer
2016-10-28	MIDN	Nearly Exact Sample Size Calculation for Exact Powerful Nonrandomized Tests for Differences Between Binomial Proportions
2016-10-28	ontologyPlot	Functions for Visualising Sets of Ontological Terms
2016-10-28	ontologySimilarity	Functions for Calculating Ontological Similarities
2016-10-28	PatternClass	Class-Focused Pattern Metric Comparisons using Simulation
2016-10-28	ShapeSelectForest	Shape Selection for Landsat Time Series of Forest Dynamics
2016-10-28	spellcheckr	Correct the Spelling of a Given Word in the English Language
2016-10-27	fizzbuzzR	Fizz Buzz Implementation
2016-10-27	quickpsy	Fits Psychometric Functions for Multiple Groups
2016-10-27	RStata	A Bit of Glue Between R and Stata
2016-10-26	clust.bin.pair	Statistical Methods for Analyzing Clustered Matched Pair Data
2016-10-26	countyweather	Compiles Meterological Data for U.S. Counties
2016-10-26	fasttime	Fast Utility Function for Time Parsing and Conversion
2016-10-26	geneSLOPE	Genome-Wide Association Study with SLOPE
2016-10-26	iRafNet	Integrative Random Forest for Gene Regulatory Network Inference
2016-10-26	IRATER	A R Interface for the Instantaneous RATEs (IRATE) Model
2016-10-26	migest	Methods for the Indirect Estimation of Bilateral Migration
2016-10-26	ROracle	OCI Based Oracle Database Interface for R
2016-10-26	ShapePattern	Tools for Analyzing Planar Shape and Associated Patterns
2016-10-25	adaptivetau	Tau-Leaping Stochastic Simulation
2016-10-25	DDHFm	Variance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
2016-10-25	feedeR	Read RSS/Atom Feeds from R
2016-10-25	GeneticSubsetter	Identify Favorable Subsets of Germplasm Collections
2016-10-25	gym	Provides Access to the OpenAI Gym API
2016-10-25	homeR	Useful Functions for Building Physics
2016-10-25	JRF	Joint Random Forest (JRF) for the Simultaneous Estimation of Multiple Related Networks
2016-10-25	lucid	Printing Floating Point Numbers in a Human-Friendly Format
2016-10-25	pbdDEMO	Programming with Big Data – Demonstrations and Examples Using 'pbdR' Packages
2016-10-25	poliscidata	Datasets and Functions Featured in Pollock and Edwards R Companion to Essential of Political Analysis
2016-10-25	readbulk	Read and Combine Multiple Data Files
2016-10-25	scrypt	scrypt key derivation functions for R
2016-10-25	sns	Stochastic Newton Sampler (SNS)
2016-10-24	ARTool	Aligned Rank Transform
2016-10-24	graphicsQC	Quality Control for Graphics in R
2016-10-24	ldatuning	Tuning of the Latent Dirichlet Allocation Models Parameters
2016-10-23	bacr	Bayesian Adjustment for Confounding
2016-10-23	ClickClust	Model-Based Clustering of Categorical Sequences
2016-10-23	photobiologyLamps	Spectral Data of Light Emission by Lamps
2016-10-23	rchallenge	A Simple Data Science Challenge System
2016-10-23	stsm	Structural Time Series Models
2016-10-22	countytimezones	Convert from UTC to Local Time for United States Counties
2016-10-22	Exact	Unconditional Exact Test
2016-10-22	gitgadget	Rstudio Addin for Version Control and Assignment Management using Git
2016-10-22	semTools	Useful Tools for Structural Equation Modeling
2016-10-22	spMC	Continuous-Lag Spatial Markov Chains
2016-10-21	gWQS	Generalized Weighted Quantile Sum Regression
2016-10-21	MultNonParam	Multivariate Nonparametric Methods
2016-10-21	pbdDMAT	'pbdR' Distributed Matrix Methods
2016-10-21	ramidst	An Interface to the AMIDST Toolbox for Data Stream Processing
2016-10-21	RI2by2	Randomization Inference for Treatment Effects on a Binary Outcome
2016-10-21	Rknots	Topological Analysis of Knotted Proteins, Biopolymers and 3D Structures
2016-10-21	scmamp	Statistical Comparison of Multiple Algorithms in Multiple Problems
2016-10-20	ABC.RAP	Array Based CpG Region Analysis Pipeline
2016-10-20	aplore3	Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013)
2016-10-20	Barnard	Barnard's Unconditional Test
2016-10-20	BayesLogit	Logistic Regression
2016-10-20	corlink	Record Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields
2016-10-20	ggloop	Create 'ggplot2' Plots in a Loop
2016-10-20	latdiag	Draws Diagrams Useful for Checking Latent Scales
2016-10-20	MullerPlot	Generates Muller Plot from Population/Abundance/Frequency Dynamics Data
2016-10-20	R.matlab	Read and Write MAT Files and Call MATLAB from Within R
2016-10-20	Rsurrogate	Robust Estimation of the Proportion of Treatment Effect Explained by Surrogate Marker Information
2016-10-20	SafeBayes	Generalized and Safe-Bayesian Ridge and Lasso Regression
2016-10-20	validatejsonr	Validate JSON Against JSON Schemas
2016-10-20	wavethresh	Wavelets Statistics and Transforms
2016-10-19	COUNT	Functions, Data and Code for Count Data
2016-10-19	gamlss.add	Extra Additive Terms for GAMLSS Models
2016-10-19	PCSinR	Parallel Constraint Satisfaction Networks in R
2016-10-18	BarcodingR	Species Identification using DNA Barcodes
2016-10-18	cryst	Calculate the Relative Crystallinity of Starch by XRD and FTIR
2016-10-18	gamlss.data	GAMLSS Data
2016-10-18	GuardianR	The Guardian API Wrapper
2016-10-18	jwutil	Tools for Data Manipulation and Testing
2016-10-18	NPCD	Nonparametric Methods for Cognitive Diagnosis
2016-10-18	PerFit	Person Fit
2016-10-18	sirad	Functions for Calculating Daily Solar Radiation and Evapotranspiration
2016-10-18	TDPanalysis	Granier's Sap Flow Sensors (TDP) Analysis
2016-10-18	trip	Tools for the Analysis of Animal Track Data
2016-10-18	vdg	Variance Dispersion Graphs and Fraction of Design Space Plots
2016-10-18	VIMGUI	Visualization and Imputation of Missing Values - Graphical User Interface
2016-10-18	zoib	Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression
2016-10-17	gRain	Graphical Independence Networks
2016-10-17	GraphFactor	Network Topology of Intravariable Clusters with Intervariable Links
2016-10-17	iemisc	Irucka Embry's Miscellaneous Functions
2016-10-17	lucr	Currency Formatting and Conversion
2016-10-17	metafuse	Fused Lasso Approach in Regression Coefficient Clustering
2016-10-17	nmfgpu4R	Non-Negative Matrix Factorization (NMF) using CUDA
2016-10-17	pageviews	An API Client for Wikimedia Traffic Data
2016-10-17	phylolm	Phylogenetic Linear Regression
2016-10-17	Rchoice	Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters
2016-10-17	SeqFeatR	A Tool to Associate FASTA Sequences and Features
2016-10-17	Tcomp	Data from the 2010 Tourism Forecasting Competition
2016-10-16	betategarch	Simulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models
2016-10-16	histogram	Construction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins
2016-10-16	KnapsackSampling	Generate Feasible Samples of a Knapsack Problem
2016-10-16	ssym	Fitting Semi-Parametric log-Symmetric Regression Models
2016-10-15	ADPclust	Fast Clustering Using Adaptive Density Peak Detection
2016-10-15	BEACH	Biometric Exploratory Analysis Creation House
2016-10-15	fontLiberation	Liberation Fonts
2016-10-15	mnormt	The Multivariate Normal and t Distributions
2016-10-15	RSarules	Random Sampling Association Rules from a Transaction Dataset
2016-10-15	SimReg	Similarity Regression
2016-10-15	types	Type Annotations
2016-10-14	clues	Clustering Method Based on Local
2016-10-14	dbfaker	A Tool to Ensure the Validity of Database Writes
2016-10-14	graphscan	Cluster Detection with Hypothesis Free Scan Statistic
2016-10-14	highmean	Two-Sample Tests for High-Dimensional Mean Vectors
2016-10-14	in2extRemes	Into the extRemes Package
2016-10-14	ISR3	Iterative Sequential Regression
2016-10-14	mefa4	Multivariate Data Handling with S4 Classes and Sparse Matrices
2016-10-14	scan	Single-Case Data Analyses for Single and Multiple AB Designs
2016-10-14	seismicRoll	Fast Rolling Functions for Seismology using Rcpp
2016-10-14	snow	Simple Network of Workstations
2016-10-14	tutorial	Convert R Markdown Files to DataCamp Light HTML Files
2016-10-13	convertr	Convert Between Units
2016-10-13	DMwR2	Functions and Data for the Second Edition of "Data Mining with R"
2016-10-13	easyreg	Easy Regression
2016-10-13	ENiRG	Ecological Niche in R and GRASS
2016-10-13	MetaAnalyser	An Interactive Visualisation of Meta-Analysis as a Physical Weighing Machine
2016-10-13	pbdBASE	Programming with Big Data – Base Wrappers for Distributed Matrices
2016-10-13	performanceEstimation	An Infra-Structure for Performance Estimation of Predictive Models
2016-10-13	pgraph	Build Dependency Graphs using Projection
2016-10-13	seewave	Sound Analysis and Synthesis
2016-10-12	daewr	Design and Analysis of Experiments with R
2016-10-12	ggseas	'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
2016-10-12	MethodCompare	Bias and Precision Plots to Compare Two Measurements with Possibly Heteroscedastic Measurement Errors
2016-10-12	mpr	Multi-Parameter Regression (MPR)
2016-10-12	nLTT	Calculate the NLTT Statistic
2016-10-12	PRISMAstatement	Plot Flow Charts According to the "PRISMA" Statement
2016-10-12	rbokeh	R Interface for Bokeh
2016-10-12	seqmon	Group Sequential Design Class for Clinical Trials
2016-10-12	shinythemes	Themes for Shiny
2016-10-12	spaero	Software for Project AERO
2016-10-11	exp2flux	Convert Gene EXPression Data to FBA FLUXes
2016-10-11	Fgmutils	Forest Growth Model Utilities
2016-10-11	lokern	Kernel Regression Smoothing with Local or Global Plug-in Bandwidth
2016-10-11	regspec	Non-Parametric Bayesian Spectrum Estimation for Multirate Data
2016-10-10	cheddar	Analysis and Visualisation of Ecological Communities
2016-10-10	corrr	Correlations in R
2016-10-10	dti	Analysis of Diffusion Weighted Imaging (DWI) Data
2016-10-10	haploReconstruct	Reconstruction of Haplotype-Blocks from Time Series Data
2016-10-10	mcprofile	Testing Generalized Linear Hypotheses for Generalized Linear Model Parameters by Profile Deviance
2016-10-10	postGIStools	Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases
2016-10-10	rgw	Goodman-Weare Affine-Invariant Sampling
2016-10-10	tweenr	Interpolate Data for Smooth Animations
2016-10-09	aVirtualTwins	Adaptation of Virtual Twins Method from Jared Foster
2016-10-09	QQperm	Permutation Based QQ Plot and Inflation Factor Estimation
2016-10-09	reldist	Relative Distribution Methods
2016-10-09	selectiongain	A Tool for Calculation and Optimization of the Expected Gain from Multi-Stage Selection
2016-10-09	valorate	Velocity and Accuracy of the LOg-RAnk TEst
2016-10-08	extremogram	Estimation of Extreme Value Dependence for Time Series Data
2016-10-08	g2f	Find and Fill Gaps in Metabolic Networks
2016-10-08	lazyrmd	Render R Markdown Outputs Lazily
2016-10-08	ptwikiwords	Words Used in Portuguese Wikipedia
2016-10-07	gamair	Data for "GAMs: An Introduction with R"
2016-10-07	machina	Machina Time Series Generation and Backtesting
2016-10-07	powerbydesign	Power Estimates for ANOVA Designs
2016-10-07	rpql	Regularized PQL for Joint Selection in GLMMs
2016-10-07	RSeed	Borenstein Analysis
2016-10-07	sharpeRratio	Moment-Free Estimation of Sharpe Ratios
2016-10-07	shinyTime	A Time Input Widget for Shiny
2016-10-07	simLife	Simulation of Fatigue Lifetimes
2016-10-07	TROM	Transcriptome Overlap Measure
2016-10-06	reportr	A General Message and Error Reporting System
2016-10-06	RSSL	Implementations of Semi-Supervised Learning Approaches for Classification
2016-10-06	tsSelect	Execution of Time Series Models
2016-10-05	automultinomial	Autologistic and Automultinomial Spatial Regression and Variable Selection
2016-10-05	codetools	Code Analysis Tools for R
2016-10-05	platetools	Tools and Plots for Multi-Well Plates
2016-10-05	RAMpath	Structural Equation Modeling Using the Reticular Action Model (RAM) Notation
2016-10-05	Rodam	Wrapper Functions for 'ODAM' (Open Data for Access and Mining) Web Services
2016-10-05	sAIC	Akaike Information Criterion for Sparse Estimation
2016-10-05	SAPP	Statistical Analysis of Point Processes
2016-10-05	ssc	Semi-Supervised Classification Methods
2016-10-05	SurvDisc	Discrete Time Survival and Longitudinal Data Analysis
2016-10-04	backpipe	Backward Pipe Operator
2016-10-04	bgsmtr	Bayesian Group Sparse Multi-Task Regression
2016-10-04	changepoint	Methods for Changepoint Detection
2016-10-04	ordDisp	Separating Location and Dispersion in Ordinal Regression Models
2016-10-04	RSurveillance	Design and Analysis of Disease Surveillance Activities
2016-10-03	kernlab	Kernel-Based Machine Learning Lab
2016-10-03	rfPermute	Estimate Permutation p-Values for Random Forest Importance Metrics
2016-10-03	spcr	Sparse Principal Component Regression
2016-10-03	tigerhitteR	Pre-Process of Time Series Data Set in R
2016-10-02	colorscience	Color Science Methods and Data
2016-10-02	datadr	Divide and Recombine for Large, Complex Data
2016-10-02	EBASS	Sample Size Calculation Method for Cost-Effectiveness Studies Based on Expected Value of Perfect Information
2016-10-02	enviPat	Isotope Pattern, Profile and Centroid Calculation for Mass Spectrometry
2016-10-02	fixedTimeEvents	The Distribution of Distances Between Discrete Events in Fixed Time
2016-10-02	gofCopula	Goodness-of-Fit Tests for Copulae
2016-10-02	mcgfa	Mixtures of Contaminated Gaussian Factor Analyzers
2016-10-01	expandFunctions	Feature Matrix Builder
2016-10-01	LANDD	Liquid Association for Network Dynamics Detection
2016-10-01	linkR	3D Lever and Linkage Mechanism Modeling
2016-10-01	sBIC	Computing the Singular BIC for Multiple Models
2016-10-01	seleniumPipes	R Client Implementing the W3C WebDriver Specification
2016-10-01	smam	Statistical Modeling of Animal Movements
2016-10-01	supervisedPRIM	Supervised Classification Learning and Prediction using Patient Rule Induction Method (PRIM)
2016-09-30	FrF2	Fractional Factorial Designs with 2-Level Factors
2016-09-30	sublime	Automatic Lesion Incidence Estimation and Detection using Multi-Modality Longitudinal Magnetic Resonance Images
2016-09-29	addinslist	Discover and Install Useful RStudio Addins
2016-09-29	bfa	Bayesian Factor Analysis
2016-09-29	BigSEM	Constructing Large Systems of Structural Equations
2016-09-29	DPBBM	Dirichlet Process Beta-Binomial Mixture
2016-09-29	gdmp	Genomic Data Management
2016-09-29	MetaIntegrator	Meta-Analysis of Gene Expression Data
2016-09-29	npsp	Nonparametric Spatial Statistics
2016-09-29	spcadjust	Functions for Calibrating Control Charts
2016-09-28	AncestryMapper	Assigning Ancestry Based on Population References
2016-09-28	cartogram	Create Cartograms with R
2016-09-28	curry	Partial Function Application with %<%, %-<%, and %><%
2016-09-28	DJL	Distance Measure Based Judgment and Learning
2016-09-28	gcbd	'GPU'/CPU Benchmarking in Debian-Based Systems
2016-09-28	histmdl	A Most Informative Histogram-Like Model
2016-09-28	jiebaR	Chinese Text Segmentation
2016-09-28	MatchItSE	Calculates SE for Matched Samples from 'MatchIt'
2016-09-28	papayar	View Medical Research Images using the Papaya JavaScript Library
2016-09-28	ragtop	Pricing Equity Derivatives with Extensions of Black-Scholes
2016-09-28	RCircos	Circos 2D Track Plot
2016-09-28	rcmdcheck	Run 'R CMD check' from 'R' and Capture Results
2016-09-27	nontarget	Detecting Isotope, Adduct and Homologue Relations in LC-MS Data
2016-09-27	RSauceLabs	R Wrapper for 'SauceLabs' REST API
2016-09-27	sbtools	USGS ScienceBase Tools
2016-09-26	activity	Animal Activity Statistics
2016-09-26	BioFTF	Biodiversity Assessment Using Functional Tools
2016-09-26	CAMAN	Finite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
2016-09-26	clogitLasso	Lasso Estimation of Conditional Logistic Regression Models for Matched Case-Control Studies
2016-09-26	dataframes2xls	Write Data Frames to Xls Files
2016-09-26	GUILDS	Implementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure
2016-09-26	malani	Machine Learning Assisted Network Inference
2016-09-26	momentchi2	Moment-Matching Methods for Weighted Sums of Chi-Squared Random Variables
2016-09-26	PersomicsArray	Automated Persomics Array Image Extraction
2016-09-26	svgPanZoom	R 'Htmlwidget' to Add Pan and Zoom to Almost any R Graphic
2016-09-26	textmining	Integration of Text Mining and Topic Modeling Packages
2016-09-26	TSS.RESTREND	Time Series Segmentation of Residual Trends
2016-09-25	ensembleR	Ensemble Models in R
2016-09-25	HiCfeat	Multiple Logistic Regression for 3D Chromatin Domain Border Analysis
2016-09-25	timsac	Time Series Analysis and Control Package
2016-09-24	energyr	Data Published by the United States Federal Energy Regulatory Commission
2016-09-24	geepack	Generalized Estimating Equation Package
2016-09-24	PANICr	PANIC Tests of Nonstationarity
2016-09-24	pewdata	Reproducible Retrieval of Pew Research Center Datasets
2016-09-24	pkmon	Least-Squares Estimator under k-Monotony Constraint for Discrete Functions
2016-09-24	plogr	The 'plog' C++ Logging Library
2016-09-24	QRAGadget	A 'Shiny' Gadget for Interactive 'QRA' Visualizations
2016-09-24	Rdice	A Collection of Functions to Experiment Dice Rolls
2016-09-23	fishMod	Fits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models
2016-09-23	hkevp	Spatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012)
2016-09-23	MKmisc	Miscellaneous Functions from M. Kohl
2016-09-23	pbdPROF	Programming with Big Data — MPI Profiling Tools
2016-09-23	prepdat	Preparing Experimental Data for Statistical Analysis
2016-09-23	pseval	Methods for Evaluating Principal Surrogates of Treatment Response
2016-09-23	SuppDists	Supplementary Distributions
2016-09-23	trelloR	R API for Trello
2016-09-22	contrast	A Collection of Contrast Methods
2016-09-22	desirability	Function Optimization and Ranking via Desirability Functions
2016-09-22	FuzzyMCDM	Multi-Criteria Decision Making Methods for Fuzzy Data
2016-09-22	glmmBUGS	Generalised Linear Mixed Models with BUGS and JAGS
2016-09-22	iemisctext	Irucka Embry's Miscellaneous Text Collection
2016-09-22	MCDM	Multi-Criteria Decision Making Methods for Crisp Data
2016-09-22	nadiv	(Non)Additive Genetic Relatedness Matrices
2016-09-22	onlinePCA	Online Principal Component Analysis
2016-09-22	rcanvec	Access and Plot CanVec and CanVec+ Data for Rapid Basemap Creation in Canada
2016-09-22	RcmdrPlugin.PcaRobust	R Commander Plug-in for Robust Principal Component Analysis
2016-09-22	rorcid	Interface to the 'Orcid.org' 'API'
2016-09-22	sparseLDA	Sparse Discriminant Analysis
2016-09-22	spikes	Detecting Election Fraud from Irregularities in Vote-Share Distributions
2016-09-22	strategicplayers	Strategic Players
2016-09-22	topologyGSA	Gene Set Analysis Exploiting Pathway Topology
2016-09-21	BSGW	Bayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression
2016-09-21	bst	Gradient Boosting
2016-09-21	coreNLP	Wrappers Around Stanford CoreNLP Tools
2016-09-21	dCovTS	Distance Covariance and Correlation for Time Series Analysis
2016-09-21	sFFLHD	Sequential Full Factorial-Based Latin Hypercube Design
2016-09-21	simPATHy	A Method for Simulating Data from Perturbed Biological Pathways
2016-09-21	STEPCAM	ABC-SMC Inference of STEPCAM
2016-09-21	textgRid	Praat TextGrid Objects in R
2016-09-21	ungeneanno	Collate Gene Annotation Data from Uniprot and NIH Gene Databases
2016-09-20	aspi	Analysis of Symmetry of Parasitic Infections
2016-09-20	citr	'RStudio' Add-in to Insert Markdown Citations
2016-09-20	coenoflex	Gradient-Based Coenospace Vegetation Simulator
2016-09-20	ctl	Correlated Trait Locus (CTL) Mapping in R
2016-09-20	diseasemapping	Modelling Spatial Variation in Disease Risk for Areal Data
2016-09-20	eva	Extreme Value Analysis with Goodness-of-Fit Testing
2016-09-20	GMDH	Short Term Forecasting via GMDH-Type Neural Network Algorithms
2016-09-20	hdlm	Fitting High Dimensional Linear Models
2016-09-20	IDSpatialStats	Estimate Global Clustering in Infectious Disease
2016-09-20	optpart	Optimal Partitioning of Similarity Relations
2016-09-20	PBSddesolve	Solver for Delay Differential Equations
2016-09-20	quantregGrowth	Growth Charts via Regression Quantiles
2016-09-20	tab	Functions for Creating Summary Tables for Statistical Reports
2016-09-19	htdp	Horizontal Time Dependent Positioning
2016-09-19	joinXL	Perform Joins or Minus Queries on 'Excel' Files
2016-09-19	marelac	Tools for Aquatic Sciences
2016-09-19	mdhglm	Multivariate Double Hierarchical Generalized Linear Models
2016-09-19	Tlasso	Non-Convex Optimization and Statistical Inference for Sparse Tensor Graphical Models
2016-09-19	UCR.ColumnNames	Fixes Column Names for Uniform Crime Report "Offenses Known and Clearance by Arrest" Datasets
2016-09-18	fitdc	Garmin FIT File Decoder
2016-09-18	RgoogleMaps	Overlays on Static Maps
2016-09-17	brm	Binary Regression Model
2016-09-17	BTR	Training and Analysing Asynchronous Boolean Models
2016-09-17	MarkowitzR	Statistical Significance of the Markowitz Portfolio
2016-09-17	matlib	Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics
2016-09-17	PortfolioEffectEstim	High Frequency Price Estimators by PortfolioEffect
2016-09-17	quickmapr	Quickly Map and Explore Spatial Data
2016-09-17	remote	Empirical Orthogonal Teleconnections in R
2016-09-17	telegram	R Wrapper Around the Telegram Bot API
2016-09-17	timevis	Create Interactive Timeline Visualizations in R
2016-09-16	AEDForecasting	Change Point Analysis in ARIMA Forecasting
2016-09-16	AlignStat	Comparison of Alternative Multiple Sequence Alignments
2016-09-16	asremlPlus	Augments the Use of 'ASReml-R' in Fitting Mixed Models
2016-09-16	BalanceCheck	Balance Check for Multiple Covariates in Matched Observational Studies
2016-09-16	coRanking	Co-Ranking Matrix
2016-09-16	ezknitr	Avoid the Typical Working Directory Pain When Using 'knitr'
2016-09-16	fishkirkko2015	Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland
2016-09-16	pcaPA	Parallel Analysis for Ordinal and Numeric Data using Polychoric and Pearson Correlations with S3 Classes
2016-09-16	qrencoder	Quick Response Code (QR Code) / Matrix Barcode Creator
2016-09-16	read.dbc	Read Data Stored in DBC (Compressed DBF) Files
2016-09-16	splitfngr	Combined Evaluation and Split Access of Functions
2016-09-15	adimpro	Adaptive Smoothing of Digital Images
2016-09-15	aws	Adaptive Weights Smoothing
2016-09-15	CUMP	Analyze Multivariate Phenotypes by Combining Univariate Results
2016-09-15	DiceOptim	Kriging-Based Optimization for Computer Experiments
2016-09-15	fmri	Analysis of fMRI Experiments
2016-09-15	MetaboQC	Normalize Metabolomic Data using QC Signal
2016-09-15	PEGroupTesting	Population Proportion Estimation using Group Testing
2016-09-15	profmem	Simple Memory Profiling for R
2016-09-15	RRedshiftSQL	R Interface to the 'Redshift' Database
2016-09-15	sonar	Fundamental Formulas for Sonar
2016-09-15	spectral	Common Methods of Spectral Data Analysis
2016-09-14	awsMethods	Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi'
2016-09-14	customizedTraining	Customized Training for Lasso and Elastic-Net Regularized Generalized Linear Models
2016-09-14	DamiaNN	Neural Network Numerai
2016-09-14	deBInfer	Bayesian Inference for Differential Equations
2016-09-14	EDR	Estimation of the Effective Dimension Reduction ('EDR') Space
2016-09-14	EnsemblePCReg	Extensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning
2016-09-14	EnsemblePenReg	Extensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners
2016-09-14	pipefittr	Convert Nested Functions to Pipes
2016-09-14	qqvases	Animated Normal Quantile-Quantile Plots
2016-09-14	rBayesianOptimization	Bayesian Optimization of Hyperparameters
2016-09-14	regexPipes	Wrappers Around 'base::grep()' for Use with Pipes
2016-09-14	robmed	(Robust) Mediation Analysis
2016-09-14	SmartSifter	Online Unsupervised Outlier Detection Using Finite Mixtures with Discounting Learning Algorithms
2016-09-14	StepwiseTest	Multiple Testing Method to Control Generalized Family-Wise Error Rate and False Discovery Proportion
2016-09-14	sweidnumbr	Handling of Swedish Identity Numbers
2016-09-13	algorithmia	Allows you to Easily Interact with the Algorithmia Platform
2016-09-13	altmeta	Alternative Meta-Analysis Methods
2016-09-13	CopulaREMADA	Copula Mixed Effect Models for Bivariate and Trivariate Meta-Analysis of Diagnostic Test Accuracy Studies
2016-09-13	EnsembleBase	Extensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling
2016-09-13	EnsembleCV	Extensible Package for Cross-Validation-Based Integration of Base Learners
2016-09-13	fastcmh	Significant Interval Discovery with Categorical Covariates
2016-09-13	GUIDE	GUI for DErivatives in R
2016-09-13	hopbyhop	Transmissions and Receptions in a Hop by Hop Network
2016-09-13	LEAP	Constructing Gene Co-Expression Networks for Single-Cell RNA-Sequencing Data Using Pseudotime Ordering
2016-09-13	lifecourse	Quantification of Lifecourse Fluidity
2016-09-13	mhurdle	Multiple Hurdle Tobit Models
2016-09-13	TUWmodel	Lumped Hydrological Model for Education Purposes
2016-09-13	whoapi	A 'Whoapi' API Client
2016-09-12	BootMRMR	Bootstrap-MRMR Technique for Informative Gene Selection
2016-09-12	deadband	Statistical Deadband Algorithms Comparison
2016-09-12	GWsignif	Estimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests
2016-09-12	stabledist	Stable Distribution Functions
2016-09-12	StreamMetabolism	Calculate Single Station Metabolism from Diurnal Oxygen Curves
2016-09-12	stripless	Structured Trellis Displays Without Strips for Lattice Graphics
2016-09-11	ARCensReg	Fitting Univariate Censored Linear Regression Model with Autoregressive Errors
2016-09-11	crp.CSFP	CreditRisk+ Portfolio Model
2016-09-11	elasticIsing	Ising Network Estimation using Elastic Net and k-Fold Cross-Validation
2016-09-11	endtoend	Transmissions and Receptions in an End to End Network
2016-09-11	farff	A Faster 'ARFF' File Reader and Writer
2016-09-11	FREddyPro	Post-Processing EddyPro Full Output File
2016-09-11	Ritc	Isothermal Titration Calorimetry (ITC) Data Analysis
2016-09-11	rnn	Recurrent Neural Network
2016-09-10	cyclocomp	Cyclomatic Complexity of R Code
2016-09-10	FRESA.CAD	Feature Selection Algorithms for Computer Aided Diagnosis
2016-09-10	horizon	Horizon Search Algorithm
2016-09-10	hypergea	Hypergeometric Tests
2016-09-10	qha	Qualitative Harmonic Analysis
2016-09-10	rasterImage	An Improved Wrapper of Image()
2016-09-10	riem	Accesses Weather Data from the Iowa Environment Mesonet
2016-09-10	statnet	Software Tools for the Statistical Analysis of Network Data
2016-09-09	alluvial	Alluvial Diagrams
2016-09-09	alphaOutlier	Obtain Alpha-Outlier Regions for Well-Known Probability Distributions
2016-09-09	ecdfHT	Empirical CDF for Heavy Tailed Data
2016-09-09	FME	A Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis
2016-09-09	inbreedR	Analysing Inbreeding Based on Genetic Markers
2016-09-09	intamap	Procedures for Automated Interpolation
2016-09-09	OpenStreetMap	Access to Open Street Map Raster Images
2016-09-09	pcrcoal	Implementing the Coalescent Approach to PCR Simulation Developed by Weiss and Von Haeseler (NAR, 1997)
2016-09-09	permute	Functions for Generating Restricted Permutations of Data
2016-09-09	psychotools	Infrastructure for Psychometric Modeling
2016-09-09	psychotree	Recursive Partitioning Based on Psychometric Models
2016-09-09	softmaxreg	Training Multi-Layer Neural Network for Softmax Regression and Classification
2016-09-08	BayesMixSurv	Bayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification
2016-09-08	catdap	Categorical Data Analysis Program Package
2016-09-08	etseed	Client for 'etcd', a 'Key-value' Database
2016-09-08	gogamer	Go Game Data Parser
2016-09-08	GSAQ	Gene Set Analysis with QTL
2016-09-08	IAPWS95	Thermophysical Properties of Water and Steam
2016-09-08	mpt	Multinomial Processing Tree Models
2016-09-08	phylosim	Flexible Simulations of Biological Sequence Evolution
2016-09-08	RegressionFactory	Expander Functions for Generating Full Gradient and Hessian from Single-Slot and Multi-Slot Base Distributions
2016-09-08	tmod	Feature Set Enrichment Analysis for Metabolomics and Transcriptomics
2016-09-07	EMA	Easy Microarray Data Analysis
2016-09-07	ggRandomForests	Visually Exploring Random Forests
2016-09-07	IsingFit	Fitting Ising Models Using the ELasso Method
2016-09-07	packrat	A Dependency Management System for Projects and their R Package Dependencies
2016-09-07	reconstructr	Session Reconstruction and Analysis
2016-09-07	thief	Temporal Hierarchical Forecasting
2016-09-07	TTAinterfaceTrendAnalysis	Temporal Trend Analysis Graphical Interface
2016-09-06	AquaEnv	Integrated Development Toolbox for Aquatic Chemical Model Generation
2016-09-06	dhga	Differential Hub Gene Analysis
2016-09-06	hypoparsr	Multi-Hypothesis CSV Parser
2016-09-06	imputeMissings	Impute Missing Values in a Predictive Context
2016-09-06	plotwidgets	Spider Plots, ROC Curves, Pie Charts and More for Use in Other Plots
2016-09-06	rrcov	Scalable Robust Estimators with High Breakdown Point
2016-09-06	samplesize4surveys	Sample Size Calculations for Complex Surveys
2016-09-06	SpadeR	Species-Richness Prediction and Diversity Estimation with R
2016-09-06	tgcd	Thermoluminescence Glow Curve Deconvolution
2016-09-06	urca	Unit Root and Cointegration Tests for Time Series Data
2016-09-05	derivmkts	Functions and R Code to Accompany Derivatives Markets
2016-09-05	episheet	Rothman's Episheet
2016-09-05	madr	Model Averaged Double Robust Estimation
2016-09-05	RobLox	Optimally Robust Influence Curves and Estimators for Location and Scale
2016-09-05	rrcovNA	Scalable Robust Estimators with High Breakdown Point for Incomplete Data
2016-09-05	tableMatrix	Combines 'data.table' and 'matrix' Classes
2016-09-04	advclust	Object Oriented Advanced Clustering
2016-09-04	distrEllipse	S4 Classes for Elliptically Contoured Distributions
2016-09-04	distrMod	Object Oriented Implementation of Probability Models
2016-09-04	evclust	Evidential Clustering
2016-09-04	RcmdrPlugin.FuzzyClust	R Commander Plug-in for Fuzzy Clustering Methods (Fuzzy C-Means and Gustafson Kessel)
2016-09-03	MapGAM	Mapping Smoothed Effect Estimates from Individual-Level Data
2016-09-03	misclassGLM	Computation of Generalized Linear Models with Misclassified Covariates Using Side Information
2016-09-03	musica	Multiscale Climate Model Assessment
2016-09-03	psData	Download Regularly Maintained Political Science Data Sets
2016-09-03	reutils	Talk to the NCBI EUtils
2016-09-03	ROCS	Receiver Operating Characteristics Surface
2016-09-03	spatialClust	Spatial Clustering using Fuzzy Geographically Weighted Clustering
2016-09-02	FPCA2D	Two Dimensional Functional Principal Component Analysis
2016-09-02	paleobioDB	Download and Process Data from the Paleobiology Database
2016-09-02	rminer	Data Mining Classification and Regression Methods
2016-09-02	splus2R	Supplemental S-PLUS Functionality in R
2016-09-02	treeclim	Numerical Calibration of Proxy-Climate Relationships
2016-09-01	ACSNMineR	Gene Enrichment Analysis from ACSN Maps or GMT Files
2016-09-01	AFM	Atomic Force Microscope Image Analysis
2016-09-01	biwavelet	Conduct Univariate and Bivariate Wavelet Analyses
2016-09-01	earthtones	Derive a Color Palette from a Particular Location on Earth
2016-09-01	EffectStars2	Effect Stars
2016-09-01	JWileymisc	Miscellaneous Utilities and Functions
2016-09-01	statcomp	Statistical Complexity and Information Measures for Time Series Analysis
2016-09-01	versions	Query and Install Specific Versions of Packages on CRAN
2016-08-31	fpa	Spatio-Temporal Fixation Pattern Analysis
2016-08-31	paintmap	Plotting Paintmaps
2016-08-31	rggobi	Interface Between R and 'GGobi'
2016-08-31	rslp	A Stemming Algorithm for the Portuguese Language
2016-08-31	T2EQ	Functions for Applying the T^2-Test for Equivalence
2016-08-31	TLdating	Tools for Thermoluminescences Dating
2016-08-31	VIFCP	Detecting Change-Points via VIFCP Method
2016-08-31	xlutils3	Extract Multiple Excel Files at Once
2016-08-30	archivist.github	Tools for Archiving, Managing and Sharing R Objects via GitHub
2016-08-30	CorrectOverloadedPeaks	Correct Overloaded Peaks from GC-APCI-MS Data
2016-08-30	drc	Analysis of Dose-Response Curves
2016-08-30	extRemes	Extreme Value Analysis
2016-08-30	indicspecies	Relationship Between Species and Groups of Sites
2016-08-30	LogicReg	Logic Regression
2016-08-30	naturalsort	Natural Ordering
2016-08-30	PASenseWear	Summarize Daily Physical Activity from 'SenseWear' Accelerometer Data
2016-08-30	represtools	Reproducible Research Tools
2016-08-30	RSSOP	Simulation of Supply Reservoir Systems using Standard Operation Policy
2016-08-30	sharpshootR	A Soil Survey Toolkit
2016-08-30	svmpath	The SVM Path Algorithm
2016-08-30	truncdist	Truncated Random Variables
2016-08-29	censusGeography	Changes United States Census Geographic Code into Name of Location
2016-08-29	climatol	Climate Tools (Series Homogenization and Derived Products)
2016-08-29	gplm	Generalized Partial Linear Models (GPLM)
2016-08-29	harvestr	A Parallel Simulation Framework
2016-08-29	Langevin	Langevin Analysis in One and Two Dimensions
2016-08-29	MetaheuristicFPA	An Implementation of Flower Pollination Algorithm in R
2016-08-29	spate	Spatio-Temporal Modeling of Large Data Using a Spectral SPDE Approach
2016-08-29	spselect	Selecting Spatial Scale of Covariates in Regression Models
2016-08-29	tokenizers	A Consistent Interface to Tokenize Natural Language Text
2016-08-28	AHR	Estimation and Testing of Average Hazard Ratios
2016-08-28	dynpanel	Dynamic Panel Data Models
2016-08-28	intubate	Interface to Popular R Functions for Data Science Pipelines
2016-08-28	REPPlab	R Interface to 'EPP-Lab', a Java Program for Exploratory Projection Pursuit
2016-08-28	RSKC	Robust Sparse K-Means
2016-08-28	shinyFiles	A Server-Side File System Viewer for Shiny
2016-08-28	slp	Discrete Prolate Spheroidal (Slepian) Sequence Regression Smoothers
2016-08-27	digitize	Use Data from Published Plots in R
2016-08-27	edfun	Creating Empirical Distribution Functions
2016-08-27	numDeriv	Accurate Numerical Derivatives
2016-08-27	polycor	Polychoric and Polyserial Correlations
2016-08-27	Rtextrankr	TextRank for Korean
2016-08-26	dagitty	Graphical Analysis of Structural Causal Models
2016-08-26	DiffusionRgqd	Inference and Analysis for Generalized Quadratic Diffusions
2016-08-26	grr	Alternative Implementations of Base R Functions
2016-08-26	MicroDatosEs	Utilities for Official Spanish Microdata
2016-08-26	ModelMetrics	Rapid Calculation of Model Metrics
2016-08-26	Rexperigen	R Interface to Experigen
2016-08-26	rglwidget	'rgl' in 'htmlwidgets' Framework
2016-08-26	rpnf	Point and Figure Package
2016-08-26	rtson	Typed JSON
2016-08-26	tframePlus	Time Frame Coding Kernel Extensions
2016-08-26	TSdata	'TSdbi' Illustration
2016-08-26	TSmisc	'TSdbi' Extensions to Wrap Miscellaneous Data Sources
2016-08-26	TSsdmx	'TSdbi' Extension to Connect with 'SDMX'
2016-08-25	GRAPE	Gene-Ranking Analysis of Pathway Expression
2016-08-25	parma	Portfolio Allocation and Risk Management Applications
2016-08-25	phonR	Tools for Phoneticians and Phonologists
2016-08-25	Rmixmod	Supervised, Unsupervised, Semi-Supervised Classification with MIXture MODelling (Interface of MIXMOD Software)
2016-08-25	sfc	Substance Flow Computation
2016-08-25	ViSiElse	A Visual Tool for Behaviour Analysis
2016-08-24	accrued	Data Quality Visualization Tools for Partially Accruing Data
2016-08-24	dglm	Double Generalized Linear Models
2016-08-24	DiffusionRimp	Inference and Analysis for Diffusion Processes via Data Imputation and Method of Lines
2016-08-24	edci	Edge Detection and Clustering in Images
2016-08-24	evidenceFactors	Reporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies
2016-08-24	funreg	Functional Regression for Irregularly Timed Data
2016-08-24	LDheatmap	Graphical Display of Pairwise Linkage Disequilibria Between SNPs
2016-08-24	lfstat	Calculation of Low Flow Statistics for Daily Stream Flow Data
2016-08-24	makeFlow	Visualizing Sequential Classifications
2016-08-24	RcmdrPlugin.lfstat	Rcmdr Plug-in for Low Flow Analysis
2016-08-23	MixSIAR	Bayesian Mixing Models in R
2016-08-23	not	Narrowest-Over-Threshold Change-Point Detection
2016-08-23	swfscMisc	Miscellaneous Functions for Southwest Fisheries Science Center
2016-08-23	tm.plugin.europresse	Import Articles from 'Europresse' Using the 'tm' Text Mining Framework
2016-08-23	toxboot	Bootstrap Methods for 'ToxCast' High Throughput Screening Data
2016-08-22	indelmiss	Insertion Deletion Analysis While Accounting for Possible Missing Data
2016-08-22	liqueueR	Implements Queue, PriorityQueue and Stack Classes
2016-08-22	SSRA	Sakai Sequential Relation Analysis
2016-08-22	timelineS	Timeline and Time Duration-Related Tools
2016-08-21	bikeshare14	Bay Area Bike Share Trips in 2014
2016-08-21	irtDemo	Item Response Theory Demo Collection
2016-08-21	PDM	Photogrammetric Distances Measurer
2016-08-21	ph2bye	Phase II Clinical Trial Design Using Bayesian Methods
2016-08-21	vows	Voxelwise Semiparametrics
2016-08-20	aemo	Download and Process AEMO Price and Demand Data
2016-08-20	boxoffice	Downloads Box Office Information for Given Dates (How Much Each Movie Earned in Theaters)
2016-08-20	ctqr	Censored and Truncated Quantile Regression
2016-08-20	datastepr	An Implementation of a SAS-Style Data Step
2016-08-20	ggghost	Capture the Spirit of Your 'ggplot2' Calls
2016-08-20	NMI	Normalized Mutual Information of Community Structure in Network
2016-08-20	predictionInterval	Prediction Interval Functions for Assessing Replication Study Results
2016-08-20	Rquake	Seismic Hypocenter Determination
2016-08-19	BGLR	Bayesian Generalized Linear Regression
2016-08-19	CDF.PSIdekick	Evaluate Differentially Private Algorithms for Publishing Cumulative Distribution Functions
2016-08-19	iLaplace	Improved Laplace Approximation for Integrals of Unimodal Functions
2016-08-19	kamila	Methods for Clustering Mixed-Type Data
2016-08-19	okcupiddata	OkCupid Profile Data for Introductory Statistics and Data Science Courses
2016-08-19	RepeatABEL	GWAS for Multiple Observations on Related Individuals
2016-08-19	rportfolios	Random Portfolio Generation
2016-08-19	SPIAssay	A Genetic-Based Assay for the Identification of Cell Lines
2016-08-19	spsurvey	Spatial Survey Design and Analysis
2016-08-19	SwarmSVM	Ensemble Learning Algorithms Based on Support Vector Machines
2016-08-18	hyperSMURF	Hyper-Ensemble Smote Undersampled Random Forests
2016-08-18	petrinetR	Building, Visualizing, Exporting and Replaying Petri Nets
2016-08-18	statcheck	Extract Statistics from Articles and Recompute p Values
2016-08-18	ucminf	General-Purpose Unconstrained Non-Linear Optimization
2016-08-17	banxicoR	Download Data from the Bank of Mexico
2016-08-17	BuyseTest	Generalized Pairwise Comparisons
2016-08-17	decompr	Global-Value-Chain Decomposition
2016-08-17	ghyp	A Package on Generalized Hyperbolic Distribution and Its Special Cases
2016-08-17	gMWT	Generalized Mann-Whitney Type Tests
2016-08-17	instaR	Access to Instagram API via R
2016-08-17	opera	Online Prediction by Expert Aggregation
2016-08-17	optimr	A Replacement and Extension of the 'optim' Function
2016-08-17	resampledata	Data Sets for Mathematical Statistics with Resampling in R
2016-08-17	rpinterest	Access Pinterest API
2016-08-17	rr	Statistical Methods for the Randomized Response Technique
2016-08-17	RRate	Estimating Replication Rate for Genome-Wide Association Studies
2016-08-16	caschrono	Séries Temporelles Avec R
2016-08-16	DiffusionRjgqd	Inference and Analysis for Jump Generalized Quadratic Diffusions
2016-08-16	getlandsat	Get Landsat 8 Data from Amazon Public Data Sets
2016-08-16	growfunctions	Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data
2016-08-16	neuralnet	Training of Neural Networks
2016-08-16	RcppParallel	Parallel Programming Tools for 'Rcpp'
2016-08-16	Rfit	Rank Estimation for Linear Models
2016-08-16	rphast	Interface to PHAST Software for Comparative Genomics
2016-08-16	rtfbs	Transcription Factor Binding Site Identification Tool
2016-08-16	wand	Retrieve 'Magic' Attributes from Files and Directories
2016-08-15	conclust	Pairwise Constraints Clustering
2016-08-15	mp	Multidimensional Projection Techniques
2016-08-15	SequenceAnalysis	Sequence Analysis
2016-08-15	statprograms	Graduate Statistics Program Datasets
2016-08-14	birdnik	Connector for the Wordnik API
2016-08-13	AcrossTic	A Cost-Minimal Regular Spanning Subgraph with TreeClust
2016-08-13	BurStMisc	Burns Statistics Miscellaneous
2016-08-13	emplik	Empirical Likelihood Ratio for Censored/Truncated Data
2016-08-13	ggThemeAssist	Add-in to Customize 'ggplot2' Themes
2016-08-13	wordspace	Distributional Semantic Models in R
2016-08-12	binsmooth	Generate PDFs and CDFs from Binned Data
2016-08-12	bundesligR	All Final Tables of the Bundesliga
2016-08-12	GlobalFit	Bi-Level Optimization of Metabolic Network Models
2016-08-12	listless	Convert Lists to Tidy Data Frames
2016-08-12	mixexp	Design and Analysis of Mixture Experiments
2016-08-12	MultiGHQuad	Multidimensional Gauss-Hermite Quadrature
2016-08-12	rangemodelR	Mid-Domain Effect and Species Richness Patterns
2016-08-12	rich	Computes and Compares Species Richnesses
2016-08-11	estatapi	R Interface to e-Stat API
2016-08-11	InformativeCensoring	Multiple Imputation for Informative Censoring
2016-08-11	NISTunits	Fundamental Physical Constants and Unit Conversions from NIST
2016-08-11	segmag	Determine Event Boundaries in Event Segmentation Experiments
2016-08-11	StagedChoiceSplineMix	Mixture of Two-Stage Logistic Regressions with Fixed Candidate Knots
2016-08-11	TestDataImputation	Missing Item Responses Imputation for Test and Assessment Data
2016-08-10	bgmfiles	Example BGM Files for the Atlantis Ecosystem Model
2016-08-10	ggpolypath	Polygons with Holes for the Grammar of Graphics
2016-08-10	machQA	QA Machina Indicators
2016-08-10	primefactr	Use Prime Factorization for Computations
2016-08-09	BOIN	Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials
2016-08-09	GLMMRR	Generalized Linear Mixed Model (GLMM) for Binary Randomized Response Data
2016-08-09	ie2misc	Irucka Embry's Miscellaneous USGS Functions
2016-08-09	MWLasso	Penalized Moving-Window Lasso Method for Genome-Wide Association Studies
2016-08-09	ssmn	Skew Scale Mixtures of Normal Distributions
2016-08-09	vaersNDvax	Non-Domestic Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present
2016-08-09	vaersvax	US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present
2016-08-08	blkbox	Data Exploration with Multiple Machine Learning Algorithms
2016-08-08	CoImp	Copula Based Imputation Method
2016-08-08	EnvNicheR	Niche Estimation
2016-08-08	midasr	Mixed Data Sampling Regression
2016-08-08	optextras	Tools to Support Optimization Possibly with Bounds and Masks
2016-08-08	sna	Tools for Social Network Analysis
2016-08-07	Rtauchen	Discretization of AR(1) Processes
2016-08-06	betareg	Beta Regression
2016-08-06	dynlm	Dynamic Linear Regression
2016-08-06	gsEasy	Gene Set Enrichment Analysis in R
2016-08-06	MLCIRTwithin	Latent Class Item Response Theory (LC-IRT) Models under Within-Item Multidimensionality
2016-08-05	APtools	Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times
2016-08-05	formattable	Create 'Formattable' Data Structures
2016-08-05	gem	File Conversion for 'Gem Infrasound Logger'
2016-08-05	RcppStreams	'Rcpp' Integration of the 'Streamulus' 'DSEL' for Stream Processing
2016-08-05	SciencesPo	A Tool Set for Analyzing Political Behavior Data
2016-08-05	uaparserjs	Parse Browser 'User-Agent' Strings into Data Frames
2016-08-04	belex	Download Historical Data from the Belgrade Stock Exchange
2016-08-04	ClimClass	Climate Classification According to Several Indices
2016-08-04	CorrMixed	Estimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models
2016-08-04	frmhet	Regression Analysis of Fractional Responses Under Unobserved Heterogeneity
2016-08-04	GEEaSPU	Adaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE)
2016-08-04	geneNetBP	Belief Propagation in Genotype-Phenotype Networks
2016-08-04	metaplotr	Creates CrossHairs Plots for Meta-Analyses
2016-08-04	multilevel	Multilevel Functions
2016-08-04	pulsar	Parallel Utilities for Lambda Selection along a Regularization Path
2016-08-04	rasterKernelEstimates	Kernel Based Estimates on in-Memory Raster Images
2016-08-04	rmsfact	Amazing Random Facts About the World's Greatest Hacker
2016-08-04	SeqAlloc	Sequential Allocation for Prospective Experiments
2016-08-04	triebeard	'Radix' Trees in 'Rcpp'
2016-08-03	frmpd	Regression Analysis of Panel Fractional Responses
2016-08-03	gaussfacts	The Greatest Mathematician Since Antiquity
2016-08-03	MagneticMap	Magnetic Laplacian Matrix and Magnetic Eigenmap Visualization
2016-08-03	npmr	Nuclear Penalized Multinomial Regression
2016-08-03	refund	Regression with Functional Data
2016-08-03	resumer	Build Resumes with R
2016-08-03	simplexreg	Regression Analysis of Proportional Data Using Simplex Distribution
2016-08-03	truncreg	Truncated Gaussian Regression Models
2016-08-02	config	Manage Environment Specific Configuration Values
2016-08-02	hdpca	Principal Component Analysis in High-Dimensional Data
2016-08-02	IRdisplay	'Jupyter' Display Machinery
2016-08-02	lmPerm	Permutation Tests for Linear Models
2016-08-02	rstack	Stack Data Type as an 'R6' Class
2016-08-02	rversions	Query 'R' Versions, Including 'r-release' and 'r-oldrel'
2016-08-01	AntAngioCOOL	Anti-Angiogenic Peptide Prediction
2016-08-01	binford	Binford's Hunter-Gatherer Data
2016-08-01	cdlTools	Tools to Download and Work with USDA Cropscape Data
2016-08-01	denovolyzeR	Statistical Analyses of De Novo Genetic Variants
2016-08-01	hyper.fit	Generic N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter
2016-08-01	IndTestPP	Tests of Independence Between Point Processes in Time
2016-08-01	RcppGetconf	'Rcpp' Interface for Querying System Configuration Variables
2016-08-01	ttbbeer	US Beer Statistics from TTB
2016-07-31	KSD	Goodness-of-Fit Tests using Kernelized Stein Discrepancy
2016-07-31	proccalibrad	Extraction of Bands from MODIS Calibrated Radiances MOD02 NRT
2016-07-30	BetaBit	Mini Games from Adventures of Beta and Bit
2016-07-30	Copula.Markov	Estimation and Statistical Process Control Under Copula-Based Time Series Models
2016-07-30	InterSIM	Simulation of Inter-Related Genomic Datasets
2016-07-30	RCMIP5	Tools for Manipulating and Summarizing CMIP5 Data
2016-07-30	TCGAretriever	Retrieve Genomic and Clinical Data from TCGA
2016-07-30	time2event	Survival and Competing Risk Analyses with Time-to-Event Data as Covariates
2016-07-30	wnominate	Roll Call Analysis Software
2016-07-30	WPC	Weighted Predictiveness Curve
2016-07-29	AhoCorasickTrie	Fast Searching for Multiple Keywords in Multiple Texts
2016-07-29	csvy	Import and Export CSV Data with a YAML Metadata Header
2016-07-29	deconstructSigs	Identifies Signatures Present in a Tumor Sample
2016-07-29	FinCal	Time Value of Money, Time Series Analysis and Computational Finance
2016-07-29	IntNMF	Integrative Clustering of Multiple Genomic Dataset
2016-07-29	microcontax	The ConTax Data Package
2016-07-29	noise	Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data
2016-07-29	presens	Interface for PreSens Fiber Optic Data
2016-07-29	prodigenr	Research Project Directory Generator
2016-07-29	Rankcluster	Model-Based Clustering for Multivariate Partial Ranking Data
2016-07-29	sbrl	Scalable Bayesian Rule Lists Model
2016-07-29	SPreFuGED	Selecting a Predictive Function for a Given Gene Expression Data
2016-07-28	files	Effective File Navigation from the R Console
2016-07-28	orca	Computation of Graphlet Orbit Counts in Sparse Graphs
2016-07-28	placement	Tools for Accessing the Google Maps API
2016-07-28	sybilDynFBA	Dynamic FBA : Dynamic Flux Balance Analysis
2016-07-28	VariableScreening	High-Dimensional Screening for Semiparametric Longitudinal Regression
2016-07-28	vines	Multivariate Dependence Modeling with Vines
2016-07-27	birk	MA Birk's Functions
2016-07-27	cellranger	Translate Spreadsheet Cell Ranges to Rows and Columns
2016-07-27	EGRET	Exploration and Graphics for RivEr Trends (EGRET)
2016-07-27	EvaluationMeasures	Collection of Model Evaluation Measure Functions
2016-07-27	iDOS	Integrated Discovery of Oncogenic Signatures
2016-07-27	JAGUAR	Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map Expression Quantitative Trait Loci (eQTL)
2016-07-27	palr	Colour Palettes for Data
2016-07-27	RecordLinkage	Record Linkage in R
2016-07-27	sEparaTe	Maximum Likelihood Estimation and Likelihood Ratio Test Functions for Separable Variance-Covariance Structures
2016-07-27	SimSCRPiecewise	'Simulates Univariate and Semi-Competing Risks Data Given Covariates and Piecewise Exponential Baseline Hazards'
2016-07-27	SNPMClust	Bivariate Gaussian Genotype Clustering and Calling for Illumina Microarrays
2016-07-27	StableEstim	Estimate the Four Parameters of Stable Laws using Different Methods
2016-07-26	AmostraBrasil	Generates Samples or Complete List of Brazilian IBGE (Instituto Brasileiro De Geografia e Estatistica) Census Households, Geocoding it by Google Maps
2016-07-26	denoiseR	Regularized Low Rank Matrix Estimation
2016-07-26	jacpop	Jaccard Index for Population Structure Identification
2016-07-26	LARF	Local Average Response Functions for Instrumental Variable Estimation of Treatment Effects
2016-07-26	lightsout	Implementation of the 'Lights Out' Puzzle Game
2016-07-26	MethyBayes	Full Bayesian Partition Model for Identifying Differentially Methylated Loci
2016-07-26	MonoPhy	Allows to Explore Monophyly (or Lack of it) of Taxonomic Groups in a Phylogeny
2016-07-26	preprosim	Lightweight Data Quality Simulation for Classification
2016-07-26	random.polychor.pa	A Parallel Analysis with Polychoric Correlation Matrices
2016-07-26	SizeEstimation	Estimating the Sizes of Populations at Risk of HIV Infection from Multiple Data Sources Using a Bayesian Hierarchical Model
2016-07-25	bigReg	Generalized Linear Models (GLM) for Large Data Sets
2016-07-25	HK80	Conversion Tools for HK80 Geographical Coordinate System
2016-07-25	longpower	Sample Size Calculations for Longitudinal Data
2016-07-25	mvst	Bayesian Inference for the Multivariate Skew-t Model
2016-07-25	runjags	Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGS
2016-07-24	GameTheoryAllocation	Tools for Calculating Allocations in Game Theory
2016-07-24	lmenssp	Linear Mixed Effects Models with Non-Stationary Stochastic Processes
2016-07-24	mcparallelDo	A Simplified Interface for Running Commands on Parallel Processes
2016-07-24	mod09nrt	Extraction of Bands from MODIS Surface Reflectance Product MOD09 NRT
2016-07-24	qat	Quality Assurance Toolkit
2016-07-24	RSVGTipsDevice	An R SVG Graphics Device with Dynamic Tips and Hyperlinks
2016-07-24	ssa	Simultaneous Signal Analysis
2016-07-24	stmCorrViz	A Tool for Structural Topic Model Visualizations
2016-07-23	fastSOM	Fast Calculation of Spillover Measures
2016-07-23	pullword	R Interface to Pullword Service
2016-07-23	track	Store Objects on Disk Automatically
2016-07-22	DIFboost	Detection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
2016-07-22	ggvis	Interactive Grammar of Graphics
2016-07-22	Holidays	Holiday and Half-Day Data, for Use with the 'TimeWarp' Package
2016-07-22	humidity	An R Package for Calculating Water Vapor Measures from Temperature and Relative Humidity
2016-07-22	icdGLM	EM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models
2016-07-22	iemiscdata	Irucka Embry's Miscellaneous Data Collection
2016-07-22	IPtoCountry	Convert IP Addresses to Country Names or Full Location with Geoplotting
2016-07-22	optDesignSlopeInt	Optimal Designs for Estimating the Slope Divided by the Intercept
2016-07-22	rbgm	Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model
2016-07-22	scriptests	Transcript-Based Unit Tests that are Easy to Create and Maintain
2016-07-22	StratifiedBalancing	Performs Stratified Covariate Balancing for Data with Discrete and Continuous Outcome Variables
2016-07-22	TimeWarp	Date Calculations and Manipulation
2016-07-21	abind	Combine Multidimensional Arrays
2016-07-21	clinsig	Clinical Significance Functions
2016-07-21	excursions	Excursion Sets and Contour Credibility Regions for Random Fields
2016-07-21	soundecology	Soundscape Ecology
2016-07-21	TripleR	Social Relation Model (SRM) Analyses for Single or Multiple Groups
2016-07-20	ChIPtest	Nonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data
2016-07-20	darch	Package for Deep Architectures and Restricted Boltzmann Machines
2016-07-20	docxtractr	Extract Data Tables and Comments from Microsoft Word Documents
2016-07-20	mvQuad	Methods for Multivariate Quadrature
2016-07-20	qcr	Quality Control Review
2016-07-20	quantable	Streamline Descriptive Analysis of Quantitative Data Matrices
2016-07-20	rstatscn	R Interface for China National Data
2016-07-20	scientoText	Text & Scientometric Analytics
2016-07-20	slackr	Send Messages, Images, R Objects and Files to 'Slack' Channels/Users
2016-07-20	udapi	Urban Dictionary API Client
2016-07-19	CarletonStats	Functions for Statistics Classes at Carleton College
2016-07-19	RForcecom	Data Integration Feature for Force.com and Salesforce.com
2016-07-18	BoardGames	Board Games and Tools for Building Board Games
2016-07-18	DWreg	Parametric Regression for Discrete Response
2016-07-18	iRegression	Regression Methods for Interval-Valued Variables
2016-07-18	mason	Build Data Structures for Common Statistical Analysis
2016-07-18	SecKW	The SecKW Distribution
2016-07-18	SinIW	The SinIW Distribution
2016-07-17	CosW	The CosW Distribution
2016-07-17	heuristica	Heuristics Including Take the Best and Unit-Weight Linear
2016-07-17	precintcon	Precipitation Intensity, Concentration and Anomaly Analysis
2016-07-17	TanB	The TanB Distribution
2016-07-16	ACDm	Tools for Autoregressive Conditional Duration Models
2016-07-16	EconDemand	General Analysis of Various Economics Demand Systems
2016-07-16	MRMR	Multivariate Regression Models for Reserving
2016-07-16	QVM	Questionnaires Validation Module
2016-07-16	sbfc	Selective Bayesian Forest Classifier
2016-07-15	easyformatr	Tools for Building R Formats
2016-07-15	lmeresampler	Bootstrap Methods for Nested Linear Mixed-Effects Models
2016-07-15	modEvA	Model Evaluation and Analysis
2016-07-15	RM.weights	Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood
2016-07-15	RStripe	A Convenience Interface for the Stripe Payment API
2016-07-15	sophisthse	Load Russian Economic Indicators from the Archive of Economic and Social Data
2016-07-15	tsne	T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
2016-07-14	artfima	ARTFIMA Model Estimation
2016-07-14	logcondens	Estimate a Log-Concave Probability Density from Iid Observations
2016-07-14	matrixLaplacian	Normalized Laplacian Matrix and Laplacian Map
2016-07-14	MCMC4Extremes	Posterior Distribution of Extreme Value Models in R
2016-07-14	midrangeMCP	Multiple Comparisons Procedures Based on Studentized Midrange and Range Distributions
2016-07-14	mlma	Multilevel Mediation Analysis
2016-07-14	Peacock.test	Two and Three Dimensional Kolmogorov-Smirnov Two-Sample Tests
2016-07-14	rDNAse	Generating Various Numerical Representation Schemes of DNA Sequences
2016-07-14	treeClust	Cluster Distances Through Trees
2016-07-13	monographaR	Taxonomic Monographs Tools
2016-07-13	rcicr	Reverse-Correlation Image-Classification Toolbox
2016-07-13	SDEFSR	Subgroup Discovery with Evolutionary Fuzzy Systems in R
2016-07-13	SensMixed	Analysis of Sensory and Consumer Data in a Mixed Model Framework
2016-07-13	smoothtail	Smooth Estimation of GPD Shape Parameter
2016-07-12	install.load	Check, Install and Load CRAN & USGS GRAN Packages
2016-07-12	lmem.qtler	Linear Mixed Effects Models for QTL Mapping for Multienvironment and Multitrait Analysis
2016-07-12	simulator	An Engine for Running Simulations
2016-07-12	VariABEL	Testing of Genotypic Variance Heterogeneity to Detect Potentially Interacting SNP
2016-07-11	ANLP	Build Text Prediction Model
2016-07-11	ezsummary	Generate Data Summary in a Tidy Format
2016-07-11	gnmf	Generalized Non-negative Matrix Factorization Based on Renyi Divergence
2016-07-11	Homeric	Doughnut Plots
2016-07-11	nbc4va	Bayes Classifier for Verbal Autopsy Data
2016-07-11	rmdHelpers	Helper Functions for Rmd Documents
2016-07-10	CIFsmry	Weighted summary of cumulative incidence functions
2016-07-10	crskdiag	Diagnostics for Fine and Gray Model
2016-07-10	D3M	Two Sample Test with Wasserstein Metric
2016-07-10	fbati	Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
2016-07-10	futile.logger	A Logging Utility for R
2016-07-10	futile.matrix	Random Matrix Generation and Manipulation
2016-07-10	krm	Kernel Based Regression Models
2016-07-10	SAMM	Some Algorithms for Mixed Models
2016-07-10	tawny	Clean Covariance Matrices Using Random Matrix Theory and Shrinkage Estimators for Portfolio Optimization
2016-07-10	tempdisagg	Methods for Temporal Disaggregation and Interpolation of Time Series
2016-07-10	thgenetics	Genetic Rare Variants Tests
2016-07-09	gwdegree	A Shiny App to Aid Interpretation of Geometrically-Weighted Degree Estimates in Exponential Random Graph Models
2016-07-09	preproviz	Tools for Visualization of Interdependent Data Quality Issues
2016-07-08	DCchoice	Analyzing Dichotomous Choice Contingent Valuation Data
2016-07-08	STB	Simultaneous Tolerance Bounds
2016-07-07	agRee	Various Methods for Measuring Agreement
2016-07-07	changepoint.np	Methods for Nonparametric Changepoint Detection
2016-07-07	fastGraph	Fast Drawing and Shading of Graphs of Statistical Distributions
2016-07-07	geotopbricks	An R Plug-in for the Distributed Hydrological Model GEOtop
2016-07-07	idbr	R Interface to the US Census Bureau International Data Base API
2016-07-07	mime	Map Filenames to MIME Types
2016-07-07	miscF	Miscellaneous Functions
2016-07-07	NetOrigin	Origin Estimation for Propagation Processes on Complex Networks
2016-07-07	RCriteo	Loading Criteo Data into R
2016-07-07	Rtnmin	Truncated Newton Function Minimization with Bounds Constraints
2016-07-07	SpectralMap	Diffusion Map and Spectral Map
2016-07-07	vietnamcode	Convert Vietnam Provincial Codes
2016-07-06	accelmissing	Missing Value Imputation for Accelerometer Data
2016-07-06	BayesTree	Bayesian Additive Regression Trees
2016-07-06	EXRQ	Extreme Regression of Quantiles
2016-07-06	linear.tools	Manipulate Formulas and Evaluate Marginal Effects
2016-07-06	MLPUGS	Multi-Label Prediction Using Gibbs Sampling (and Classifier Chains)
2016-07-06	som	Self-Organizing Map
2016-07-05	genomicper	Circular Genomic Permutation using Gwas p-Values of Association
2016-07-05	PACBO	Clustering Online Datasets
2016-07-04	BalancedSampling	Balanced and Spatially Balanced Sampling
2016-07-04	batchmeans	Consistent Batch Means Estimation of Monte Carlo Standard Errors
2016-07-04	BayesTreePrior	Bayesian Tree Prior Simulation
2016-07-04	Cite	An RStudio Addin to Insert BibTex Citation in Rmarkdown Documents
2016-07-04	csp	Correlates of State Policy Data Set in R
2016-07-04	DAMisc	Dave Armstrong's Miscellaneous Functions
2016-07-04	etrunct	Computes Moments of Univariate Truncated t Distribution
2016-07-04	gramEvol	Grammatical Evolution for R
2016-07-04	pfa	Estimates False Discovery Proportion Under Arbitrary Covariance Dependence
2016-07-04	Renext	Renewal Method for Extreme Values Extrapolation
2016-07-04	RenextGUI	GUI for Renext
2016-07-03	badgecreatr	Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme
2016-07-03	ModelMap	Modeling and Map Production using Random Forest and Stochastic Gradient Boosting
2016-07-03	wfindr	Crossword, Scrabble and Anagram Solver
2016-07-02	fmrs	Variable Selection in Finite Mixture of AFT Regression and FMR
2016-07-02	InspectChangepoint	High-Dimensional Changepoint Estimation via Sparse Projection
2016-07-02	isingLenzMC	Monte Carlo for Classical Ising Model
2016-07-02	modygliani	MOlecular DYnamics GLobal ANalysis
2016-07-02	productplots	Product Plots for R
2016-07-02	QCSimulator	A 5-Qubit Quantum Computing Simulator
2016-07-02	randNames	Package Provides Access to Fake User Data
2016-07-01	bibliospec	Reading Mass Spectrometric Search Results
2016-07-01	Comp2ROC	Compare Two ROC Curves that Intersect
2016-07-01	hypothesisr	Wrapper for the 'Hypothes.is' Web Annotation Service
2016-07-01	PoisNor	Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals
2016-07-01	rccdates	Date Functions for Swedish Cancer Data
2016-07-01	RcmdrPlugin.EcoVirtual	Rcmdr EcoVirtual Plugin
2016-06-30	BootWPTOS	Test Stationarity using Bootstrap Wavelet Packet Tests
2016-06-30	FSelector	Selecting Attributes
2016-06-30	metaheur	Metaheuristic Optimization Framework for Preprocessing Combinations
2016-06-30	mise	Clears the Workspace (Mise en Place)
2016-06-30	Segmentor3IsBack	A Fast Segmentation Algorithm
2016-06-30	wgaim	Whole Genome Average Interval Mapping for QTL Detection using Mixed Models
2016-06-29	correctedAUC	Correcting AUC for Measurement Error
2016-06-29	CP	Conditional Power Calculations
2016-06-29	DrillR	R Driver for Apache Drill
2016-06-29	EcoVirtual	Simulation of Ecological Models
2016-06-29	kernscr	Kernel Machine Score Test for Semi-Competing Risks
2016-06-29	MNM	Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks
2016-06-29	POET	Principal Orthogonal ComplEment Thresholding (POET) Method
2016-06-29	ramps	Bayesian Geostatistical Modeling with RAMPS
2016-06-29	survSNP	Power Calculations for SNP Studies with Censored Outcomes
2016-06-29	UNCLES	Unification of Clustering Results from Multiple Datasets using External Specifications
2016-06-29	vmsbase	GUI Tools to Process, Analyze and Plot Fisheries Data
2016-06-28	ggmcmc	Tools for Analyzing MCMC Simulations from Bayesian Inference
2016-06-28	pGMGM	Estimating Multiple Gaussian Graphical Models (GGM) in Penalized Gaussian Mixture Models (GMM)
2016-06-28	rankFD	Rank-Based Tests for General Factorial Designs
2016-06-27	IntegrateBs	Integration for B-Spline
2016-06-27	ldamatch	Selection of Statistically Similar Research Groups
2016-06-27	meteR	Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)
2016-06-27	SeqMADE	Network Module-Based Model in the Differential Expression Analysis for RNA-Seq
2016-06-26	couchDB	Connect to and Work with CouchDB Databases
2016-06-26	preprocomb	Tools for Preprocessing Combinations
2016-06-25	BACCT	Bayesian Augmented Control for Clinical Trials
2016-06-24	NoiseFiltersR	Label Noise Filters for Data Preprocessing in Classification
2016-06-23	babel	Ribosome Profiling Data Analysis
2016-06-23	boa	Bayesian Output Analysis Program (BOA) for MCMC
2016-06-23	docopulae	Optimal Designs for Copula Models
2016-06-23	EBS	Exact Bayesian Segmentation
2016-06-23	factorplot	Graphical Presentation of Simple Contrasts
2016-06-23	GAabbreviate	Abbreviating Items Measures using Genetic Algorithms
2016-06-23	LakeMetabolizer	Tools for the Analysis of Ecosystem Metabolism
2016-06-23	LindleyR	The Lindley Distribution and Its Modifications
2016-06-23	mscstexta4r	R Client for the Microsoft Cognitive Services Text Analytics REST API
2016-06-23	R2HTML	HTML Exportation for R Objects
2016-06-23	RcmdrPlugin.HH	Rcmdr Support for the HH Package
2016-06-23	RMThreshold	Signal-Noise Separation in Random Matrices by using Eigenvalue Spectrum Analysis
2016-06-23	shinyDND	Shiny Drag-n-Drop
2016-06-22	pearson7	Maximum Likelihood Inference for the Pearson VII Distribution with Shape Parameter 3/2
2016-06-22	rwty	R We There Yet? Visualizing MCMC Convergence in Phylogenetics
2016-06-21	fbroc	Fast Algorithms to Bootstrap Receiver Operating Characteristics Curves
2016-06-21	osi	Open Source Initiative API Connector
2016-06-21	REPTILE	Regulatory DNA Element Prediction
2016-06-20	as.color	Assign Random Colors to Unique Items in a Vector
2016-06-20	squid	Statistical Quantification of Individual Differences
2016-06-18	callr	Call R from R
2016-06-18	OUwie	Analysis of Evolutionary Rates in an OU Framework
2016-06-18	xmlparsedata	Parse Data of 'R' Code as an 'XML' Tree
2016-06-17	AGSDest	Estimation in Adaptive Group Sequential Trials
2016-06-17	compete	Analyzing Social Hierarchies
2016-06-17	DoTC	Distribution of Typicality Coefficients
2016-06-17	mosaicData	Project MOSAIC Data Sets
2016-06-17	PATHChange	A Tool for Identification of Differentially Expressed Pathways using Multi-Statistic Comparison
2016-06-17	rvest	Easily Harvest (Scrape) Web Pages
2016-06-16	gmDatabase	Accessing a Geometallurgical Database with R
2016-06-16	netgsa	Network-Based Gene Set Analysis
2016-06-16	Rphylopars	Phylogenetic Comparative Tools for Missing Data and Within-Species Variation
2016-06-16	SPIGA	Compute SPI Index using the Methods Genetic Algorithm and Maximum Likelihood
2016-06-16	wakefield	Generate Random Data Sets
2016-06-15	anesrake	ANES Raking Implementation
2016-06-15	cssTools	Cognitive Social Structure Tools
2016-06-15	IsotopeR	Stable Isotope Mixing Model
2016-06-15	mscsweblm4r	R Client for the Microsoft Cognitive Services Web Language Model REST API
2016-06-15	Sleuth2	Data Sets from Ramsey and Schafer's "Statistical Sleuth (2nd Ed)"
2016-06-15	Sleuth3	Data Sets from Ramsey and Schafer's "Statistical Sleuth (3rd Ed)"
2016-06-15	tweet2r	Twitter Collector for R and Export to 'SQLite', 'postGIS' and 'GIS' Format
2016-06-14	bpcp	Beta Product Confidence Procedure for Right Censored Data
2016-06-14	cointmonitoR	Consistent Monitoring of Stationarity and Cointegrating Relationships
2016-06-14	cointReg	Parameter Estimation and Inference in a Cointegrating Regression
2016-06-14	perccal	Implementing Double Bootstrap Linear Regression Confidence Intervals Using the 'perc-cal' Method
2016-06-14	semds	Structural Equation Multidimensional Scaling
2016-06-14	TEEReg	Trimmed Elemental Estimation for Linear Models
2016-06-13	docopt	Command-Line Interface Specification Language
2016-06-13	jsonvalidate	Validate 'JSON'
2016-06-12	AUtests	Approximate Unconditional and Permutation Tests
2016-06-12	engsoccerdata	English and European Soccer Results 1871-2016
2016-06-12	quadmesh	Quadrangle Mesh
2016-06-12	Rcplex	R Interface to CPLEX
2016-06-12	rcqp	Interface to the Corpus Query Protocol
2016-06-12	RSpectra	Solvers for Large Scale Eigenvalue and SVD Problems
2016-06-11	HDDesign	Sample Size Calculation for High Dimensional Classification Study
2016-06-11	PARSE	Model-Based Clustering with Regularization Methods for High-Dimensional Data
2016-06-11	qrng	(Randomized) Quasi-Random Number Generators
2016-06-11	SDraw	Spatially Balanced Sample Draws for Spatial Objects
2016-06-10	CombinePortfolio	Estimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies
2016-06-10	GenCAT	Genetic Class Association Testing
2016-06-10	ibm	Individual Based Models in R
2016-06-10	kehra	Collect, Assemble and Model Air Pollution, Weather and Health Data
2016-06-10	MicSim	Performing Continuous-Time Microsimulation
2016-06-10	RFinfer	Inference for Random Forests
2016-06-10	sesem	Spatially Explicit Structural Equation Modeling
2016-06-09	cape	Combined Analysis of Pleiotropy and Epistasis
2016-06-09	cloudUtil	Cloud Utilization Plots
2016-06-09	dam	Data Analysis Metabolomics
2016-06-09	hsm	A Path-Based BCD for Proximal Function of Latent Group Lasso
2016-06-09	jmotif	Time Series Analysis Toolkit Based on Symbolic Aggregate Dicretization, i.e. SAX
2016-06-09	JointModel	Semiparametric Joint Models for Longitudinal and Counting Processes
2016-06-09	mcglm	Multivariate Covariance Generalized Linear Models
2016-06-09	spaa	SPecies Association Analysis
2016-06-09	TRAMPR	'TRFLP' Analysis and Matching Package for R
2016-06-08	CARBayesdata	Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages
2016-06-08	DCG	Data Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis
2016-06-08	MGSDA	Multi-Group Sparse Discriminant Analysis
2016-06-08	morse	MOdelling Tools for Reproduction and Survival Data in Ecotoxicology
2016-06-08	mvinfluence	Influence Measures and Diagnostic Plots for Multivariate Linear Models
2016-06-08	plyr	Tools for Splitting, Applying and Combining Data
2016-06-08	Rbent	Robust Bent Line Regression
2016-06-07	BaPreStoPro	Bayesian Prediction of Stochastic Processes
2016-06-07	dvn	Access to Dataverse 3 APIs
2016-06-07	GA	Genetic Algorithms
2016-06-07	pop	A Flexible Syntax for Population Dynamic Modelling
2016-06-07	rpn	Converter and Interpreter for Reverse Polish Notation Expressions
2016-06-07	Rsampling	Ports the Workflow of "Resampling Stats" Add-in to R
2016-06-07	simsem	SIMulated Structural Equation Modeling
2016-06-07	soiltexture	Functions for Soil Texture Plot, Classification and Transformation
2016-06-06	ald	The Asymmetric Laplace Distribution
2016-06-06	bioplots	Visualization of Overlapping Results with Heatmap
2016-06-06	DAKS	Data Analysis and Knowledge Spaces
2016-06-06	DisimForMixed	Calculate Dissimilarity Matrix for Dataset with Mixed Attributes
2016-06-06	enviPick	Peak Picking for High Resolution Mass Spectrometry Data
2016-06-06	fechner	Fechnerian Scaling of Discrete Object Sets
2016-06-06	heatmapFit	Fit Statistic for Binary Dependent Variable Models
2016-06-06	muckrock	Data on Freedom of Information Act Requests
2016-06-06	PreKnitPostHTMLRender	Pre-Knitting Processing and Post HTML-Rendering Processing
2016-06-06	RClone	Partially Clonal Populations Analysis
2016-06-06	rmdshower	'R' 'Markdown' Format for 'shower' Presentations
2016-06-06	shinytoastr	Notifications from 'Shiny'
2016-06-06	uniReg	Unimodal Penalized Spline Regression using B-Splines
2016-06-04	iGasso	Statistical Tests and Utilities for Genetic Association
2016-06-04	ROpenFIGI	R Interface to OpenFIGI
2016-06-03	bapred	Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data)
2016-06-03	clikcorr	Censoring Data and Likelihood-Based Correlation Estimation
2016-06-03	flars	Functional LARS
2016-06-03	hkex.api	API to Retrieve Data from Hong Kong Stock Exchange
2016-06-03	LncPriCNet	Prioritizing Candidate LncRNAs Based on a Composite Multi-Level Network
2016-06-03	wpp2015	World Population Prospects 2015
2016-06-02	bastah	Big Data Statistical Analysis for High-Dimensional Models
2016-06-02	Dark	The Analysis of Dark Adaptation Data
2016-06-02	Dominance	ADI (Average Dominance Index), Social Network Graphs with Dual Directions, and Music Notation Graph
2016-06-02	gWidgets2tcltk	Toolkit Implementation of gWidgets2 for tcltk
2016-06-02	pkgcopier	Copy Local R Packages to Another Environment
2016-06-02	rtip	Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data
2016-06-01	gWidgets2	Rewrite of gWidgets API for Simplified GUI Construction
2016-06-01	MSQC	Multivariate Statistical Quality Control
2016-06-01	plotMElm	Plot Marginal Effects from Linear Models
2016-06-01	sybilcycleFreeFlux	Cycle-Free Flux Balance Analysis
2016-05-31	BHH2	Useful Functions for Box, Hunter and Hunter II
2016-05-31	Fahrmeir	Data from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz
2016-05-31	HandTill2001	Multiple Class Area under ROC Curve
2016-05-31	maSAE	Mandallaz' Model-Assisted Small Area Estimators
2016-05-31	multiplyr	Data Manipulation with Parallelism and Shared Memory Matrices
2016-05-31	PolyTrend	Trend Classification Algorithm
2016-05-30	ClustMMDD	Variable Selection in Clustering by Mixture Models for Discrete Data
2016-05-30	DODR	Detection of Differential Rhythmicity
2016-05-30	RItools	Randomization Inference Tools
2016-05-29	adagio	Discrete and Global Optimization Routines
2016-05-29	qrmdata	Data Sets for Quantitative Risk Management Practice
2016-05-28	arrayhelpers	Convenience Functions for Arrays
2016-05-28	cocor	Comparing Correlations
2016-05-28	softclassval	Soft Classification Performance Measures
2016-05-27	BinNor	Simultaneous Generation of Multivariate Binary and Normal Variates
2016-05-27	clusterCrit	Clustering Indices
2016-05-27	GK2011	Gaines and Kuklinski (2011) Estimators for Hybrid Experiments
2016-05-27	jose	Javascript Object Signing and Encryption
2016-05-26	CHFF	Closest History Flow Field Forecasting for Bivariate Time Series
2016-05-26	climtrends	Statistical Methods for Climate Sciences
2016-05-26	Davies	The Davies Quantile Function
2016-05-26	ddst	Data Driven Smooth Tests
2016-05-26	elliptic	Elliptic Functions
2016-05-26	fakeR	Simulates Data from a Data Frame of Different Variable Types
2016-05-26	forecTheta	Forecasting Time Series by Theta Models
2016-05-26	HTSCluster	Clustering High-Throughput Transcriptome Sequencing (HTS) Data
2016-05-26	replicationInterval	Replication Interval Functions
2016-05-26	spfrontier	Spatial Stochastic Frontier Models
2016-05-25	kantorovich	Kantorovich Distance Between Probability Measures
2016-05-25	rSARP	Functions to Create and Evaluate Search and Rescue Plans
2016-05-24	bayesbio	Miscellaneous Functions for Bioinformatics and Bayesian Statistics
2016-05-24	bitrugs	Bayesian Inference of Transmission Routes Using Genome Sequences
2016-05-24	ChangepointTesting	Change Point Estimation for Clustered Signals
2016-05-24	GiniWegNeg	Computing the Gini-Based Coefficients for Weighted and Negative Attributes
2016-05-24	pubprint	Printing Results of Statistical Computing in a Publishable Way
2016-05-24	uskewFactors	Model-Based Clustering via Mixtures of Unrestricted Skew-t Sactor Analyzer Models
2016-05-23	asd	Simulations for Adaptive Seamless Designs
2016-05-23	ILS	Interlaboratory Study
2016-05-23	MFAg	Multiple Factor Analysis (MFA)
2016-05-23	OptimaRegion	Confidence Regions for Optima
2016-05-23	YplantQMC	Plant Architectural Analysis with Yplant and QuasiMC
2016-05-22	autoSEM	Performs Specification Search in Structural Equation Models
2016-05-22	IMak	Item Maker
2016-05-22	label.switching	Relabelling MCMC Outputs of Mixture Models
2016-05-22	negenes	Estimating the Number of Essential Genes in a Genome
2016-05-22	pETM	Penalized Exponential Tilt Model
2016-05-22	prof.tree	An Alternative Display Profiling Data as Tree Structure
2016-05-22	VDAP	Peptide Array Analysis Tools
2016-05-21	ifultools	Insightful Research Tools
2016-05-21	MultiOrd	Generation of Multivariate Ordinal Variates
2016-05-21	sapa	Spectral Analysis for Physical Applications
2016-05-20	AdequacyModel	Adequacy of Probabilistic Models and General Purpose Optimization
2016-05-20	crtests	Classification and Regression Tests
2016-05-20	FADA	Variable Selection for Supervised Classification in High Dimension
2016-05-20	MonoInc	Monotonic Increasing
2016-05-20	Pomic	Pattern Oriented Modelling Information Criterion
2016-05-19	coenocliner	Coenocline Simulation
2016-05-19	CUSUMdesign	Compute Decision Interval and Average Run Length for CUSUM Charts
2016-05-19	lqr	Robust Linear Quantile Regression
2016-05-19	LSPFP	Lysate and Secretome Peptide Feature Plotter
2016-05-19	MetProc	Separate Metabolites into Likely Measurement Artifacts and True Metabolites
2016-05-19	weathermetrics	Functions to Convert Between Weather Metrics
2016-05-18	BaM	Functions and Datasets for Books by Jeff Gill
2016-05-18	gamlss.cens	Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions
2016-05-18	gamlss.mx	Fitting Mixture Distributions with GAMLSS
2016-05-18	gamlss.util	GAMLSS Utilities
2016-05-18	hht	The Hilbert-Huang Transform: Tools and Methods
2016-05-18	NCA	Necessary Condition Analysis
2016-05-18	popdemo	Demographic Modelling Using Projection Matrices
2016-05-18	saasCNV	Somatic Copy Number Alteration Analysis Using Sequencing and SNP Array Data
2016-05-18	tcpl	ToxCast Data Analysis Pipeline
2016-05-17	dnc	Dynamic Network Clustering
2016-05-17	RAppArmor	Bindings to AppArmor and Security Related Linux Tools
2016-05-17	robustloggamma	Robust Estimation of the Generalized log Gamma Model
2016-05-17	ThreeArmedTrials	Design and Analysis of Clinical Non-Inferiority or Superiority Trials with Active and Placebo Control
2016-05-16	addhaz	Binomial and Multinomial Additive Hazards Models
2016-05-16	clusterhap	Clustering Genotypes in Haplotypes
2016-05-16	cp4p	Calibration Plot for Proteomics
2016-05-16	LncPath	Identifying the Pathways Regulated by LncRNA Sets of Interest
2016-05-16	PhySortR	A Fast, Flexible Tool for Sorting Phylogenetic Trees
2016-05-16	pRSR	Test of Periodicity using Response Surface Regression
2016-05-16	saeRobust	Robust Small Area Estimation
2016-05-16	SimplicialCubature	Integration of Functions Over Simplices
2016-05-15	cystiSim	Agent-Based Model for Taenia_solium Transmission and Control
2016-05-15	ExomeDepth	Calls Copy Number Variants from Targeted Sequence Data
2016-05-15	Ryacas	R Interface to the Yacas Computer Algebra System
2016-05-14	equivalence	Provides Tests and Graphics for Assessing Tests of Equivalence
2016-05-14	lrmest	Different Types of Estimators to Deal with Multicollinearity
2016-05-14	RcmdrPlugin.MPAStats	R Commander Plug-in for MPA Statistics
2016-05-14	rollbar	Error Tracking and Logging
2016-05-14	SSL	Semi-Supervised Learning
2016-05-13	ada	The R Package Ada for Stochastic Boosting
2016-05-13	DengueRT	Parameter Estimates and Real-Time Prediction of a Single Dengue Outbreak
2016-05-13	HDInterval	Highest (Posterior) Density Intervals
2016-05-13	HMVD	Group Association Test using a Hidden Markov Model
2016-05-13	jaatha	Simulation-Based Maximum Likelihood Parameter Estimation
2016-05-13	MLmetrics	Machine Learning Evaluation Metrics
2016-05-13	RFormatter	R Source Code Formatter
2016-05-13	rjstat	Read and Write 'JSON-stat' Data Sets
2016-05-12	bartMachine	Bayesian Additive Regression Trees
2016-05-12	cruts	Interface to Climatic Research Unit Time-Series Version 3.21 Data
2016-05-12	march	Markov Chains
2016-05-12	mcga	Machine Coded Genetic Algorithms for Real-Valued Optimization Problems
2016-05-12	spTest	Nonparametric Hypothesis Tests of Isotropy and Symmetry
2016-05-11	genderizeR	Gender Prediction Based on First Names
2016-05-11	lambda.tools	Tools for Modeling Data with Functional Programming
2016-05-11	norm2	Analysis of Incomplete Multivariate Data under a Normal Model
2016-05-11	SetRank	Advanced Gene Set Enrichment Analysis
2016-05-11	sigora	Signature Overrepresentation Analysis
2016-05-10	assertive.datetimes	Assertions to Check Properties of Dates and Times
2016-05-10	assertive.files	Assertions to Check Properties of Files
2016-05-10	assertive.strings	Assertions to Check Properties of Strings
2016-05-10	base64	Base64 Encoder and Decoder
2016-05-10	CircNNTSR	Statistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models
2016-05-10	FeedbackTS	Analysis of Feedback in Time Series
2016-05-10	osc	Orthodromic Spatial Clustering
2016-05-10	rankhazard	Rank-Hazard Plots
2016-05-10	RcmdrPlugin.RMTCJags	R MTC Jags 'Rcmdr' Plugin
2016-05-10	splusTimeDate	Times and Dates from S-PLUS
2016-05-10	StratSel	Strategic Selection Estimator
2016-05-10	subdetect	Detect Subgroup with an Enhanced Treatment Effect
2016-05-09	assertive.numbers	Assertions to Check Properties of Numbers
2016-05-09	highr	Syntax Highlighting for R Source Code
2016-05-09	olctools	Open Location Code Handling in R
2016-05-09	sdnet	Soft-Discretization-Based Bayesian Network Inference
2016-05-08	concatenate	Human-Friendly Text from Unknown Strings
2016-05-08	Ecfun	Functions for Ecdat
2016-05-08	graphTweets	Visualise Twitter Interactions
2016-05-07	geozoo	Zoo of Geometric Objects
2016-05-07	LogicOpt	Truth Table Logic Optimizer
2016-05-07	nasadata	Interface to Various NASA API's
2016-05-07	ndtv	Network Dynamic Temporal Visualizations
2016-05-07	PenCoxFrail	Regularization in Cox Frailty Models
2016-05-06	lmem.gwaser	Linear Mixed Effects Models for Genome-Wide Association Studies
2016-05-05	multiwayvcov	Multi-Way Standard Error Clustering
2016-05-05	OjaNP	Multivariate Methods Based on the Oja Median and Related Concepts
2016-05-05	parsec	Partial Orders in Socio-Economics
2016-05-05	sld	Estimation and Use of the Quantile-Based Skew Logistic Distribution
2016-05-04	gepaf	Google Encoded Polyline Algorithm Format
2016-05-04	surveybootstrap	Tools for the Bootstrap with Survey Data
2016-05-03	ASSISTant	Adaptive Subgroup Selection in Group Sequential Trials
2016-05-03	qmap	Statistical Transformations for Post-Processing Climate Model Output
2016-05-03	recommenderlabJester	Jester Dataset for 'recommenderlab'
2016-05-03	SCI	Standardized Climate Indices Such as SPI, SRI or SPEI
2016-05-03	splusTimeSeries	Time Series from S-PLUS
2016-05-02	geoR	Analysis of Geostatistical Data
2016-05-02	highSCREEN	High Throughput Screening for Plate Based Essays
2016-05-02	imputePSF	Impute Missing Data in Time Series Data with PSF Based Method
2016-05-02	netcoh	Statistical Modeling with Network Cohesion
2016-05-02	quhomology	Calculation of Homology of Quandles, Racks, Biquandles and Biracks
2016-05-02	rasclass	Supervised Raster Image Classification
2016-05-02	rcorpora	A Collection of Small Text Corpora of Interesting Data
2016-05-02	shuffle	The Shuffle Estimator for Explainable Variance
2016-05-02	TippingPoint	Enhanced Tipping Point Displays the Results of Sensitivity Analyses for Missing Data
2016-05-01	DiscreteInverseWeibull	Discrete Inverse Weibull Distribution
2016-05-01	DiscreteLaplace	Discrete Laplace Distributions
2016-05-01	hetmeta	Heterogeneity Measures in Meta-Analysis
2016-05-01	ljr	Logistic Joinpoint Regression
2016-05-01	lvplot	Letter Value 'Boxplots'
2016-05-01	StressStrength	Computation and Estimation of Reliability of Stress-Strength Models
2016-04-30	IAT	Cleaning and Visualizing Implicit Association Test (IAT) Data
2016-04-30	pcIRT	IRT Models for Polytomous and Continuous Item Responses
2016-04-30	plac	A Pairwise Likelihood Augmented Cox Estimator for Left-Truncated Data
2016-04-29	ClusteredMutations	Location and Visualization of Clustered Somatic Mutations
2016-04-29	fastclime	A Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector
2016-04-29	googleformr	Collect Data Programmatically by POST Methods to Google Forms
2016-04-28	CalibrateSSB	Weighting and Estimation for Panel Data with Non-Response
2016-04-28	ClusterRankTest	Rank Tests for Clustered Data
2016-04-28	EpiWeek	Conversion Between Epidemiological Weeks and Calendar Dates
2016-04-28	ismev	An Introduction to Statistical Modeling of Extreme Values
2016-04-27	CDROM	Phylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data
2016-04-27	codyn	Community Dynamics Metrics
2016-04-27	CopyDetect	Computing Statistical Indices to Detect Answer Copying on Multiple-Choice Tests
2016-04-27	ggdendro	Create Dendrograms and Tree Diagrams Using 'ggplot2'
2016-04-27	NAEPprimer	The NAEP Primer
2016-04-27	pandocfilters	Pandoc Filters for R
2016-04-26	crsnls	Nonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe'
2016-04-26	nat.nblast	NeuroAnatomy Toolbox ('nat') Extension for Assessing Neuron Similarity and Clustering
2016-04-26	REREFACT	Reordering and/or Reflecting Factors for Simulation Studies with Exploratory Factor Analysis
2016-04-26	RZabbix	R Module for Working with the 'Zabbix API'
2016-04-26	TransferEntropy	The Transfer Entropy Package
2016-04-26	VecStatGraphs2D	Vector Analysis using Graphical and Analytical Methods in 2D
2016-04-26	VSURF	Variable Selection Using Random Forests
2016-04-25	beeswarm	The Bee Swarm Plot, an Alternative to Stripchart
2016-04-25	FinCovRegularization	Covariance Matrix Estimation and Regularization for Finance
2016-04-25	genomeplot	'Plot genome wide values for all chromosomes'
2016-04-25	MissingDataGUI	A GUI for Missing Data Exploration
2016-04-25	Rcsdp	R Interface to the CSDP Semidefinite Programming Library
2016-04-25	RobAStRDA	Interpolation Grids for Packages of the 'RobASt' - Family of Packages
2016-04-24	CEC	Cross-Entropy Clustering
2016-04-24	distrDoc	Documentation for 'distr' Family of R Packages
2016-04-24	humaniformat	A Parser for Human Names
2016-04-24	mlmc	Multi-Level Monte Carlo
2016-04-24	Rdsdp	R Interface to DSDP Semidefinite Programming Library
2016-04-24	sparsesvd	Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
2016-04-24	TELP	Social Representation Theory Application: The Free Evocation of Words Technique
2016-04-23	distrRmetrics	Distribution Classes for Distributions from Rmetrics
2016-04-23	distrSim	Simulation Classes Based on Package 'distr'
2016-04-23	distrTeach	Extensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School
2016-04-23	distrTEst	Estimation and Testing Classes Based on Package 'distr'
2016-04-23	DrugClust	Implementation of a Machine Learning Framework for Predicting Drugs Side Effects
2016-04-23	fdaPDE	Functional Data Analysis and Partial Differential Equations; Statistical Analysis of Functional and Spatial Data, Based on Regression with Partial Differential Regularizations
2016-04-23	IncucyteDRC	Dose Response Curves from Incucyte Proliferation Assays
2016-04-23	MeanShift	Clustering via the Mean Shift Algorithm
2016-04-23	Quandl	API Wrapper for Quandl.com
2016-04-22	aimPlot	Create Pie Like Plot for Completeness
2016-04-22	bridgedist	An Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003)
2016-04-22	edf	Read Data from European Data Format (EDF and EDF+) Files
2016-04-22	hextri	Hexbin Plots with Triangles
2016-04-22	tcR	Advanced Data Analysis of Immune Receptor Repertoires
2016-04-22	uHMM	Construct an Unsupervised Hidden Markov Model
2016-04-22	xkcdcolors	Color Names from the XKCD Color Survey
2016-04-21	EEM	Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data
2016-04-21	eyelinker	Load Raw Data from Eyelink Eye Trackers
2016-04-21	falcon	Finding Allele-Specific Copy Number in Next-Generation Sequencing Data
2016-04-21	rematch	Match Regular Expressions with a Nicer 'API'
2016-04-21	sdat	Signal Detection via Adaptive Test
2016-04-20	biotic	Calculation of Freshwater Biotic Indices
2016-04-20	rnpn	Interface to the National 'Phenology' Network 'API'
2016-04-19	capushe	CAlibrating Penalities Using Slope HEuristics
2016-04-19	clpAPI	R Interface to C API of COIN-OR Clp
2016-04-19	CountsEPPM	Mean and Variance Modeling of Count Data
2016-04-19	DidacticBoost	A Simple Implementation and Demonstration of Gradient Boosting
2016-04-19	disparityfilter	Disparity Filter Algorithm for Weighted Networks
2016-04-19	eba	Elimination-by-Aspects Models
2016-04-19	envlpaster	Enveloping the Aster Model
2016-04-19	ergm.ego	Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data
2016-04-19	ergm.rank	Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data
2016-04-19	flowr	Streamlining Design and Deployment of Complex Workflows
2016-04-19	funr	Simple Utility Providing Terminal Access to all R Functions
2016-04-19	lfe	Linear Group Fixed Effects
2016-04-19	multipleNCC	Weighted Cox-Regression for Nested Case-Control Data
2016-04-19	nbpMatching	Functions for Optimal Non-Bipartite Matching
2016-04-19	NlsyLinks	Utilities and Kinship Information for Research with the NLSY
2016-04-19	params	Simplify Parameters
2016-04-19	pks	Probabilistic Knowledge Structures
2016-04-19	prototest	Inference on Prototypes from Clusters of Features
2016-04-19	refnr	Refining Data Table Using a Set of Formulas
2016-04-19	simsalapar	Tools for Simulation Studies in Parallel
2016-04-19	StroupGLMM	R Codes and Datasets for Generalized Linear Mixed Models: Modern Concepts, Methods and Applications by Walter W. Stroup
2016-04-18	GoodmanKruskal	Association Analysis for Categorical Variables
2016-04-18	sgof	Multiple Hypothesis Testing
2016-04-16	convertGraph	Convert Graphical Files Format
2016-04-16	DOT	Render and Export DOT Graphs in R
2016-04-16	EGRETci	Exploration and Graphics for RivEr Trends (EGRET) Confidence Intervals
2016-04-16	keyplayer	Locating Key Players in Social Networks
2016-04-16	PAactivPAL	Summarize Daily Physical Activity from 'activPAL' Accelerometer Data
2016-04-16	solaR	Radiation and Photovoltaic Systems
2016-04-16	sprex	Calculate Species Richness and Extrapolation Metrics
2016-04-15	pact	Predictive Analysis of Clinical Trials
2016-04-15	tth	TeX to HTML/MathML Translators tth/ttm
2016-04-14	brranching	Fetch 'Phylogenies' from Many Sources
2016-04-14	reservoir	Tools for Analysis, Design, and Operation of Water Supply Storages
2016-04-13	DataCombine	Tools for Easily Combining and Cleaning Data Sets
2016-04-13	ebGenotyping	Genotyping and SNP Detection using Next Generation Sequencing Data
2016-04-13	ncf	Spatial Nonparametric Covariance Functions
2016-04-13	sde	Simulation and Inference for Stochastic Differential Equations
2016-04-13	stcov	Stein's Covariance Estimator
2016-04-12	asaur	Data Sets for "Applied Survival Analysis Using R""
2016-04-12	CNVassoc	Association Analysis of CNV Data and Imputed SNPs
2016-04-12	gencve	General Cross Validation Engine
2016-04-12	gmailr	Access the Gmail RESTful API
2016-04-12	hierarchicalSets	Set Data Visualization Using Hierarchies
2016-04-12	nlshrink	Non-Linear Shrinkage Estimation of Population Eigenvalues and Covariance Matrices
2016-04-12	progenyClust	Finding the Optimal Cluster Number Using Progeny Clustering
2016-04-12	psytabs	Produce Well-Formatted Tables for Psychological Research
2016-04-12	rYoutheria	Access to the YouTheria Mammal Trait Database
2016-04-11	ELT	Experience Life Tables
2016-04-11	PolyPatEx	Paternity Exclusion in Autopolyploid Species
2016-04-10	analogueExtra	Additional Functions for Use with the Analogue Package
2016-04-10	etma	Epistasis Test in Meta-Analysis
2016-04-10	GiNA	High Throughput Phenotyping
2016-04-10	greport	Graphical Reporting for Clinical Trials
2016-04-10	mgarchBEKK	Simulating, Estimating and Diagnosing MGARCH (BEKK and mGJR) Processes
2016-04-10	Sofi	Interfaz interactiva con fines didacticos
2016-04-09	DensParcorr	Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks
2016-04-09	DiallelAnalysisR	Diallel Analysis with R
2016-04-09	gds	Descriptive Statistics of Grouped Data
2016-04-09	Information	Data Exploration with Information Theory (Weight-of-Evidence and Information Value)
2016-04-09	investr	Inverse Estimation/Calibration Functions
2016-04-09	mateable	Tools to Assess Mating Potential in Space and Time
2016-04-09	rrefine	R Client for OpenRefine API
2016-04-08	biogeo	Point Data Quality Assessment and Coordinate Conversion
2016-04-08	braidReports	Visualize Combined Action Response Surfaces and Report BRAID Analyses
2016-04-08	hmm.discnp	Hidden Markov Models with Discrete Non-Parametric Observation Distributions
2016-04-08	RGA	A Google Analytics API Client
2016-04-07	AdvBinomApps	Upper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information
2016-04-07	glycanr	Tools for Analysing N-Glycan Data
2016-04-07	hypergeo	The Gauss Hypergeometric Function
2016-04-07	MixtureInf	Inference for Finite Mixture Models
2016-04-07	msir	Model-Based Sliced Inverse Regression
2016-04-07	palettetown	Use Pokemon Inspired Colour Palettes
2016-04-07	pogit	Bayesian Variable Selection for a Poisson-Logistic Model
2016-04-06	bayesboot	An Implementation of Rubin's (1981) Bayesian Bootstrap
2016-04-06	fbRads	Analyzing and Managing Facebook Ads from R
2016-04-06	haplo.stats	Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
2016-04-06	haplotyper	Tool for Clustering Genotypes in Haplotypes
2016-04-06	MixRF	A Random-Forest-Based Approach for Imputing Clustered Incomplete Data
2016-04-06	PhysActBedRest	Marks Periods of 'Bedrest' in Actigraph Accelerometer Data
2016-04-06	pop.wolf	Models for Simulating Wolf Populations
2016-04-06	RNeo4j	Neo4j Driver for R
2016-04-05	archdata	Example Datasets from Archaeological Research
2016-04-05	decision	Statistical Decision Analysis
2016-04-05	fromo	Fast Robust Moments
2016-04-05	gelnet	Generalized Elastic Nets
2016-04-05	MHTrajectoryR	Bayesian Model Selection in Logistic Regression for the Detection of Adverse Drug Reactions
2016-04-05	PCPS	Principal Coordinates of Phylogenetic Structure
2016-04-05	vhica	Vertical and Horizontal Inheritance Consistence Analysis
2016-04-04	argparser	Command-Line Argument Parser
2016-04-04	BayesH	Bayesian Regression Model with Mixture of Two Scaled Inverse Chi Square as Hyperprior
2016-04-04	bpa	Basic Pattern Analysis
2016-04-04	cardioModel	Cardiovascular Safety Exposure-Response Modeling in Early-Phase Clinical Studies
2016-04-04	emov	Eye Movement Analysis Package for Fixation and Saccade Detection
2016-04-04	iopsych	Methods for Industrial/Organizational Psychology
2016-04-04	iptools	Manipulate, Validate and Resolve 'IP' Addresses
2016-04-04	LexisPlotR	Plot Lexis Diagrams for Demographic Purposes
2016-04-04	pipeR	Multi-Paradigm Pipeline Implementation
2016-04-04	QPot	Quasi-Potential Analysis for Stochastic Differential Equations
2016-04-04	rlist	A Toolbox for Non-Tabular Data Manipulation
2016-04-03	cancerTiming	Estimation of Temporal Ordering of Cancer Abnormalities
2016-04-03	diskImageR	A Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays
2016-04-03	mistral	Methods in Structural Reliability Analysis
2016-04-03	mvcluster	Multi-View Clustering
2016-04-03	pergola	Toolbox for Polyploid Genetic Data
2016-04-03	RevEcoR	Reverse Ecology Analysis on Microbiome
2016-04-03	rusda	Interface to USDA Databases
2016-04-03	waterfall	Waterfall Charts
2016-04-03	WiSEBoot	Wild Scale-Enhanced Bootstrap
2016-04-02	agrmt	Calculate Agreement or Consensus in Ordered Rating Scales
2016-04-02	WHO	R Client for the World Health Organization API
2016-04-01	ArgumentCheck	Improved Communication to Users with Respect to Problems in Function Arguments
2016-04-01	cancerGI	Analyses of Cancer Gene Interaction
2016-04-01	DIRECT	Bayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior
2016-04-01	FUNTA	Functional Tangential Angle Pseudo-Depth
2016-04-01	leafletR	Interactive Web-Maps Based on the Leaflet JavaScript Library
2016-04-01	popbio	Construction and Analysis of Matrix Population Models
2016-04-01	quantreg.nonpar	Nonparametric Series Quantile Regression
2016-04-01	soql	Helps Make Socrata Open Data API Calls
2016-03-31	Biograph	Explore Life Histories
2016-03-31	calACS	Calculations for All Common Subsequences
2016-03-31	collUtils	Auxiliary Package for Package 'CollapsABEL'
2016-03-31	doBy	Groupwise Statistics, LSmeans, Linear Contrasts, Utilities
2016-03-31	IntClust	Integrated Data Analysis via Clustering
2016-03-31	processcontrol	Statistical Process Control Charts
2016-03-31	RObsDat	Data Management for Hydrology and Beyond Using the Observations Data Model
2016-03-30	bdpopt	Optimisation of Bayesian Decision Problems
2016-03-30	breakaway	Species Richness Estimation and Modeling
2016-03-30	EDISON	Network Reconstruction and Changepoint Detection
2016-03-30	FMsmsnReg	Regression Models with Finite Mixtures of Skew Heavy-Tailed Errors
2016-03-30	ForeCA	Forecastable Component Analysis
2016-03-30	GOplot	Visualization of Functional Analysis Data
2016-03-30	gplots	Various R Programming Tools for Plotting Data
2016-03-30	relimp	Relative Contribution of Effects in a Regression Model
2016-03-30	setter	Mutators that Work with Pipes
2016-03-30	TDboost	A Boosted Tweedie Compound Poisson Model
2016-03-30	tdROC	Nonparametric Estimation of Time-Dependent ROC Curve from Right Censored Survival Data
2016-03-29	CrossClustering	A Partial Clustering Algorithm with Automatic Estimation of the Number of Clusters and Identification of Outliers
2016-03-29	densratio	Density Ratio Estimation
2016-03-29	ergm.count	Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
2016-03-29	growthcurver	Simple Metrics to Summarize Growth Curves
2016-03-29	gsbDesign	Group Sequential Bayes Design
2016-03-29	imguR	An Imgur.com API Client Package
2016-03-29	LambertW	Probabilistic Models to Analyze and Gaussianize Heavy-Tailed, Skewed Data
2016-03-29	randstr	Generate Random Strings
2016-03-29	RNewsflow	Tools for Analyzing Content Homogeneity and News Diffusion using Computational Text Analysis
2016-03-29	robustETM	Robust Methods using Exponential Tilt Model
2016-03-29	svmadmm	Linear/Nonlinear SVM Classification Solver Based on ADMM and IADMM Algorithms
2016-03-29	tttplot	Time to Target Plot
2016-03-28	EffectLiteR	Average and Conditional Effects
2016-03-28	Greg	Regression Helper Functions
2016-03-28	needs	Attaches and Installs Packages
2016-03-28	NPC	Nonparametric Combination of Hypothesis Tests
2016-03-28	quantspec	Quantile-Based Spectral Analysis of Time Series
2016-03-28	rappdirs	Application Directories: Determine Where to Save Data, Caches, and Logs
2016-03-28	SmarterPoland	Tools for Accessing Various Datasets Developed by the Foundation SmarterPoland.pl
2016-03-27	RobPer	Robust Periodogram and Periodicity Detection Methods
2016-03-27	Tariff	Replicate Tariff Method for Verbal Autopsy
2016-03-26	betalink	Beta-Diversity of Species Interactions
2016-03-26	kknn	Weighted k-Nearest Neighbors
2016-03-26	NEpiC	Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals
2016-03-26	seqtest	Sequential Triangular Test
2016-03-26	sSDR	Tools Developed for Structured Sufficient Dimension Reduction (sSDR)
2016-03-26	tailDepFun	Minimum Distance Estimation of Tail Dependence Models
2016-03-26	ZillowR	R Interface to Zillow Real Estate and Mortgage Data API
2016-03-25	censorcopula	Estimate Parameter of Bivariate Copula
2016-03-25	DataClean	Data Cleaning
2016-03-25	ggnetwork	Geometries to Plot Networks with 'ggplot2'
2016-03-25	Newdistns	Computes Pdf, Cdf, Quantile and Random Numbers, Measures of Inference for 19 General Families of Distributions
2016-03-25	nlWaldTest	Wald Test of Nonlinear Restrictions and Nonlinear CI
2016-03-25	tsna	Tools for Temporal Social Network Analysis
2016-03-24	DNAseqtest	Generating and Testing DNA Sequences
2016-03-24	kza	Kolmogorov-Zurbenko Adaptive Filters
2016-03-24	rollply	Moving-Window Add-on for 'plyr'
2016-03-24	wkb	Convert Between Spatial Objects and Well-Known Binary Geometry
2016-03-23	directPA	Direction Analysis for Pathways and Kinases
2016-03-23	ffbase	Basic Statistical Functions for Package 'ff'
2016-03-23	permubiome	A Permutation Based Test for Biomarker Discovery in Microbiome Data
2016-03-23	WrightMap	IRT Item-Person Map with 'ConQuest' Integration
2016-03-22	clere	Simultaneous Variables Clustering and Regression
2016-03-22	MGGM	Structural Pursuit Over Multiple Undirected Graphs
2016-03-22	password	Create Random Passwords
2016-03-22	sparseSVM	Solution Paths of Sparse Linear Support Vector Machine with Lasso or ELastic-Net Regularization
2016-03-22	vegalite	Tools to Encode Visualizations with the 'Grammar of Graphics'-Like 'Vega-Lite' 'Spec'
2016-03-21	getMet	Get Meteorological Data for Hydrologic Models
2016-03-21	hdi	High-Dimensional Inference
2016-03-21	MonetDB.R	Connect MonetDB to R
2016-03-21	TwoStepCLogit	Conditional Logistic Regression: A Two-Step Estimation Method
2016-03-21	VSE	Variant Set Enrichment
2016-03-19	commentr	Print Nicely Formatted Comments for Use in Script Files
2016-03-19	edgebundleR	Circle Plot with Bundled Edges
2016-03-19	EMMAgeo	End-Member Modelling of Grain-Size Data
2016-03-19	interpretR	Binary Classifier and Regression Model Interpretation Functions
2016-03-19	KScorrect	Lilliefors-Corrected Kolmogorov-Smirnoff Goodness-of-Fit Tests
2016-03-19	rfml	MarkLogic NoSQL Database Server in-Database Analytics for R
2016-03-19	vitality	Fitting Routines for the Vitality Family of Mortality Models
2016-03-18	ecb	Programmatic Access to the European Central Bank's Statistical Data Warehouse (SDW)
2016-03-18	hyphenatr	Tools to Hyphenate Strings Using the 'Hunspell' Hyphenation Library
2016-03-18	MiSPU	Microbiome Based Sum of Powered Score (MiSPU) Tests
2016-03-18	QRM	Provides R-Language Code to Examine Quantitative Risk Management Concepts
2016-03-18	rechonest	R Interface to Echo Nest API
2016-03-18	selection	Correcting Biased Estimates Under Selection
2016-03-18	vottrans	Voter Transition Analysis
2016-03-17	bdscale	Remove Weekends and Holidays from ggplot2 Axes
2016-03-17	bssn	Birnbaum-Saunders Model Based on Skew-Normal Distribution
2016-03-17	eyetrackingR	Eye-Tracking Data Analysis
2016-03-17	housingData	U.S. Housing Data from 2008 to 2016
2016-03-17	RFgroove	Importance Measure and Selection for Groups of Variables with Random Forests
2016-03-17	rscimark	SciMark 2.0 Benchmark for Scientific and Numerical Computing
2016-03-17	RSMET	Get Real-Time Meteorological Data in SMET Format
2016-03-17	TwoPhaseInd	Estimate Gene-Treatment Interaction Exploiting Randomization
2016-03-17	WaterML	Fetch and Analyze Data from 'WaterML' and 'WaterOneFlow' Web Services
2016-03-16	bayesGDS	Scalable Rejection Sampling for Bayesian Hierarchical Models
2016-03-16	dendrometeR	Analyzing Dendrometer Data
2016-03-16	edgeCorr	Spatial Edge Correction
2016-03-16	qrjoint	Joint Estimation in Linear Quantile Regression
2016-03-16	ROpenWeatherMap	R Interface to OpenWeatherMap API
2016-03-16	SCGLR	Supervised Component Generalized Linear Regression
2016-03-16	siplab	Spatial Individual-Plant Modelling
2016-03-15	cati	Community Assembly by Traits: Individuals and Beyond
2016-03-15	DEMOVA	DEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set
2016-03-15	NBDdirichlet	NBD-Dirichlet Model of Consumer Buying Behavior for Marketing Research
2016-03-15	RADanalysis	Normalization and Study of Rank Abundance Distributions
2016-03-15	rivr	Steady and Unsteady Open-Channel Flow Computation
2016-03-14	DandEFA	Dandelion Plot for R-Mode Exploratory Factor Analysis
2016-03-14	iWISA	Wavelet-Based Index of Storm Activity
2016-03-14	logisticPCA	Binary Dimensionality Reduction
2016-03-14	rdd	Regression Discontinuity Estimation
2016-03-14	RMediation	Mediation Analysis Confidence Intervals
2016-03-14	RODBCDBI	Provides Access to Databases Through the ODBC Interface
2016-03-14	SharpeR	Statistical Significance of the Sharpe Ratio
2016-03-14	shinyAce	Ace Editor Bindings for Shiny
2016-03-13	pendensity	Density Estimation with a Penalized Mixture Approach
2016-03-12	coarseDataTools	A Collection of Functions to Help with Analysis of Coarsely Observed Data
2016-03-12	cocron	Statistical Comparisons of Two or more Alpha Coefficients
2016-03-12	dclone	Data Cloning and MCMC Tools for Maximum Likelihood Methods
2016-03-12	dcmle	Hierarchical Models Made Easy with Data Cloning
2016-03-12	fermicatsR	Fermi Large Area Telescope Catalogs
2016-03-12	lazysql	Lazy SQL Programming
2016-03-12	mdsdt	Functions for Analysis of Data with General Recognition Theory
2016-03-12	Pijavski	Global Univariate Minimization
2016-03-12	PVAClone	Population Viability Analysis with Data Cloning
2016-03-11	Dowd	Functions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk
2016-03-11	dynamicTreeCut	Methods for Detection of Clusters in Hierarchical Clustering Dendrograms
2016-03-11	SASxport	Read and Write 'SAS' 'XPORT' Files
2016-03-10	ACA	Abrupt Change-Point or Aberration Detection in Point Series
2016-03-10	DCODE	List Linear n-Peptide Constraints for Overlapping Protein Regions
2016-03-10	ngramrr	A Simple General Purpose N-Gram Tokenizer
2016-03-10	nnlasso	Non-Negative Lasso and Elastic Net Penalized Generalized Linear Models
2016-03-10	osd	Orthogonal Signal Deconvolution for Spectra Deconvolution in GC-MS and GCxGC-MS Data
2016-03-10	rARPACK	Solvers for Large Scale Eigenvalue and SVD Problems
2016-03-10	sparsereg	Sparse Bayesian Models for Regression, Subgroup Analysis, and Panel Data
2016-03-10	tsintermittent	Intermittent Time Series Forecasting
2016-03-09	BBEST	Bayesian Estimation of Incoherent Neutron Scattering Backgrounds
2016-03-09	carcass	Estimation of the Number of Fatalities from Carcass Searches
2016-03-09	digitalPCR	Estimate Copy Number for Digital PCR
2016-03-09	FCNN4R	Fast Compressed Neural Networks for R
2016-03-09	glcm	Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs)
2016-03-09	NIPTeR	Fast and Accurate Trisomy Prediction in Non-Invasive Prenatal Testing
2016-03-09	regsel	Variable Selection and Regression
2016-03-09	shrink	Global, Parameterwise and Joint Shrinkage Factor Estimation
2016-03-08	braidrm	Fitting Dose Response with the BRAID Combined Action Model
2016-03-08	mbest	Moment-Based Estimation for Hierarchical Models
2016-03-08	OmicKriging	Poly-Omic Prediction of Complex TRaits
2016-03-08	ProbitSpatial	Probit with Spatial Dependence, SAR and SEM Models
2016-03-08	scrubr	Clean Biological Occurrence Records
2016-03-07	ccaPP	(Robust) Canonical Correlation Analysis via Projection Pursuit
2016-03-07	ComICS	Computational Methods for Immune Cell-Type Subsets
2016-03-07	conformal	Conformal Prediction for Regression and Classification
2016-03-07	dpmr	Data Package Manager for R
2016-03-07	lmms	Linear Mixed Effect Model Splines for Modelling and Analysis of Time Course Data
2016-03-07	modes	Find the Modes and Assess the Modality of Complex and Mixture Distributions, Especially with Big Datasets
2016-03-06	jrich	Jack-Knife Support for Evolutionary Distinctiveness Indices I and W
2016-03-05	kmlShape	K-Means for Longitudinal Data using Shape-Respecting Distance
2016-03-05	palinsol	Insolation for Palaeoclimate Studies
2016-03-04	cdom	R Functions to Model CDOM Spectra
2016-03-04	hda	Heteroscedastic Discriminant Analysis
2016-03-04	Mondrian	A Simple Graphical Representation of the Relative Occurrence and Co-Occurrence of Events
2016-03-04	nlmrt	Functions for Nonlinear Least Squares Solutions
2016-03-04	resemble	Regression and Similarity Evaluation for Memory-Based Learning in Spectral Chemometrics
2016-03-03	detect	Analyzing Wildlife Data with Detection Error
2016-03-03	karaoke	Remove Vocals from a Song
2016-03-03	lettercase	Utilities for Formatting Strings with Consistent Capitalization, Word Breaks and White Space
2016-03-03	lordif	Logistic Ordinal Regression Differential Item Functioning using IRT
2016-03-03	ProteinDescriptors	Generates Various Protein Descriptors for Machine Learning Algorithms
2016-03-03	RGraphics	Data and Functions from the Book R Graphics, Second Edition
2016-03-03	signalHsmm	Predict Presence of Signal Peptides
2016-03-03	wrswoR	Weighted Random Sampling without Replacement
2016-03-02	GAMens	Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification
2016-03-02	lxb	Fast LXB File Reader
2016-03-02	MANCIE	Matrix Analysis and Normalization by Concordant Information Enhancement
2016-03-02	modQR	Multiple-Output Directional Quantile Regression
2016-03-02	pems.utils	Portable Emissions (and Other Mobile) Measurement System Utilities
2016-03-02	Rearrangement	Monotonize Point and Interval Functional Estimates by Rearrangement
2016-03-02	spiders	Fits Predator Preferences Model
2016-03-01	biomod2	Ensemble Platform for Species Distribution Modeling
2016-03-01	cymruservices	Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services
2016-03-01	OTRselect	Variable Selection for Optimal Treatment Decision
2016-02-29	cocorresp	Co-Correspondence Analysis Methods
2016-02-29	LRTH	A Likelihood Ratio Test Accounting for Genetic Heterogeneity
2016-02-29	pequod	Moderated Regression Package
2016-02-29	planar	Multilayer Optics
2016-02-29	PWD	Time Series Regression Using the Power Weighted Densities (PWD) Approach
2016-02-29	RCA	Relational Class Analysis
2016-02-29	RFmarkerDetector	Multivariate Analysis of Metabolomics Data using Random Forests
2016-02-29	RYandexTranslate	R Interface to Yandex Translate API
2016-02-29	spikeSlabGAM	Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models
2016-02-29	tmpm	Trauma Mortality Prediction Model
2016-02-29	Weighted.Desc.Stat	Weighted Descriptive Statistics
2016-02-28	analogue	Analogue and Weighted Averaging Methods for Palaeoecology
2016-02-28	COUSCOus	A Residue-Residue Contact Detecting Method
2016-02-28	fastAdaboost	a Fast Implementation of Adaboost
2016-02-28	TestScorer	GUI for Entering Test Items and Obtaining Raw and Transformed Scores
2016-02-28	varian	Variability Analysis in R
2016-02-27	bartMachineJARs	bartMachine JARs
2016-02-27	BKPC	Bayesian Kernel Projection Classifier
2016-02-27	repolr	Repeated Measures Proportional Odds Logistic Regression
2016-02-26	gtable	Arrange 'Grobs' in Tables
2016-02-26	MRH	Multi-Resolution Estimation of the Hazard Rate
2016-02-25	apt	Asymmetric Price Transmission
2016-02-25	CryptRndTest	Statistical Tests for Cryptographic Randomness
2016-02-25	erer	Empirical Research in Economics with R
2016-02-25	Evomorph	Evolutionary Morphometric Simulation
2016-02-25	livechatR	R Wrapper for LiveChat REST API
2016-02-25	luzlogr	Lightweight Logging for R Scripts
2016-02-25	MM2S	Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
2016-02-25	PBImisc	A Set of Datasets Used in My Classes or in the Book 'Modele Liniowe i Mieszane w R, Wraz z Przykladami w Analizie Danych'
2016-02-25	perARMA	Periodic Time Series Analysis
2016-02-25	qqtest	Self Calibrating Quantile-Quantile Plots for Visual Testing
2016-02-25	WACS	Multivariate Weather-State Approach Conditionally Skew-Normal Generator
2016-02-25	wfg	Weighted Fast Greedy Algorithm
2016-02-24	CONDOP	Condition-Dependent Operon Predictions
2016-02-24	GiRaF	Gibbs Random Fields Analysis
2016-02-24	qualityTools	Statistical Methods for Quality Science
2016-02-23	d3heatmap	Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
2016-02-23	DetR	Suite of Deterministic and Robust Algorithms for Linear Regression
2016-02-23	linERR	Linear Excess Relative Risk Model
2016-02-23	permGPU	Using GPUs in Statistical Genomics
2016-02-23	prevR	Estimating Regional Trends of a Prevalence from a DHS
2016-02-23	scs	Splitting Conic Solver
2016-02-23	sensory	Simultaneous Model-Based Clustering and Imputation via a Progressive Expectation-Maximization Algorithm
2016-02-23	WikiSocio	A MediaWiki API Wrapper
2016-02-22	depmix	Dependent Mixture Models
2016-02-22	Lmoments	L-Moments and Quantile Mixtures
2016-02-22	lrequire	Sources an R "Module" with Caching & Encapsulation, Returning Exported Vars
2016-02-22	MuViCP	MultiClass Visualizable Classification using Combination of Projections
2016-02-22	spnet	Plotting (Social) Networks on Maps
2016-02-22	sprm	Sparse and Non-Sparse Partial Robust M Regression and Classification
2016-02-21	ChannelAttributionApp	Shiny Web Application for the Multichannel Attribution Problem
2016-02-21	epinet	Epidemic/Network-Related Tools
2016-02-21	md	Selecting Bandwidth for Kernel Density Estimator with Minimum Distance Method
2016-02-21	mptools	RAMAS Metapop Tools
2016-02-21	vudc	Visualization of Univariate Data for Comparison
2016-02-19	clttools	Central Limit Theorem Experiments (Theoretical and Simulation)
2016-02-19	geoaxe	Split 'Geospatial' Objects into Pieces
2016-02-19	inegiR	Integrate INEGI’s (Mexican Stats Office) API with R
2016-02-19	rfisheries	'Programmatic Interface to the 'openfisheries.org' API'
2016-02-19	rjags	Bayesian Graphical Models using MCMC
2016-02-19	variables	Variable Descriptions
2016-02-18	biganalytics	Utilities for 'big.matrix' Objects from Package 'bigmemory'
2016-02-18	bigtabulate	Table, Apply, and Split Functionality for Matrix and 'big.matrix' Objects
2016-02-18	Familias	Probabilities for Pedigrees Given DNA Data
2016-02-18	microbats	An Implementation of Bat Algorithm in R
2016-02-18	minimap	Create Tile Grid Maps
2016-02-18	openNLP	Apache OpenNLP Tools Interface
2016-02-17	calibrar	Automated Parameter Estimation for Complex (Ecological) Models
2016-02-17	GGEBiplotGUI	Interactive GGE Biplots in R
2016-02-17	Libra	Linearized Bregman Algorithms for Generalized Linear Models
2016-02-17	LLSR	Data Analysis of Liquid-Liquid Systems
2016-02-17	ncappc	NCA Calculation and Population PK Model Diagnosis
2016-02-17	scenario	Construct Reduced Trees with Predefined Nodal Structures
2016-02-17	synchronicity	Boost Mutex Functionality in R
2016-02-17	VisuClust	Visualisation of Clusters in Multivariate Data
2016-02-16	designGLMM	Finding Optimal Block Designs for a Generalised Linear Mixed Model
2016-02-16	kml	K-Means for Longitudinal Data
2016-02-16	longitudinalData	Longitudinal Data
2016-02-16	R.methodsS3	S3 Methods Simplified
2016-02-15	alphahull	Generalization of the Convex Hull of a Sample of Points in the Plane
2016-02-15	depmixS4	Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
2016-02-15	faraway	Functions and Datasets for Books by Julian Faraway
2016-02-15	fractional	Vulgar Fractions in R
2016-02-15	noncompliance	Causal Inference in the Presence of Treatment Noncompliance Under the Binary Instrumental Variable Model
2016-02-15	pdftables	Programmatic Conversion of PDF Tables
2016-02-14	geotech	Geotechnical Engineering
2016-02-14	GrammR	Graphical Representation and Modeling of Metagenomic Reads
2016-02-14	ipfp	Fast Implementation of the Iterative Proportional Fitting Procedure in C
2016-02-13	BonEV	An Improved Multiple Testing Procedure for Controlling False Discovery Rates
2016-02-13	MSG	Data and Functions for the Book Modern Statistical Graphics
2016-02-13	munsell	Utilities for Using Munsell Colours
2016-02-13	TransP	Implementation of Transportation Problem Algorithms
2016-02-12	FCMapper	Fuzzy Cognitive Mapping
2016-02-12	MCMC.OTU	Bayesian Analysis of Multivariate Counts Data in DNA Metabarcoding and Ecology
2016-02-12	TeachingDemos	Demonstrations for Teaching and Learning
2016-02-12	WaverR	Data Estimation using Weighted Averages of Multiple Regressions
2016-02-12	weights	Weighting and Weighted Statistics
2016-02-11	BGPhazard	Markov Beta and Gamma Processes for Modeling Hazard Rates
2016-02-11	emdbook	Support Functions and Data for "Ecological Models and Data"
2016-02-11	ionr	Test for Indifference of Indicator
2016-02-11	spacom	Spatially Weighted Context Data for Multilevel Modelling
2016-02-11	starma	Modelling Space Time AutoRegressive Moving Average (STARMA) Processes
2016-02-11	titrationCurves	Acid/Base, Complexation, Redox, and Precipitation Titration Curves
2016-02-10	blockseg	Two Dimensional Change-Points Detection
2016-02-10	EBMAforecast	Ensemble BMA Forecasting
2016-02-10	exploreR	Tools for Quickly Exploring Data
2016-02-10	mvnTest	Goodness of Fit Tests for Multivariate Normality
2016-02-10	pan	Multiple Imputation for Multivariate Panel or Clustered Data
2016-02-10	tikzDevice	R Graphics Output in LaTeX Format
2016-02-09	cooccur	Probabilistic Species Co-Occurrence Analysis in R
2016-02-09	FMP	Filtered Monotonic Polynomial IRT Models
2016-02-09	latticeExtra	Extra Graphical Utilities Based on Lattice
2016-02-09	loe	Local Ordinal Embedding
2016-02-09	NPBayesImpute	Non-Parametric Bayesian Multiple Imputation for Categorical Data
2016-02-09	soc.ca	Specific Correspondence Analysis for the Social Sciences
2016-02-09	Watersheds	Spatial Watershed Aggregation and Spatial Drainage Network Analysis
2016-02-08	ClusterStability	Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions
2016-02-08	guess	Adjust Estimates of Learning for Guessing
2016-02-08	munfold	Metric Unfolding
2016-02-08	rmp	Rounded Mixture Package. Performs Probability Mass Function Estimation with Nonparametric Mixtures of Rounded Kernels
2016-02-08	spgrass6	Interface Between GRASS 6+ Geographical Information System and R
2016-02-08	yCrypticRNAs	Cryptic Transcription Analysis in Yeast
2016-02-07	bayesDccGarch	The Bayesian Dynamic Conditional Correlation GARCH Model
2016-02-07	Bmix	Bayesian Sampling for Stick-Breaking Mixtures
2016-02-07	caretEnsemble	Ensembles of Caret Models
2016-02-07	midastouch	Multiple Imputation by Distance Aided Donor Selection
2016-02-07	MixedDataImpute	Missing Data Imputation for Continuous and Categorical Data using Nonparametric Bayesian Joint Models
2016-02-07	mpbart	Multinomial Probit Bayesian Additive Regression Trees
2016-02-07	repmis	Miscellaneous Tools for Reproducible Research
2016-02-07	RLogicalOps	Process Logical Operations
2016-02-07	tgp	Bayesian Treed Gaussian Process Models
2016-02-07	tufte	Tufte's Styles for R Markdown Documents
2016-02-06	LOGIT	Functions, Data and Code for Binary and Binomial Data
2016-02-05	DRaWR	Discriminative Random Walk with Restart
2016-02-05	rdian	Client Library for The Guardian
2016-02-05	TEQR	Target Equivalence Range Design
2016-02-05	WikipediaR	R-Based Wikipedia Client
2016-02-05	xtable	Export Tables to LaTeX or HTML
2016-02-04	ABCp2	Approximate Bayesian Computational Model for Estimating P2
2016-02-04	ABHgenotypeR	Easy Visualization of ABH Genotypes
2016-02-04	DiagrammeRsvg	Export DiagrammeR Graphviz Graphs as SVG
2016-02-04	elexr	Load Associated Press Election Results with Elex
2016-02-04	epandist	Statistical Functions for the Censored and Uncensored Epanechnikov Distribution
2016-02-04	IFP	Identifying Functional Polymorphisms
2016-02-04	Sky	Canopy Openness Analyzer Package
2016-02-04	tumgr	Tumor Growth Rate Analysis
2016-02-03	logspline	Logspline Density Estimation Routines
2016-02-03	lqmm	Linear Quantile Mixed Models
2016-02-03	rworldmap	Mapping Global Data
2016-02-03	sgeostat	An Object-Oriented Framework for Geostatistical Modeling in S+
2016-02-03	tensr	Covariance Inference and Decompositions for Tensor Datasets
2016-02-02	FastGP	Efficiently Using Gaussian Processes with Rcpp and RcppEigen
2016-02-02	GGMridge	Gaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation
2016-02-02	graticule	Meridional and Parallel Lines for Maps
2016-02-02	nnet	Feed-Forward Neural Networks and Multinomial Log-Linear Models
2016-02-02	patPRO	Visualizing Temporal Microbiome Data
2016-02-02	quantileDA	Quantile Classifier
2016-02-01	acid	Analysing Conditional Income Distributions
2016-02-01	cmprskQR	Analysis of Competing Risks Using Quantile Regressions
2016-02-01	exreport	Fast, Reliable and Elegant Reproducible Research
2016-02-01	gsDesign	Group Sequential Design
2016-02-01	murphydiagram	Murphy Diagrams for Forecast Comparisons
2016-02-01	scorer	Quickly Score Models in Data Science and Machine Learning
2016-01-31	backblazer	Bindings to the Backblaze B2 API
2016-01-31	psoptim	Particle Swarm Optimization
2016-01-31	regpro	Nonparametric Regression
2016-01-31	tripEstimation	Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes
2016-01-30	asymLD	Asymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data
2016-01-30	cepp	Context Driven Exploratory Projection Pursuit
2016-01-30	EBglmnet	Empirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models
2016-01-30	StockChina	Real-Time Stock Price & Volume in China Market
2016-01-30	wildpoker	Best Hand Analysis for Poker Variants Including Wildcards
2016-01-30	zooaRch	Analytical Tools for Zooarchaeological Data
2016-01-29	bqtl	Bayesian QTL Mapping Toolkit
2016-01-29	IMP	Interactive Model Performance Evaluation
2016-01-29	SpatialEpi	Methods and Data for Spatial Epidemiology
2016-01-28	covsep	Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable
2016-01-28	sscor	Robust Correlation Estimation and Testing Based on Spatial Signs
2016-01-27	LaplaceDeconv	Laplace Deconvolution with Noisy Discrete Non-Equally Spaced Observations on a Finite Time Interval
2016-01-27	wBoot	Bootstrap Methods
2016-01-26	brnn	Bayesian Regularization for Feed-Forward Neural Networks
2016-01-26	distance.sample.size	Calculates Study Size Required for Distance Sampling
2016-01-26	pdolsms	Panel Dynamic OLS Estimation of Cointegrating Vectors
2016-01-26	R2GUESS	Wrapper Functions for GUESS
2016-01-26	SteinIV	Semi-Parametric Stein-Like Estimator with Instrumental Variables
2016-01-25	surveyoutliers	Helps Manage Outliers in Sample Surveys
2016-01-24	labdsv	Ordination and Multivariate Analysis for Ecology
2016-01-24	medicalrisk	Medical Risk and Comorbidity Tools for ICD-9-CM Data
2016-01-24	VertexSimilarity	Creates Vertex Similarity Matrix for an Undirected Graph
2016-01-23	AsynchLong	Regression Analysis of Sparse Asynchronous Longitudinal Data
2016-01-23	fSRM	Social Relations Analyses with Roles ("Family SRM")
2016-01-23	ggmap	Spatial Visualization with ggplot2
2016-01-23	ramsvm	Reinforced Angle-Based Multicategory Support Vector Machines
2016-01-23	webreadr	Tools for Reading Formatted Access Log Files
2016-01-22	DYM	Did You Mean?
2016-01-22	netgen	Network Generator for Combinatorial Graph Problems
2016-01-22	RcppDE	Global Optimization by Differential Evolution in C++
2016-01-21	FreqProf	Frequency Profiles Computing and Plotting
2016-01-21	sclero	Measure Growth Patterns and Align Sampling Spots in Photographs
2016-01-21	tree	Classification and Regression Trees
2016-01-20	cbsodataR	Statistics Netherlands (CBS) Open Data API Client
2016-01-20	corclass	Correlational Class Analysis
2016-01-20	extremevalues	Univariate Outlier Detection
2016-01-20	miCoPTCM	Promotion Time Cure Model with Mis-Measured Covariates
2016-01-20	RVPedigree	Methods for Family-Based Rare-Variant Genetic Association Tests
2016-01-19	AmpliconDuo	Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts
2016-01-19	igraphinshiny	Use 'shiny' to Demo 'igraph'
2016-01-19	pAnalysis	Benchmarking and Rescaling R2 using Noise Percentile Analysis
2016-01-19	SemiMarkov	Multi-States Semi-Markov Models
2016-01-19	simmr	A Stable Isotope Mixing Model
2016-01-19	SNscan	Scan Statistics in Social Networks
2016-01-19	SubpathwayLNCE	Identify Signal Subpathways Competitively Regulated by LncRNAs Based on ceRNA Theory
2016-01-18	assortnet	Calculate the Assortativity Coefficient of Weighted and Binary Networks
2016-01-18	CepLDA	Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability
2016-01-18	cycleRtools	Tools for Cycling Data Analysis
2016-01-18	OceanView	Visualisation of Oceanographic Data and Model Output
2016-01-18	ph2bayes	Bayesian Single-Arm Phase II Designs
2016-01-18	plot3Drgl	Plotting Multi-Dimensional Data - Using 'rgl'
2016-01-18	rpcdsearch	Tools for the Construction of Clinical Code Lists for Primary Care Database Studies
2016-01-17	freqparcoord	Novel Methods for Parallel Coordinates
2016-01-17	OECD	Search and Extract Data from the OECD
2016-01-16	mldr	Exploratory Data Analysis and Manipulation of Multi-Label Data Sets
2016-01-16	OriGen	Fast Spatial Ancestry via Flexible Allele Frequency Surfaces
2016-01-16	visualFields	Statistical Methods for Visual Fields
2016-01-15	Actigraphy	Actigraphy Data Analysis
2016-01-15	DescribeDisplay	An Interface to the DescribeDisplay GGobi Plugin
2016-01-15	FDRsampsize	Compute Sample Size that Meets Requirements for Average Power and FDR
2016-01-15	HKprocess	Hurst-Kolmogorov Process
2016-01-15	miniUI	Shiny UI Widgets for Small Screens
2016-01-15	mmcm	Modified Maximum Contrast Method
2016-01-15	networkDynamic	Dynamic Extensions for Network Objects
2016-01-15	PASWR2	Probability and Statistics with R, Second Edition
2016-01-15	pez	Phylogenetics for the Environmental Sciences
2016-01-15	sharx	Models and Data Sets for the Study of Species-Area Relationships
2016-01-14	mapdata	Extra Map Databases
2016-01-13	BinaryEMVS	Variable Selection for Binary Data Using the EM Algorithm
2016-01-13	breakpoint	An R Package for Multiple Break-Point Detection via the Cross-Entropy Method
2016-01-13	cofeatureR	Generate Cofeature Matrices
2016-01-13	dChipIO	Methods for Reading dChip Files
2016-01-13	HWxtest	Exact Tests for Hardy-Weinberg Proportions
2016-01-13	lpSolveAPI	R Interface to 'lp_solve' Version 5.5.2.0
2016-01-13	MASSTIMATE	Body Mass Estimation Equations for Vertebrates
2016-01-13	proftools	Profile Output Processing Tools for R
2016-01-13	rPowerSampleSize	Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate
2016-01-13	SamplingStrata	Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys
2016-01-13	sivipm	Sensitivity Indices with Dependent Inputs
2016-01-13	svs	Tools for Semantic Vector Spaces
2016-01-13	xkcd	Plotting ggplot2 Graphics in an XKCD Style
2016-01-12	CircOutlier	Detection of Outliers in Circular-Circular Regression
2016-01-12	ggcorrplot	Visualization of a Correlation Matrix using 'ggplot2'
2016-01-12	intercure	Cure Rate Estimators for Interval Censored Data
2016-01-12	MCPAN	Multiple Comparisons Using Normal Approximation
2016-01-12	mefa	Multivariate Data Handling in Ecology and Biogeography
2016-01-12	msltrend	Improved Techniques to Estimate Trend, Velocity and Acceleration from Sea Level Records
2016-01-12	networkDynamicData	Dynamic (Longitudinal) Network Datasets
2016-01-12	primerTree	Visually Assessing the Specificity and Informativeness of Primer Pairs
2016-01-12	rodd	Optimal Discriminating Designs
2016-01-12	SALES	Elastic Net and (Adaptive) Lasso Penalized Sparse Asymmetric Least Squares (SALES) and Coupled Sparse Asymmetric Least Squares (COSALES) using Coordinate Descent and Proximal Gradient Algorithms
2016-01-11	concordance	Product Concordance
2016-01-11	gSEM	Semi-Supervised Generalized Structural Equation Modeling
2016-01-11	LPR	Lasso and Partial Ridge
2016-01-11	mmppr	Markov Modulated Poisson Process for Unsupervised Event Detection in Time Series of Counts
2016-01-11	pRF	Permutation Significance for Random Forests
2016-01-11	rlm	Robust Fitting of Linear Model
2016-01-09	lazyWeave	LaTeX Wrappers for R Users
2016-01-08	bmeta	Bayesian Meta-Analysis and Meta-Regression
2016-01-08	fwi.fbp	Fire Weather Index System and Fire Behaviour Prediction System Calculations
2016-01-08	MakefileR	Create 'Makefiles' Using R
2016-01-08	robustHD	Robust Methods for High-Dimensional Data
2016-01-08	S2sls	Spatial Two Stage Least Squares Estimation
2016-01-08	vrcp	Change Point Estimation for Regression with Varying Segments and Heteroscedastic Variances
2016-01-07	AsioHeaders	'Asio' C++ Header Files
2016-01-07	glmvsd	Variable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models
2016-01-07	gyriq	Kinship-Adjusted Survival SNP-Set Analysis
2016-01-07	neuroim	Data Structures and Handling for Neuroimaging Data
2016-01-07	solarPos	Solar Position Algorithm for Solar Radiation Applications
2016-01-06	PK	Basic Non-Compartmental Pharmacokinetics
2016-01-06	RcmdrPlugin.FactoMineR	Graphical User Interface for FactoMineR
2016-01-06	rotations	Tools for Working with Rotation Data
2016-01-06	SimRAD	Simulations to Predict the Number of RAD and GBS Loci
2016-01-06	stlplus	Enhanced Seasonal Decomposition of Time Series by Loess
2016-01-05	cds	Constrained Dual Scaling for Detecting Response Styles
2016-01-05	hiddenf	The All-Configurations, Maximum-Interaction F-Test for Hidden Additivity
2016-01-05	lsbclust	Least-Squares Bilinear Clustering for Three-Way Data
2016-01-05	RImagePalette	Extract the Colors from Images
2016-01-05	RSAGA	SAGA Geoprocessing and Terrain Analysis in R
2016-01-04	cg	Compare Groups, Analytically and Graphically
2016-01-04	GoFKernel	Testing Goodness-of-Fit with the Kernel Density Estimator
2016-01-04	hot.deck	Multiple Hot-Deck Imputation
2016-01-04	LiblineaR.ACF	Linear Classification with Online Adaptation of Coordinate Frequencies
2016-01-04	M4comp	Data from the M4 Time Series Forecasting Competition
2016-01-04	PlayerRatings	Dynamic Updating Methods for Player Ratings Estimation
2016-01-04	qtlc	Densitometric Analysis of Thin-Layer Chromatography Plates
2016-01-03	grpss	Group Screening and Selection
2016-01-03	icensmis	Study Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes
2016-01-03	NNLM	Fast and Versatile Non-Negative Matrix Factorization
2016-01-03	rainbow	Rainbow Plots, Bagplots and Boxplots for Functional Data
2016-01-03	request	High Level 'HTTP' Client
2016-01-03	tempcyclesdata	Climate Data from Wang and Dillon
2016-01-02	RAM	R for Amplicon-Sequencing-Based Microbial-Ecology
2016-01-01	hwde	Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci
2016-01-01	msma	Multiblock Sparse Multivariable Analysis
2015-12-31	DTR	Estimation and Comparison of Dynamic Treatment Regimes
2015-12-31	markophylo	Markov Chain Models for Phylogenetic Trees
2015-12-31	optiRum	Financial Functions & More
2015-12-31	ParallelPC	Paralellised Versions of Constraint Based Causal Discovery Algorithms
2015-12-31	rsunlight	Interface to 'Sunlight' Foundation 'APIs'
2015-12-30	geoelectrics	3D-Visualization of Geoelectric Resistivity Measurement Profiles
2015-12-30	ifctools	Italian Fiscal Code ('Codice Fiscale') Utilities
2015-12-30	plspm.formula	Formula Based PLS Path Modeling
2015-12-30	robreg3S	Three-Step Regression and Inference for Cellwise and Casewise Contamination
2015-12-30	rvalues	R-Values for Ranking in High-Dimensional Settings
2015-12-30	sdmvspecies	Create Virtual Species for Species Distribution Modelling
2015-12-30	spdynmod	Spatio-Dynamic Wetland Plant Communities Model
2015-12-29	Deducer	A Data Analysis GUI for R
2015-12-29	diffeR	Metrics of Difference for Comparing Pairs of Maps
2015-12-29	GiANT	Gene Set Uncertainty in Enrichment Analysis
2015-12-29	seroincidence	Estimating Infection Rates from Serological Data
2015-12-29	TOC	Total Operating Characteristic Curve and ROC Curve
2015-12-29	xtal	Crystallization Toolset
2015-12-28	BiasedUrn	Biased Urn Model Distributions
2015-12-28	DTRlearn	Learning Algorithms for Dynamic Treatment Regimes
2015-12-28	multilevelPSA	Multilevel Propensity Score Analysis
2015-12-28	qiimer	Work with QIIME Output Files in R
2015-12-28	rmgarch	Multivariate GARCH Models
2015-12-28	Rsolnp	General Non-Linear Optimization
2015-12-27	MultAlloc	Optimal Allocation in Stratified Sampling
2015-12-26	validateRS	One-Sided Multivariate Testing Procedures for Rating Systems
2015-12-25	evd	Functions for Extreme Value Distributions
2015-12-25	Matching	Multivariate and Propensity Score Matching with Balance Optimization
2015-12-24	MediaK	Calculate MeDiA_K Distance
2015-12-24	multifwf	Read Fixed Width Format Files Containing Lines of Different Type
2015-12-24	SchemaOnRead	Automated Schema on Read
2015-12-24	shock	Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models
2015-12-24	XNomial	Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities
2015-12-23	batteryreduction	An R Package for Data Reduction by Battery Reduction
2015-12-23	BlandAltmanLeh	Plots (Slightly Extended) Bland-Altman Plots
2015-12-23	kergp	Gaussian Process Laboratory
2015-12-23	population	Models for Simulating Populations
2015-12-23	r4ss	R Code for Stock Synthesis
2015-12-23	SpatialTools	Tools for Spatial Data Analysis
2015-12-22	federalregister	Client Package for the U.S. Federal Register API
2015-12-22	gear	Geostatistical Analysis in R
2015-12-22	Lock5withR	Datasets for 'Statistics: Unlocking the Power of Data'
2015-12-22	RPublica	ProPublica API Client
2015-12-22	sValues	Measures of the Sturdiness of Regression Coefficients
2015-12-21	auRoc	Various Methods to Estimate the AUC
2015-12-21	clogitboost	Boosting Conditional Logit Model
2015-12-21	ltsa	Linear Time Series Analysis
2015-12-21	metricsgraphics	Create Interactive Charts with the JavaScript 'MetricsGraphics' Library
2015-12-21	nnetpredint	Prediction Intervals of Multi-Layer Neural Networks
2015-12-21	ProbYX	Inference for the Stress-Strength Model R = P(Y<X)
2015-12-21	statebins	U.S. State Cartogram Heatmaps in R; an Alternative to Choropleth Maps for USA States
2015-12-21	VARsignR	Sign Restrictions, Bayesian, Vector Autoregression Models
2015-12-20	depth.plot	Multivariate Analogy of Quantiles
2015-12-19	dynsim	Dynamic Simulations of Autoregressive Relationships
2015-12-19	FWDselect	Selecting Variables in Regression Models
2015-12-19	MTurkRGUI	A Graphical User Interface for MTurkR
2015-12-19	TITAN2	Threshold Indicator Taxa Analysis
2015-12-18	bodenmiller	Profilling of Peripheral Blood Mononuclear Cells using CyTOF
2015-12-18	granovaGG	Graphical Analysis of Variance Using ggplot2
2015-12-18	VBLPCM	Variational Bayes Latent Position Cluster Model for Networks
2015-12-17	CCAGFA	Bayesian Canonical Correlation Analysis and Group Factor Analysis
2015-12-16	dse	Dynamic Systems Estimation (Time Series Package)
2015-12-16	gpDDE	General Profiling Method for Delay Differential Equation
2015-12-16	keep	Arrays with Better Control over Dimension Dropping
2015-12-16	pamm	Power Analysis for Random Effects in Mixed Models
2015-12-16	PHeval	Evaluation of the Proportional Hazards Assumption with a Standardized Score Process
2015-12-16	rebus.datetimes	Date and Time Extensions for the 'rebus' Package
2015-12-16	rebus.numbers	Numeric Extensions for the 'rebus' Package
2015-12-16	RSGHB	Functions for Hierarchical Bayesian Estimation: A Flexible Approach
2015-12-16	tfplot	Time Frame User Utilities
2015-12-16	tframe	Time Frame Coding Kernel
2015-12-15	rTensor	Tools for Tensor Analysis and Decomposition
2015-12-15	treecm	Centre of Mass Assessment and Consolidation of Trees
2015-12-14	dendsort	Modular Leaf Ordering Methods for Dendrogram Nodes
2015-12-14	ERP	Significance Analysis of Event-Related Potentials Data
2015-12-14	exif	Read EXIF Metadata from JPEGs
2015-12-14	hellno	Providing 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()'
2015-12-14	hpoPlot	Functions for Plotting HPO Terms
2015-12-14	LightningR	Tools for Communication with Lightning-Viz Server
2015-12-14	vita	Variable Importance Testing Approaches
2015-12-13	CITAN	CITation ANalysis Toolpack
2015-12-13	solarius	An R Interface to SOLAR
2015-12-12	ADMMnet	Regularized Model with Selecting the Number of Non-Zeros
2015-12-12	Frames2	Estimation in Dual Frame Surveys
2015-12-12	HLMdiag	Diagnostic Tools for Hierarchical (Multilevel) Linear Models
2015-12-12	libamtrack	Computational Routines for Proton and Ion Radiotherapy
2015-12-11	pheatmap	Pretty Heatmaps
2015-12-11	rbvs	Ranking-Based Variable Selection
2015-12-11	RXMCDA	Functions to Parse and Create XMCDA Files
2015-12-11	SAFD	Statistical Analysis of Fuzzy Data
2015-12-11	SPmlficmcm	Semiparametric Maximum Likelihood Method for Interactions Gene-Environment in Case-Mother Control-Mother Designs
2015-12-10	CCMnet	Simulate Congruence Class Model for Networks
2015-12-10	Coxnet	Regularized Cox Model
2015-12-10	RANKS	Ranking of Nodes with Kernelized Score Functions
2015-12-10	simplegraph	Simple Graph Data Types and Basic Algorithms
2015-12-09	maddison	Maddison Project Database
2015-12-09	MScombine	Combine Data from Positive and Negative Ionization Mode Finding Common Entities
2015-12-09	NetPreProc	Network Pre-Processing and Normalization
2015-12-09	orsifronts	Southern Ocean Frontal Distributions (Orsi)
2015-12-09	pitchRx	Tools for Harnessing 'MLBAM' 'Gameday' Data and Visualizing 'pitchfx'
2015-12-09	riskR	Risk Management
2015-12-09	rwfec	R Wireless, Forward Error Correction
2015-12-09	sensitivity2x2xk	Sensitivity Analysis for 2x2xk Tables in Observational Studies
2015-12-08	MNS	Mixed Neighbourhood Selection
2015-12-08	PAGWAS	Pathway Analysis Methods for Genomewide Association Data
2015-12-08	RobustAFT	Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case
2015-12-07	cranlogs	Download Logs from the 'RStudio' 'CRAN' Mirror
2015-12-07	G2Sd	Grain-Size Statistics and Description of Sediment
2015-12-07	PIGShift	Polygenic Inverse Gamma Shifts
2015-12-07	WriteXLS	Cross-Platform Perl Based R Function to Create Excel 2003 (XLS) and Excel 2007 (XLSX) Files
2015-12-06	Amelia	A Program for Missing Data
2015-12-06	caRpools	CRISPR AnalyzeR for Pooled CRISPR Screens
2015-12-06	JacobiEigen	Classical Jacobi Eigensolution Algorithm
2015-12-05	llama	Leveraging Learning to Automatically Manage Algorithms
2015-12-05	MetaCycle	Evaluate Periodicity in Large Scale Data
2015-12-05	RedditExtractoR	Reddit Data Extraction Toolkit
2015-12-05	sleekts	4253H, Twice Smoothing
2015-12-04	acp	Autoregressive Conditional Poisson
2015-12-04	hierfstat	Estimation and Tests of Hierarchical F-Statistics
2015-12-04	npIntFactRep	Nonparametric Interaction Tests for Factorial Designs with Repeated Measures
2015-12-04	ordiBreadth	Ordinated Diet Breadth
2015-12-04	peakPick	Peak Picking Methods Inspired by Biological Data
2015-12-03	EpiDynamics	Dynamic Models in Epidemiology
2015-12-03	pedometrics	Pedometric Tools and Techniques
2015-12-03	ppcor	Partial and Semi-Partial (Part) Correlation
2015-12-03	ryouready	Companion to the Forthcoming Book - R you Ready?
2015-12-03	SAGA	Software for the Analysis of Genetic Architecture
2015-12-03	sglasso	Lasso Method for RCON(V,E) Models
2015-12-03	tggd	The Standard Distribution Functions for the Truncated Generalised Gamma Distribution
2015-12-02	features	Feature Extraction for Discretely-Sampled Functional Data
2015-12-02	kriens	Continuation Passing Style Development
2015-12-02	paleoTS	Analyze Paleontological Time-Series
2015-12-02	properties	Parse Java Properties Files for R Service Bus Applications
2015-12-02	QCSIS	Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation
2015-12-02	svdvis	Singular Value Decomposition Visualization
2015-11-30	causaldrf	Tools for Estimating Causal Dose Response Functions
2015-11-30	dsample	Discretization-Based Direct Random Sample Generation
2015-11-30	injectoR	R Dependency Injection
2015-11-30	latex2exp	Use LaTeX Expressions in Plots
2015-11-30	lodGWAS	Genome-Wide Association Analysis of a Biomarker Accounting for Limit of Detection
2015-11-30	oaColors	OpenAnalytics Colors Package
2015-11-30	oaPlots	OpenAnalytics Plots Package
2015-11-30	proton	The Proton Game
2015-11-29	mcemGLM	Maximum Likelihood Estimation for Generalized Linear Mixed Models
2015-11-29	TFMPvalue	Efficient and Accurate P-Value Computation for Position Weight Matrices
2015-11-28	ELMR	Extreme Machine Learning (ELM)
2015-11-26	GroupTest	Multiple Testing Procedure for Grouped Hypotheses
2015-11-25	bvarsv	Bayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters
2015-11-25	ddR	Distributed Data Structures in R
2015-11-25	MMWRweek	Convert Dates to MMWR Day, Week, and Year
2015-11-24	apricom	Tools for the a Priori Comparison of Regression Modelling Strategies
2015-11-24	BMS	Bayesian Model Averaging Library
2015-11-24	cmvnorm	The Complex Multivariate Gaussian Distribution
2015-11-24	dprep	Data Pre-Processing and Visualization Functions for Classification
2015-11-24	ipflasso	Integrative Lasso with Penalty Factors
2015-11-24	kofnGA	A Genetic Algorithm for Fixed-Size Subset Selection
2015-11-24	OrdNor	Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions
2015-11-24	pgnorm	The p-Generalized Normal Distribution
2015-11-24	UncerIn2	Implements Models of Uncertainty into the Interpolation Functions
2015-11-24	yummlyr	R Bindings for Yummly API
2015-11-23	AggregateR	Aggregate Numeric, Date and Categorical Variables by an ID
2015-11-23	antitrust	Tools for Antitrust Practitioners
2015-11-23	flexPM	Flexible Parametric Models for Censored and Truncated Data
2015-11-23	ForecastCombinations	Forecast Combinations
2015-11-23	kmc	Kaplan-Meier Estimator with Constraints for Right Censored Data – a Recursive Computational Algorithm
2015-11-23	SimSeq	Nonparametric Simulation of RNA-Seq Data
2015-11-22	labelrank	Predicting Rankings of Labels
2015-11-22	lda	Collapsed Gibbs Sampling Methods for Topic Models
2015-11-22	tracheideR	Standardize Tracheidograms
2015-11-21	extracat	Categorical Data Analysis and Visualization
2015-11-21	FACTMLE	Maximum Likelihood Factor Analysis
2015-11-21	gfcanalysis	Tools for Working with Hansen et al. Global Forest Change Dataset
2015-11-21	scholar	Analyse Citation Data from Google Scholar
2015-11-20	bcrm	Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
2015-11-19	glmx	Generalized Linear Models Extended
2015-11-19	s4vd	Biclustering via Sparse Singular Value Decomposition Incorporating Stability Selection
2015-11-19	YuGene	A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
2015-11-18	catenary	Fits a Catenary to Given Points
2015-11-18	ConConPiWiFun	Optimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions
2015-11-18	JGEE	Joint Generalized Estimating Equation Solver
2015-11-18	jvnVaR	Value at Risk
2015-11-18	ndl	Naive Discriminative Learning
2015-11-18	rapport	A Report Templating System
2015-11-18	tnet	Software for Analysis of Weighted, Two-Mode, and Longitudinal Networks
2015-11-18	Traitspace	A Predictive Model for Trait Based Community Assembly of Plant Species
2015-11-17	phylometrics	Estimating Statistical Errors of Phylogenetic Metrics
2015-11-17	SparseLearner	Sparse Learning Algorithms Using a LASSO-Type Penalty for Coefficient Estimation and Model Prediction
2015-11-16	dslice	Dynamic Slicing
2015-11-16	geoBayes	Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods
2015-11-16	gridDebug	Debugging 'grid' Graphics
2015-11-16	nCDunnett	Noncentral Dunnett's Test Distribution
2015-11-16	prism	Access Data from the Oregon State Prism Climate Project
2015-11-15	landest	Landmark Estimation of Survival and Treatment Effect
2015-11-15	rPython	Package Allowing R to Call Python
2015-11-15	sms	Spatial Microsimulation
2015-11-13	Map2NCBI	Mapping Markers to the Nearest Genomic Feature
2015-11-13	mvglmmRank	Multivariate Generalized Linear Mixed Models for Ranking Sports Teams
2015-11-13	REdaS	Companion Package to the Book 'R: Einführung durch angewandte Statistik'
2015-11-13	TopKLists	Inference, Aggregation and Visualization for Top-K Ranked Lists
2015-11-12	DirichletReg	Dirichlet Regression in R
2015-11-12	franc	Detect the Language of Text
2015-11-12	msr	Morse-Smale Approximation, Regression and Visualization
2015-11-12	ptycho	Bayesian Variable Selection with Hierarchical Priors
2015-11-12	rnetcarto	Fast Network Modularity and Roles Computation by Simulated Annealing (Rgraph C Library Wrapper for R)
2015-11-12	rtable	Tabular Reporting Functions
2015-11-12	smerc	Statistical Methods for Regional Counts
2015-11-11	gbm2sas	Convert GBM Object Trees to SAS Code
2015-11-11	qtpaint	Qt-Based Painting Infrastructure
2015-11-11	steadyICA	ICA and Tests of Independence via Multivariate Distance Covariance
2015-11-11	TRD	Transmission Ratio Distortion
2015-11-10	FastKM	A Fast Multiple-Kernel Method Based on a Low-Rank Approximation
2015-11-10	specmine	Metabolomics and Spectral Data Analysis and Mining
2015-11-10	TruncatedNormal	Truncated Multivariate Normal
2015-11-09	ade4TkGUI	'ade4' Tcl/Tk Graphical User Interface
2015-11-09	CovSel	Model-Free Covariate Selection
2015-11-09	genSurv	Generating Multi-State Survival Data
2015-11-09	gvc	Global Value Chains Tools
2015-11-09	maxLik	Maximum Likelihood Estimation and Related Tools
2015-11-09	smoothHR	Smooth Hazard Ratio Curves Taking a Reference Value
2015-11-09	TPmsm	Estimation of Transition Probabilities in Multistate Models
2015-11-09	YPmodel	The Short-Term and Long-Term Hazard Ratio Model for Survival Data
2015-11-08	BaSTA	Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data
2015-11-07	LRcontrast	Dose Response Signal Detection under Model Uncertainty
2015-11-07	pampe	Implementation of the Panel Data Approach Method for Program Evaluation
2015-11-07	personograph	Pictographic Representation of Treatment Effects
2015-11-07	phia	Post-Hoc Interaction Analysis
2015-11-07	Rtts	Convert Text into Speech
2015-11-07	SPCALDA	A New Reduced-Rank Linear Discriminant Analysis Method
2015-11-06	BayesMAMS	Designing Bayesian Multi-Arm Multi-Stage Studies
2015-11-06	easypower	Sample Size Estimation for Experimental Designs
2015-11-06	mogavs	Multiobjective Genetic Algorithm for Variable Selection in Regression
2015-11-06	rucm	Implementation of Unobserved Components Model (UCM)
2015-11-06	RUnit	R Unit Test Framework
2015-11-06	seedy	Simulation of Evolutionary and Epidemiological Dynamics
2015-11-05	kmeans.ddR	Distributed k-Means for Big Data using 'ddR' API
2015-11-05	rchess	Chess Move, Generation/Validation, Piece Placement/ Movement, and Check/Checkmate/Stalemate Detection
2015-11-05	statnetWeb	A Graphical User Interface for Network Modeling with 'Statnet'
2015-11-05	survJamda	Survival Prediction by Joint Analysis of Microarray Gene Expression Data
2015-11-05	tolBasis	Fundamental Definitions and Utilities of the Time Oriented Language (TOL)
2015-11-04	hermite	Generalized Hermite Distribution
2015-11-04	phylin	Spatial Interpolation of Genetic Data
2015-11-04	relen	Compute Relative Entropy
2015-11-04	wPerm	Permutation Tests
2015-11-03	epiDisplay	Epidemiological Data Display Package
2015-11-03	merror	Accuracy and Precision of Measurements
2015-11-03	Phxnlme	Run Phoenix NLME and Perform Post-Processing
2015-11-03	RRTCS	Randomized Response Techniques for Complex Surveys
2015-11-03	SLOPE	Sorted L1 Penalized Estimation (SLOPE)
2015-11-02	mvProbit	Multivariate Probit Models
2015-11-02	Rcolombos	Interface to Colombos Compendia using the Exposed REST API
2015-11-02	RGoogleAnalyticsPremium	Unsampled Data in R for Google Analytics Premium Accounts
2015-11-01	DataLoader	Import Multiple File Types
2015-11-01	matchingR	Matching Algorithms in R and C++
2015-11-01	NetSwan	Network Strengths and Weaknesses Analysis
2015-11-01	nlrr	Non-Linear Relative Risk Estimation and Plotting
2015-11-01	PortRisk	Portfolio Risk Analysis
2015-10-31	AlgebraicHaploPackage	Haplotype Two Snips Out of a Paired Group of Patients
2015-10-31	corkscrew	Preprocessor for Data Modeling
2015-10-31	kedd	Kernel Estimator and Bandwidth Selection for Density and Its Derivatives
2015-10-31	smss	Datasets for Agresti and Finlay's "Statistical Methods for the Social Sciences"
2015-10-31	TSTr	Ternary Search Tree for Auto-Completion and Spell Checking
2015-10-29	CDVine	Statistical Inference of C- And D-Vine Copulas
2015-10-29	RNaviCell	Visualization of High-Throughput Data on Large-Scale Biological Networks
2015-10-28	aroma.cn	Copy-Number Analysis of Large Microarray Data Sets
2015-10-28	chebpol	Multivariate Chebyshev Interpolation
2015-10-28	RESS	Integrates R and Essentia
2015-10-28	TESS	Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction Events
2015-10-27	ACNE	Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
2015-10-27	calmate	Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
2015-10-27	settings	Software Option Settings Manager for R
2015-10-26	batman	Convert Categorical Representations of Logicals to Actual Logicals
2015-10-26	feature	Local Inferential Feature Significance for Multivariate Kernel Density Estimation
2015-10-26	TDCor	Gene Network Inference from Time-Series Transcriptomic Data
2015-10-26	ukgasapi	API for UK Gas Market Information
2015-10-25	bayou	Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
2015-10-25	MixedTS	Mixed Tempered Stable Distribution
2015-10-25	MPCI	Multivariate Process Capability Indices (MPCI)
2015-10-24	AdapEnetClass	A Class of Adaptive Elastic Net Methods for Censored Data
2015-10-24	CoxPlus	Cox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects
2015-10-24	jackknifeKME	Jackknife Estimates of Kaplan-Meier Estimators or Integrals
2015-10-24	LDAvis	Interactive Visualization of Topic Models
2015-10-24	PanelCount	Random Effects and/or Sample Selection Models for Panel Count Data
2015-10-23	copulaedas	Estimation of Distribution Algorithms Based on Copulas
2015-10-23	hotspot	Software Hotspot Analysis
2015-10-23	imputeYn	Imputing the Last Largest Censored Observation(s) Under Weighted Least Squares
2015-10-23	mhde	Minimum Hellinger Distance Test for Normality
2015-10-23	poisson	Simulating Homogenous & Non-Homogenous Poisson Processes
2015-10-23	pvclust	Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
2015-10-23	qlcVisualize	Visualization for Quantitative Language Comparison (QLC)
2015-10-22	ckanr	Client for the Comprehensive Knowledge Archive Network ('CKAN') 'API'
2015-10-22	dgmb	Simulating Data for PLS Mode B Structural Models
2015-10-22	HotDeckImputation	Hot Deck Imputation Methods for Missing Data
2015-10-22	ProNet	Biological Network Construction, Visualization and Analyses
2015-10-22	stationaRy	Get Hourly Meteorological Data from Global Stations
2015-10-22	TCGA2STAT	Simple TCGA Data Access for Integrated Statistical Analysis in R
2015-10-22	uptimeRobot	Access the UptimeRobot Ping API
2015-10-22	weightedScores	Weighted Scores Method for Regression Models with Dependent Data
2015-10-22	wellknown	Convert Between 'WKT' and 'GeoJSON'
2015-10-21	fanovaGraph	Building Kriging Models from FANOVA Graphs
2015-10-21	fat2Lpoly	Two-Locus Family-Based Association Test with Polytomic Outcome
2015-10-21	MultiRR	Bias, Precision, and Power for Multi-Level Random Regressions
2015-10-20	crank	Completing Ranks
2015-10-20	eventInterval	Sequential Event Interval Analysis
2015-10-20	GSSE	Genotype-Specific Survival Estimation
2015-10-20	prettyR	Pretty Descriptive Stats
2015-10-19	crop	Graphics Cropping Tool
2015-10-19	diezeit	R Interface to the ZEIT ONLINE Content API
2015-10-19	HiDimDA	High Dimensional Discriminant Analysis
2015-10-19	ksrlive	Identify Kinase Substrate Relationships Using Dynamic Data
2015-10-19	RcmdrPlugin.Export	Export R Output to LaTeX or HTML
2015-10-19	SimHaz	Simulated Survival and Hazard Analysis for Time-Dependent Exposure
2015-10-19	TIMP	Fitting Separable Nonlinear Models in Spectroscopy and Microscopy
2015-10-18	complmrob	Robust Linear Regression with Compositional Data as Covariates
2015-10-18	DiscreteWeibull	Discrete Weibull Distributions (Type 1 and 3)
2015-10-18	FastRCS	Fits the FastRCS Robust Multivariable Linear Regression Model
2015-10-18	FeatureHashing	Creates a Model Matrix via Feature Hashing with a Formula Interface
2015-10-18	speciesgeocodeR	Prepare Species Distributions for the Use in Phylogenetic Analyses
2015-10-18	wle	Weighted Likelihood Estimation
2015-10-18	xoi	Tools for Analyzing Crossover Interference
2015-10-17	BcDiag	Diagnostics Plots for Bicluster Data
2015-10-16	CHsharp	Choi and Hall Style Data Sharpening
2015-10-16	cnmlcd	Maximum Likelihood Estimation of a Log-Concave Density Function
2015-10-16	survsim	Simulation of Simple and Complex Survival Data
2015-10-14	covBM	Brownian Motion Processes for 'nlme'-Models
2015-10-14	ecotoxicology	Methods for Ecotoxicology
2015-10-14	ReliabilityTheory	Tools for Structural Reliability Analysis
2015-10-14	snowfall	Easier cluster computing (based on snow)
2015-10-14	TLBC	Two-Level Behavior Classification
2015-10-13	birdring	Methods to Analyse Ring Re-Encounter Data
2015-10-13	FCGR	Fatigue Crack Growth in Reliability
2015-10-13	lift	Compute the Top Decile Lift and Plot the Lift Curve
2015-10-13	nlnet	Nonlinear Network Reconstruction and Clustering Based on DCOL (Distance Based on Conditional Ordered List)
2015-10-13	SyncMove	Subsample Temporal Data to Synchronal Events and Compute the MCI
2015-10-13	wingui	Advanced Windows Functions
2015-10-12	apsimr	Edit, Run and Evaluate APSIM Simulations Easily Using R
2015-10-12	compendiumdb	Tools for Retrieval and Storage of Functional Genomics Data
2015-10-12	deformula	Integration of One-Dimensional Functions with Double Exponential Formulas
2015-10-12	EloChoice	Preference Rating for Visual Stimuli Based on Elo Ratings
2015-10-12	geesmv	Modified Variance Estimators for Generalized Estimating Equations
2015-10-12	subspace	Interface to OpenSubspace
2015-10-11	gitter	Quantification of Pinned Microbial Cultures
2015-10-11	MVT	Estimation and Testing for the Multivariate t-Distribution
2015-10-10	gdalUtils	Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities
2015-10-10	HDGLM	Tests for High Dimensional Generalized Linear Models
2015-10-10	pedgene	Gene-Level Statistics for Pedigree Data
2015-10-10	sequenza	Copy Number Estimation from Tumor Genome Sequencing Data
2015-10-10	sisal	Sequential Input Selection Algorithm
2015-10-09	FIACH	Retrospective Noise Control for fMRI
2015-10-09	qlcMatrix	Utility Sparse Matrix Functions for Quantitative Language Comparison
2015-10-08	chemCal	Calibration Functions for Analytical Chemistry
2015-10-08	fastdigest	Fast, Low Memory-Footprint Digests of R Objects
2015-10-08	SurvRegCensCov	Weibull Regression for a Right-Censored Endpoint with Interval-Censored Covariate
2015-10-07	EBEN	Empirical Bayesian Elastic Net
2015-10-07	fanplot	Visualisation of Sequential Probability Distributions Using Fan Charts
2015-10-07	randomForest	Breiman and Cutler's Random Forests for Classification and Regression
2015-10-06	assertive.code	Assertions to Check Properties of Code
2015-10-06	assertive.data	Assertions to Check Properties of Data
2015-10-06	assertive.data.uk	Assertions to Check Properties of Strings
2015-10-06	assertive.data.us	Assertions to Check Properties of Strings
2015-10-06	assertive.matrices	Assertions to Check Properties of Matrices
2015-10-06	assertive.models	Assertions to Check Properties of Models
2015-10-06	elasso	Enhanced Least Absolute Shrinkage and Selection Operator Regression Model
2015-10-06	jrvFinance	Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
2015-10-05	cate	High Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation
2015-10-05	conicfit	Algorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov
2015-10-05	diagonals	Block Diagonal Extraction or Replacement
2015-10-05	geofd	Spatial Prediction for Function Value Data
2015-10-05	PsiHat	Several Local False Discovery Rate Estimators
2015-10-05	smallarea	Fits a Fay Herriot Model
2015-10-05	wqs	Weighted Quantile Sum Regression
2015-10-03	MetaPath	Perform the Meta-Analysis for Pathway Enrichment Analysis (MAPE)
2015-10-02	colorhcplot	Colorful Hierarchical Clustering Dendrograms
2015-10-02	GeoBoxplot	Geographic Box Plot
2015-10-02	R2Cuba	Multidimensional Numerical Integration
2015-10-02	SphericalK	Spherical K-Function
2015-10-01	fail	File Abstraction Interface Layer (FAIL)
2015-10-01	LSTS	Locally Stationary Time Series
2015-10-01	RcmdrPlugin.EBM	Rcmdr Evidence Based Medicine Plug-in Package
2015-10-01	sanon	Stratified Analysis with Nonparametric Covariable Adjustment
2015-10-01	snpEnrichment	SNPs Enrichment Analysis
2015-09-29	kernelFactory	Kernel Factory: An Ensemble of Kernel Machines
2015-09-29	learNN	Examples of Neural Networks
2015-09-29	wbsts	Multiple Change-Point Detection for Nonstationary Time Series
2015-09-28	covmat	Covariance Matrix Estimation
2015-09-28	MoTBFs	Learning Hybrid Bayesian Networks using Mixtures of Truncated Basis Functions
2015-09-28	pdc	Permutation Distribution Clustering
2015-09-28	pwrRasch	Statistical Power Simulation for Testing the Rasch Model
2015-09-28	rleafmap	Interactive Maps with R and Leaflet
2015-09-28	SOPIE	Non-Parametric Estimation of the Off-Pulse Interval of a Pulsar
2015-09-28	tmlenet	Targeted Maximum Likelihood Estimation for Network Data
2015-09-27	plotpc	Plot Principal Component Histograms Around a Scatter Plot
2015-09-27	rankdist	Distance Based Ranking Models
2015-09-27	twostageTE	Two-Stage Threshold Estimation
2015-09-26	BCBCSF	Bias-Corrected Bayesian Classification with Selected Features
2015-09-26	Cairo	R graphics device using cairo graphics library for creating high-quality bitmap (PNG, JPEG, TIFF), vector (PDF, SVG, PostScript) and display (X11 and Win32) output
2015-09-26	DRIP	Discontinuous Regression and Image Processing
2015-09-26	nivm	Noninferiority Tests with Variable Margins
2015-09-26	TTS	Master Curve Estimates Corresponding to Time-Temperature Superposition
2015-09-26	weightTAPSPACK	Weight TAPS Data
2015-09-25	drsmooth	Dose-Response Modeling with Smoothing Splines
2015-09-25	LDRTools	Tools for Linear Dimension Reduction
2015-09-25	mmeln	Estimation of Multinormal Mixture Distribution
2015-09-25	nanop	Tools for Nanoparticle Simulation and Calculation of PDF and Total Scattering Structure Function
2015-09-25	rbiouml	Interact with BioUML Server
2015-09-25	Skillings.Mack	The Skillings-Mack Test Statistic for Block Designs with Missing Observations
2015-09-25	STAND	Statistical Analysis of Non-Detects
2015-09-24	drLumi	Multiplex Immunoassays Data Analysis
2015-09-24	meteo	Spatio-Temporal Analysis and Mapping of Meteorological Observations
2015-09-24	NostalgiR	Advanced Text-Based Plots
2015-09-23	iC10	A Copy Number and Expression-Based Classifier for Breast Tumours
2015-09-23	ICSNP	Tools for Multivariate Nonparametrics
2015-09-23	packagetrackr	Track R Package Downloads from RStudio's CRAN Mirror
2015-09-23	smacpod	Statistical Methods for the Analysis of Case-Control Point Data
2015-09-22	LPCM	Local Principal Curve Methods
2015-09-21	Rip46	Utils for IP4 and IP6 Addresses
2015-09-20	cord	Community Estimation in G-Models via CORD
2015-09-20	HMDHFDplus	Read HMD and HFD Data from the Web
2015-09-20	rcrypt	Symmetric File Encryption Using GPG
2015-09-19	BayesFactor	Computation of Bayes Factors for Common Designs
2015-09-19	crimelinkage	Statistical Methods for Crime Series Linkage
2015-09-19	ImportExport	Import and Export Data
2015-09-19	kelvin	Calculate Solutions to the Kelvin Differential Equation using Bessel Functions
2015-09-19	lpSolve	Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
2015-09-19	network	Classes for Relational Data
2015-09-18	GAR	Authorize and Request Google Analytics Data
2015-09-18	GRTo	Tools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes
2015-09-18	MBTAr	Access Data from the Massachusetts Bay Transit Authority (MBTA) Web API
2015-09-18	rlecuyer	R Interface to RNG with Multiple Streams
2015-09-18	Rtwalk	The R Implementation of the 't-walk' MCMC Algorithm
2015-09-17	backtest	Exploring Portfolio-Based Conjectures About Financial Instruments
2015-09-17	describer	Describe Data in R Using Common Descriptive Statistics
2015-09-17	multirich	Calculate Multivariate Richness via UTC and sUTC
2015-09-17	pro	Point-Process Response Model for Optogenetics
2015-09-17	Rlof	R Parallel Implementation of Local Outlier Factor(LOF)
2015-09-17	solr	General Purpose R Interface to Solr
2015-09-17	spatialprobit	Spatial Probit Models
2015-09-16	discreteRV	Create and Manipulate Discrete Random Variables
2015-09-16	huge	High-Dimensional Undirected Graph Estimation
2015-09-16	JPEN	Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty
2015-09-16	peptider	Evaluation of Diversity in Nucleotide Libraries
2015-09-16	readMzXmlData	Reads Mass Spectrometry Data in mzXML Format
2015-09-16	TestingSimilarity	Bootstrap Test for Similarity of Dose Response Curves Concerning the Maximum Absolute Deviation
2015-09-15	bclust	Bayesian Hierarchical Clustering Using Spike and Slab Models
2015-09-15	cpgen	Parallelized Genomic Prediction and GWAS
2015-09-15	lgarch	Simulation and Estimation of Log-GARCH Models
2015-09-15	OptGS	Near-Optimal and Balanced Group-Sequential Designs for Clinical Trials with Continuous Outcomes
2015-09-14	AutoregressionMDE	Minimum Distance Estimation in Autoregressive Model
2015-09-14	LinearRegressionMDE	Minimum Distance Estimation in Linear Regression Model
2015-09-13	ESKNN	Ensemble of Subset of K-Nearest Neighbours Classifiers for Classification and Class Membership Probability Estimation
2015-09-13	LGRF	Set-Based Tests for Genetic Association in Longitudinal Studies
2015-09-12	GenOrd	Simulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions
2015-09-11	cmrutils	Misc Functions of the Center for the Mathematical Research
2015-09-11	hashids	Generate Short Unique YouTube-Like IDs (Hashes) from Integers
2015-09-11	hindexcalculator	H-Index Calculator using Data from a Web of Science (WoS) Citation Report
2015-09-11	regRSM	Random Subspace Method (RSM) for Linear Regression
2015-09-11	spatialfil	Application of 2D Convolution Kernel Filters to Matrices or 3D Arrays
2015-09-11	xseq	Assessing Functional Impact on Gene Expression of Mutations in Cancer
2015-09-10	acmeR	Implements ACME Estimator of Bird and Bat Mortality by Wind Turbines
2015-09-10	ThreeGroups	ML Estimator for Baseline-Placebo-Treatment (Three-Group) Experiments
2015-09-10	tm.plugin.dc	Text Mining Distributed Corpus Plug-In
2015-09-09	disclapmix	Discrete Laplace Mixture Inference using the EM Algorithm
2015-09-09	geometry	Mesh Generation and Surface Tesselation
2015-09-09	mfp	Multivariable Fractional Polynomials
2015-09-09	onls	Orthogonal Nonlinear Least-Squares Regression
2015-09-09	pla	Parallel Line Assays
2015-09-09	profilr	Quickly Profile Data in R
2015-09-09	rprintf	Adaptive Builder for Formatted Strings
2015-09-09	StatRank	Statistical Rank Aggregation: Inference, Evaluation, and Visualization
2015-09-08	anonymizer	Anonymize Data Containing Personally Identifiable Information
2015-09-08	ftsspec	Spectral Density Estimation and Comparison for Functional Time Series
2015-09-08	prim	Patient Rule Induction Method (PRIM)
2015-09-08	weatherr	Tools for Handling and Scrapping Instant Weather Forecast Feeds
2015-09-07	BioMark	Find Biomarkers in Two-Class Discrimination Problems
2015-09-07	brr	Bayesian Inference on the Ratio of Two Poisson Rates
2015-09-07	FAdist	Distributions that are Sometimes Used in Hydrology
2015-09-07	fclust	Fuzzy Clustering
2015-09-07	geiger	Analysis of Evolutionary Diversification
2015-09-07	mlsjunkgen	Use the MLS Junk Generator Algorithm to Generate a Stream of Pseudo-Random Numbers
2015-09-07	phonenumber	Convert Letters to Numbers and Back as on a Telephone Keypad
2015-09-07	spinyReg	Sparse Generative Model and Its EM Algorithm
2015-09-07	ThreeWay	Three-Way Component Analysis
2015-09-06	cardidates	Identification of Cardinal Dates in Ecological Time Series
2015-09-06	evobiR	Comparative and Population Genetic Analyses
2015-09-06	GeoLight	Analysis of Light Based Geolocator Data
2015-09-06	solidearthtide	Solid Earth Tide Computation
2015-09-05	ACSWR	A Companion Package for the Book "A Course in Statistics with R"
2015-09-05	PabonLasso	Pabon Lasso Graphs and Comparing Situations of a Unit in Two Different Times
2015-09-05	RoughSets	Data Analysis Using Rough Set and Fuzzy Rough Set Theories
2015-09-04	Combine	Game-Theoretic Probability Combination
2015-09-04	DoubleExpSeq	Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter
2015-09-04	edesign	Maximum Entropy Sampling
2015-09-04	IASD	Model Selection for Index of Asymmetry Distribution
2015-09-04	ICC.Sample.Size	Calculation of Sample Size and Power for ICC
2015-09-04	sgt	Skewed Generalized T Distribution Tree
2015-09-03	DAAG	Data Analysis and Graphics Data and Functions
2015-09-03	influenceR	Software Tools to Quantify Structural Importance of Nodes in a Network
2015-09-03	invLT	Inversion of Laplace-Transformed Functions
2015-09-03	LifeHist	Life History Models of Individuals
2015-09-02	EasyABC	Efficient Approximate Bayesian Computation Sampling Schemes
2015-09-02	functools	Functional Programming in R
2015-09-02	IalsaSynthesis	Synthesizing Information Across Collaborating Research
2015-09-02	ParetoPosStable	Computing, Fitting and Validating the PPS Distribution
2015-09-02	sca	Simple Component Analysis
2015-09-02	valottery	Results from the Virginia Lottery Draw Games
2015-09-01	ash	David Scott's ASH Routines
2015-09-01	classGraph	Construct Graphs of S4 Class Hierarchies
2015-09-01	dtw	Dynamic Time Warping Algorithms
2015-09-01	eel	Extended Empirical Likelihood
2015-09-01	fpCompare	Reliable Comparison of Floating Point Numbers
2015-08-31	abodOutlier	Angle-Based Outlier Detection
2015-08-31	hglm	Hierarchical Generalized Linear Models
2015-08-31	MIXFIM	Evaluation of the FIM in NLMEMs using MCMC
2015-08-31	titanic	Titanic Passenger Survival Data Set
2015-08-31	ZRA	Dynamic Plots for Time Series Forecasting
2015-08-30	class	Functions for Classification
2015-08-30	spatial	Functions for Kriging and Point Pattern Analysis
2015-08-29	dml	Distance Metric Learning in R
2015-08-29	FlexParamCurve	Tools to Fit Flexible Parametric Curves
2015-08-28	ALTopt	Optimal Experimental Designs for Accelerated Life Testing
2015-08-28	cacIRT	Classification Accuracy and Consistency under Item Response Theory
2015-08-28	detector	Detect Data Containing Personally Identifiable Information
2015-08-28	erboost	Nonparametric Multiple Expectile Regression via ER-Boost
2015-08-28	KERE	Expectile Regression in Reproducing Kernel Hilbert Space
2015-08-28	kin.cohort	Analysis of Kin-Cohort Studies
2015-08-28	lookupTable	Look-Up Tables using S4
2015-08-28	tmvtnorm	Truncated Multivariate Normal and Student t Distribution
2015-08-28	trimr	An Implementation of Common Response Time Trimming Methods
2015-08-27	intervals	Tools for Working with Points and Intervals
2015-08-27	lasvmR	A Simple Wrapper for the LASVM Solver
2015-08-27	support.CEs	Basic Functions for Supporting an Implementation of Choice Experiments
2015-08-26	ArArRedux	Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
2015-08-26	FastBandChol	Fast Estimation of a Covariance Matrix by Banding the Cholesky Factor
2015-08-26	gamlr	Gamma Lasso Regression
2015-08-26	generator	Generate Data Containing Fake Personally Identifiable Information
2015-08-26	mixor	Mixed-Effects Ordinal Regression Analysis
2015-08-26	SDDE	Shortcuts, Detours and Dead Ends (SDDE) Path Types in Genome Similarity Networks
2015-08-26	SurvRank	Rank Based Survival Modelling
2015-08-25	bimixt	Estimates Mixture Models for Case-Control Data
2015-08-25	compare	Comparing Objects for Differences
2015-08-25	contoureR	Contouring of Non-Regular Three-Dimensional Data
2015-08-25	fptdApprox	Approximation of First-Passage-Time Densities for Diffusion Processes
2015-08-25	ggplot2movies	Movies Data
2015-08-25	ica	Independent Component Analysis
2015-08-25	ONETr	Efficient Authenticated Interaction with the O*NET API
2015-08-25	optismixture	Optimal Mixture Weights in Multiple Importance Sampling
2015-08-25	SACOBRA	Self-Adjusting COBRA
2015-08-23	AutoModel	Automated Hierarchical Multiple Regression with Assumptions Checking
2015-08-23	GUIProfiler	Graphical User Interface for Rprof()
2015-08-23	qrcode	QRcode Generator for R
2015-08-23	R2jags	Using R to Run 'JAGS'
2015-08-23	snn	Stabilized Nearest Neighbor Classifier
2015-08-23	stocc	Fit a Spatial Occupancy Model via Gibbs Sampling
2015-08-22	blmeco	Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
2015-08-22	MatrixModels	Modelling with Sparse And Dense Matrices
2015-08-21	ifs	Iterated Function Systems
2015-08-21	NNTbiomarker	Calculate Design Parameters for Biomarker Validation Studies
2015-08-21	rsggm	Robust Sparse Gaussian Graphical Modeling via the Gamma-Divergence
2015-08-21	tvm	Time Value of Money Functions
2015-08-20	BlakerCI	Blaker's Binomial Confidence Limits
2015-08-20	gamclass	Functions and Data for a Course on Modern Regression and Classification
2015-08-20	GEVStableGarch	ARMA-GARCH/APARCH Models with GEV and Stable Distributions
2015-08-20	weirs	A Hydraulics Package to Compute Open-Channel Flow over Weirs
2015-08-19	distrom	Distributed Multinomial Regression
2015-08-19	iqLearn	Interactive Q-Learning
2015-08-19	labstatR	Libreria Del Laboratorio Di Statistica Con R
2015-08-19	LifeTables	Two-Parameter HMD Model Life Table System
2015-08-19	MetaSKAT	Meta Analysis for SNP-Set (Sequence) Kernel Association Test
2015-08-19	MLDS	Maximum Likelihood Difference Scaling
2015-08-19	REGENT	Risk Estimation for Genetic and Environmental Traits
2015-08-19	sensitivitymv	Sensitivity Analysis in Observational Studies
2015-08-19	spsi	Shape-Preserving Uni-Variate and Bi-Variate Spline Interpolation
2015-08-19	STI	Calculation of the Standardized Temperature Index
2015-08-19	textir	Inverse Regression for Text Analysis
2015-08-19	trajectories	Classes and Methods for Trajectory Data
2015-08-18	AFLPsim	Hybrid Simulation and Genome Scan for Dominant Markers
2015-08-18	ipw	Estimate Inverse Probability Weights
2015-08-18	phyndr	Matches Tip and Trait Data
2015-08-17	GeneralOaxaca	Blinder-Oaxaca Decomposition for Generalized Linear Model
2015-08-17	LotkasLaw	Runs Lotka's Law which is One of the Special Applications of Zipf's Law
2015-08-17	mixedMem	Tools for Discrete Multivariate Mixed Membership Models
2015-08-16	A3	Accurate, Adaptable, and Accessible Error Metrics for Predictive Models
2015-08-16	regexr	Readable Regular Expressions
2015-08-14	bootES	Bootstrap Effect Sizes
2015-08-14	diffIRT	Diffusion IRT Models for Response and Response Time Data
2015-08-14	RJafroc	Analysis of Data Acquired Using the Receiver Operating Characteristic Paradigm and Its Extensions
2015-08-13	ART	Aligned Rank Transform for Nonparametric Factorial Analysis
2015-08-13	geospt	Geostatistical Analysis and Design of Optimal Spatial Sampling Networks
2015-08-13	QuantifQuantile	Estimation of Conditional Quantiles using Optimal Quantization
2015-08-12	creditr	Credit Default Swaps in R
2015-08-12	hoa	Higher Order Likelihood Inference
2015-08-12	MDimNormn	Multi-Dimensional MA Normalization for Plate Effect
2015-08-12	MethylCapSig	Detection of Differentially Methylated Regions using MethylCap-Seq Data
2015-08-12	mmc	Multivariate Measurement Error Correction
2015-08-11	praise	Praise Users
2015-08-11	RateDistortion	Routines for Solving Rate-Distortion Problems
2015-08-11	restlos	Robust Estimation of Location and Scatter
2015-08-10	cusp	Cusp-Catastrophe Model Fitting Using Maximum Likelihood
2015-08-10	MixMAP	Implements the MixMAP Algorithm
2015-08-10	ocomposition	Regression for Rank-Indexed Compositional Data
2015-08-10	slfm	Tools for Fitting Sparse Latent Factor Model
2015-08-10	TapeR	Flexible Tree Taper Curves Based on Semiparametric Mixed Models
2015-08-10	threg	Threshold Regression
2015-08-09	JoSAE	Functions for some Unit-Level Small Area Estimators and their Variances
2015-08-09	perspectev	Permutation of Species During Turnover Events
2015-08-09	rafalib	Convenience Functions for Routine Data Exploration
2015-08-08	threewords	Represent Precise Coordinates in Three Words
2015-08-07	BCEs0	Bayesian Models for Cost-Effectiveness Analysis in the Presence of Structural Zero Costs
2015-08-07	ELYP	Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
2015-08-07	pid	Process Improvement using Data
2015-08-06	BMhyd	PCM for Hybridization
2015-08-06	CTTShiny	Classical Test Theory via Shiny
2015-08-06	hashr	Hash R Objects to Integers Fast
2015-08-06	HiClimR	Hierarchical Climate Regionalization
2015-08-06	LFDR.MLE	Estimation of the Local False Discovery Rates by Type II Maximum Likelihood Estimation
2015-08-06	pairwiseCI	Confidence Intervals for Two Sample Comparisons
2015-08-06	UsingR	Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
2015-08-05	credule	Credit Default Swap Functions
2015-08-05	PCA4TS	Segmenting Multiple Time Series by Contemporaneous Linear Transformation
2015-08-05	sdwd	Sparse Distance Weighted Discrimination
2015-08-05	W2CWM2C	A Graphical Tool for Wavelet (Cross) Correlation and Wavelet Multiple (Cross) Correlation Analysis
2015-08-04	BenfordTests	Statistical Tests for Evaluating Conformity to Benford's Law
2015-08-04	dr	Methods for Dimension Reduction for Regression
2015-08-04	yakmoR	A Simple Wrapper for the k-Means Library Yakmo
2015-08-03	ALS	Multivariate Curve Resolution Alternating Least Squares (MCR-ALS)
2015-08-03	kinship2	Pedigree Functions
2015-08-03	taber	Split and Recombine Your Data
2015-08-03	transcribeR	Automated Transcription of Audio Files Through the HP IDOL API
2015-08-02	fast	Implementation of the Fourier Amplitude Sensitivity Test (FAST)
2015-08-02	GeneNet	Modeling and Inferring Gene Networks
2015-08-01	gendist	Generated Probability Distribution Models
2015-07-31	Harvest.Tree	Harvest the Classification Tree
2015-07-31	iotools	I/O Tools for Streaming
2015-07-31	IsoGene	Order-Restricted Inference for Microarray Experiments
2015-07-31	MRQoL	Minimal Clinically Important Difference and Response Shift Effect for Health-Related Quality of Life
2015-07-31	multcompView	Visualizations of Paired Comparisons
2015-07-31	nlstools	Tools for Nonlinear Regression Analysis
2015-07-31	ORCME	Order Restricted Clustering for Microarray Experiments
2015-07-31	OTE	Optimal Trees Ensembles for Regression, Classification and Class Membership Probability Estimation
2015-07-31	phonTools	Tools for Phonetic and Acoustic Analyses
2015-07-31	rpca	RobustPCA: Decompose a Matrix into Low-Rank and Sparse Components
2015-07-30	nortest	Tests for Normality
2015-07-30	R2WinBUGS	Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
2015-07-30	randtoolbox	Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests
2015-07-30	signal	Signal Processing
2015-07-29	ClamR	Time Series Modeling for Climate Change Proxies
2015-07-29	FastRWeb	Fast Interactive Framework for Web Scripting Using R
2015-07-29	HistogramTools	Utility Functions for R Histograms
2015-07-29	lineup	Lining Up Two Sets of Measurements
2015-07-29	Pade	Padé Approximant Coefficients
2015-07-29	pco	Panel Cointegration Tests
2015-07-29	pweight	P-Value Weighting
2015-07-29	Rgnuplot	R Interface for Gnuplot
2015-07-29	RRNA	Secondary Structure Plotting for RNA
2015-07-29	twitteR	R Based Twitter Client
2015-07-29	webuse	Import Stata 'webuse' Datasets
2015-07-29	wiod	World Input Output Database 1995-2011
2015-07-28	base64enc	Tools for base64 encoding
2015-07-28	cpm	Sequential and Batch Change Detection Using Parametric and Nonparametric Methods
2015-07-28	MVA	An Introduction to Applied Multivariate Analysis with R
2015-07-28	ppiPre	Predict Protein-Protein Interactions Based on Functional and Topological Similarities
2015-07-28	QFRM	Pricing of Vanilla and Exotic Option Contracts
2015-07-28	RSclient	Client for Rserve
2015-07-28	uuid	Tools for generating and handling of UUIDs
2015-07-28	woe	Computes Weight of Evidence and Information Values
2015-07-27	dcGOR	Analysis of Ontologies and Protein Domain Annotations
2015-07-27	momr	Mining Metaomics Data (MetaOMineR)
2015-07-27	MPTinR	Analyze Multinomial Processing Tree Models
2015-07-27	phyext2	An Extension (for Package 'SigTree') of Some of the Classes in Package 'phylobase'
2015-07-27	qrage	Tools that Create D3 JavaScript Force Directed Graph from R
2015-07-27	rddtools	Toolbox for Regression Discontinuity Design ('RDD')
2015-07-27	spectrino	Spectra Visualization, Organizer and Data Preparation
2015-07-26	tglm	Binary Regressions under Independent Student-t Priors
2015-07-25	nonlinearTseries	Nonlinear Time Series Analysis
2015-07-25	VideoComparison	Video Comparison Tool
2015-07-24	aspect	A General Framework for Multivariate Analysis with Optimal Scaling
2015-07-24	isotone	Active Set and Generalized PAVA for Isotone Optimization
2015-07-24	modMax	Community Structure Detection via Modularity Maximization
2015-07-24	powerSurvEpi	Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies
2015-07-24	rEMM	Extensible Markov Model for Modelling Temporal Relationships Between Clusters
2015-07-24	RKlout	Fetch Klout Scores for Twitter Users
2015-07-23	BayesComm	Bayesian Community Ecology Analysis
2015-07-23	EstHer	Estimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection
2015-07-23	homals	Gifi Methods for Optimal Scaling
2015-07-23	mixPHM	Mixtures of Proportional Hazard Models
2015-07-23	munsellinterpol	Interpolate Munsell Renotation Data from Hue/Chroma to CIE/sRGB
2015-07-23	RaschSampler	Rasch Sampler
2015-07-23	saturnin	Spanning Trees Used for Network Inference
2015-07-23	SparseFactorAnalysis	Scaling Count and Binary Data with Sparse Factor Analysis
2015-07-22	EMMREML	Fitting Mixed Models with Known Covariance Structures
2015-07-22	favnums	A Dataset of Favourite Numbers
2015-07-22	gmodels	Various R Programming Tools for Model Fitting
2015-07-22	hybridHclust	Hybrid Hierarchical Clustering
2015-07-22	mri	Modified Rand Index (1 and 2.1 and 2.2) and Modified Adjusted Rand Index (1 and 2.1 and 2.2)
2015-07-22	PlotPrjNetworks	Useful Networking Tools for Project Management
2015-07-22	Rdistance	Distance Sampling Analyses
2015-07-20	far	Modelization for Functional AutoRegressive Processes
2015-07-20	GLSME	Generalized Least Squares with Measurement Error
2015-07-20	GNE	Computation of Generalized Nash Equilibria
2015-07-20	gumbel	The Gumbel-Hougaard Copula
2015-07-20	nbconvertR	Vignette Engine Wrapping IPython Notebooks
2015-07-20	PTAk	Principal Tensor Analysis on k Modes
2015-07-20	rhosp	Side Effect Risks in Hospital : Simulation and Estimation
2015-07-20	RTDE	Robust Tail Dependence Estimation
2015-07-20	SeqGrapheR	Simple GUI for Graph Based Visualization of Cluster of DNA Sequence Reads
2015-07-20	tsallisqexp	Tsallis q-Exp Distribution
2015-07-19	anoint	Analysis of Interactions
2015-07-19	glmgraph	Graph-Constrained Regularization for Sparse Generalized Linear Models
2015-07-19	nordklimdata1	Dataset for Climate Analysis with Data from the Nordic Region
2015-07-19	thermocouple	Temperature Measurement with Thermocouples, RTD and IC Sensors
2015-07-18	kappalab	Non-Additive Measure and Integral Manipulation Functions
2015-07-18	lpbrim	LP-BRIM Bipartite Modularity
2015-07-18	RAHRS	Data Fusion Filters for Attitude Heading Reference System (AHRS) with Several Variants of the Kalman Filter and the Mahoney and Madgwick Filters
2015-07-18	ruv	Detect and Remove Unwanted Variation using Negative Controls
2015-07-17	EDFIR	Estimating Discrimination Factors
2015-07-17	gamlss.demo	Demos for GAMLSS
2015-07-17	RSpincalc	Conversion Between Attitude Representations of DCM, Euler Angles, Quaternions, and Euler Vectors
2015-07-17	vertexenum	Vertex Enumeration of Polytopes
2015-07-16	captioner	Numbers Figures and Creates Simple Captions
2015-07-16	efflog	The Causal Effects for a Causal Loglinear Model
2015-07-16	ibelief	Belief Function Implementation
2015-07-16	IDTurtle	Identify Turtles by their Plastral Biometries
2015-07-16	rtiff	Read and Write TIFF Files
2015-07-16	sdPrior	Scale-Dependent Hyperpriors in Structured Additive Distributional Regression
2015-07-15	bcp	Bayesian Analysis of Change Point Problems
2015-07-15	crqa	Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series
2015-07-15	deducorrect	Deductive Correction, Deductive Imputation, and Deterministic Correction
2015-07-15	FuncMap	Hive Plots of R Package Function Calls
2015-07-15	kfigr	Integrated Code Chunk Anchoring and Referencing for R Markdown Documents
2015-07-15	locfdr	Computes Local False Discovery Rates
2015-07-15	ROMIplot	Plots Surfaces of Rates of Mortality Improvement
2015-07-15	ROptimizely	R Optimizely API
2015-07-15	verification	Weather Forecast Verification Utilities
2015-07-14	decode	Differential Co-Expression and Differential Expression Analysis
2015-07-14	HBglm	Hierarchical Bayesian Regression for GLMs
2015-07-14	polspline	Polynomial Spline Routines
2015-07-14	recommenderlabBX	Book-Crossing Dataset (BX) for 'recommenderlab'
2015-07-14	SoundexBR	Phonetic-Coding for Portuguese
2015-07-13	bootLR	Bootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests
2015-07-13	dynpred	Companion Package to "Dynamic Prediction in Clinical Survival Analysis"
2015-07-13	EstCRM	Calibrating Parameters for the Samejima's Continuous IRT Model
2015-07-13	igraphdata	A Collection of Network Data Sets for the 'igraph' Package
2015-07-13	prettyunits	Pretty, Human Readable Formatting of Quantities
2015-07-13	spareserver	Client Side Load Balancing
2015-07-12	appnn	Amyloid Propensity Prediction Neural Network
2015-07-12	fame	Interface for FAME Time Series Database
2015-07-12	MatchLinReg	Combining Matching and Linear Regression for Causal Inference
2015-07-12	WMCapacity	GUI Implementing Bayesian Working Memory Models
2015-07-11	operators	Additional Binary Operators
2015-07-11	penalizedLDA	Penalized Classification using Fisher's Linear Discriminant
2015-07-10	recoder	A Simple and Flexible Recoder
2015-07-10	RJaCGH	Reversible Jump MCMC for the Analysis of CGH Arrays
2015-07-10	scout	Implements the Scout Method for Covariance-Regularized Regression
2015-07-10	selectspm	Select Point Pattern Models Based on Minimum Contrast, AIC and Goodness of Fit
2015-07-09	Biodem	Biodemography Functions
2015-07-09	downloader	Download Files over HTTP and HTTPS
2015-07-09	penDvine	Flexible Pair-Copula Estimation in D-Vines using Bivariate Penalized Splines
2015-07-08	allanvar	Allan Variance Analysis
2015-07-08	aTSA	Alternative Time Series Analysis
2015-07-08	Benchmarking	Benchmark and Frontier Analysis Using DEA and SFA
2015-07-08	bigGP	Distributed Gaussian Process Calculations
2015-07-08	binda	Multi-Class Discriminant Analysis using Binary Predictors
2015-07-08	cccrm	Concordance Correlation Coefficient for Repeated (and Non-Repeated) Measures
2015-07-08	crossval	Generic Functions for Cross Validation
2015-07-08	fdrtool	Estimation of (Local) False Discovery Rates and Higher Criticism
2015-07-08	GSM	Gamma Shape Mixture
2015-07-08	HWEintrinsic	Objective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem
2015-07-08	icsw	Inverse Compliance Score Weighting
2015-07-08	LogisticDx	Diagnostic Tests for Models with a Binomial Response
2015-07-08	longitudinal	Analysis of Multiple Time Course Data
2015-07-08	mederrRank	Bayesian Methods for Identifying the Most Harmful Medication Errors
2015-07-08	PopVar	Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation
2015-07-08	sae	Small Area Estimation
2015-07-08	sda	Shrinkage Discriminant Analysis and CAT Score Variable Selection
2015-07-08	spatialCovariance	Computation of Spatial Covariance Matrices for Data on Rectangles
2015-07-08	sperich	Auxiliary Functions to Estimate Centers of Biodiversity
2015-07-08	st	Shrinkage t Statistic and Correlation-Adjusted t-Score
2015-07-08	StatDataML	Read and Write StatDataML Files
2015-07-08	tailloss	Estimate the Probability in the Upper Tail of the Aggregate Loss Distribution
2015-07-08	tspmeta	Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem
2015-07-08	vardiag	Variogram Diagnostics
2015-07-08	wskm	Weighted k-Means Clustering
2015-07-07	futile.any	A Tiny Utility Providing Polymorphic Operations
2015-07-07	SocialPosition	Social Position Indicators Construction Toolbox
2015-07-06	iBATCGH	Integrative Bayesian Analysis of Transcriptomic and CGH Data
2015-07-06	SamplerCompare	A Framework for Comparing the Performance of MCMC Samplers
2015-07-06	sdef	Synthesizing List of Differentially Expressed Features
2015-07-05	baseline	Baseline Correction of Spectra
2015-07-05	gromovlab	Gromov-Hausdorff Type Distances for Labeled Metric Spaces
2015-07-05	rredis	"Redis" Key/Value Database Client
2015-07-04	forams	Foraminifera and Community Ecology Analyses
2015-07-04	Interatrix	Compute Chi-Square Measures with Corrections
2015-07-04	kinfit	Routines for Fitting Kinetic Models to Chemical Degradation Data
2015-07-04	nat.utils	File System Utility Functions for 'NeuroAnatomy Toolbox'
2015-07-04	OrdFacReg	Least Squares, Logistic, and Cox-Regression with Ordered Predictors
2015-07-04	reporttools	Generate LaTeX Tables of Descriptive Statistics
2015-07-04	trust	Trust Region Optimization
2015-07-04	VTrack	A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data
2015-07-03	abd	The Analysis of Biological Data
2015-07-03	DSL	Distributed Storage and List
2015-07-03	geo	Draw and Annotate Maps, Especially Charts of the North Atlantic
2015-07-03	hive	Hadoop InteractiVE
2015-07-03	logcondiscr	Estimate a Log-Concave Probability Mass Function from Discrete i.i.d. Observations
2015-07-03	modehunt	Multiscale Analysis for Density Functions
2015-07-03	powerGWASinteraction	Power Calculations for GxE and GxG Interactions for GWAS
2015-07-03	rseedcalc	Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing
2015-07-03	selectMeta	Estimation of Weight Functions in Meta Analysis
2015-07-03	spd	Semi Parametric Distribution
2015-07-03	tagcloud	Tag Clouds
2015-07-03	tileHMM	Hidden Markov Models for ChIP-on-Chip Analysis
2015-07-02	arulesNBMiner	Mining NB-Frequent Itemsets and NB-Precise Rules
2015-07-02	autoencoder	Sparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data
2015-07-02	gsscopu	Copula Density and 2-D Hazard Estimation using Smoothing Splines
2015-07-02	NHANES	Data from the US National Health and Nutrition Examination Study
2015-07-02	SRCS	Statistical Ranking Color Scheme for Multiple Pairwise Comparisons
2015-07-02	translation.ko	R Manuals Literally Translated in Korean
2015-07-01	autovarCore	Automated Vector Autoregression Models and Networks
2015-07-01	bayesmix	Bayesian Mixture Models with JAGS
2015-07-01	causalsens	Selection Bias Approach to Sensitivity Analysis for Causal Effects
2015-07-01	CompR	Paired Comparison Data Analysis
2015-07-01	MiRSEA	'MicroRNA' Set Enrichment Analysis
2015-07-01	spectralGP	Approximate Gaussian Processes Using the Fourier Basis
2015-06-30	climdex.pcic	PCIC Implementation of Climdex Routines
2015-06-30	Maeswrap	Wrapper Functions for MAESTRA/MAESPA
2015-06-29	ddeploy	Wrapper for the Duke Deploy REST API
2015-06-29	gee	Generalized Estimation Equation Solver
2015-06-29	KernSmooth	Functions for Kernel Smoothing Supporting Wand & Jones (1995)
2015-06-28	cvxbiclustr	Convex Biclustering Algorithm
2015-06-28	ordinal	Regression Models for Ordinal Data
2015-06-27	ElemStatLearn	Data Sets, Functions and Examples from the Book: "The Elements of Statistical Learning, Data Mining, Inference, and Prediction" by Trevor Hastie, Robert Tibshirani and Jerome Friedman
2015-06-27	knitLatex	'Knitr' Helpers - Mostly Tables
2015-06-27	LncMod	Predicting Modulator and Functional/Survival Analysis
2015-06-26	asypow	Calculate Power Utilizing Asymptotic Likelihood Ratio Methods
2015-06-26	Bagidis	BAses GIving DIStances
2015-06-26	parallelML	A Parallel-Voting Algorithm for many Classifiers
2015-06-26	parallelSVM	A Parallel-Voting Version of the Support-Vector-Machine Algorithm
2015-06-26	SenSrivastava	Datasets from Sen & Srivastava
2015-06-26	sorvi	Finnish Open Government Data Toolkit
2015-06-26	TSMining	Mining Univariate and Multivariate Motifs in Time-Series Data
2015-06-26	unbalanced	Racing for Unbalanced Methods Selection
2015-06-25	learnstats	An Interactive Environment for Learning Statistics
2015-06-25	XMRF	Markov Random Fields for High-Throughput Genetics Data
2015-06-24	BSGS	Bayesian Sparse Group Selection
2015-06-24	ColorPalette	Color Palettes Generator
2015-06-24	EpiBayes	Implements Hierarchical Bayesian Models for Epidemiological Applications
2015-06-24	geospacom	Facilitate Generating of Distance Matrices Used in Package 'spacom' and Plotting Data on Maps
2015-06-24	prc	Paired Response Curve
2015-06-24	pscore	Standardizing Physiological Composite Risk Endpoints
2015-06-24	runittotestthat	Convert 'RUnit' Test Functions into 'testthat' Tests
2015-06-23	geosptdb	Spatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression
2015-06-23	pcaBootPlot	Create 2D Principal Component Plots with Bootstrapping
2015-06-23	selfea	Select Features Reliably with Cohen's Effect Sizes
2015-06-23	ssanv	Sample Size Adjusted for Nonadherence or Variability of Input Parameters
2015-06-23	translateSPSS2R	Toolset for Translating SPSS-Syntax to R-Code
2015-06-22	biplotbootGUI	Bootstrap on Classical Biplots and Clustering Disjoint Biplot
2015-06-22	cherry	Multiple Testing Methods for Exploratory Research
2015-06-22	import	An Import Mechanism for R
2015-06-22	metaLik	Likelihood Inference in Meta-Analysis and Meta-Regression Models
2015-06-22	primes	Generate and Test for Prime Numbers
2015-06-22	rAvis	Interface to the Bird-Watching Dataset Proyecto AVIS
2015-06-22	sbmSDP	Semidefinite Programming for Fitting Block Models of Equal Block Sizes
2015-06-21	cncaGUI	Canonical Non-Symmetrical Correspondence Analysis in R
2015-06-21	FAMILY	A Convex Formulation for Modeling Interactions with Strong Heredity
2015-06-20	crrp	Penalized Variable Selection in Competing Risks Regression
2015-06-19	multibiplotGUI	Multibiplot Analysis in R
2015-06-19	Sejong	KoNLP static dictionaries and Sejong project resources
2015-06-18	GPLTR	Generalized Partially Linear Tree-Based Regression Model
2015-06-18	james.analysis	Analysis Tools for the 'JAMES' Framework
2015-06-17	ICC	Facilitating Estimation of the Intraclass Correlation Coefficient
2015-06-17	MM2Sdata	Gene Expression Datasets for the 'MM2S' Package
2015-06-16	CommT	Comparative Phylogeographic Analysis using the Community Tree Framework
2015-06-16	gridGraphviz	Drawing Graphs with 'grid'
2015-06-16	repijson	Tools for Handling EpiJSON (Epidemiology Data) Files
2015-06-16	TMDb	Access to TMDb API - Apiary
2015-06-15	BaBooN	Bayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data
2015-06-15	DiceDesign	Designs of Computer Experiments
2015-06-15	DiceEval	Construction and Evaluation of Metamodels
2015-06-15	kolmim	An Improved Evaluation of Kolmogorov's Distribution
2015-06-15	MSIseq	Assess Tumor Microsatellite Instability with a Decision Tree Classifier from Exome Somatic Mutations
2015-06-15	rfigshare	An R Interface to 'figshare'
2015-06-15	sgRSEA	Enrichment Analysis of CRISPR/Cas9 Knockout Screen Data
2015-06-14	beepr	Easily Play Notification Sounds on any Platform
2015-06-14	blme	Bayesian Linear Mixed-Effects Models
2015-06-14	mmtfa	Model-Based Clustering and Classification with Mixtures of Modified t Factor Analyzers
2015-06-13	hierband	Convex Banding of the Covariance Matrix
2015-06-12	nodeHarvest	Node Harvest for Regression and Classification
2015-06-12	strum	STRUctural Modeling of Latent Variables for General Pedigree
2015-06-11	editrules	Parsing, Applying, and Manipulating Data Cleaning Rules
2015-06-11	EntropyExplorer	Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression
2015-06-11	ergm.graphlets	ERG Modeling Based on Graphlet Properties
2015-06-11	LTPDvar	LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables
2015-06-10	P2C2M	Posterior Predictive Checks of Coalescent Models
2015-06-10	parallelMap	Unified Interface to Parallelization Back-Ends
2015-06-10	ssfa	Spatial Stochastic Frontier Analysis
2015-06-09	DNMF	Discriminant Non-Negative Matrix Factorization
2015-06-09	patchDVI	Package to Patch .dvi or .synctex Files
2015-06-09	RcppFaddeeva	'Rcpp' Bindings for the 'Faddeeva' Package
2015-06-09	rknn	Random KNN Classification and Regression
2015-06-07	ISwR	Introductory Statistics with R
2015-06-06	BayesGESM	Bayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models
2015-06-06	nestedRanksTest	Mann-Whitney-Wilcoxon Test for Nested Ranks
2015-06-06	strucchange	Testing, Monitoring, and Dating Structural Changes
2015-06-05	seismic	Predict Information Cascade by Self-Exciting Point Process
2015-06-04	kineticF	Framework for the Analysis of Kinetic Visual Field Data
2015-06-04	SAENET	A Stacked Autoencoder Implementation with Interface to 'neuralnet'
2015-06-03	delt	Estimation of Multivariate Densities Using Adaptive Partitions
2015-06-03	EnviroStat	Statistical Analysis of Environmental Space-Time Processes
2015-06-03	kwb.hantush	Calculation of Groundwater Mounding Beneath an Infiltration Basin
2015-06-03	score	A Package to Score Behavioral Questionnaires
2015-06-03	surveyeditor	Generate a Survey that can be Completed by Survey Respondents
2015-06-03	XHWE	X Chromosome Hardy-Weinberg Equilibrium
2015-06-02	bootSVD	Fast, Exact Bootstrap Principal Component Analysis for High Dimensional Data
2015-06-02	cccd	Class Cover Catch Digraphs
2015-06-02	evolvability	Calculation of Evolvability Parameters
2015-06-02	FAOSTAT	Download Data from the FAOSTAT Database of the Food and Agricultural Organization (FAO) of the United Nations
2015-06-02	HapEstXXR	Multi-Locus Stepwise Regression
2015-06-02	JBTools	Misc Small Tools and Helper Functions for Other Code of J. Buttlar
2015-06-02	spanel	Spatial Panel Data Models
2015-06-02	spectral.methods	Singular Spectrum Analysis (SSA) Tools for Time Series Analysis
2015-06-01	dkDNA	Diffusion Kernels on a Set of Genotypes
2015-06-01	Iso	Functions to Perform Isotonic Regression
2015-05-31	coefficientalpha	Robust Coefficient Alpha and Omega with Missing and Non-Normal Data
2015-05-31	TDAmapper	Analyze High-Dimensional Data Using Discrete Morse Theory
2015-05-30	ExtDist	Extending the Range of Functions for Probability Distributions
2015-05-30	hybridEnsemble	Build, Deploy and Evaluate Hybrid Ensembles
2015-05-30	RcellData	Example Dataset for 'Rcell' Package
2015-05-30	signmedian.test	Perform Exact Sign Test and Asymptotic Sign Test in Large Samples
2015-05-29	dostats	Compute Statistics Helper Functions
2015-05-29	esaBcv	Estimate Number of Latent Factors and Factor Matrix for Factor Analysis
2015-05-29	fdakma	Functional Data Analysis: K-Mean Alignment
2015-05-29	gtools	Various R Programming Tools
2015-05-29	ncdf.tools	Easier 'NetCDF' File Handling
2015-05-29	rprime	Functions for Working with 'Eprime' Text Files
2015-05-29	RSPS	RNA-Seq Power Simulation
2015-05-28	AGD	Analysis of Growth Data
2015-05-28	loopr	Uses an Archive to Amend Previous Stages of a Pipe using Current Output
2015-05-28	packS4	Toy Example of S4 Package
2015-05-27	BACA	Bubble Chart to Compare Biological Annotations by using DAVID
2015-05-27	empiricalFDR.DESeq2	Simulation-Based False Discovery Rate in RNA-Seq
2015-05-26	NMF	Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
2015-05-26	reval	Repeated Function Evaluation for Sensitivity Analysis
2015-05-23	restimizeapi	Functions for Working with the 'www.estimize.com' Web Services
2015-05-22	bcv	Cross-Validation for the SVD (Bi-Cross-Validation)
2015-05-22	dataview	Data and Workspace Browser for Terminals
2015-05-22	denpro	Visualization of Multivariate Functions, Sets, and Data
2015-05-22	frbs	Fuzzy Rule-Based Systems for Classification and Regression Tasks
2015-05-22	mvmeta	Multivariate and Univariate Meta-Analysis and Meta-Regression
2015-05-22	tmle.npvi	Targeted Learning of a NP Importance of a Continuous Exposure
2015-05-21	LDPD	Probability of Default Calibration
2015-05-21	ordPens	Selection and/or Smoothing of Ordinal Predictors
2015-05-21	qdapDictionaries	Dictionaries and Word Lists for the 'qdap' Package
2015-05-21	R0	Estimation of R0 and Real-Time Reproduction Number from Epidemics
2015-05-21	riceware	A Diceware Passphrase Implementation
2015-05-21	xtermStyle	Terminal Text Formatting Using Escape Sequences
2015-05-20	ARTIVA	Time-Varying DBN Inference with the ARTIVA (Auto Regressive TIme VArying) Model
2015-05-20	bigml	Bindings for the BigML API
2015-05-20	CausalFX	Methods for Estimating Causal Effects from Observational Data
2015-05-20	clustertend	Check the Clustering Tendency
2015-05-20	shapeR	Collection and Analysis of Otolith Shape Data
2015-05-20	SubpathwayGMir	Identify Metabolic Subpathways Mediated by MicroRNAs
2015-05-20	TickExec	Execution Functions for Tick Data Back Test
2015-05-20	VIGoR	Variational Bayesian Inference for Genome-Wide Regression
2015-05-19	FastHCS	Robust Algorithm for Principal Component Analysis
2015-05-19	greyzoneSurv	Fit a Grey-Zone Model with Survival Data
2015-05-19	IATscores	Implicit Association Test Scores Using Robust Statistics
2015-05-19	novelist	NOVEL Integration of the Sample and Thresholded (NOVELIST) Correlation and Covariance Estimators
2015-05-19	QCAfalsePositive	Tests for Type I Error in Qualitative Comparative Analysis (QCA)
2015-05-19	rivervis	River Visualisation Tool
2015-05-18	MInt	Learn Direct Interaction Networks
2015-05-18	ocedata	Oceanographic Datasets for Oce
2015-05-18	supcluster	Supervised Cluster Analysis
2015-05-16	TTmoment	Sampling and Calculating the First and Second Moments for the Doubly Truncated Multivariate t Distribution
2015-05-15	CatDyn	Fishery Stock Assessment by Generalized Depletion Models
2015-05-15	NEff	Calculating Effective Sizes Based on Known Demographic Parameters of a Population
2015-05-15	pmr	Probability Models for Ranking Data
2015-05-15	rsem	Robust Structural Equation Modeling with Missing Data and Auxiliary Variables
2015-05-14	geoscale	Geological Time Scale Plotting
2015-05-14	MCTM	Markov Chains Transition Matrices
2015-05-13	FeaLect	Scores Features for Feature Selection
2015-05-13	stackoverflow	Stack Overflow's Greatest Hits
2015-05-12	accelerometry	Functions for Processing Minute-to-Minute Accelerometer Data
2015-05-12	biclust	BiCluster Algorithms
2015-05-12	DSviaDRM	Exploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms
2015-05-12	fastHICA	Hierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis
2015-05-12	stagePop	Modelling the Population Dynamics of a Stage-Structured Species in Continuous Time
2015-05-11	boilerpipeR	Interface to the Boilerpipe Java Library
2015-05-11	GB2	Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation
2015-05-11	hapassoc	Inference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm
2015-05-11	mglmn	Model Averaging for Multivariate GLM with Null Models
2015-05-11	probFDA	Probabilistic Fisher Discriminant Analysis
2015-05-11	tm.plugin.webmining	Retrieve Structured, Textual Data from Various Web Sources
2015-05-10	csn	Closed Skew-Normal Distribution
2015-05-09	aprean3	Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998)
2015-05-08	asVPC	Average Shifted Visual Predictive Checks
2015-05-08	lsa	Latent Semantic Analysis
2015-05-07	dummy	Automatic Creation of Dummies with Support for Predictive Modeling
2015-05-07	fishmove	Prediction of Fish Movement Parameters
2015-05-07	groc	Generalized Regression on Orthogonal Components
2015-05-07	RImageJROI	Read 'ImageJ' Region of Interest (ROI) Files
2015-05-06	Scale	Likert Type Questionnaire Item Analysis
2015-05-05	abc	Tools for Approximate Bayesian Computation (ABC)
2015-05-05	abc.data	Data Only: Tools for Approximate Bayesian Computation (ABC)
2015-05-05	hiertest	Convex Hierarchical Testing of Interactions
2015-05-05	LocFDRPois	Functions for Performing Local FDR Estimation when Null and Alternative are Poisson
2015-05-05	optifunset	Set Options if Unset
2015-05-05	reGenotyper	Detecting Mislabeled Samples in Genetic Data
2015-05-05	structSSI	Multiple Testing for Hypotheses with Hierarchical or Group Structure
2015-05-04	clustering.sc.dp	Optimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint
2015-05-04	parboost	Distributed Model-Based Boosting
2015-05-04	RANN.L1	Fast Nearest Neighbour Search (Wraps ANN Library) Using L1 Metric
2015-05-03	EW	Edgeworth Expansion
2015-05-02	coxinterval	Cox-Type Models for Interval-Censored Data
2015-05-02	EvalEst	Dynamic Systems Estimation - Extensions
2015-05-02	GDAdata	Datasets for the Book Graphical Data Analysis with R
2015-05-02	ig.vancouver.2014.topcolour	Instagram 2014 Vancouver Top Colour Dataset
2015-05-02	mixtNB	DE Analysis of RNA-Seq Data by Mixtures of NB
2015-05-02	muir	Exploring Data with Tree Data Structures
2015-05-02	survJamda.data	Data for Package 'survJambda'
2015-05-01	CDNmoney	Components of Canadian Monetary and Credit Aggregates
2015-05-01	TScompare	'TSdbi' Database Comparison
2015-05-01	tsfa	Time Series Factor Analysis
2015-05-01	uniftest	Tests for Uniformity
2015-04-30	bspec	Bayesian Spectral Inference
2015-04-30	constrainedKriging	Constrained, Covariance-Matching Constrained and Universal Point or Block Kriging
2015-04-30	rCMA	R-to-Java Interface for 'CMA-ES'
2015-04-30	TSfame	'TSdbi' Extensions for Fame
2015-04-30	TSMySQL	'TSdbi' Extensions for 'MySQL'
2015-04-30	TSodbc	'TSdbi' Extensions for ODBC
2015-04-30	TSPostgreSQL	'TSdbi' Extensions for 'PostgreSQL'
2015-04-30	TSSQLite	'TSdbi' Extensions for 'SQLite'
2015-04-29	BCRA	Breast Cancer Risk Assessment
2015-04-29	dcemriS4	A Package for Image Analysis of DCE-MRI (S4 Implementation)
2015-04-29	GWLelast	Geographically Weighted Logistic Elastic Net Regression
2015-04-29	NPMLEcmprsk	Type-Specific Failure Rate and Hazard Rate on Competing Risks Data
2015-04-29	synbreedData	Data for the Synbreed Package
2015-04-29	TeachingSampling	Selection of Samples and Parameter Estimation in Finite Population
2015-04-29	uniqtag	Abbreviate Strings to Short, Unique Identifiers
2015-04-28	pairsD3	D3 Scatterplot Matrices
2015-04-28	pgmm	Parsimonious Gaussian Mixture Models
2015-04-28	simpleNeural	An Easy to Use Multilayer Perceptron
2015-04-28	timetree	Interface to the TimeTree of Life Webpage
2015-04-27	fracprolif	Fraction Proliferation via a Quiescent Growth Model
2015-04-27	mded	Measuring the Difference Between Two Empirical Distributions
2015-04-27	migui	Graphical User Interface to the 'mi' Package
2015-04-27	seqDesign	Simulation and Group Sequential Monitoring of Randomized Two-Stage Treatment Efficacy Trials with Time-to-Event Endpoints
2015-04-27	StatDA	Statistical Analysis for Environmental Data
2015-04-26	haplotypes	Haplotype Inference and Statistical Analysis of Genetic Variation
2015-04-24	DiceKriging	Kriging Methods for Computer Experiments
2015-04-23	LinRegInteractive	Interactive Interpretation of Linear Regression Models
2015-04-22	emg	Exponentially Modified Gaussian (EMG) Distribution
2015-04-22	GCD	Global Charcoal Database
2015-04-22	gnm	Generalized Nonlinear Models
2015-04-22	mapStats	Geographic Display of Survey Data Statistics
2015-04-22	probemod	Statistical Tools for Probing Moderation Effects
2015-04-22	treeperm	Exact and Asymptotic K Sample Permutation Test
2015-04-21	blockmodels	Latent and Stochastic Block Model Estimation by a 'V-EM' Algorithm
2015-04-21	ensurer	Ensure Values at Runtime
2015-04-21	GENLIB	Genealogical Data Analysis
2015-04-21	managelocalrepo	Manage a CRAN-Style Local Repository
2015-04-20	bayescount	Power Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC
2015-04-20	oro.dicom	Rigorous - DICOM Input / Output
2015-04-20	prevalence	Tools for Prevalence Assessment Studies
2015-04-20	synRNASeqNet	Synthetic RNA-Seq Network Generation and Mutual Information Estimates
2015-04-19	BNPTSclust	A Bayesian Nonparametric Algorithm for Time Series Clustering
2015-04-19	degreenet	Models for Skewed Count Distributions Relevant to Networks
2015-04-19	PortfolioAnalytics	Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios
2015-04-19	R1magic	Compressive Sampling: Sparse Signal Recovery Utilities
2015-04-18	BivarP	Estimating the Parameters of Some Bivariate Distributions
2015-04-18	datacheck	Tools for Checking Data Consistency
2015-04-18	MATA	Model-Averaged Tail Area Wald (MATA-Wald) Confidence Interval
2015-04-18	TKF	Pairwise Distance Estimation with TKF91 and TKF92 Model
2015-04-17	marl	Multivariate Analysis Based on Relative Likelihoods
2015-04-17	VLMC	Variable Length Markov Chains ('VLMC') Models
2015-04-16	dga	Capture-Recapture Estimation using Bayesian Model Averaging
2015-04-16	mi	Missing Data Imputation and Model Checking
2015-04-16	networksis	Simulate Bipartite Graphs with Fixed Marginals Through Sequential Importance Sampling
2015-04-16	qclust	Robust Estimation of Gaussian Mixture Models
2015-04-16	smoother	Functions Relating to the Smoothing of Numerical Data
2015-04-15	cernn	Covariance Estimation Regularized by Nuclear Norm Penalties
2015-04-15	REST	RcmdrPlugin Easy Script Templates
2015-04-15	rmaf	Refined Moving Average Filter
2015-04-15	SPRT	Wald's Sequential Probability Ratio Test
2015-04-14	bild	BInary Longitudinal Data
2015-04-14	CRTSize	Sample Size Estimation Functions for Cluster Randomized Trials
2015-04-14	MissMech	Testing Homoscedasticity, Multivariate Normality, and Missing Completely at Random
2015-04-13	fCertificates	Basics of Certificates and Structured Products Valuation
2015-04-13	HiLMM	Estimation of Heritability in Linear Mixed Models
2015-04-13	inline	Functions to Inline C, C++, Fortran Function Calls from R
2015-04-13	NbClust	Determining the Best Number of Clusters in a Data Set
2015-04-13	rstackdeque	Persistent Fast Amortized Stack and Queue Data Structures
2015-04-13	smds	Symbolic Multidimensional Scaling
2015-04-12	csrplus	Methods to Test Hypotheses on the Distribution of Spatial Point Processes
2015-04-12	heatmap3	An Improved Heatmap Package
2015-04-12	MPV	Data Sets from Montgomery, Peck and Vining's Book
2015-04-12	resample	Resampling Functions
2015-04-11	fdth	Frequency Distribution Tables, Histograms and Polygons
2015-04-11	lvm4net	Latent Variable Models for Networks
2015-04-11	msSurv	Nonparametric Estimation for Multistate Models
2015-04-10	BayesLCA	Bayesian Latent Class Analysis
2015-04-10	bentcableAR	Bent-Cable Regression for Independent Data or Autoregressive Time Series
2015-04-10	chipPCR	Toolkit of Helper Functions to Pre-Process Amplification Data
2015-04-10	pocrm	Dose Finding in Drug Combination Phase I Trials Using PO-CRM
2015-04-09	expsmooth	Data Sets from "Forecasting with Exponential Smoothing"
2015-04-09	groupRemMap	Regularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty
2015-04-08	CIDnetworks	Generative Models for Complex Networks with Conditionally Independent Dyadic Structure
2015-04-08	cqrReg	Quantile, Composite Quantile Regression and Regularized Versions
2015-04-08	searchable	Tools for Custom Searches / Subsets / Slices of Named R Objects
2015-04-08	softImpute	Matrix Completion via Iterative Soft-Thresholded SVD
2015-04-05	RcppRoll	Efficient Rolling / Windowed Operations
2015-04-04	EFDR	Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
2015-04-04	SOUP	Stochastic Ordering Using Permutations (and Pairwise Comparisons)
2015-04-04	timeseriesdb	Manage Time Series with R and PostgreSQL
2015-04-03	EcoSimR	Null Model Analysis for Ecological Data
2015-04-03	RKEA	R/KEA Interface
2015-04-03	thsls	Three-Stage Least Squares Estimation for Systems of Simultaneous Equations
2015-04-02	DiffCorr	Analyzing and Visualizing Differential Correlation Networks in Biological Data
2015-04-02	GPfit	Gaussian Processes Modeling
2015-04-02	HighDimOut	Outlier Detection Algorithms for High-Dimensional Data
2015-04-02	maptpx	MAP Estimation of Topic Models
2015-04-02	PermAlgo	Permutational Algorithm to Simulate Survival Data
2015-04-02	sybilccFBA	Cost Constrained FLux Balance Analysis: MetabOlic Modeling with ENzyme kineTics (MOMENT)
2015-04-01	HarmonicRegression	Harmonic Regression to One or more Time Series
2015-04-01	KMDA	Kernel-Based Metabolite Differential Analysis
2015-04-01	Laterality	Functions to Calculate Common Laterality Statistics in Primatology
2015-03-31	DatABEL	File-Based Access to Large Matrices Stored on HDD in Binary Format
2015-03-31	longclust	Model-Based Clustering and Classification for Longitudinal Data
2015-03-31	MatchingFrontier	Computation of the Balance - Sample Size Frontier in Matching Methods for Causal Inference
2015-03-31	MethComp	Functions for Analysis of Agreement in Method Comparison Studies
2015-03-31	orthogonalsplinebasis	Orthogonal B-Spline Basis Functions
2015-03-31	shinyBS	Twitter Bootstrap Components for Shiny
2015-03-30	Ake	Associated Kernel Estimations
2015-03-30	TFDEA	Technology Forecasting using DEA (Data Envelopment Analysis)
2015-03-30	VdgRsm	Plots of Scaled Prediction Variances for Response Surface Designs
2015-03-27	AutoSEARCH	General-to-Specific (GETS) Modelling
2015-03-27	LPStimeSeries	Learned Pattern Similarity and Representation for Time Series
2015-03-27	SAMUR	Stochastic Augmentation of Matched Data Using Restriction Methods
2015-03-27	StatMeasures	Easy Data Manipulation, Data Quality and Statistical Checks
2015-03-26	kmodR	K-Means with Simultaneous Outlier Detection
2015-03-26	ROCR	Visualizing the Performance of Scoring Classifiers
2015-03-25	pheno2geno	High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
2015-03-25	timeROC	Time-Dependent ROC Curve and AUC for Censored Survival Data
2015-03-25	tumblR	Access to Tumblr v2 API
2015-03-24	mapfit	A Tool for PH/MAP Parameter Estimation
2015-03-24	rgexf	Build, Import and Export GEXF Graph Files
2015-03-23	mht	Multiple Hypothesis Testing for Variable Selection in High-Dimensional Linear Models
2015-03-22	psd	Adaptive, Sine-Multitaper Power Spectral Density Estimation
2015-03-20	hierDiversity	Hierarchical Multiplicative Partitioning of Complex Phenotypes
2015-03-20	prais	Prais-Winsten Estimation Procedure for AR(1) Serial Correlation
2015-03-19	bisoreg	Bayesian Isotonic Regression with Bernstein Polynomials
2015-03-19	mcmcplots	Create Plots from MCMC Output
2015-03-18	CARLIT	Ecological Quality Ratios Calculation and Plot
2015-03-18	jtrans	Johnson Transformation for Normality
2015-03-18	saccades	Detection of Fixations in Eye-Tracking Data
2015-03-17	DCluster	Functions for the Detection of Spatial Clusters of Diseases
2015-03-17	rsatscan	Tools, Classes, and Methods for Interfacing with SaTScan Stand-Alone Software
2015-03-17	staTools	Statistical Tools for Social Network Analysis
2015-03-16	genalg	R Based Genetic Algorithm
2015-03-16	gvcm.cat	Regularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs
2015-03-15	jmetrik	Tools for Interacting with 'jMetrik'
2015-03-15	metaMix	Bayesian Mixture Analysis for Metagenomic Community Profiling
2015-03-15	NHPoisson	Modelling and Validation of Non Homogeneous Poisson Processes
2015-03-15	separationplot	Separation Plots
2015-03-13	betas	Standardized Beta Coefficients
2015-03-13	boottol	Bootstrap Tolerance Levels for Credit Scoring Validation Statistics
2015-03-13	funFEM	Clustering in the Discriminative Functional Subspace
2015-03-12	GWAF	Genome-Wide Association/Interaction Analysis and Rare Variant Analysis with Family Data
2015-03-12	nparcomp	Multiple Comparisons and Simultaneous Confidence Intervals
2015-03-11	blatr	Send Emails Using 'Blat' for Windows
2015-03-11	MCL	Markov Cluster Algorithm
2015-03-11	multigroup	Multigroup Data Analysis
2015-03-11	NORRRM	Geochemical Toolkit for R
2015-03-10	binr	Cut Numeric Values into Evenly Distributed Groups
2015-03-10	EIAdata	R Wrapper for the Energy Information Administration (EIA) API
2015-03-10	relevent	Relational Event Models
2015-03-10	RVFam	Rare Variants Association Analyses with Family Data
2015-03-09	informR	Sequence Statistics for Relational Event Models
2015-03-08	csvread	Fast Specialized CSV File Loader
2015-03-07	SID	Structural Intervention Distance
2015-03-06	alabama	Constrained Nonlinear Optimization
2015-03-06	recluster	Ordination Methods for the Analysis of Beta-Diversity Indices
2015-03-05	CAM	Causal Additive Model (CAM)
2015-03-05	DAMOCLES	Dynamic Assembly Model of Colonization, Local Extinction and Speciation
2015-03-05	gtop	Game-Theoretically OPtimal (GTOP) Reconciliation Method
2015-03-04	abf2	Load Gap-Free Axon ABF2 Files
2015-03-04	monreg	Nonparametric Monotone Regression
2015-03-03	BayesSummaryStatLM	MCMC Sampling of Bayesian Linear Models via Summary Statistics
2015-03-03	BOG	Bacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions
2015-03-03	coalescentMCMC	MCMC Algorithms for the Coalescent
2015-03-03	FieldSim	Random Fields (and Bridges) Simulations
2015-03-03	hornpa	Horn's (1965) Test to Determine the Number of Components/Factors
2015-03-03	LPTime	LP Nonparametric Approach to Non-Gaussian Non-Linear Time Series Modelling
2015-03-03	NAPPA	Performs the Processing and Normalisation of Nanostring miRNA and mRNA Data
2015-03-03	NSUM	Network Scale Up Method
2015-03-03	RcmdrPlugin.EACSPIR	Plugin de R-Commander para el Manual 'EACSPIR'
2015-03-03	simMSM	Simulation of Event Histories for Multi-State Models
2015-03-03	stheoreme	Klimontovich's S-Theorem Algorithm Implementation and Data Preparation Tools
2015-03-02	IsingSampler	Sampling Methods and Distribution Functions for the Ising Model
2015-03-02	lsr	Companion to "Learning Statistics with R"
2015-03-02	PogromcyDanych	PogromcyDanych / DataCrunchers is the Masive Online Open Course that Brings R and Statistics to the People
2015-03-01	Conake	Continuous Associated Kernel Estimation
2015-03-01	gendata	Generate and Modify Synthetic Datasets
2015-02-28	laketemps	Lake Temperatures Collected by Situ and Satellite Methods from 1985-2009
2015-02-28	timma	Target Inhibition Interaction using Maximization and Minimization Averaging
2015-02-27	CoxRidge	Cox Models with Dynamic Ridge Penalties
2015-02-27	GenForImp	The Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data
2015-02-26	dplRCon	Concordance for Dendroclimatology
2015-02-26	FuzzyNumbers	Tools to Deal with Fuzzy Numbers
2015-02-26	gte	Generalized Turnbull's Estimator
2015-02-26	RcmdrPlugin.ROC	Rcmdr Receiver Operator Characteristic Plug-In PACKAGE
2015-02-26	SurvCorr	Correlation of Bivariate Survival Times
2015-02-25	aroma.apd	A Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
2015-02-25	FGSG	Feature Grouping and Selection Over an Undirected Graph
2015-02-25	ihs	Inverse Hyperbolic Sine Distribution
2015-02-25	multiPIM	Variable Importance Analysis with Population Intervention Models
2015-02-25	SDD	Serial Dependence Diagrams
2015-02-24	assist	A Suite of R Functions Implementing Spline Smoothing Techniques
2015-02-24	autopls	Partial Least Squares Regression with Backward Selection of Predictors
2015-02-24	babar	Bayesian Bacterial Growth Curve Analysis in R
2015-02-24	coloredICA	Implementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis
2015-02-24	coxsei	Fitting a CoxSEI Model
2015-02-24	FFD	Freedom from Disease
2015-02-24	likelihood	Methods for Maximum Likelihood Estimation
2015-02-24	mwa	Causal Inference in Spatiotemporal Event Data
2015-02-24	phenability	Nonparametric Stability Analysis
2015-02-24	SvyNom	Nomograms for Right-Censored Outcomes from Survey Designs
2015-02-23	crrstep	Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
2015-02-23	games	Statistical Estimation of Game-Theoretic Models
2015-02-23	stocks	Fast Functions for Stock Market Analysis
2015-02-23	SurvLong	Analysis of Proportional Hazards Model with Sparse Longitudinal Covariates
2015-02-23	wahc	Autocorrelation and Heteroskedasticity Correction in Fixed Effect Panel Data Model
2015-02-23	wmlf	Wavelet Leaders in Multifractal Analysis
2015-02-22	highTtest	Simultaneous Critical Values for t-Tests in Very High Dimensions
2015-02-22	protoclust	Hierarchical Clustering with Prototypes
2015-02-22	R.huge	Methods for Accessing Huge Amounts of Data [deprecated]
2015-02-22	ssize.fdr	Sample Size Calculations for Microarray Experiments
2015-02-21	frm	Regression Analysis of Fractional Responses
2015-02-21	lmeNBBayes	Compute the Personalized Activity Index Based on a Flexible Bayesian Negative Binomial Model
2015-02-20	faisalconjoint	Faisal Conjoint Model: A New Approach to Conjoint Analysis
2015-02-20	fastpseudo	Fast Pseudo Observations
2015-02-20	msda	Multi-Class Sparse Discriminant Analysis
2015-02-20	UBCRM	Functions to Simulate and Conduct Dose-Escalation Phase I Studies
2015-02-19	fgpt	Floating Grid Permutation Technique
2015-02-19	Simile	Interact with Simile Models
2015-02-18	clusterGeneration	Random Cluster Generation (with Specified Degree of Separation)
2015-02-18	lbfgsb3	Limited Memory BFGS Minimizer with Bounds on Parameters
2015-02-18	MortalitySmooth	Smoothing and Forecasting Poisson Counts with P-Splines
2015-02-18	rjade	A Clean, Whitespace-Sensitive Template Language for Writing HTML
2015-02-18	semsfa	Semiparametric Estimation of Stochastic Frontier Models
2015-02-17	analyz	Model Layer for Automatic Data Analysis via CSV File Interpretation
2015-02-17	ATE	Inference for Average Treatment Effects using Covariate Balancing
2015-02-17	eegkit	Toolkit for Electroencephalography Data
2015-02-17	GaDiFPT	First Passage Time Simulation for Gaussian Diffusion Processes
2015-02-17	hpcwld	High Performance Cluster Models Based on Kiefer-Wolfowitz Recursion
2015-02-17	IBDhaploRtools	Functions for the Analysis of IBD Haplo Output
2015-02-17	IBDLabels	Convert Between Different IBD-State Labelling Schemes
2015-02-17	palaeoSig	Significance Tests for Palaeoenvironmental Reconstructions
2015-02-16	bde	Bounded Density Estimation
2015-02-16	glba	General Linear Ballistic Accumulator Models
2015-02-16	LPS	Linear Predictor Score, for Binary Inference from Multiple Continuous Variables
2015-02-16	PCIT	Partial Correlation Coefficient with Information Theory
2015-02-16	randomUniformForest	Random Uniform Forests for Classification, Regression and Unsupervised Learning
2015-02-16	sybilEFBA	Using Gene Expression Data to Improve Flux Balance Analysis Predictions
2015-02-16	wbs	Wild Binary Segmentation for Multiple Change-Point Detection
2015-02-15	nFCA	Numerical Formal Concept Analysis for Systematic Clustering
2015-02-15	sparseBC	Sparse Biclustering of Transposable Data
2015-02-15	ztable	Zebra-Striped Tables in LaTeX and HTML Formats
2015-02-14	BayesBridge	Bridge Regression
2015-02-14	minimist	Parse Argument Options
2015-02-14	moonBook	Functions and Datasets for the Book by Keon-Woong Moon
2015-02-14	phytotools	Phytoplankton Production Tools
2015-02-13	demi	Differential Expression from Multiple Indicators
2015-02-13	plotGoogleMaps	Plot Spatial or Spatio-Temporal Data Over Google Maps
2015-02-13	ROAuth	R Interface For OAuth
2015-02-13	shinyTree	jsTree Bindings for Shiny
2015-02-13	tbart	Teitz and Bart's p-Median Algorithm
2015-02-12	FastKNN	Fast k-Nearest Neighbors
2015-02-12	gaselect	Genetic Algorithm (GA) for Variable Selection from High-Dimensional Data
2015-02-12	kselection	Selection of K in K-Means Clustering
2015-02-12	MTS	All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models
2015-02-11	ARPobservation	Tools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes
2015-02-11	condMVNorm	Conditional Multivariate Normal Distribution
2015-02-11	rNMF	Robust Nonnegative Matrix Factorization
2015-02-11	shinybootstrap2	Bootstrap 2 Web Components for Use with Shiny
2015-02-11	tmg	Truncated Multivariate Gaussian Sampling
2015-02-11	treelet	An Adaptive Multi-Scale Basis for High-Dimensional, Sparse and Unordered Data
2015-02-10	cccp	Cone Constrained Convex Problems
2015-02-10	ICAFF	Imperialist Competitive Algorithm
2015-02-10	lmm	Linear Mixed Models
2015-02-10	RInSp	R Individual Specialization (RInSp)
2015-02-10	SoftClustering	Soft Clustering Algorithms
2015-02-09	ivpanel	Instrumental Panel Data Models
2015-02-08	cec2005benchmark	Benchmark for the CEC 2005 Special Session on Real-Parameter Optimization
2015-02-08	MetNorm	Statistical Methods for Normalizing Metabolomics Data
2015-02-08	SVMMatch	Causal Effect Estimation and Diagnostics with Support Vector Machines
2015-02-07	klausuR	Multiple Choice Test Evaluation
2015-02-06	knncat	Nearest-neighbor Classification with Categorical Variables
2015-02-06	micromap	Linked Micromap Plots
2015-02-06	SimilarityMeasures	Trajectory Similarity Measures
2015-02-06	TableMonster	Table Monster
2015-02-05	BayesMed	Default Bayesian Hypothesis Tests for Correlation, Partial Correlation, and Mediation
2015-02-05	emplik2	Empirical Likelihood Ratio Test for Two Samples with Censored Data
2015-02-05	fdatest	Interval Testing Procedure for Functional Data
2015-02-05	svKomodo	SciViews GUI API - Functions to interface with Komodo Edit/IDE
2015-02-04	BLCOP	Black-Litterman and Copula Opinion Pooling Frameworks
2015-02-03	poisDoubleSamp	Confidence Intervals with Poisson Double Sampling
2015-02-03	RPPairwiseDesign	Resolvable partially pairwise balanced design and Space-filling design via association scheme
2015-02-02	lmeNB	Compute the Personalized Activity Index Based on a Negative Binomial Model
2015-02-02	multicon	Multivariate Constructs
2015-02-02	royston	Royston's H Test: Multivariate Normality Test
2015-02-02	SETPath	Spiked Eigenvalue Test for Pathway data
2015-02-01	CompRandFld	Composite-Likelihood Based Analysis of Random Fields
2015-02-01	hbm	Hierarchical Block Matrix Analysis
2015-01-31	d3Network	Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R
2015-01-31	infra	An Infrastructure Proxy Function
2015-01-31	LMERConvenienceFunctions	Model Selection and Post-hoc Analysis for (G)LMER Models
2015-01-31	multiAssetOptions	Finite Difference Method for Multi-Asset Option Valuation
2015-01-30	kissmig	a Keep It Simple Species Migration Model
2015-01-30	ppmlasso	Point Process Models with LASSO Penalties
2015-01-29	mousetrack	Mouse-Tracking Measures from Trajectory Data
2015-01-29	portfolio	Analysing equity portfolios
2015-01-29	roughrf	Roughened Random Forests for Binary Classification
2015-01-28	compareC	Compare Two Correlated C Indices with Right-censored Survival Outcome
2015-01-28	flower	Tools for characterizing flowering traits
2015-01-28	KFKSDS	Kalman Filter, Smoother and Disturbance Smoother
2015-01-28	metaMA	Meta-analysis for MicroArrays
2015-01-28	SLHD	Maximin-Distance (Sliced) Latin Hypercube Designs
2015-01-28	SMNCensReg	Fitting Univariate Censored Regression Model Under the Family of Scale Mixture of Normal Distributions
2015-01-27	geoCount	Analysis and Modeling for Geostatistical Count Data
2015-01-27	MaxPro	Maximum Projection Designs
2015-01-27	mvnpermute	Generate New Multivariate Normal Samples from Permutations
2015-01-27	RcmdrPlugin.SCDA	Rcmdr Plugin for Designing and Analyzing Single-case Experiments
2015-01-27	tufterhandout	Tufte-style html document format for rmarkdown
2015-01-26	Disake	Discrete associated kernel estimators
2015-01-26	metaRNASeq	Meta-analysis of RNA-seq data
2015-01-26	sae2	Small Area Estimation: Time-series Models
2015-01-24	CensRegMod	Fits Normal and Student-t Censored Regression Model
2015-01-23	grplasso	Fitting user specified models with Group Lasso penalty
2015-01-23	pbivnorm	Vectorized Bivariate Normal CDF
2015-01-23	remMap	Regularized Multivariate Regression for Identifying Master Predictors
2015-01-22	cec2013	Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013
2015-01-22	ESEA	ESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis
2015-01-22	sig	Print Function Signatures
2015-01-22	timeordered	Time-ordered and time-aggregated network analyses
2015-01-22	wesanderson	A Wes Anderson Palette Generator
2015-01-21	ArfimaMLM	Arfima-MLM Estimation For Repeated Cross-Sectional Data
2015-01-21	D2C	Predicting Causal Direction from Dependency Features
2015-01-21	drmdel	Dual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples
2015-01-21	gammSlice	Generalized additive mixed model analysis via slice sampling
2015-01-21	ggm	Functions for graphical Markov models
2015-01-21	MenuCollection	Collection of Configurable GTK+ Menus
2015-01-20	snpRF	Random Forest for SNPs to Prevent X-chromosome SNP Importance Bias
2015-01-19	imputeLCMD	A collection of methods for left-censored missing data imputation
2015-01-17	HTMLUtils	Facilitates Automated HTML Report Creation
2015-01-16	anfis	Adaptive Neuro Fuzzy Inference System in R
2015-01-16	fwsim	Fisher-Wright Population Simulation
2015-01-16	OrdinalLogisticBiplot	Biplot representations of ordinal variables
2015-01-16	sphet	Estimation of spatial autoregressive models with and without heteroskedastic innovations
2015-01-15	cmm	Categorical Marginal Models
2015-01-15	MultiMeta	Meta-analysis of Multivariate Genome Wide Association Studies
2015-01-14	ASPBay	Bayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data
2015-01-14	HiDimMaxStable	Inference on High Dimensional Max-Stable Distributions
2015-01-14	mailR	A Utility to Send Emails from R
2015-01-14	mztwinreg	Regression Models for Monozygotic Twin Data
2015-01-14	prabclus	Functions for Clustering of Presence-Absence, Abundance and Multilocus Genetic Data
2015-01-14	robustDA	Robust Mixture Discriminant Analysis
2015-01-14	SPODT	Spatial Oblique Decision Tree
2015-01-14	WCE	Weighted Cumulative Exposure Models
2015-01-13	ads	Spatial point patterns analysis
2015-01-13	chromer	Interface to Chromosome Counts Database API
2015-01-13	dst	Using Dempster-Shafer Theory
2015-01-13	FACTscorer	Scores the FACT and FACIT Family of Patient-Reported Outcome Measures
2015-01-13	HierO	A graphical user interface for calculating power and sample size for hierarchical data
2015-01-13	hwwntest	Tests of White Noise using Wavelets
2015-01-13	MBmca	Nucleic Acid Melting Curve Analysis on Microbead Surfaces with R
2015-01-13	readMLData	Reading Machine Learning Benchmark Data Sets in Different Formats
2015-01-13	Sunder	Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2015-01-13	traj	Trajectory Analysis
2015-01-12	classyfire	Robust multivariate classification using highly optimised SVM ensembles
2015-01-12	CNOGpro	Copy Numbers of Genes in prokaryotes
2015-01-12	DEEPR	Dirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test
2015-01-12	HomoPolymer	Theoretical Model to Simulate Radical Polymerization
2015-01-12	penMSM	Estimating Regularized Multi-state Models Using L1 Penalties
2015-01-11	leiv	Bivariate Linear Errors-In-Variables Estimation
2015-01-11	neldermead	R port of the Scilab neldermead module
2015-01-10	aoristic	aoristic analysis with spatial output (kml)
2015-01-10	neuRosim	Functions to Generate fMRI Data Including Activated Data, Noise Data and Resting State Data
2015-01-10	waveslim	Basic wavelet routines for one-, two- and three-dimensional signal processing
2015-01-09	LSD	Lots of Superior Depictions
2015-01-09	randomizationInference	Flexible Randomization-Based Inference
2015-01-09	textometry	Textual Data Analysis Package used by the TXM Software
2015-01-08	interferenceCI	Exact Confidence Intervals in the Presence of Interference
2015-01-08	noia	Implementation of the Natural and Orthogonal InterAction (NOIA) model
2015-01-08	sra	Selection Response Analysis
2015-01-07	BEQI2	Benthic Ecosystem Quality Index 2
2015-01-07	cudaBayesreg	CUDA Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis
2015-01-07	eaf	Plots of the Empirical Attainment Function
2015-01-07	FastPCS	FastPCS Robust Fit of Multivariate Location and Scatter
2015-01-07	gdimap	Generalized Diffusion Magnetic Resonance Imaging
2015-01-07	glpkAPI	R Interface to C API of GLPK
2015-01-07	tsc	Likelihood-ratio Tests for Two-Sample Comparisons
2015-01-06	physiology	Calculate Physiological Characteristics of Adults and Children
2015-01-05	CorrBin	Nonparametrics with Clustered Binary and Multinomial Data
2015-01-05	DistributionUtils	Distribution Utilities
2015-01-05	GeneralizedHyperbolic	The Generalized Hyperbolic Distribution
2015-01-05	moments	Moments, cumulants, skewness, kurtosis and related tests
2015-01-05	mritc	MRI Tissue Classification
2015-01-05	NormalLaplace	The Normal Laplace Distribution
2015-01-05	RadTran	Radon and Soil Gas Transport in 2D Porous Medium
2015-01-05	SCEPtER	Stellar CharactEristics Pisa Estimation gRid
2015-01-05	SkewHyperbolic	The Skew Hyperbolic Student t-Distribution
2015-01-05	VarianceGamma	The Variance Gamma Distribution
2015-01-04	EntropyEstimation	Estimation of Entropy and Related Quantities
2015-01-04	intReg	Interval Regression
2015-01-04	jiebaRD	Chinese Text Segmentation Data for jiebaR Package
2015-01-02	dropR	Analyze Drop Out of an Experiment or Survey
2015-01-02	ForImp	Imputation of Missing Values Through a Forward Imputation Algorithm
2015-01-02	TreePar	Estimating birth and death rates based on phylogenies
2015-01-01	glrt	Generalized Logrank Tests for Interval-censored Failure Time Data
2015-01-01	Storm	Write Storm Bolts in R using the Storm Multi-Language Protocol
2014-12-31	CNprep	Pre-process DNA Copy Number (CN) Data for Detection of CN Events
2014-12-31	YaleToolkit	Data exploration tools from Yale University
2014-12-30	BCDating	Business Cycle Dating and Plotting Tools
2014-12-30	CORE	Cores of Recurrent Events
2014-12-30	ParDNAcopy	Parallel implementation of the "segment" function of package "DNAcopy"
2014-12-29	diffEq	Functions from the book Solving Differential Equations in R
2014-12-29	dupiR	Bayesian inference from count data using discrete uniform priors
2014-12-29	ecolMod	"A practical guide to ecological modelling - using R as a simulation platform"
2014-12-29	metabolomics	Analysis of Metabolomics Data
2014-12-29	raters	A Modification of Fleiss' Kappa in Case of Nominal and Ordinal Variables
2014-12-29	TBEST	Tree Branches Evaluated Statistically for Tightness
2014-12-28	BNDataGenerator	Data Generator based on Bayesian Network Model
2014-12-28	lm.beta	Add Standardized Regression Coefficients to lm-Objects
2014-12-28	rmngb	Miscellaneous Collection of Functions for Medical Data Analysis
2014-12-27	extraTrees	Extremely Randomized Trees (ExtraTrees) Method for Classification and Regression
2014-12-26	LIM	Linear Inverse Model examples and solution methods
2014-12-26	NetIndices	Estimating network indices, including trophic structure of foodwebs in R
2014-12-26	RConics	Computations on Conics
2014-12-24	additivityTests	Additivity Tests in the Two Way Anova with Single Sub-class Numbers
2014-12-24	BayClone2	Bayesian Feature Allocation Model for Tumor Heterogeneity
2014-12-24	historydata	Data Sets for Historians
2014-12-24	manipulate	Interactive Plots for RStudio
2014-12-24	OutlierDM	Outlier Detection for Multi-replicated High-throughput Data
2014-12-24	OutrankingTools	Functions for Solving Multiple-criteria Decision-making Problems
2014-12-23	KrigInv	Kriging-based Inversion for Deterministic and Noisy Computer Experiments
2014-12-22	MAd	Meta-Analysis with Mean Differences
2014-12-22	MPDiR	Data sets and scripts for Modeling Psychophysical Data in R
2014-12-21	PredictABEL	Assessment of Risk Prediction Models
2014-12-21	qmrparser	Parser combinator in R
2014-12-21	reports	Assist the Workflow of Writing Academic Articles and Other Reports
2014-12-20	NORTARA	Generation of Multivariate Data with Arbitrary Marginals
2014-12-20	orgR	Analyse Text Files Created by Emacs' Org mode
2014-12-20	SCEPtERbinary	Stellar CharactEristics Pisa Estimation gRid for Binary Systems
2014-12-20	svDialogs	SciViews GUI API - Dialog boxes
2014-12-20	tcltk2	Tcl/Tk Additions
2014-12-19	geonames	Interface to www.geonames.org web service
2014-12-19	RJDBC	Provides access to databases through the JDBC interface
2014-12-19	sBF	Smooth Backfitting
2014-12-18	DCGL	Differential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data
2014-12-18	GPC	Generalized Polynomial Chaos
2014-12-18	multiband	Period Estimation for Multiple Bands
2014-12-18	RnavGraph	Using Graphs as a Navigational Infrastructure
2014-12-18	RoughSetKnowledgeReduction	Simplification of Decision Tables using Rough Sets
2014-12-18	selfingTree	Genotype Probabilities in Intermediate Generations of Inbreeding Through Selfing
2014-12-18	sprinter	Framework for Screening Prognostic Interactions
2014-12-17	amap	Another Multidimensional Analysis Package
2014-12-17	hexView	Viewing Binary Files
2014-12-17	nullabor	Tools for Graphical Inference
2014-12-17	plsRbeta	Partial Least Squares Regression for Beta Regression Models
2014-12-17	plsRcox	Partial Least Squares Regression for Cox Models and Related Techniques
2014-12-17	plsRglm	Partial Least Squares Regression for Generalized Linear Models
2014-12-17	RcppDL	Deep Learning Methods via Rcpp
2014-12-17	rSFA	Slow Feature Analysis in R
2014-12-17	soil.spec	Soil Spectroscopy Tools and Reference Models
2014-12-16	leaderCluster	Leader Clustering Algorithm
2014-12-16	season	Seasonal analysis of health data
2014-12-16	WaveletComp	Computational Wavelet Analysis
2014-12-15	wildlifeDI	Calculate Indices of Dynamic Interaction for Wildlife Telemetry Data
2014-12-13	Rmosek	The R-to-MOSEK Optimization Interface
2014-12-13	Vdgraph	Variance dispersion graphs and Fraction of design space plots for response surface designs
2014-12-12	DSpat	Spatial Modelling for Distance Sampling Data
2014-12-11	c060	Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models
2014-12-10	bnormnlr	Bayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models
2014-12-10	DnE	Distribution and Equation
2014-12-10	gsalib	Utility Functions For GATK
2014-12-09	cvAUC	Cross-Validated Area Under the ROC Curve Confidence Intervals
2014-12-09	etm	Empirical Transition Matrix
2014-12-09	isopam	Isopam (Clustering)
2014-12-09	MRSP	Multinomial Response Models with Structured Penalties
2014-12-09	normalp	Routines for Exponential Power Distribution
2014-12-09	RDataCanvas	Basic Runtime Support for Datacanvas.io
2014-12-08	bdynsys	Bayesian Dynamical System Model
2014-12-08	breakage	SICM pipette tip geometry estimation
2014-12-08	ccda	Combined Cluster and Discriminant Analysis
2014-12-08	extrafont	Tools for using fonts
2014-12-08	MetSizeR	GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
2014-12-08	rbounds	Perform Rosenbaum bounds sensitivity tests for matched and unmatched data
2014-12-08	rJPSGCS	R-interface to Gene Drop Simulation from JPSGCS
2014-12-07	BayesianAnimalTracker	Bayesian Melding of GPS and DR Path for Animal Tracking
2014-12-07	dashboard	Interactive Data Visualization with D3.js
2014-12-07	RColorBrewer	ColorBrewer Palettes
2014-12-06	algstat	Algebraic statistics in R
2014-12-06	Rcgmin	Conjugate Gradient Minimization of Nonlinear Functions
2014-12-05	ars	Adaptive Rejection Sampling
2014-12-05	BLR	Bayesian Linear Regression
2014-12-05	gettingtothebottom	Learning Optimization and Machine Learning for Statistics
2014-12-05	okmesonet	Retrieve Oklahoma Mesonet climatological data
2014-12-05	popReconstruct	Reconstruct Human Populations of the Recent Past
2014-12-05	robfilter	Robust Time Series Filters
2014-12-04	BEDASSLE	Quantifies effects of geo/eco distance on genetic differentiation
2014-12-04	extWeibQuant	Estimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture
2014-12-04	HSSVD	Biclustering with Heterogeneous Variance
2014-12-04	LeafAngle	Analysis and Visualization of Plant Leaf Angle Distributions
2014-12-04	NPS	Convenience Functions and Tests for Working With the Net Promoter Score (NPS)
2014-12-04	sensitivityPStrat	Principal Stratification Sensitivity Analysis Functions
2014-12-03	genMOSS	Functions for the Bayesian Analysis of GWAS Data
2014-12-03	rngSetSeed	Seeding the Default RNG with a Numeric Vector
2014-12-03	sequences	Generic and Biological Sequences
2014-12-02	FLIM	Farewell’s Linear Increments Model
2014-12-02	gamboostMSM	Estimating multistate models using gamboost()
2014-12-02	MOrder	Check Time Homogeneity and Markov Chain Order
2014-12-02	plgp	Particle Learning of Gaussian Processes
2014-12-02	radar	Fundamental Formulas for Radar
2014-12-02	turfR	TURF Analysis for R
2014-12-02	VAR.etp	VAR modelling: estimation, testing, and prediction
2014-12-01	kriging	Ordinary Kriging
2014-12-01	MindOnStats	Data sets included in Utts and Heckard's Mind on Statistics
2014-12-01	occ	Estimates PET neuroreceptor occupancies
2014-12-01	ssd	Sample Size Determination (SSD) for Unordered Categorical Data
2014-11-30	rngwell19937	Random number generator WELL19937a with 53 or 32 bit output
2014-11-29	mco	Multiple Criteria Optimization Algorithms and Related Functions
2014-11-29	rainfreq	Rainfall Frequency (Design Storm) Estimates from the US National Weather Service
2014-11-29	revealedPrefs	Revealed Preferences and Microeconomic Rationality
2014-11-29	simrel	Linear Model Data Simulation and Design of Computer Experiments
2014-11-27	CINOEDV	Co-Information based N-Order Epistasis Detector and Visualizer
2014-11-27	DECIDE	DEComposition of Indirect and Direct Effects
2014-11-27	miRtest	combined miRNA- and mRNA-testing
2014-11-27	orderedLasso	Ordered Lasso and Time-lag Sparse Regression
2014-11-27	SSrat	Two-dimensional sociometric status determination with rating scales
2014-11-27	superbiclust	Generating Robust Biclusters from a Bicluster Set (Ensemble Biclustering)
2014-11-26	EstSimPDMP	Estimation and Simulation for PDMPs
2014-11-26	hierarchicalDS	Functions For Performing Hierarchical Analysis of Distance Sampling Data
2014-11-26	kpodclustr	Method for Clustering Partially Observed Data
2014-11-26	moduleColor	Basic Module Functions
2014-11-26	SunterSampling	Sunter's sampling design
2014-11-25	acss	Algorithmic Complexity for Short Strings
2014-11-25	GPArotation	GPA Factor Rotation
2014-11-25	gsarima	Two functions for Generalized SARIMA time series simulation
2014-11-25	Julia	Fractal Image Data Generator
2014-11-25	maboost	Binary and Multiclass Boosting Algorithms
2014-11-25	musicNMR	Conversion of Nuclear Magnetic Resonance spectrum in audio file
2014-11-25	setRNG	Set (Normal) Random Number Generator and Seed
2014-11-25	SMR	Externally Studentized Midrange Distribution
2014-11-25	soma	General-Purpose Optimisation With the Self-Organising Migrating Algorithm
2014-11-24	choiceDes	Design Functions for Choice Studies
2014-11-24	choplump	Choplump tests
2014-11-24	rdatamarket	Data access API for DataMarket.com
2014-11-24	sgr	Sample Generation by Replacement
2014-11-24	someKfwer	Controlling the Generalized Familywise Error Rate
2014-11-23	EloRating	Animal Dominance Hierarchies by Elo Rating
2014-11-22	magrittr	A Forward-Pipe Operator for R
2014-11-22	proteomics	Statistical Analysis of High Throughput Proteomics Data
2014-11-22	sisus	SISUS: Stable Isotope Sourcing using Sampling
2014-11-20	BACprior	Choice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm
2014-11-20	bglm	Bayesian Estimation in Generalized Linear Models
2014-11-20	crmn	CCMN and other noRMalizatioN methods for metabolomics data
2014-11-20	deltaPlotR	Identification of dichotomous differential item functioning (DIF) using Angoff's Delta Plot method
2014-11-20	gset	Group Sequential Design in Equivalence Studies
2014-11-20	ilc	Lee-Carter Mortality Models using Iterative Fitting Algorithms
2014-11-20	RAPIDR	Reliable Accurate Prenatal non-Invasive Diagnosis R package
2014-11-20	x12GUI	X12 - Graphical User Interface
2014-11-19	QuACN	QuACN: Quantitative Analysis of Complex Networks
2014-11-19	SEAsic	Score Equity Assessment- summary index computation
2014-11-19	sqlutils	Utilities for working with SQL files
2014-11-18	attribrisk	Population Attributable Risk
2014-11-18	boolean3	Boolean Binary Response Models
2014-11-18	spatialTailDep	Estimation of spatial tail dependence models
2014-11-17	randtests	Testing randomness in R
2014-11-17	spThin	Functions for Spatial Thinning of Species Occurrence Records for Use in Ecological Models
2014-11-15	vowels	Vowel Manipulation, Normalization, and Plotting
2014-11-14	entropy	Estimation of Entropy, Mutual Information and Related Quantities
2014-11-14	ttScreening	Genome-wide DNA methylation sites screening by use of training and testing samples
2014-11-13	aftgee	Accelerated Failure Time Model with Generalized Estimating Equations
2014-11-13	optimx	A Replacement and Extension of the optim() Function
2014-11-13	toxtestD	Experimental design for binary toxicity tests
2014-11-11	catdata	Categorical Data
2014-11-11	glogis	Fitting and Testing Generalized Logistic Distributions
2014-11-11	lymphclon	Accurate Estimation of Clonal Coincidences and Abundances from Biological Replicates
2014-11-10	episplineDensity	Density Estimation with Soft Information by Exponential Epi-splines
2014-11-10	ionflows	Calculate the Number of Required Flows for Semiconductor Sequencing
2014-11-10	ips	Interfaces to Phylogenetic Software in R
2014-11-10	ISBF	Iterative Selection of Blocks of Features - ISBF
2014-11-10	ModelGood	Validation of risk prediction models
2014-11-10	PHYLOGR	Functions for Phylogenetically Based Statistical Analyses
2014-11-10	Rcpp11	R and C++11
2014-11-10	Rothermel	Rothermel fire spread model for R
2014-11-09	riskSimul	Risk Quantification for Stock Portfolios under the T-Copula Model
2014-11-08	LinCal	Static Univariate Frequentist and Bayesian Linear Calibration
2014-11-08	OptionPricing	Option Pricing with Efficient Simulation Algorithms
2014-11-07	BB	Solving and Optimizing Large-Scale Nonlinear Systems
2014-11-07	BTYD	Implementing Buy 'Til You Die Models
2014-11-07	npsm	Package for Nonparametric Statistical Methods using R
2014-11-06	PLSbiplot1	The Partial Least Squares (PLS) Biplot
2014-11-05	hcp	Change Point Estimation for Regression with Heteroscedastic Data
2014-11-05	MAT	Multidimensional Adaptive Testing
2014-11-05	MGL	Module Graphical Lasso
2014-11-05	strap	Stratigraphic Tree Analysis for Palaeontology
2014-11-05	TRSbook	Functions and Datasets to Accompany the Book "The R Software: Fundamentals of Programming and Statistical Analysis"
2014-11-03	CombinePValue	Combine a Vector of Correlated p-values
2014-11-03	rjson	JSON for R
2014-11-03	ScoreGGUM	Score Persons Using the Generalized Graded Unfolding Model
2014-11-03	sdcTarget	Statistical Disclosure Control Substitution Matrix Calculator
2014-11-02	bcpa	Behavioral change point analysis of animal movement
2014-11-02	OptimalCutpoints	Computing optimal cutpoints in diagnostic tests
2014-11-01	kaps	K-Adaptive Partitioning for Survival data
2014-11-01	RMTstat	Distributions, Statistics and Tests derived from Random Matrix Theory
2014-11-01	smac	Sparse Multi-category Angle-Based Large-Margin Classifiers
2014-10-31	PrivateLR	Differentially Private Regularized Logistic Regression
2014-10-31	tuple	Find every match, or orphan, duplicate, triplicate, or other replicated values
2014-10-30	mapplots	Data Visualisation on Maps
2014-10-29	isdals	Provides datasets for Introduction to Statistical Data Analysis for the Life Sciences
2014-10-29	ldr	Methods for likelihood-based dimension reduction in regression
2014-10-28	CateSelection	Categorical Variable Selection Methods
2014-10-28	lassoscore	High-Dimensional Inference with the Penalized Score Test
2014-10-28	safi	Sensitivity Analysis for Functional Input
2014-10-27	qdm	Fitting a Quadrilateral Dissimilarity Model to Same-Different Judgments
2014-10-27	ropensecretsapi	R Package for the OpenSecrets.org API
2014-10-25	DBKGrad	Discrete Beta Kernel Graduation of Mortality Data
2014-10-25	highD2pop	Two-Sample Tests for Equality of Means in High Dimension
2014-10-25	ivpack	Instrumental Variable Estimation
2014-10-25	simTool	Conduct Simulation Studies with a Minimal Amount of Source Code
2014-10-23	matR	Metagenomics Analysis Tools for R
2014-10-23	splitstackshape	Stack and Reshape Datasets After Splitting Concatenated Values
2014-10-22	FDGcopulas	Multivariate Dependence with FDG Copulas
2014-10-22	JMdesign	Joint Modeling of Longitudinal and Survival Data - Power Calculation
2014-10-22	sigloc	Signal Location Estimation
2014-10-22	stepp	Subpopulation Treatment Effect Pattern Plot (STEPP)
2014-10-21	cdcsis	Conditional Distance Correlation and Its Related Feature Screening Method
2014-10-20	icapca	Mixed ICA/PCA
2014-10-20	MDSGUI	A GUI for interactive MDS in R
2014-10-20	npmlreg	Nonparametric maximum likelihood estimation for random effect models
2014-10-20	Rook	Rook - a web server interface for R
2014-10-19	flare	Family of Lasso Regression
2014-10-19	multispatialCCM	Multispatial Convergent Cross Mapping
2014-10-18	landpred	Landmark Prediction of a Survival Outcome
2014-10-18	rareNMtests	Ecological and biogeographical null model tests for comparing rarefaction curves
2014-10-18	stochprofML	Stochastic Profiling using Maximum Likelihood Estimation
2014-10-17	gsg	Calculation of selection coefficients
2014-10-17	pBrackets	Plot Brackets
2014-10-17	RMKdiscrete	Sundry Discrete Probability Distributions
2014-10-16	Metatron	Meta-analysis for Classification Data and Correction to Imperfect Reference
2014-10-16	NPCirc	Nonparametric Circular Methods
2014-10-16	RcmdrPlugin.steepness	Steepness Rcmdr Plug-in
2014-10-16	StMoSim	Plots a QQ-Norm Plot with several Gaussian simulations
2014-10-16	windex	windex: Analysing convergent evolution using the Wheatsheaf index
2014-10-15	AlgDesign	Algorithmic Experimental Design
2014-10-15	nsgp	Non-Stationary Gaussian Process Regression
2014-10-15	vetools	Tools for Venezuelan Environmental Data
2014-10-14	dice	Calculate probabilities of various dice-rolling events
2014-10-13	datamart	Unified access to your data sources
2014-10-13	popRange	popRange: A spatially and temporally explicit forward genetic simulator
2014-10-13	QualInt	Test for Qualitative Interactions
2014-10-09	minqa	Derivative-free optimization algorithms by quadratic approximation
2014-10-09	mpcv	Multivariate Process Capability Vector
2014-10-08	Rdsm	Threads Environment for R
2014-10-07	CINID	Curculionidae INstar IDentification
2014-10-07	mnormpow	Multivariate Normal Distributions with Power Integrand
2014-10-07	PLordprob	Multivariate Ordered Probit Model via Pairwise Likelihood
2014-10-07	VecStatGraphs3D	Vector analysis using graphical and analytical methods in 3D
2014-10-06	GISTools	Some further GIS capabilities for R
2014-10-06	grofit	The package was developed to fit fit many growth curves obtained under different conditions
2014-10-06	lllcrc	Local Log-linear Models for Capture-Recapture
2014-10-06	mvprpb	Orthant Probability of the Multivariate Normal Distribution
2014-10-06	NB	Maximum Likelihood method in estimating effective population size from genetic data
2014-10-06	snipEM	Snipping methods for robust estimation and clustering
2014-10-05	catIrt	An R Package for Simulating IRT-Based Computerized Adaptive Tests
2014-10-04	SightabilityModel	Wildlife Sightability Modeling
2014-10-04	vec2dtransf	2D Cartesian Coordinate Transformation
2014-10-02	DDIwR	DDI with R
2014-10-02	mycor	Automatic Correlation and Regression Test in a Data Frame
2014-10-02	TED	Turbulence Time Series Event Detection and Classification
2014-10-01	exsic	Convenience Functions for Botanists to Create Specimens Indices
2014-10-01	SQDA	Sparse Quadratic Discriminant Analysis
2014-10-01	steepness	Testing Steepness of Dominance Hierarchies
2014-09-29	atmcmc	Automatically Tuned Markov Chain Monte Carlo
2014-09-29	GPFDA	Apply Gaussian Process in Functional data analysis
2014-09-29	httpRequest	Basic HTTP Request
2014-09-29	log4r	A simple logging system for R, based on log4j
2014-09-29	rFDSN	Get Seismic Data from the International Federation of Digital Seismograph Networks
2014-09-29	ScottKnott	The ScottKnott Clustering Algorithm
2014-09-28	neural	Neural Networks
2014-09-26	alr4	Data to accompany Applied Linear Regression 4rd edition
2014-09-26	aplpack	Another Plot PACKage: stem.leaf, bagplot, faces, spin3R, plotsummary, plothulls, and some slider functions
2014-09-26	GenWin	Spline Based Window Boundaries for Genomic Analyses
2014-09-26	Guerry	Maps, data and methods related to Guerry (1833) "Moral Statistics of France"
2014-09-26	iC10TrainingData	Training datasets for iC10 package
2014-09-26	jSonarR	jSonar Analytics Platform API for R
2014-09-25	ivprobit	Instrumental variables probit model
2014-09-25	SPREDA	Statistical Package for Reliability Data Analysis
2014-09-24	deming	Deming, Thiel-Sen and Passing-Bablock Regression
2014-09-23	pvsR	An R package to interact with the Project Vote Smart API for scientific research
2014-09-23	SemiPar	Semiparametic Regression
2014-09-22	documair	Automatic Documentation for R packages
2014-09-22	IBrokers	R API to Interactive Brokers Trader Workstation
2014-09-22	predictmeans	Calculate Predicted Means for Linear Models
2014-09-21	CGP	Composite Gaussian process models
2014-09-21	RcmdrPlugin.MA	Graphical User Interface for Conducting Meta-Analyses in R
2014-09-21	sendmailR	send email using R
2014-09-21	trotter	Pseudo-Vectors Containing All Permutations, Combinations and Subsets of Objects Taken from a Vector
2014-09-20	Density.T.HoldOut	Density.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation
2014-09-20	mitools	Tools for multiple imputation of missing data
2014-09-20	OrdLogReg	Ordinal Logic Regression
2014-09-19	allelematch	Identifying unique multilocus genotypes where genotyping error and missing data may be present
2014-09-19	beanplot	Visualization via Beanplots (like Boxplot/Stripchart/Violin Plot)
2014-09-19	comclim	Community climate statistics
2014-09-19	edgeRun	More Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data
2014-09-19	iki.dataclim	Consistency, Homogeneity and Summary Statistics of Climatological Data
2014-09-19	LogicForest	Logic Forest
2014-09-19	opentraj	Tools for Creating and Analysing Air Trajectory Data
2014-09-19	RidgeFusion	R Package for Ridge Fusion in Statistical Learning
2014-09-19	RMOA	Connect R with MOA for Massive Online Analysis
2014-09-19	spatialnbda	Performs spatial NBDA in a Bayesian context
2014-09-18	adaptDA	Adaptive Mixture Discriminant Analysis
2014-09-18	bbo	Biogeography-Based Optimization
2014-09-18	ivbma	Bayesian Instrumental Variable Estimation and Model Determination via Conditional Bayes Factors
2014-09-18	modTempEff	Modelling temperature effects using time series data
2014-09-17	qgtools	Tools for Quantitative Genetics Data Analyses
2014-09-17	RadioSonde	Tools for plotting skew-T diagrams and wind profiles
2014-09-17	RMOAjars	External jars required for package RMOA
2014-09-16	compute.es	Compute Effect Sizes
2014-09-16	dlm	Bayesian and Likelihood Analysis of Dynamic Linear Models
2014-09-16	m4fe	Models for Financial Economics
2014-09-16	PerformanceAnalytics	Econometric tools for performance and risk analysis
2014-09-16	polidata	Political Data Interface in R
2014-09-15	genlasso	Path algorithm for generalized lasso problems
2014-09-15	propOverlap	Feature (gene) selection based on the Proportional Overlapping Scores
2014-09-15	qpcR	Modelling and analysis of real-time PCR data
2014-09-14	agop	Aggregation Operators and Preordered Sets
2014-09-14	RcmdrPlugin.coin	Rcmdr Coin Plug-In
2014-09-14	RH2	DBI/RJDBC interface to h2 Database
2014-09-13	phyloland	Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework
2014-09-13	referenceIntervals	Reference Intervals
2014-09-12	Mobilize	Mobilize plots and functions
2014-09-12	nettools	A Network Comparison Framework
2014-09-12	PepPrep	Insilico peptide mutation, digestion and homologous comparison
2014-09-11	knnIndep	Independence tests and benchmarks
2014-09-11	lefse	Phylogenetic and Functional Analyses for Ecology
2014-09-11	RankResponse	Ranking Responses in a Single Response Question or a Multiple Response Question
2014-09-11	rChoiceDialogs	rChoiceDialogs collection
2014-09-11	rsubgroup	Subgroup Discovery and Analytics
2014-09-10	caTools	Tools: moving window statistics, GIF, Base64, ROC AUC, etc
2014-09-10	eegkitdata	Data for package eegkit
2014-09-10	ForwardSearch	Forward Search using asymptotic theory
2014-09-10	hwriter	HTML Writer - Outputs R objects in HTML format
2014-09-10	Ohmage	R Client for Ohmage 2 server
2014-09-10	RcmdrPlugin.IPSUR	An IPSUR Plugin for the R Commander
2014-09-10	saery	Small Area Estimation for Rao and Yu Model
2014-09-09	bpkde	Back-Projected Kernel Density Estimation
2014-09-09	CircE	Circumplex models Estimation
2014-09-09	globalOptTests	Objective functions for benchmarking the performance of global optimization algorithms
2014-09-08	astro	Astronomy Functions, Tools and Routines
2014-09-08	emulator	Bayesian emulation of computer programs
2014-09-08	funHDDC	Model-based clustering in group-specific functional subspaces
2014-09-08	ibd	INCOMPLETE BLOCK DESIGNS
2014-09-08	lunar	Lunar Phase & Distance, Seasons and Other Environmental Factors
2014-09-08	minque	An R Package for Linear Mixed Model Analyses
2014-09-07	bionetdata	Biological and chemical data networks
2014-09-07	PerfMeas	PerfMeas: Performance Measures for ranking and classification tasks
2014-09-06	pyramid	Functions to draw population pyramid
2014-09-05	GxM	Maximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models
2014-09-05	readbitmap	Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG)
2014-09-04	BCA	Business and Customer Analytics
2014-09-04	cooptrees	Cooperative aspects of optimal trees in weighted graphs
2014-09-04	CopulaRegression	Bivariate Copula Based Regression Models
2014-09-04	helloJavaWorld	Hello Java World
2014-09-04	idr	Irreproducible discovery rate
2014-09-04	insuranceData	A Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance
2014-09-04	MRCV	Methods for Analyzing Multiple Response Categorical Variables (MRCVs)
2014-09-04	parcor	Regularized estimation of partial correlation matrices
2014-09-04	plsdof	Degrees of Freedom and Statistical Inference for Partial Least Squares Regression
2014-09-04	ppls	Penalized Partial Least Squares
2014-09-04	pqantimalarials	web tool for estimating under-five deaths caused by poor-quality antimalarials in sub-Saharan Africa
2014-09-04	RcmdrPlugin.BCA	Rcmdr Plug-In for Business and Customer Analytics
2014-09-04	SDaA	Sampling: Design and Analysis
2014-09-04	sparseSEM	Sparse-aware Maximum Likelihood for Structural Equation Models
2014-09-03	coreTDT	TDT for compound heterozygous and recessive models
2014-09-03	logitchoice	Fitting l2-regularized logit choice models via generalized gradient descent
2014-09-03	upclass	Updated Classification Methods using Unlabeled Data
2014-09-02	ds	Descriptive Statistics
2014-09-02	exactmeta	Exact fixed effect meta analysis
2014-09-02	optrees	Optimal Trees in Weighted Graphs
2014-09-01	Rbitcoin	R & bitcoin integration
2014-09-01	traitr	An interface for creating GUIs modeled in part after traits UI module for python
2014-08-31	lbfgs	Limited-memory BFGS Optimization
2014-08-30	mcIRT	IRT models for multiple choice items (mcIRT)
2014-08-30	nsRFA	Non-supervised Regional Frequency Analysis
2014-08-29	BIOM.utils	Utilities for the BIOM (Biological Observation Matrix) Format
2014-08-29	Eplot	Plotting longitudinal series
2014-08-29	mme	Multinomial Mixed Effects Models
2014-08-29	raincpc	Obtain and Analyze Rainfall Data from the Climate Prediction Center
2014-08-29	Rcapture	Loglinear Models for Capture-Recapture Experiments
2014-08-29	turboEM	A Suite of Convergence Acceleration Schemes for EM, MM and other fixed-point algorithms
2014-08-28	bfast	Breaks For Additive Season and Trend (BFAST)
2014-08-28	BioStatR	Initiation Ã la Statistique avec R
2014-08-28	cgAUC	Calculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it
2014-08-28	gWidgets	gWidgets API for building toolkit-independent, interactive GUIs
2014-08-28	RcmdrPlugin.DoE	R Commander Plugin for (industrial) Design of Experiments
2014-08-27	blkergm	Fitting block ERGM given the block structure on social networks
2014-08-27	gsubfn	Utilities for strings and function arguments
2014-08-27	MultiSV	MultiSV: an R package for identification of structural variations in multiple populations based on whole genome resequencing
2014-08-27	pamr	Pam: prediction analysis for microarrays
2014-08-27	ptinpoly	Point-In-Polyhedron Test (2D and 3D)
2014-08-27	shopifyr	An R Interface to the Shopify API
2014-08-26	BTSPAS	Bayesian Time-Strat. Population Analysis
2014-08-26	cents	Censored time series
2014-08-26	KANT	Package to identify and sort genes overexpressed
2014-08-25	commandr	Command pattern in R
2014-08-25	CommonJavaJars	Useful libraries for building a Java based GUI under R
2014-08-25	granova	Graphical Analysis of Variance
2014-08-24	CosmoPhotoz	Photometric redshift estimation using generalized linear models
2014-08-24	mkde	2D and 3D movement-based kernel density estimates (MKDEs)
2014-08-24	sonicLength	Estimating Abundance of Clones from DNA fragmentation data
2014-08-23	AMOEBA	A Multidirectional Optimum Ecotope-Based Algorithm
2014-08-23	bigRR	Generalized Ridge Regression (with special advantage for p >> n cases)
2014-08-23	labeling	Axis Labeling
2014-08-23	mppa	Statistics for analysing multiple simultaneous point processes on the real line
2014-08-23	pauwels2014	Bayesian Experimental Design for Systems Biology
2014-08-23	survAccuracyMeasures	Estimate accuracy measures for risk prediction markers from survival data
2014-08-22	scaRabee	Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models
2014-08-22	wpp2012	World Population Prospects 2012
2014-08-22	xlsxjars	Package required POI jars for the xlsx package
2014-08-21	SocialNetworks	Generates social networks based on distance
2014-08-21	TableToLongForm	TableToLongForm
2014-08-20	matpow	matrix powers
2014-08-19	extlasso	Maximum penalized likelihood estimation with extended lasso penalty
2014-08-19	FD	Measuring functional diversity (FD) from multiple traits, and other tools for functional ecology
2014-08-19	laeken	Estimation of indicators on social exclusion and poverty
2014-08-19	rite	The Right Editor to Write R
2014-08-18	BayesX	R Utilities Accompanying the Software Package BayesX
2014-08-18	bigmemory.sri	A shared resource interface for Bigmemory Project packages
2014-08-18	mvrtn	Mean and Variance of Truncated Normal Distribution
2014-08-17	classify	Classification Accuracy and Consistency under IRT models
2014-08-17	LPmerge	Merging linkage maps by linear programming
2014-08-16	RGoogleAnalytics	R Wrapper for the Google Analytics API
2014-08-16	snpar	Supplementary Non-parametric Statistics Methods
2014-08-15	CVTuningCov	Regularized Estimators of Covariance Matrices with CV Tuning
2014-08-15	gCat	Graph-based two-sample tests for categorical data
2014-08-15	phtt	Panel Data Analysis with Heterogeneous Time Trends
2014-08-15	pycno	Pycnophylactic Interpolation
2014-08-15	rtype	A strong type system for R
2014-08-14	AntWeb	programmatic interface to the AntWeb
2014-08-14	fastGHQuad	Fast Rcpp implementation of Gauss-Hermite quadrature
2014-08-14	hmmm	hierarchical multinomial marginal models
2014-08-14	RFLPtools	Tools to analyse RFLP data
2014-08-14	trimTrees	Trimmed opinion pools of trees in a random forest
2014-08-13	dicionariosIBGE	Dictionaries for reading microdata surveys from IBGE
2014-08-13	growthrate	Bayesian reconstruction of growth velocity
2014-08-13	LEAPFrOG	Likelihood Estimation of Admixture in Parents From Offspring Genotypes
2014-08-13	linkcomm	Tools for Generating, Visualizing, and Analysing Link Communities in Networks
2014-08-13	tvd	Total Variation Denoising
2014-08-12	astrodatR	Astronomical Data
2014-08-12	cAIC4	Conditional Akaike information criterion for lme4
2014-08-12	cramer	Multivariate nonparametric Cramer-Test for the two-sample-problem
2014-08-12	Xmisc	Xiaobei's miscellaneous classes and functions
2014-08-11	ibeemd	Irregular-lattice based ensemble empirical mode decomposition
2014-08-11	threeboost	Thresholded variable selection and prediction based on estimating equations
2014-08-10	hglasso	Learning graphical models with hubs
2014-08-10	RWebLogo	plotting custom sequence logos
2014-08-10	tiger	TIme series of Grouped ERrors
2014-08-10	UScancer	Create US cancer datasets from SEER, IARC, and US Census data
2014-08-10	vrtest	Variance Ratio tests and other tests for Martingale Difference Hypothesis
2014-08-09	astrolibR	Astronomy Users Library
2014-08-09	CHAT	Clonal Heterogeneity Analysis Tool
2014-08-09	ecipex	Efficient calculation of fine structure isotope patterns via Fourier transforms of simplex-based elemental models
2014-08-09	muhaz	Hazard Function Estimation in Survival Analysis
2014-08-09	SnowballC	Snowball stemmers based on the C libstemmer UTF-8 library
2014-08-08	itertools2	itertools2: Functions creating iterators for efficient looping
2014-08-08	SpatialPack	Package for analysis of spatial data
2014-08-06	klaR	Classification and visualization
2014-08-06	osDesign	Design and analysis of observational studies
2014-08-06	rje	Miscellaneous useful functions
2014-08-05	EMMIXuskew	Fitting Unrestricted Multivariate Skew t Mixture Models
2014-08-05	expp	Spatial analysis of extra-pair paternity
2014-08-05	SDMTools	Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises
2014-08-04	symmoments	Symbolic central and noncentral moments of the multivariate normal distribution
2014-08-03	interAdapt	interAdapt
2014-08-03	PottsUtils	Utility Functions of the Potts Models
2014-08-03	sanitizers	C/C++ source code to trigger Address and Undefined Behaviour Sanitizers
2014-08-02	MGRASTer	API Client for the MG-RAST Server of the US DOE KBase
2014-08-02	xlsx	Read, write, format Excel 2007 and Excel 97/2000/XP/2003 files
2014-08-01	ic.infer	Inequality constrained inference in linear normal situations
2014-08-01	LinearizedSVR	Linearized Support Vector Regression
2014-08-01	optiscale	Optimal scaling
2014-08-01	subgroup	Methods for exploring treatment effect heterogeneity in subgroup analysis of clinical trials
2014-07-31	agsemisc	Miscellaneous plotting and utility functions
2014-07-31	GeoDE	A geometrical Approach to Differential expression and gene-set enrichment
2014-07-30	ExceedanceTools	Confidence regions for exceedance sets and contour lines
2014-07-30	rareGE	Testing Gene-Environment Interaction for Rare Genetic Variants
2014-07-29	NeatMap	Non-clustered heatmap alternatives
2014-07-28	cosinor	Tools for estimating and predicting the cosinor model
2014-07-28	cvxclustr	Splitting methods for convex clustering
2014-07-28	LowRankQP	Low Rank Quadratic Programming
2014-07-28	RJSONIO	Serialize R objects to JSON, JavaScript Object Notation
2014-07-26	dcmr	Attribute profile estimation using Diagnostic Classification Models and MCMC
2014-07-26	infotheo	Information-Theoretic Measures
2014-07-26	stsm.class	Class and Methods for Structural Time Series Models
2014-07-25	AppliedPredictiveModeling	Functions and Data Sets for 'Applied Predictive Modeling'
2014-07-25	inTrees	Interpret Tree Ensembles
2014-07-25	nicheROVER	(Niche) (R)egion and Niche (Over)lap Metrics for Multidimensional Ecological Niches
2014-07-24	mtk	Mexico ToolKit library (MTK)
2014-07-24	sensitivitymw	Sensitivity analysis using weighted M-statistics
2014-07-24	spuRs	Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R"
2014-07-24	ssh.utils	Local and remote system commands with output and error capture
2014-07-23	hglm.data	Data for The hglm Package
2014-07-23	ReorderCluster	Reordering the dendrogram according to the class labels
2014-07-23	rnaseqWrapper	Wrapper for several R packages and scripts to automate RNA-seq analysis
2014-07-22	fueleconomy	EPA fuel economy data
2014-07-22	glasso	Graphical lasso- estimation of Gaussian graphical models
2014-07-22	leapp	latent effect adjustment after primary projection
2014-07-22	mewAvg	A Fixed Memeory Moving Expanding Window Average
2014-07-22	nasaweather	Collection of datasets from the ASA 2006 data expo
2014-07-22	nontargetData	Quantized simulation data of isotope pattern centroids
2014-07-22	RMRAINGEN	RMRAINGEN (R Multi-site RAINfall GENeretor): a package to generate daily time series of rainfall from monthly mean values
2014-07-22	SPACECAP	A Program to Estimate Animal Abundance and Density using Bayesian Spatially-Explicit Capture-Recapture Models
2014-07-21	GeoGenetix	Quantification of the effect of geographic versus environmental isolation on genetic differentiation
2014-07-21	ineq	Measuring Inequality, Concentration, and Poverty
2014-07-21	msme	Functions and Datasets for "Methods of Statistical Model Estimation"
2014-07-20	gWidgetstcltk	Toolkit implementation of gWidgets for tcltk package
2014-07-20	ProgGUIinR	support package for "Programming Graphical User Interfaces in R"
2014-07-20	SBRect	Detecting structural breaks using rectangle covering (non-parametric method)
2014-07-18	bezier	Bezier Curve and Spline Toolkit
2014-07-18	siRSM	Single-Index Response Surface Models
2014-07-17	mvcwt	Wavelet analysis of multiple time series
2014-07-17	nscancor	Non-Negative and Sparse CCA
2014-07-17	nsprcomp	Non-Negative and Sparse PCA
2014-07-16	functional	Curry, Compose, and other higher-order functions
2014-07-16	GCAI.bias	Guided Correction Approach for Inherited bias (GCAI.bias)
2014-07-16	hillmakeR	Perform occupancy analysis
2014-07-16	phaseR	Phase Plane Analysis of One and Two Dimensional Autonomous ODE Systems
2014-07-16	translate	Bindings for the Google Translate API v2
2014-07-15	ParallelForest	Random Forest Classification with Parallel Computing
2014-07-15	quad	Exact permutation moments of quadratic form statistics
2014-07-15	ROSE	ROSE: Random Over-Sampling Examples
2014-07-15	synchrony	Methods for computing spatial, temporal, and spatiotemporal statistics
2014-07-11	popKorn	For interval estimation of mean of selected populations
2014-07-11	refund.wave	Wavelet-Domain Regression with Functional Data
2014-07-10	CondReg	Condition Number Regularized Covariance Estimation
2014-07-10	COSINE	COndition SpecIfic sub-NEtwork
2014-07-10	metafolio	Metapopulation simulations for conserving salmon through portfolio optimization
2014-07-10	robustvarComp	Robust Estimation of Variance Component Models
2014-07-10	rysgran	Grain size analysis, textural classifications and distribution of unconsolidated sediments
2014-07-09	crossReg	Confidence intervals for crossover points of two simple regression lines
2014-07-09	translateR	Bindings for the Google and Microsoft Translation APIs
2014-07-08	EvoRAG	Evolutionary Rates Across Gradients
2014-07-08	RmixmodCombi	Combining Mixture Components for Clustering
2014-07-08	sievetest	Sieve test reporting functions
2014-07-06	rkvo	Read Key/Value Pair Observations
2014-07-05	eive	An algorithm for reducing errors-in-variable bias in simple linear regression
2014-07-05	ForIT	Functions from the 2nd Italian Forest Inventory (INFC)
2014-07-05	Thinknum	Thinknum Data Connection
2014-07-04	CompGLM	Conway-Maxwell-Poisson GLM and distribution functions
2014-07-04	SOD	SOD for multidimensional scaling
2014-07-03	Bayesianbetareg	Bayesian Beta regression: joint mean and precision modeling
2014-07-03	mcc	Moment Corrected Correlation
2014-07-03	qualCI	Causal Inference with Qualitative and Ordinal Information on Outcomes
2014-07-02	FunctionalNetworks	An algorithm for gene and gene set network inference
2014-07-02	hSDM	hierarchical Bayesian species distribution models
2014-07-02	LogConcDEAD	Log-concave Density Estimation in Arbitrary Dimensions
2014-07-02	MAVTgsa	Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest
2014-07-02	spatial.tools	R functions for working with spatial data
2014-07-01	scoring	Proper scoring rules
2014-07-01	subsemble	An Ensemble Method for Combining Subset-Specific Algorithm Fits
2014-07-01	sudoku	Sudoku Puzzle Generator and Solver
2014-06-30	CORM	The Clustering of Regression Models Method
2014-06-30	GenBinomApps	Clopper-Pearson Confidence Interval and Generalized Binomial Distribution
2014-06-30	stressr	Fetch and plot financial stress index and component data
2014-06-28	stosim	Stochastic Simulator for Reliability Modeling of Repairable Systems
2014-06-27	cond	Approximate conditional inference for logistic and loglinear models
2014-06-27	rforensicbatwing	BATWING for calculating forensic trace-suspect match probabilities
2014-06-26	ezsim	provide an easy to use framework to conduct simulation
2014-06-26	pedigreemm	Pedigree-based mixed-effects models
2014-06-26	RelValAnalysis	Relative Value Analysis
2014-06-26	sp23design	Design and Simulation of seamless Phase II-III Clinical Trials
2014-06-25	dagbag	Learning directed acyclic graphs (DAGs) through bootstrap aggregating
2014-06-25	nlsMicrobio	Nonlinear regression in predictive microbiology
2014-06-24	EasyStrata	Evaluation of stratified genome-wide association meta-analysis results
2014-06-24	FisHiCal	Iterative FISH-based Calibration of Hi-C Data
2014-06-24	LS2Wstat	A Multiscale Test of Spatial Stationarity for LS2W processes
2014-06-24	matlab	MATLAB emulation package
2014-06-24	RWBP	Detects spatial outliers using a Random Walk on Bipartite Graph
2014-06-24	rwt	Rice Wavelet Toolbox wrapper
2014-06-23	rClinicalCodes	R tools for integrating with the www.clinicalcodes.org repository
2014-06-22	pbdNCDF4	Programming with Big Data – Interface to Parallel Unidata NetCDF4 Format Data Files
2014-06-22	TaoTeProgramming	Illustrations from Tao Te Programming
2014-06-21	bcpmeta	Bayesian Multiple Changepoint Detection Using Metadata
2014-06-20	parallelMCMCcombine	Methods for combining independent subset Markov chain Monte Carlo (MCMC) posterior samples to estimate a posterior density given the full data set
2014-06-19	CommunityCorrelogram	Ecological Community Correlogram
2014-06-19	hazus	Damage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters
2014-06-18	localsolver	R API to LocalSolver
2014-06-17	clogitL1	Fitting exact conditional logistic regression with lasso and elastic net penalties
2014-06-17	cmprsk	Subdistribution Analysis of Competing Risks
2014-06-17	KernSmoothIRT	Nonparametric Item Response Theory
2014-06-17	tictoc	Functions for timing R scripts, as well as implementations of Stack and List structures
2014-06-16	arnie	"Arnie" box office records 1982-2014
2014-06-15	xhmmScripts	XHMM R scripts
2014-06-14	rbitcoinchartsapi	R Package for the BitCoinCharts.com API
2014-06-13	AssetPricing	Optimal pricing of assets with fixed expiry date
2014-06-13	DeducerText	Deducer GUI for Text Data
2014-06-13	ElstonStewart	Elston-Stewart Algorithm
2014-06-13	ESGtoolkit	Toolkit for the simulation of financial assets and interest rates models
2014-06-13	PCDSpline	Semiparametric regression analysis of panel count data using monotone splines
2014-06-13	wordcloud	Word Clouds
2014-06-12	flip	Multivariate Permutation Tests
2014-06-12	qVarSel	Variables Selection for Clustering and Classification
2014-06-12	ustyc	Fetch US Treasury yield curve data
2014-06-11	tm.plugin.alceste	Import texts from files in the Alceste format using the tm text mining framework
2014-06-11	tm.plugin.mail	Text Mining E-Mail Plug-In
2014-06-10	gsmoothr	Smoothing tools
2014-06-10	HiCseg	Detection of domains in HiC data
2014-06-10	ICsurv	A package for semiparametric regression analysis of interval-censored data
2014-06-10	ORCI	Several confidence intervals for the odds ratio
2014-06-09	IsoCI	Confidence intervals for current status data based on transformations and bootstrap
2014-06-08	synlik	Synthetic Likelihood methods for intractable likelihoods
2014-06-07	compositions	Compositional Data Analysis
2014-06-07	genasis	Global ENvironmental ASsessment Information System (GENASIS) computational tools
2014-06-07	Interact	Tests for marginal interactions in a 2 class response model
2014-06-07	kobe	Tools for the provision of scientific fisheries management advice
2014-06-06	memgene	Spatial pattern detection in genetic distance data using Moran's Eigenvector Maps
2014-06-05	AR1seg	Segmentation of an autoregressive Gaussian process of order 1
2014-06-05	vbsr	Variational Bayes Spike Regression Regularized Linear Models
2014-06-04	ChargeTransport	Charge Transfer Rates and Charge Carrier Mobilities
2014-06-04	rsdepth	Ray Shooting Depth (i.e. RS Depth) functions for bivariate analysis
2014-06-04	sas7bdat	SAS Database Reader (experimental)
2014-06-03	ebSNP	Genotyping and SNP calling using single-sample next generation sequencing data
2014-06-02	dissUtils	Utilities for making pairwise comparisons of multivariate data
2014-06-02	Mposterior	Mposterior: R package for Robust and Scalable Bayes via a Median of Subset Posterior Measures
2014-06-02	rHealthDataGov	Retrieve data sets from the HealthData.gov data API
2014-05-31	lasso2	L1 constrained estimation aka ‘lasso’
2014-05-31	pbo	Probability of Backtest Overfitting
2014-05-31	ripa	R Image Processing and Analysis
2014-05-30	interventionalDBN	Interventional Inference for Dynamic Bayesian Networks
2014-05-30	kdetrees	Nonparametric method for identifying discordant phylogenetic trees
2014-05-30	SensitivityCaseControl	Sensitivity Analysis for Case-Control Studies
2014-05-29	LearnBayes	Functions for Learning Bayesian Inference
2014-05-29	taRifx	Collection of utility and convenience functions
2014-05-28	ivlewbel	Uses heteroscedasticity to estimate mismeasured and endogenous regressor models
2014-05-28	ordBTL	Modelling comparison data with ordinal response
2014-05-28	seg	A set of tools for measuring spatial segregation
2014-05-27	bmmix	Bayesian multinomial mixture
2014-05-27	metagen	Inference in Meta Analysis and Meta Regression
2014-05-26	SRRS	The Stepwise Response Refinement Screener (SRRS)
2014-05-23	Modalclust	Hierarchical Modal Clustering
2014-05-23	rpart.utils	Tools for parsing and manipulating rpart objects, including generating machine readable rules
2014-05-23	tsbridge	Calculate normalising constants for Bayesian time series models
2014-05-23	ucbthesis	UC Berkeley graduate division thesis template
2014-05-22	BCE	Bayesian composition estimator: estimating sample (taxonomic) composition from biomarker data
2014-05-21	spatial.gev.bma	Hierarchical spatial generalized extreme value (GEV) modeling with Bayesian Model Averaging (BMA)
2014-05-19	hawkes	Hawkes process simulation and calibration toolkit
2014-05-18	cladoRcpp	C++ implementations of phylogenetic cladogenesis calculations
2014-05-18	cstar	Substantive significance testing for regression estimates and marginal effects
2014-05-18	Hankel	Univariate non-parametric two-sample test based on empirical Hankel transforms
2014-05-18	MC2toPath	Translates information from netcdf files with MC2 output into inter-PVT transitions
2014-05-17	boostr	A modular framework to bag or boost any estimation procedure
2014-05-16	dynia	Fit Dynamic Intervention Model
2014-05-16	FGN	Fractional Gaussian Noise and power law decay time series model fitting
2014-05-14	erpR	Event-related potentials (ERP) analysis, graphics and utility functions
2014-05-14	hydroApps	Tools and models for hydrological applications
2014-05-14	pkgmaker	Package development utilities
2014-05-14	rvHPDT	Calling haplotype-based and variant-based pedigree disequilibrium test for rare variants in pedigrees
2014-05-13	cutoffR	CUTOFF: A Spatio-temporal Imputation Method
2014-05-13	samplingEstimates	Sampling Estimates
2014-05-09	akmeans	Adaptive Kmeans algorithm based on threshold
2014-05-09	msap	Statistical analysis for Methylation-sensitive Amplification Polymorphism data
2014-05-08	iRepro	Reproducibility for Interval-Censored Data
2014-05-08	PPtree	Projection pursuit classification tree
2014-05-08	rbundler	Rbundler manages an application's dependencies systematically and repeatedly
2014-05-07	CALIBERrfimpute	Multiple imputation using MICE and Random Forest
2014-05-07	freestats	Statistical algorithms used in common data mining course
2014-05-07	noncensus	U.S. Census Regional and Demographic Data
2014-05-06	bandit	Functions for simple A/B split test and multi-armed bandit analysis
2014-05-06	FLR	Fuzzy Logic Rule Classifier
2014-05-06	KappaV	Calculates "vectorial Kappa", an index of congruence between patchy mosaics
2014-05-06	tawny.types	Common types for tawny
2014-05-05	truncSP	Semi-parametric estimators of truncated regression models
2014-05-03	sglr	An R package for power and boundary calculations in pre-licensure vaccine trials using a sequential generalized likelihood ratio test
2014-05-02	benchmark	Benchmark Experiments Toolbox
2014-05-02	GeneFeST	Bayesian calculation of gene-specific FST from genomic SNP data
2014-05-02	irtProb	Utilities and Probability Distributions Related to Multidimensional Person Item Response Models
2014-05-02	NominalLogisticBiplot	Biplot representations of categorical data
2014-05-01	MultiCNVDetect	Multiple Copy Number Variation Detection
2014-05-01	nplplot	Plotting linkage and association results
2014-04-30	CMPControl	Control Charts for Conway-Maxwell-Poisson Distribution
2014-04-30	lar	History of labour relations package
2014-04-30	pdfCluster	Cluster analysis via nonparametric density estimation
2014-04-30	SoilR	Models of Soil Organic Matter Decomposition
2014-04-29	bbefkr	Bayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density
2014-04-29	hierNet	A Lasso for Hierarchical Interactions
2014-04-28	EasyMARK	Utility functions for working with mark-recapture data
2014-04-28	mcheatmaps	Multiple matrices heatmap visualization
2014-04-27	plusser	A Google+ Interface for R
2014-04-25	DynClust	Denoising and clustering for dynamical image sequence (2D or 3D)+T
2014-04-25	flux	Flux rate calculation from dynamic closed chamber measurements
2014-04-25	RSvgDevice	An R SVG graphics device
2014-04-24	binhf	Haar-Fisz functions for binomial data
2014-04-24	clusterfly	Explore clustering interactively using R and GGobi
2014-04-24	EvCombR	Evidence Combination in R
2014-04-24	MILC	MIcrosimulation Lung Cancer (MILC) model
2014-04-24	polywog	Bootstrapped Basis Regression with Oracle Model Selection
2014-04-23	classifly	Explore classification models in high dimensions
2014-04-23	meifly	Interactive model exploration using GGobi
2014-04-23	micEconCES	Analysis with the Constant Elasticity of Substitution (CES) function
2014-04-23	SNPassoc	SNPs-based whole genome association studies
2014-04-22	apmsWAPP	Pre- and Postprocessing for AP-MS data analysis based on spectral counts
2014-04-22	crackR	Probabilistic damage tolerance analysis for fatigue cracking of metallic aerospace structures
2014-04-22	kcirt	k-Cube Thurstonian IRT Models
2014-04-22	micEconSNQP	Symmetric Normalized Quadratic Profit Function
2014-04-22	profr	An alternative display for profiling information
2014-04-22	quipu	Summary charts of micro satellite profiles for a set of biological samples
2014-04-22	R2STATS	A GTK GUI for fitting and comparing GLM and GLMM in R
2014-04-21	GSAgm	Gene Set Analysis using the Gamma Method
2014-04-19	RApiSerialize	R API Serialization
2014-04-19	Reol	R interface to the Encyclopedia of Life
2014-04-19	RTextureMetrics	Functions for calculation of texture metrics for Grey Level Co-occurrence Matrices
2014-04-19	rWBclimate	A package for accessing World Bank climate data
2014-04-17	ATmet	Advanced Tools for Metrology
2014-04-17	poisson.glm.mix	Fit high dimensional mixtures of Poisson GLMs
2014-04-16	bigalgebra	BLAS routines for native R matrices and big.matrix objects
2014-04-16	PropCIs	Various confidence interval methods for proportions
2014-04-15	Johnson	Johnson Transformation
2014-04-15	NBPSeq	Negative Binomial Models for RNA-Sequencing Data
2014-04-15	RGIFT	Create quizzes in GIFT Format
2014-04-15	scar	Shape-Constrained Additive Regression: a Maximum Likelihood Approach
2014-04-15	scio	Sparse Column-wise Inverse Operator
2014-04-14	AMORE	A MORE flexible neural network package
2014-04-14	DivE	Diversity Estimator
2014-04-14	LOGICOIL	LOGICOIL: multi-state prediction of coiled-coil oligomeric state
2014-04-13	hydroPSO	Particle Swarm Optimisation, with focus on Environmental Models
2014-04-13	RcppBDT	Rcpp bindings for the Boost Date_Time library
2014-04-12	BootPR	Bootstrap Prediction Intervals and Bias-Corrected Forecasting
2014-04-12	earlywarnings	Early Warning Signals Toolbox for Detecting Critical Transitions in Timeseries
2014-04-12	fastM	Fast Computation of Multivariate M-estimators
2014-04-11	gRapfa	Acyclic Probabilistic Finite Automata
2014-04-11	rvTDT	population control weighted rare-variants TDT
2014-04-10	archetypes	Archetypal Analysis
2014-04-10	ora	Convenient Tools for Working with Oracle Databases
2014-04-09	bit	A class for vectors of 1-bit booleans
2014-04-09	cuttlefish.model	An R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model
2014-04-09	ff	memory-efficient storage of large data on disk and fast access functions
2014-04-09	GHQp	Gauss Hermite Quadrature with pruning
2014-04-09	PBSadmb	ADMB for R Using Scripts or GUI
2014-04-07	disclap	Discrete Laplace Exponential Family
2014-04-07	MMS	Fixed effects Selection in Linear Mixed Models
2014-04-05	acss.data	Data Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method)
2014-04-05	bbemkr	Bayesian bandwidth estimation for multivariate kernel regression with Gaussian error
2014-04-05	isotonic.pen	Penalized Isotonic Regression in one and two dimensions
2014-04-05	nonrandom	Stratification and matching by the propensity score
2014-04-04	EcoHydRology	A community modeling foundation for Eco-Hydrology
2014-04-04	fts	R interface to tslib (a time series library in c++)
2014-04-03	csampling	Functions for Conditional Simulation in Regression-Scale Models
2014-04-03	doRedis	Foreach parallel adapter for the rredis package
2014-04-03	marg	Approximate marginal inference for regression-scale models
2014-04-03	Methplot	Visualize the methylation patterns
2014-04-03	nlreg	Higher Order Inference for Nonlinear Heteroscedastic Models
2014-04-03	pcg	Preconditioned Conjugate Gradient Algorithm for solving Ax=b
2014-04-03	rDVR	The rDVR package allows you to start stop and save a video server from within R
2014-04-03	TrackReconstruction	Reconstruct animal tracks from magnetometer, accelerometer, depth and optional speed data
2014-04-02	lpint	Local polynomial estimators of intensity function or its derivatives
2014-04-01	tosls	Instrumental Variables Two Stage Least Squares estimation
2014-03-31	evdbayes	Bayesian Analysis in Extreme Value Theory
2014-03-31	r2d2	Bivariate (Two-Dimensional) Confidence Region and Frequency Distribution
2014-03-30	partsm	Periodic Autoregressive Time Series Models
2014-03-30	TunePareto	Multi-objective parameter tuning for classifiers
2014-03-28	aCRM	Convenience functions for analytical Customer Relationship Management
2014-03-28	FacPad	Bayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment
2014-03-28	invGauss	Threshold regression that fits the (randomized drift) inverse Gaussian distribution to survival data
2014-03-28	MMMS	Multi-Marker Molecular Signature for Treatment-specific Subgroup Identification
2014-03-28	pdmod	Proximal/distal modeling framework for Pavlovian conditioning phenomena
2014-03-28	polyaAeppli	Implementation of the Polya-Aeppli distribution
2014-03-27	iFad	An integrative factor analysis model for drug-pathway association inference
2014-03-26	Rphylip	An R interface for PHYLIP
2014-03-26	SubLasso	Gene selection using Lasso for Microarray data with user-defined genes fixed in model
2014-03-25	clValid	Validation of Clustering Results
2014-03-25	CMF	Collective matrix factorization
2014-03-25	Devore7	Data sets from Devore's "Prob and Stat for Eng (7th ed)"
2014-03-25	ivfixed	Instrumental fixed effect panel data model
2014-03-24	ccgarch	Conditional Correlation GARCH models
2014-03-24	CCpop	One and two locus GWAS of binary phenotype with case-control-population design
2014-03-24	lsdv	Least square dummy variable regression
2014-03-24	OutlierDC	Outlier Detection using quantile regression for Censored Data
2014-03-22	BiDimRegression	Calculates the bidimensional regression between two 2D configurations
2014-03-22	dna	Differential Network Analysis
2014-03-21	MARSS	Multivariate Autoregressive State-Space Modeling
2014-03-21	PwrGSD	Power in a Group Sequential Design
2014-03-21	Stack	Stylized concatenation of data.frames or ffdfs
2014-03-20	deepnet	deep learning toolkit in R
2014-03-20	Paneldata	Linear models for panel data
2014-03-20	pspearman	Spearman's rank correlation test
2014-03-19	BIPOD	BIPOD (Bayesian Inference for Partially Observed diffusions)
2014-03-19	fontcm	Computer Modern font for use with extrafont package
2014-03-19	PKreport	A reporting pipeline for checking population pharmacokinetic model assumption
2014-03-18	comato	Analysis of Concept Maps
2014-03-17	IPMpack	Builds and analyses Integral Projection Models (IPMs)
2014-03-17	uplift	Uplift Modeling
2014-03-15	sbioPN	sbioPN: Simulation of deterministic and stochastic spatial biochemical reaction networks using Petri Nets
2014-03-15	ssmrob	Robust estimation and inference in sample selection models
2014-03-14	gof	Model-diagnostics based on cumulative residuals
2014-03-14	pensim	Simulation of high-dimensional data and parallelized repeated penalized regression
2014-03-14	qtlnet	Causal Inference of QTL Networks
2014-03-14	ykmeans	K-means using a target variable
2014-03-13	PharmPow	Pharmacometric Power calculations for mixed study designs
2014-03-12	binomlogit	Efficient MCMC for Binomial Logit Models
2014-03-12	itertools	Iterator Tools
2014-03-12	LIStest	Tests of independence based on the Longest Increasing Subsequence
2014-03-12	normtest	Tests for Normality
2014-03-12	plotMCMC	MCMC Diagnostic Plots
2014-03-12	sparsenet	Fit sparse linear regression models via nonconvex optimization
2014-03-11	MEMSS	Data sets from Mixed-effects Models in S
2014-03-11	mlmRev	Examples from Multilevel Modelling Software Review
2014-03-11	SASmixed	Data sets from "SAS System for Mixed Models"
2014-03-10	hqmisc	Miscellaneous convenience functions and dataset
2014-03-10	relax	relax – R Editor for Literate Analysis and lateX
2014-03-10	XML2R	EasieR XML data collection
2014-03-09	BurStFin	Burns Statistics Financial
2014-03-09	gpairs	gpairs: The Generalized Pairs Plot
2014-03-09	regsubseq	Detect and Test Regular Sequences and Subsequences
2014-03-07	CPHshape	Find the maximum likelihood estimator of the shape constrained hazard baseline and the effect parameters in the Cox proportional hazards model
2014-03-07	geneSignatureFinder	A Gene-signatures finder tools
2014-03-07	gptk	Gaussian Processes Tool-Kit
2014-03-07	Jmisc	Julian Miscellaneous Function
2014-03-07	svyPVpack	A package for complex surveys including plausible values
2014-03-06	bdpv	Inference and design for predictive values in binary diagnostic tests
2014-03-06	covreg	A simultaneous regression model for the mean and covariance
2014-03-06	eiwild	Ecological Inference with individual and aggregate data
2014-03-06	flowfield	Forecasts future values of a univariate time series
2014-03-06	mixRasch	Mixture Rasch Models with JMLE
2014-03-06	polySegratio	Simulate and test marker dosage for dominant markers in autopolyploids
2014-03-06	polySegratioMM	Bayesian mixture models for marker dosage in autopolyploids
2014-03-06	rngtools	Utility functions for working with Random Number Generators
2014-03-05	bagRboostR	Ensemble bagging and boosting classifiers
2014-03-05	expectreg	Expectile and Quantile Regression
2014-03-05	FDRreg	False discovery rate regression
2014-03-05	hbim	Hill/Bliss Independence Model for Combination Vaccines
2014-03-05	inarmix	Mixture models for longitudinal count data
2014-03-05	picante	R tools for integrating phylogenies and ecology
2014-03-04	bioPN	Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets
2014-03-04	insol	Solar Radiation
2014-03-04	Table1Heatmap	Table 1 Heatmap
2014-03-03	ICGE	Estimation of number of clusters and identification of atypical units
2014-03-03	simFrame	Simulation framework
2014-03-03	SSsimple	State space models
2014-03-03	svIDE	SciViews GUI API - IDE and code editor functions
2014-03-03	widals	Weighting by Inverse Distance with Adaptive Least Squares for Massive Space-Time Data
2014-03-02	optimbase	R port of the Scilab optimbase module
2014-03-02	partitionMetric	Compute a distance metric between two partitions of a set
2014-03-02	pastecs	Package for Analysis of Space-Time Ecological Series
2014-03-02	svDialogstcltk	SciViews GUI API - Dialog boxes using Tcl/Tk
2014-03-02	svGUI	SciViews GUI API - Functions to manage GUIs
2014-03-02	svHttp	SciViews GUI API - R HTTP server
2014-03-02	svMisc	SciViews GUI API - Miscellaneous functions
2014-03-02	svSocket	SciViews GUI API - R Socket Server
2014-03-02	svTools	SciViews GUI API - Tools (wrapper for packages tools and codetools)
2014-03-02	svUnit	SciViews GUI API - Unit testing
2014-03-02	svWidgets	SciViews GUI API - Widgets & Windows
2014-03-02	zooimage	Analysis of numerical zooplankton images
2014-03-01	aqr	Interface methods to use with an ActiveQuant Master Server
2014-03-01	mcll	Monte Carlo Local Likelihood Estimation
2014-02-28	bPeaks	bPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes
2014-02-28	morgenstemning	Color schemes compatible with red-green color perception difficulties
2014-02-28	rpanel	Simple interactive controls for R using the tcltk library
2014-02-27	GDELTtools	Download, slice, and normalize GDELT data
2014-02-27	panelAR	Estimation of Linear AR(1) Panel Data Models with Cross-Sectional Heteroskedasticity and/or Correlation
2014-02-26	ALKr	Generate Age-Length Keys for fish populations
2014-02-26	pencopula	Flexible Copula Density Estimation with Penalized Hierarchical B-Splines
2014-02-26	rvgtest	Tools for Analyzing Non-Uniform Pseudo-Random Variate Generators
2014-02-26	seas	Seasonal analysis and graphics, especially for climatology
2014-02-26	snp.plotter	snp.plotter
2014-02-25	HMMpa	Analysing accelerometer data using hidden Markov models
2014-02-25	SimuChemPC	Simulation process of 4 selection methods in predicting chemical potent compounds
2014-02-24	fractaldim	Estimation of fractal dimensions
2014-02-24	gridBase	Integration of base and grid graphics
2014-02-24	lmodel2	Model II Regression
2014-02-24	MSwM	Fitting Markov Switching Models
2014-02-24	mvc	Multi-View Clustering
2014-02-24	RegClust	Cluster analysis via regression coefficients
2014-02-24	RYoudaoTranslate	R package provide functions to translate English words into Chinese
2014-02-22	blender	Analyze biotic homogenization of landscapes
2014-02-22	bursts	Markov model for bursty behavior in streams
2014-02-22	hcci	Interval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap)
2014-02-22	plumbr	Mutable and dynamic data models
2014-02-21	arf3DS4	Activated Region Fitting, fMRI data analysis (3D)
2014-02-21	eulerian	eulerian: A package to find eulerian paths from graphs
2014-02-21	lpmodeler	Modeler for linear programs (LP) and mixed integer linear programs (MILP)
2014-02-21	ncdf4.helpers	Helper functions for use with the ncdf4 package
2014-02-21	RDieHarder	R interface to the dieharder RNG test suite
2014-02-21	SPAr	Perform rare variants association analysis based on summation of partition approaches
2014-02-21	zendeskR	Zendesk API Wrapper
2014-02-20	ARTP	Gene and Pathway p-values computed using the Adaptive Rank Truncated Product
2014-02-20	denstrip	Density strips and other methods for compactly illustrating distributions
2014-02-20	diffusionMap	Diffusion map
2014-02-20	lorec	LOw Rand and sparsE Covariance matrix estimation
2014-02-20	mixreg	Functions to fit mixtures of regressions
2014-02-20	OLScurve	OLS growth curve trajectories
2014-02-20	RFreak	R/FrEAK interface
2014-02-19	mGSZ	Gene set analysis based on GSZ-scoring function and asymptotic p-value
2014-02-17	bshazard	Nonparametric Smoothing of the Hazard Function
2014-02-17	edeR	Email Data Extraction Using R
2014-02-17	grppenalty	Concave 1-norm and 2-norm group penalty in linear and logistic regression
2014-02-17	praktikum	Kvantitatiivsete meetodite praktikumi asjad / Functions used in the course "Quantitative methods in behavioural sciences" (SHPH.00.004), University of Tartu
2014-02-17	RcmdrPlugin.pointG	Graphical POINT of view for questionnaire data Rcmdr Plug-In
2014-02-17	turner	Turn vectors and lists of vectors into indexed structures
2014-02-16	DTComPair	Comparison of Binary Diagnostic Tests in a Paired Study Design
2014-02-16	sdtoolkit	Scenario Discovery Tools to Support Robust Decision Making
2014-02-15	CRAC	Cosmology R Analysis Code
2014-02-14	prospectr	Miscellaneous functions for processing and sample selection of vis-NIR diffuse reflectance data
2014-02-14	surface	Fitting Hansen Models to Investigate Convergent Evolution
2014-02-13	rsae	Robust Small Area Estimation
2014-02-13	wrspathrow	Functions for working with Worldwide Reference System (WRS)
2014-02-12	bio.infer	Predict environmental conditions from biological observations
2014-02-12	mcr	Method Comparison Regression
2014-02-12	MLCM	Maximum Likelihood Conjoint Measurement
2014-02-12	QCGWAS	Quality Control of Genome Wide Association Study results
2014-02-12	SAM	Sparse Additive Modelling
2014-02-12	wrspathrowData	Data used by the wrspathrow package
2014-02-11	chromoR	Analysis of chromosomal interactions data (correction, segmentation and comparison)
2014-02-11	dlmodeler	Generalized Dynamic Linear Modeler
2014-02-11	HMMCont	Hidden Markov Model for Continuous Observations Processes
2014-02-11	schwartz97	A package on the Schwartz two-factor commodity model
2014-02-10	FKF	Fast Kalman Filter
2014-02-10	npst	Generalization of Hewitt's Seasonality Test
2014-02-08	phyreg	Implements the Phylogenetic Regression of Grafen (1989)
2014-02-07	cpca	Methods to perform Common Principal Component Analysis (CPCA)
2014-02-07	gpr	A Minimalistic package to apply Gaussian Process in R
2014-02-07	Ruchardet	R package to detect character encoding
2014-02-07	SYNCSA	SYNCSA - Analysis of functional and phylogenetic patterns in metacommunities
2014-02-05	paf	Attributable Fraction Function for Censored Survival Data
2014-02-03	MetABEL	Meta-analysis of genome-wide SNP association results
2014-02-01	vbdm	Variational Bayes Discrete Mixture Model
2014-01-31	EMD	Empirical Mode Decomposition and Hilbert Spectral Analysis
2014-01-31	rgam	Robust Generalized Additive Model
2014-01-31	SBSA	Simplified Bayesian Sensitivity Analysis
2014-01-30	pSI	Specificity Index Statistic
2014-01-29	VoxR	Metrics extraction of trees from T-LiDAR data
2014-01-28	CVcalibration	Estimation of the Calibration Equation with Error-in Observations
2014-01-28	RapidPolygonLookup	Polygon lookup using kd trees
2014-01-27	dualScale	Dual Scaling Analysis of Multiple Choice Data
2014-01-27	ebal	Entropy reweighting to create balanced samples
2014-01-27	MergeGUI	A GUI for Merging Datasets in R
2014-01-27	Synth	Synthetic Control Group Method for Comparative Case Studies
2014-01-26	sqliter	Connection wrapper to SQLite databases
2014-01-25	PEMM	A Penalized EM algorithm incorporating missing-data mechanism
2014-01-24	gconcord	Concord method for Graphical Model Selection
2014-01-24	LSC	Local Statistical Complexity - Automatic Pattern Discovery in Spatio-Temporal Data
2014-01-23	cSFM	Covariate-adjusted Skewed Functional Model (cSFM)
2014-01-23	interval	Weighted Logrank Tests and NPMLE for interval censored data
2014-01-23	jpeg	Read and write JPEG images
2014-01-23	pedantics	Functions to facilitate power and sensitivity analyses for genetic studies of natural populations
2014-01-23	saws	Small-Sample Adjustments for Wald tests Using Sandwich Estimators
2014-01-23	sigclust	Statistical Significance of Clustering
2014-01-22	BayesSingleSub	Computation of Bayes factors for interrupted time-series designs
2014-01-22	Gammareg	classic gamma regression: joint modeling of mean and shape parameters
2014-01-22	psyphy	Functions for analyzing psychophysical data in R
2014-01-22	rateratio.test	Exact rate ratio test
2014-01-21	gvlma	Global Validation of Linear Models Assumptions
2014-01-21	truncnorm	Truncated normal distribution
2014-01-20	HUM	compute HUM value and visualize ROC curves
2014-01-19	blockmatrix	blockmatrix: Tools to solve algebraic systems with partitioned matrices
2014-01-19	IBHM	Approximation using the IBHM method
2014-01-19	ldbounds	Lan-DeMets Method for Group Sequential Boundaries
2014-01-19	mfx	Marginal Effects, Odds Ratios and Incidence Rate Ratios for GLMs
2014-01-19	RTextTools	Automatic Text Classification via Supervised Learning
2014-01-19	simexaft	simexaft
2014-01-18	HBSTM	Hierarchical Bayesian Space-Time models for Gaussian space-time data
2014-01-17	odfWeave	Sweave processing of Open Document Format (ODF) files
2014-01-17	SCORER2	SCORER 2.0: an algorithm for distinguishing parallel dimeric and trimeric coiled-coil sequences
2014-01-17	wpp2008	World Population Prospects 2008
2014-01-16	dfexplore	Explore data.frames by plotting NA and classes of each variable
2014-01-16	multinbmod	Regression analysis of overdispersed correlated count data
2014-01-16	sm	Smoothing methods for nonparametric regression and density estimation
2014-01-15	clustsig	Significant Cluster Analysis
2014-01-15	Funclustering	A package for functional data clustering
2014-01-15	OPDOE	OPtimal Design Of Experiments
2014-01-15	RAtmosphere	Standard Atmospheric profiles
2014-01-14	ICEinfer	Incremental Cost-Effectiveness (ICE) Statistical Inference from Two Unbiased Samples
2014-01-14	iDynoR	R Analysis package for iDynoMiCS Simulation Results
2014-01-14	linkim	Linkage information based genotype imputation method
2014-01-14	RockFab	Rock fabric and strain analysis tools
2014-01-14	RXshrink	Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression
2014-01-13	MF	Mitigated Fraction
2014-01-13	TimeMachine	Time Machine
2014-01-11	DSBayes	Bayesian subgroup analysis in clinical trials
2014-01-10	citbcmst	CIT Breast Cancer Molecular SubTypes Prediction
2014-01-10	citccmst	CIT Colon Cancer Molecular SubTypes Prediction
2014-01-10	jointPm	Risk estimation using the joint probability method
2014-01-10	networkTomography	Tools for network tomography
2014-01-10	plRasch	Log Linear by Linear Association models and Rasch family models by pseudolikelihood estimation
2014-01-10	poLCA	Polytomous variable Latent Class Analysis
2014-01-09	cwm	Cluster Weighted Models by EM algorithm
2014-01-09	dagR	R functions for directed acyclic graphs
2014-01-09	gpmap	Analysing and plotting genotype-phenotype maps
2014-01-08	GRaF	Species distribution modelling using latent Gaussian random fields
2014-01-07	rapportools	Miscellaneous (stats) helper functions with sane defaults for reporting
2014-01-07	smatr	(Standardised) Major Axis Estimation and Testing Routines
2014-01-07	streamR	Access to Twitter Streaming API via R
2014-01-06	robcor	Robust Correlations
2014-01-06	sfa	Stochastic Frontier Analysis
2014-01-06	TeachNet	Fits neural networks to learn about back propagation
2014-01-05	RClimMAWGEN	RClimMAWGEN (R Climate Index Multi-site Auto-regressive Weather GENeretor): a package to generate time series of climate indices from RMAWGEN generations
2014-01-04	DESnowball	Bagging with Distance-based Regression for Differential Gene Expression Analyses
2014-01-04	SWATmodel	A multi-OS implementation of the TAMU SWAT model
2014-01-03	AdaptiveSparsity	Adaptive Sparsity Models
2014-01-03	qrfactor	Simultaneous simulation of Q and R mode factor analyses with Spatial data
2014-01-02	binom	Binomial Confidence Intervals For Several Parameterizations
2014-01-02	BioGeoBEARS	BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts
2014-01-02	FAMT	Factor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data
2014-01-02	PedCNV	An implementation for association analysis with CNV data
2014-01-02	robustgam	Robust Estimation for Generalized Additive Models
2014-01-01	mmm	an R package for analyzing multivariate longitudinal data with multivariate marginal models
2014-01-01	PLRModels	Statistical inference in partial linear regression models
2013-12-31	fitDRC	Fitting Density Ratio Classes
2013-12-31	missForest	Nonparametric Missing Value Imputation using Random Forest
2013-12-31	mmm2	Multivariate marginal models with shared regression parameters
2013-12-31	TiddlyWikiR	Create dynamic reports using a TiddlyWiki template
2013-12-30	dtt	Discrete Trigonometric Transforms
2013-12-30	financial	Solving financial problems in R
2013-12-30	mblm	Median-Based Linear Models
2013-12-30	moonsun	Basic astronomical calculations with R
2013-12-30	seawaveQ	U.S. Geological Survey seawaveQ model
2013-12-28	acm4r	Align-and-Count Method comparisons of RFLP data
2013-12-28	rgabriel	Gabriel Multiple Comparison Test and Plot the Confidence Interval on Barplot
2013-12-27	extfunnel	Additional Funnel Plot Augmentations
2013-12-27	GenABEL	genome-wide SNP association analysis
2013-12-27	GenABEL.data	Package contains data which is used by GenABEL example and test functions
2013-12-27	mlogit	multinomial logit model
2013-12-27	ROC632	Construction of diagnostic or prognostic scoring system and internal validation of its discriminative capacities based on ROC curve and 0.633+ boostrap resampling
2013-12-27	saves	Fast load variables
2013-12-27	SIN	A SINful Approach to Selection of Gaussian Graphical Markov Models
2013-12-26	cpk	Clinical Pharmacokinetics
2013-12-26	mycobacrvR	Integrative immunoinformatics for Mycobacterial diseases in R platform
2013-12-24	evt0	Mean of order p, peaks over random threshold Hill and high quantile estimates
2013-12-24	RcmdrPlugin.sos	Efficiently search the R help pages
2013-12-24	safeBinaryRegression	Safe Binary Regression
2013-12-24	TSTutorial	Fitting and Predict Time Series Interactive Laboratory
2013-12-23	audio	Audio Interface for R
2013-12-23	MigClim	Implementing dispersal into species distribution models
2013-12-23	SHIP	SHrinkage covariance Incorporating Prior knowledge
2013-12-21	pa	Performance Attribution for Equity Portfolios
2013-12-21	pmcgd	pmcgd
2013-12-19	AssotesteR	Statistical Tests for Genetic Association Studies
2013-12-19	BBRecapture	Bayesian Behavioural Capture-Recapture Models
2013-12-19	colortools	Tools for colors in a Hue-Saturation-Value (HSV) color model
2013-12-19	minPtest	Gene region-level testing procedure for SNP data, using the min P test resampling approach
2013-12-18	bvls	The Stark-Parker algorithm for bounded-variable least squares
2013-12-18	cellVolumeDist	Functions to fit cell volume distributions and thereby estimate cell growth rates and division times
2013-12-18	FindMinIC	Find Models with Minimum IC
2013-12-18	HWEBayes	Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing
2013-12-18	scalreg	Scaled sparse linear regression
2013-12-18	VHDClassification	Discrimination/Classification in very high dimension with linear and quadratic rules
2013-12-18	wavelets	A package of functions for computing wavelet filters, wavelet transforms and multiresolution analyses
2013-12-18	ycinterextra	Yield curve or zero-coupon prices interpolation and extrapolation
2013-12-17	g.data	Delayed-Data Packages
2013-12-17	iRefR	iRefIndex Manager
2013-12-17	reportRx	Tools for automatically generating reproducible clinical report
2013-12-16	RobRSVD	Robust Regularized Singular Value Decomposition
2013-12-15	fcd	Fused Community Detection
2013-12-15	lpc	Lassoed principal components for testing significance of features
2013-12-15	MVB	Mutivariate Bernoulli log-linear model
2013-12-15	NetSim	A Social Networks Simulation Tool in R
2013-12-15	svdvisual	SVD visualization tools
2013-12-14	DunnettTests	Software implementation of step-down and step-up Dunnett test procedures
2013-12-14	MiST	Mixed effects Score Test for continuous outcomes
2013-12-13	amei	Adaptive Management of Epidemiological Interventions
2013-12-13	HIV.LifeTables	HIV calibrated model life tables for countries with generalized HIV epidemics
2013-12-13	Kmisc	Kevin Miscellaneous
2013-12-13	logconcens	Maximum likelihood estimation of a log-concave density based on censored data
2013-12-13	Oncotree	Estimating oncogenetic trees
2013-12-13	skda	Sparse (Multicategory) Kernel Discriminant Analysis
2013-12-12	BACCO	Bayesian Analysis of Computer Code Output (BACCO)
2013-12-12	dmt	Dependency Modeling Toolkit
2013-12-12	languageR	Data sets and functions with "Analyzing Linguistic Data: A practical introduction to statistics"
2013-12-12	mleur	Maximum likelihood unit root test
2013-12-12	sealasso	Standard Error Adjusted Adaptive Lasso
2013-12-12	untb	ecological drift under the UNTB
2013-12-11	aidar	Tools for reading AIDA (http://aida.freehep.org/) files into R
2013-12-11	diffractometry	Baseline identification and peak decomposition for x-ray diffractograms
2013-12-11	etable	Easy Table
2013-12-11	ExPosition	Exploratory analysis with the singular value decomposition
2013-12-11	giRaph	The giRaph package for graph representation in R
2013-12-11	grImport	Importing Vector Graphics
2013-12-11	InPosition	Inference Tests for ExPosition
2013-12-11	mathgraph	Directed and undirected graphs
2013-12-11	mlogitBMA	Bayesian Model Averaging for Multinomial Logit Models
2013-12-11	pgs	Precision of Geometric Sampling
2013-12-11	rpartitions	Code for integer partitioning
2013-12-11	smfsb	SMfSB 2e: Stochastic Modelling for Systems Biology, second edition
2013-12-11	SOAR	Memory management in R by delayed assignments
2013-12-11	TExPosition	Two-table ExPosition
2013-12-11	TInPosition	Inference tests for TExPosition
2013-12-10	aylmer	A generalization of Fisher's exact test
2013-12-10	Bessel	Bessel – Bessel Functions Computations and Approximations
2013-12-10	CCM	Correlation classification method (CCM)
2013-12-10	conics	Plot Conics
2013-12-10	CVST	Fast Cross-Validation via Sequential Testing
2013-12-10	fxregime	Exchange Rate Regime Analysis
2013-12-10	iBUGS	An Interface to WinBUGS/OpenBUGS/JAGS by gWidgets
2013-12-10	mlegp	Maximum Likelihood Estimates of Gaussian Processes
2013-12-10	pathmox	Pathmox Approach of Segmentation Trees in Partial Least Squares Path Modeling
2013-12-10	prettyGraphs	publication-quality graphics
2013-12-10	SII	Calculate ANSI S3.5-1997 Speech Intelligibility Index
2013-12-10	sparseLTSEigen	RcppEigen back end for sparse least trimmed squares regression
2013-12-10	tdthap	TDT tests for extended haplotypes
2013-12-09	calibrator	Bayesian calibration of complex computer codes
2013-12-09	DIME	DIME (Differential Identification using Mixture Ensemble)
2013-12-09	vrmlgen	Generate 3D visualizations for data exploration on the web
2013-12-08	approximator	Bayesian prediction of complex computer codes
2013-12-08	discrimARTs	Discrimination of Alternative Reproductive Tactics (ARTs)
2013-12-07	elrm	Exact Logistic Regression via MCMC
2013-12-07	hflights	Flights that departed Houston in 2011
2013-12-07	sortinghat	sortinghat
2013-12-05	Brobdingnag	Very large numbers in R
2013-12-05	DynamicDistribution	Dynamically visualized probability distributions and their moments
2013-12-05	MaXact	Exact max-type Cochran-Armitage trend test(CATT)
2013-12-05	ref	References for R
2013-12-05	Sample.Size	Sample size calculation
2013-12-05	snpStatsWriter	Flexible writing of snpStats objects to flat files
2013-12-04	obs.agree	An R package to assess agreement between observers
2013-12-03	ADM3	An Interpretation of the ADM method - automated detection algorithm
2013-12-03	DEMEtics	Evaluating the genetic differentiation between populations based on Gst and D values
2013-12-03	Interpol.T	Hourly interpolation of multiple temperature daily series
2013-12-03	iplots	iPlots - interactive graphics for R
2013-12-03	png	Read and write PNG images
2013-12-03	RCassandra	R/Cassandra interface
2013-12-02	GrassmannOptim	Grassmann Manifold Optimization
2013-12-02	PoiClaClu	Classification and clustering of sequencing data based on a Poisson model
2013-12-02	superMDS	Implements the supervised multidimensional scaling (superMDS) proposal of Witten and Tibshirani (2011)
2013-12-01	exptest	Tests for Exponentiality
2013-11-29	caper	Comparative Analyses of Phylogenetics and Evolution in R
2013-11-29	cycloids	cycloids
2013-11-28	aml	Adaptive Mixed LASSO
2013-11-28	ergm.userterms	User-specified terms for the statnet suite of packages
2013-11-28	LCFdata	Data sets for package “LMERConvenienceFunctions”
2013-11-27	prognosticROC	Prognostic ROC curves for evaluating the predictive capacity of a binary test
2013-11-26	LICORS	Light Cone Reconstruction of States - Predictive State Estimation From Spatio-Temporal Data
2013-11-25	dils	Data-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links
2013-11-25	frontiles	Partial Frontier Efficiency Analysis
2013-11-25	humanFormat	Human-friendly formatting functions
2013-11-24	boxplotdbl	Double Box Plot for Two-Axes Correlation
2013-11-24	bpca	Biplot of Multivariate Data Based on Principal Components Analysis
2013-11-23	growthmodels	Nonlinear Growth Models
2013-11-22	BayesXsrc	R Package Distribution of the BayesX C++ Sources
2013-11-22	GMMBoost	Likelihood-based Boosting for Generalized mixed models
2013-11-22	msgpackR	A library to serialize or unserialize data in MessagePack format
2013-11-21	BSagri	Statistical methods for safety assessment in agricultural field trials
2013-11-21	lestat	A package for LEarning STATistics
2013-11-21	osmar	OpenStreetMap and R
2013-11-21	PubBias	Performs simulation study to look for publication bias, using a technique described by Ioannidis and Trikalinos; Clin Trials. 2007;4(3):245-53
2013-11-20	magic	create and investigate magic squares
2013-11-19	mlDNA	Machine Learning-based Differential Network Analysis of Transcriptome Data
2013-11-19	somebm	some Brownian motions simulation functions
2013-11-19	VLF	Frequency Matrix Approach for Assessing Very Low Frequency Variants in Sequence Records
2013-11-18	codadiags	Markov chain Monte Carlo burn-in based on "bridge" statistics
2013-11-18	eqs2lavaan	EQS Output Conversion to lavaan Functions
2013-11-18	MetStaT	Statistical metabolomics tools
2013-11-18	rbefdata	BEFdata R package
2013-11-17	vscc	Variable selection for clustering and classification
2013-11-16	grade	Binary Grading functions for R
2013-11-15	DiscriMiner	Tools of the Trade for Discriminant Analysis
2013-11-15	PropScrRand	Propensity score methods for assigning treatment in randomized trials
2013-11-14	maxent	Low-memory Multinomial Logistic Regression with Support for Text Classification
2013-11-14	tester	Tests and checks characteristics of R objects
2013-11-13	diaplt	Beads Summary Plot of Ranges
2013-11-13	HaploSim	Functions to simulate haplotypes
2013-11-13	mreg	Fits regression models when the outcome is partially missing
2013-11-13	Rambo	The Random Subgraph Model
2013-11-12	colorfulVennPlot	Plot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data
2013-11-12	robustfa	An Object Oriented Solution for Robust Factor Analysis
2013-11-12	rtf	Rich Text Format (RTF) Output
2013-11-11	clv	Cluster Validation Techniques
2013-11-11	GenKern	Functions for generating and manipulating binned kernel density estimates
2013-11-11	rGammaGamma	Gamma convolutions for methylation array background correction
2013-11-10	FusedPCA	Community Detection via Fused Principal Component Analysis
2013-11-09	aqfig	Functions to help display air quality model output and monitoring data
2013-11-09	dielectric	Defines some physical constants and dielectric functions commonly used in optics, plasmonics
2013-11-07	localdepth	Local Depth
2013-11-07	pcse	Panel-Corrected Standard Error Estimation in R
2013-11-06	learningr	Data and functions to accompany the book "Learning R"
2013-11-06	Rclusterpp	Linkable C++ clustering
2013-11-06	RGenetics	R packages for genetics research
2013-11-05	comparison	Multivariate likelihood ratio calculation and evaluation
2013-11-05	sspline	Smoothing Splines on the Sphere
2013-11-04	gskat	GEE_KM
2013-11-04	ktsolve	Configurable function for solving families of nonlinear equations
2013-11-04	matie	Measuring Association and Testing Independence Efficiently
2013-11-04	mvShapiroTest	Generalized Shapiro-Wilk test for multivariate normality
2013-11-04	someMTP	Some Multiple Testing Procedures
2013-11-04	termstrc	Zero-coupon Yield Curve Estimation
2013-11-03	pedigree	Pedigree functions
2013-11-02	prinsimp	Finding and plotting simple basis vectors for multivariate data
2013-11-01	PAGI	The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways
2013-11-01	rgcvpack	R Interface for GCVPACK Fortran Package
2013-10-31	ACD	Categorical data analysis with complete or missing responses
2013-10-31	gllm	Generalised log-linear model
2013-10-31	lmf	Functions for estimation and inference of selection in age-structured populations
2013-10-31	MRsurv	A multiplicative-regression model for relative survival
2013-10-31	sExtinct	Calculates the historic date of extinction given a series of sighting events
2013-10-29	cluster.datasets	Cluster Analysis Data Sets
2013-10-28	BayesSAE	Bayesian Analysis of Small Area Estimation
2013-10-27	mar1s	Multiplicative AR(1) with Seasonal Processes
2013-10-25	CARrampsOcl	Reparameterized and marginalized posterior sampling for conditional autoregressive models, OpenCL implementation
2013-10-25	DCL	Claims Reserving under the Double Chain Ladder Model
2013-10-25	dgof	Discrete Goodness-of-Fit Tests
2013-10-25	kmconfband	Kaplan-Meier Simultaneous Confidence Band for the Survivor Function
2013-10-25	SPARQL	SPARQL client
2013-10-24	BASIX	BASIX: An efficient C/C++ toolset for R
2013-10-24	mcgibbsit	Warnes and Raftery's MCGibbsit MCMC diagnostic
2013-10-23	fbRanks	Association Football (Soccer) Ranking via Poisson Regression
2013-10-23	globalGSA	Global Gene-Set Analysis for Association Studies
2013-10-23	MFHD	Multivariate Functional Halfspace Depth
2013-10-22	HDtweedie	The Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm
2013-10-22	Rmisc	Rmisc: Ryan Miscellaneous
2013-10-22	smart	Sparse Multivariate Analysis via Rank Transformation
2013-10-22	snapshot	Gadget N-body cosmological simulation code snapshot I/O utilities
2013-10-22	sphereplot	Spherical plotting
2013-10-21	lomb	Lomb-Scargle Periodogram
2013-10-21	mQTL	Metabolomic Quantitative Trait Locus Mapping
2013-10-19	hdrcde	Highest density regions and conditional density estimation
2013-10-17	OIsurv	Survival analysis supplement to OpenIntro guide
2013-10-17	RTConnect	Tools for analyzing sales report files of iTunes Connect
2013-10-16	DAAGxtras	Data Sets and Functions, supplementary to DAAG
2013-10-16	NormalGamma	Normal-gamma convolution model
2013-10-15	cvq2	Calculate the predictive squared correlation coefficient
2013-10-15	zoom	A spatial data visualization tool
2013-10-14	costat	Time series costationarity determination
2013-10-13	Correlplot	A collection of functions for graphing correlation matrices
2013-10-13	shinyRGL	Shiny Wrappers for RGL
2013-10-12	cpa	Confirmatory Path Analysis through the d-sep tests
2013-10-12	mcGlobaloptim	Global optimization using Monte Carlo and Quasi Monte Carlo simulation
2013-10-12	rsig	Robust Signature Selection for Survival Outcomes
2013-10-11	GlobalDeviance	Global Deviance Permutation Tests
2013-10-11	MRwarping	Multiresolution time warping for functional data
2013-10-11	OptHedging	Estimation of value and hedging strategy of call and put options
2013-10-09	binMto	Asymptotic simultaneous confidence intervals for many-to-one comparisons of proportions
2013-10-09	ScrabbleScore	Calculates Scrabble score for strings
2013-10-08	bmem	Mediation analysis with missing data using bootstrap
2013-10-08	caroline	A Collection of Database, Data Structure, Visualization, and Utility Functions for R
2013-10-07	censNID	censored NID samples
2013-10-07	migration.indices	Migration indices
2013-10-04	kitagawa	Spectral response of water wells to harmonic strain and pressure
2013-10-04	TDD	Time-Domain Deconvolution of Seismometer Response
2013-10-03	HEAT	Health Effects of Air Pollution and Temperature (HEAT)
2013-10-03	riv	Robust instrumental variables estimator
2013-10-01	kulife	Datasets and functions from the (now non-existing) Faculty of Life Sciences, University of Copenhagen
2013-10-01	PsumtSim	Simulations of grouped responses relative to baseline
2013-09-30	AUC	Threshold independent performance measures for probabilistic classifiers
2013-09-30	LCA	Localised Co-Dependency Analysis
2013-09-30	ParentOffspring	Conduct the Parent-Offspring Test Using Monomorphic SNP Markers
2013-09-30	plan	Tools for project planning
2013-09-30	topsis	TOPSIS method for multiple-criteria decision making (MCDM)
2013-09-29	coloc	Colocalisation tests of two genetic traits
2013-09-29	elliplot	Ellipse Summary Plot of Quantiles
2013-09-27	BAYSTAR	On Bayesian analysis of Threshold autoregressive model (BAYSTAR)
2013-09-27	FitARMA	FitARMA: Fit ARMA or ARIMA using fast MLE algorithm
2013-09-26	ssvd	Sparse SVD
2013-09-25	SubCultCon	Maximum-Likelihood Cultural Consensus Analysis with Sub-Cultures
2013-09-24	NPHMC	Sample Size Calculation for the Proportional Hazards Mixture Cure Model
2013-09-23	animalTrack	Animal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data
2013-09-23	EffectsRelBaseline	Test changes of a grouped response relative to baseline
2013-09-23	hzar	Hybrid Zone Analysis using R
2013-09-23	LSMonteCarlo	American options pricing with Least Squares Monte Carlo method
2013-09-23	SAMURAI	Sensitivity Analysis of a Meta-analysis with Unpublished but Registered Analytical Investigations
2013-09-22	AtelieR	A GTK GUI for teaching basic concepts in statistical inference, and doing elementary bayesian tests
2013-09-22	lazy	Lazy Learning for Local Regression
2013-09-21	CrypticIBDcheck	Identifying cryptic relatedness in genetic association studies
2013-09-21	dataQualityR	Performs variable level data quality checks and generates summary statistics
2013-09-20	svapls	Surrogate variable analysis using partial least squares in a gene expression study
2013-09-19	prLogistic	Estimation of Prevalence Ratios using Logistic Models
2013-09-19	qtlhot	Inference for QTL Hotspots
2013-09-19	zyp	Zhang + Yue-Pilon trends package
2013-09-18	Dodge	Functions for Acceptance Sampling Ideas originated by H.F. Dodge
2013-09-17	GABi	Framework for Generalized Subspace Pattern Mining
2013-09-16	R4dfp	4dfp MRI Image Read and Write Routines
2013-09-16	SMCRM	Data Sets for Statistical Methods in Customer Relationship Management by Kumar and Petersen (2012)
2013-09-16	speccalt	Alternative spectral clustering, with automatic estimation of k
2013-09-16	yhat	Interpreting Regression Effects
2013-09-15	forensim	Statistical tools for the interpretation of forensic DNA mixtures
2013-09-15	GPCSIV	GPCSIV, Generalized Principal Component of Symbolic Interval variables
2013-09-14	EILA	Efficient Inference of Local Ancestry
2013-09-14	RcmdrPlugin.qual	Rcmdr plugin for quality control course
2013-09-14	RobRex	Optimally robust influence curves for regression and scale
2013-09-14	ROptRegTS	Optimally robust estimation for regression-type models
2013-09-13	Daim	Diagnostic accuracy of classification models
2013-09-13	EcoTroph	EcoTroph R package
2013-09-13	RobLoxBioC	Infinitesimally robust estimators for preprocessing omics data
2013-09-13	ROptEstOld	Optimally robust estimation - old version
2013-09-12	logcondens.mode	Compute MLE of Log-Concave Density on R with Fixed Mode, and Perform Inference for the Mode
2013-09-12	MLRMPA	A package for Multilinear Regression Model Population Analysis
2013-09-12	phalen	Phalen Algorithms and Functions
2013-09-11	pastis	Phylogenetic Assembly with Soft Taxonomic Inferences
2013-09-11	relaimpo	Relative importance of regressors in linear models
2013-09-10	calibrate	Calibration of Scatterplot and Biplot Axes
2013-09-10	FREQ	FREQ: Estimate population size from capture frequencies
2013-09-10	smdata	Data to accompany Smithson & Merkle, 2013
2013-09-09	camel	Calibrated Machine Learning
2013-09-09	DendSer	Dendrogram seriation: ordering for visualisation
2013-09-08	RMongo	MongoDB Client for R
2013-09-08	ttwa	Travel To Work Area
2013-09-07	ALSCPC	Accelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form
2013-09-05	CommonTrend	Extract and plot common trends from a cointegration system. Calculate P-value for Johansen Statistics
2013-09-05	G1DBN	A package performing Dynamic Bayesian Network inference
2013-09-04	tiff	Read and write TIFF images
2013-09-03	expoTree	Calculate density dependent likelihood of a phylogenetic tree
2013-09-03	genetics	Population Genetics
2013-09-03	inlinedocs	Convert inline comments to documentation
2013-09-03	RFGLS	Rapid Feasible Generalized Least Squares
2013-09-03	sparc	Semiparametric Generalized Linear Models
2013-09-02	modeltools	Tools and Classes for Statistical Models
2013-09-02	scrime	Analysis of High-Dimensional Categorical Data such as SNP Data
2013-09-02	tabplotd3	Tabplotd3, interactive inspection of large data
2013-08-30	fExpressCertificates	fExpressCertificates - Structured Products Valuation for ExpressCertificates/Autocallables
2013-08-30	genMOSSplus	Application of MOSS algorithm to genome-wide association study (GWAS)
2013-08-29	automap	Automatic interpolation package
2013-08-28	RStorm	Simulate and Develop Streaming Processing in [R]
2013-08-27	VaRES	Computes value at risk and expected shortfall for over 100 parametric distributions
2013-08-26	dbEmpLikeGOF	Goodness-of-fit and two sample comparison tests using sample entropy
2013-08-26	epoc	EPoC (Endogenous Perturbation analysis of Cancer)
2013-08-24	soilprofile	A package to consistently represent soil properties along a soil profile
2013-08-23	corTools	Tools for processing data after a Genome Wide Association Study
2013-08-23	RcmdrPlugin.sampling	Tools for sampling in Official Statistical Surveys
2013-08-23	rtematres	The rtematres API package
2013-08-23	tlemix	Trimmed Maximum Likelihood Estimation
2013-08-22	fds	Functional data sets
2013-08-22	Rjpstatdb	R interface of the Gateway to Advanced and User-friendly Statistics Service
2013-08-22	ssfit	Fitting of parametric models using summary statistics
2013-08-21	intamapInteractive	procedures for automated interpolation - methods only to be used interactively, not included in intamap package
2013-08-21	kmlcov	Clustering longitudinal data using the likelihood as a metric of distance
2013-08-21	RepeatedHighDim	Global tests for expression data of high-dimensional sets of molecular features
2013-08-21	Rserve	Binary R server
2013-08-21	SOLOMON	Parentage analysis
2013-08-21	specificity	Specificity of personality trait-outcome (or trait-trait) associations
2013-08-21	spls	Sparse Partial Least Squares (SPLS) Regression and Classification
2013-08-20	CellularAutomaton	One-Dimensional Cellular Automata
2013-08-20	phenmod	Auxiliary functions for phenological data processing, modelling and result handling
2013-08-20	SEchart	SEchart
2013-08-20	WDI	World Development Indicators (World Bank)
2013-08-19	protiq	Protein (identification and) quantification based on peptide evidence
2013-08-19	SynchWave	Synchrosqueezed Wavelet Transform
2013-08-19	vwr	Useful functions for visual word recognition research
2013-08-17	bitops	Bitwise Operations
2013-08-17	condGEE	Parameter estimation in conditional GEE for recurrent event gap times
2013-08-17	profileModel	Tools for profiling inference functions for various model classes
2013-08-16	blm	Binomial linear and linear-expit regression
2013-08-16	CNVassocData	Example data sets for association analysis of CNV data
2013-08-16	JOP	Joint Optimization Plot
2013-08-16	PCS	Calculate the probability of correct selection (PCS)
2013-08-16	relaxnet	Relaxation of glmnet models (as in relaxed lasso, Meinshausen 2007)
2013-08-15	conjoint	Conjoint analysis package
2013-08-14	covTest	Computes covariance test for adaptive linear modelling
2013-08-14	IntLik	Numerical Integration for Integrated Likelihood
2013-08-13	EasyHTMLReport	EasyHTMLReport
2013-08-13	ES	Edge Selection
2013-08-13	PAS	Polygenic Analysis System (PAS)
2013-08-13	RFinanceYJ	RFinanceYJ
2013-08-12	rLindo	R Interface to LINDO API
2013-08-12	SpatioTemporal	Spatio-Temporal Model Estimation
2013-08-09	mallet	A wrapper around the Java machine learning tool MALLET
2013-08-08	DMwR	Functions and data for "Data Mining with R"
2013-08-08	gb	Generalize Lambda Distribution and Generalized Bootstrapping
2013-08-08	miRada	MicroRNA Microarray Data Analysis
2013-08-08	spt	Sierpinski Pedal Triangle
2013-08-04	CompLognormal	Functions for actuarial scientists
2013-08-04	lmeSplines	Add smoothing spline modelling capability to nlme
2013-08-04	nlmeU	Datasets and utility functions enhancing functionality of nlme package
2013-08-03	tipom	Automated measure-based classification for flint tools
2013-08-02	AMGET	Post-processing tool for ADAPT 5
2013-08-02	dfcrm	Dose-finding by the continual reassessment method
2013-08-02	ltsbase	Ridge and Liu Estimates based on LTS (Least Trimmed Squares) Method
2013-08-02	sme	Smoothing-splines Mixed-effects Models
2013-08-02	timesboot	Bootstrap computations for time series objects
2013-08-01	compactr	Creates empty plots with compact axis notation
2013-08-01	rbmn	Handling Linear Gaussian Bayesian Networks
2013-07-31	acopula	Modelling dependence with multivariate Archimax (or any user-defined continuous) copulas
2013-07-31	FNN	Fast Nearest Neighbor Search Algorithms and Applications
2013-07-31	gPCA	Batch Effect Detection via Guided Principal Components Analysis
2013-07-31	needy	needy
2013-07-31	SparseGrid	Sparse grid integration in R
2013-07-30	COBRA	Nonlinear Aggregation of Predictors
2013-07-30	Lambda4	Collection of Internal Consistency Reliability Coefficients
2013-07-29	pathdiagram	Basic functions for drawing path diagrams
2013-07-29	robeth	R functions for robust statistics
2013-07-29	SimultAnR	Correspondence and Simultaneous Analysis
2013-07-29	widenet	Penalized Regression with Polynomial Basis Expansions
2013-07-28	MPINet	The package can implement the network-based metabolite pathway identification of pathways
2013-07-28	pwt	Penn World Table (Versions 5.6, 6.x, 7.x)
2013-07-28	Rz	GUI Tool for Data Management like SPSS or Stata
2013-07-27	eigenprcomp	Computes confidence intervals for principal components
2013-07-25	AnDE	An extended Bayesian Learning Technique developed by Dr. Geoff Webb
2013-07-24	hint	Tools for hypothesis testing based on Hypergeometric Intersection distributions
2013-07-24	RxCEcolInf	R x C Ecological Inference With Optional Incorporation of Survey Information
2013-07-23	neuroblastoma	Neuroblastoma copy number profiles
2013-07-22	somplot	Visualisation of hexagonal Kohonen maps
2013-07-22	vars	VAR Modelling
2013-07-22	wordmatch	Matches words in one file with words in another file
2013-07-21	mondate	Keep track of dates in terms of months
2013-07-21	suRtex	LaTeX descriptive statistic reporting for survey data
2013-07-19	BsMD	Bayes Screening and Model Discrimination
2013-07-18	bride	Brier score decomposition of probabilistic forecasts for binary events
2013-07-17	maRketSim	Market simulator for R
2013-07-16	LogrankA	Logrank Test for Aggregated Survival Data
2013-07-16	QSARdata	Quantitative Structure Activity Relationship (QSAR) Data Sets
2013-07-15	straweib	Stratified Weibull Regression Model
2013-07-14	gpk	100 Data Sets for Statistics Education
2013-07-13	phyloclim	Integrating Phylogenetics and Climatic Niche Modeling
2013-07-12	desire	Desirability functions in R
2013-07-12	icaOcularCorrection	Independent Components Analysis (ICA) based artifact correction
2013-07-12	LS2W	Locally stationary two-dimensional wavelet process estimation scheme
2013-07-12	PROFANCY	The package can prioritize candidate disease metabolites based on global functional relationships between metabolites in the context of metabolic pathways
2013-07-11	DistatisR	DiSTATIS Three Way Metric Multidimensional Scaling
2013-07-11	optBiomarker	Estimation of optimal number of biomarkers for two-group microarray based classifications at a given error tolerance level for various classification rules
2013-07-11	switchnpreg	Switching nonparametric regression models for a single curve and functional data
2013-07-10	MDM	Multinomial Diversity Model
2013-07-09	portfolioSim	Framework for simulating equity portfolio strategies
2013-07-09	VDA	VDA
2013-07-06	sGPCA	Sparse Generalized Principal Component Analysis
2013-07-06	smoothie	Two-dimensional Field Smoothing
2013-07-04	ExactCIdiff	Inductive Confidence Intervals for the difference between two proportions
2013-07-03	SNPtools	Accessing, subsetting and plotting mouse SNPs
2013-07-02	clusterGenomics	Identifying clusters in genomics data by recursive partitioning
2013-07-02	flexclust	Flexible Cluster Algorithms
2013-07-02	retimes	Reaction Time Analysis
2013-07-01	DTK	Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
2013-07-01	pathClass	Classification using biological pathways as prior knowledge
2013-06-28	FField	Force field simulation for a set of points
2013-06-28	FisherEM	The Fisher-EM algorithm
2013-06-28	loglognorm	Double log normal distribution functions
2013-06-28	r2dRue	2d Rain Use Efficience model
2013-06-27	b6e6rl	Adaptive differential evolution, b6e6rl variant
2013-06-27	itree	Tools for classification and regression trees, with an emphasis on interpretability
2013-06-27	PCICt	Implementation of POSIXct work-alike for 365 and 360 day calendars
2013-06-25	LICurvature	Sensitivity Analysis for Case Weight in Normal Linear Regression
2013-06-24	tsModel	Time Series Modeling for Air Pollution and Health
2013-06-23	crrSC	Competing risks regression for Stratified and Clustered data
2013-06-21	ArrayBin	Binarization of numeric data arrays
2013-06-19	gwrr	Fits geographically weighted regression models with diagnostic tools
2013-06-19	MConjoint	Conjoint Analysis through Averaging of Multiple Analyses
2013-06-19	SmithWilsonYieldCurve	Smith-Wilson Yield Curve Construction
2013-06-18	aods3	Analysis of Overdispersed Data using S3 methods
2013-06-18	glmlep	Fit GLM with LEP-based penalized maximum likelihood
2013-06-18	rsgcc	Gini methodology-based correlation and clustering analysis of microarray and RNA-Seq gene expression data
2013-06-18	ZeBook	ZeBook Working with dynamic models for agriculture and environment
2013-06-17	Bolstad2	Bolstad functions
2013-06-17	MCPerm	A Monte Carlo permutation method for multiple test correlation
2013-06-17	twiddler	Interactive manipulation of R expressions
2013-06-16	JointRegBC	Joint Modelling of Mixed Correlated Binary and Continuous Responses : A Latent Variable Approach
2013-06-16	nsga2R	Elitist Non-dominated Sorting Genetic Algorithm based on R
2013-06-15	MExPosition	Multi-table ExPosition
2013-06-13	depthTools	Depth Tools Package
2013-06-13	govStatJPN	functions to get public survey data in Japan
2013-06-13	PDSCE	Positive definite sparse covariance estimators
2013-06-13	RcmdrPlugin.depthTools	R commander Depth Tools Plug-In
2013-06-12	SoDA	Functions and Examples for "Software for Data Analysis"
2013-06-11	tbdiag	Functions for tuberculosis diagnostics research
2013-06-10	cabootcrs	Bootstrap Confidence Regions for Correspondence Analysis
2013-06-10	covLCA	Latent Class Models with Covariate Effects on Underlying and Measured Variables
2013-06-10	sparktex	Generate LaTeX sparklines in R
2013-06-08	lshorth	The Length of the Shorth
2013-06-08	pbs	Periodic B Splines
2013-06-06	IUPS	Incorporating Uncertainties in Propensity Scores
2013-06-06	LVMMCOR	A Latent Variable Model for Mixed Continuous and Ordinal Responses
2013-06-05	batch	Batching Routines in Parallel and Passing Command-Line Arguments to R
2013-06-04	FGalgorithm	Flury and Gautschi algorithms
2013-06-04	mopsocd	MOPSOCD: Multi-objective Particle Swarm Optimization with Crowding Distance
2013-06-04	NPMVCP	Nonparametric Multivariate Change Point Model
2013-06-04	RSADBE	Data related to the book "R Statistical Application Development by Example"
2013-06-03	ahaz	Regularization for semiparametric additive hazards regression
2013-06-03	RobustRankAggreg	Methods for robust rank aggregation
2013-06-03	TrialSize	R functions in Chapter 3,4,6,7,9,10,11,12,14,15
2013-05-31	protoclass	Interpretable classification with prototypes
2013-05-29	OneTwoSamples	Deal with one and two (normal) samples
2013-05-28	CoinMinD	Simultaneous Confidence Interval for Multinomial Proportion
2013-05-28	DTMCPack	Suite of functions related to discrete-time discrete-state Markov Chains
2013-05-28	fitTetra	fitTetra is an R package for assigning tetraploid genotype scores
2013-05-28	RVtests	Rare Variant Tests
2013-05-27	compareODM	comparison of medical forms in CDISC ODM format
2013-05-26	ggROC	package for roc curve plot with ggplot2
2013-05-26	McSpatial	Nonparametric spatial data analysis
2013-05-25	profdpm	Profile Dirichlet Process Mixtures
2013-05-24	BSquare	Bayesian Simultaneous Quantile Regression
2013-05-24	lbiassurv	Length-biased correction to survival curve estimation
2013-05-23	InferenceSMR	Inference about the standardized mortality ratio when evaluating the effect of a screening program on survival
2013-05-23	SODC	Optimal Discriminant Clustering(ODC) and Sparse Optimal Discriminant Clustering(SODC)
2013-05-22	cyphid	Cycle and Phase Identification for mastication data
2013-05-22	parallelize.dynamic	Automate parallelization of function calls by means of dynamic code analysis
2013-05-22	trueskill	Implementation the TrueSkill algorithm in R
2013-05-20	pom	POM - Patch Occupancy Models
2013-05-19	pnmtrem	Probit-Normal Marginalized Transition Random Effects Models
2013-05-19	probsvm	probsvm: Class probability estimation for Support Vector Machines
2013-05-18	CfEstimateQuantiles	Estimate quantiles using any order Cornish-Fisher expansion
2013-05-18	SMFI5	R functions and data from Chapter 5 of 'Statistical Methods for Financial Engineering'
2013-05-17	CDLasso	Coordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression
2013-05-16	biglm	bounded memory linear and generalized linear models
2013-05-16	grnn	General regression neural network
2013-05-16	PurBayes	Bayesian Estimation of Tumor Purity and Clonality
2013-05-15	Nozzle.R1	Nozzle Reports
2013-05-15	RDSTK	An R wrapper for the Data Science Toolkit API
2013-05-14	sos4R	An R client for the OGC Sensor Observation Service
2013-05-13	csSAM	csSAM - cell-specific Significance Analysis of Microarrays
2013-05-13	hgam	High-dimensional Additive Modelling
2013-05-11	ergmharris	Local Health Department network data set
2013-05-10	ArDec	Time series autoregressive-based decomposition
2013-05-10	CoxBoost	Cox models by likelihood based boosting for a single survival endpoint or competing risks
2013-05-10	GAMBoost	Generalized linear and additive models by likelihood based boosting
2013-05-09	NHEMOtree	Non-hierarchical evolutionary multi-objective tree learner to perform cost-sensitive classification
2013-05-09	timeline	Timelines for a Grammar of Graphics
2013-05-09	wpp2010	World Population Prospects 2010
2013-05-08	lisrelToR	Import output from LISREL into R
2013-05-07	corrsieve	CorrSieve
2013-05-07	ExpDes	Experimental Designs package
2013-05-07	ExpDes.pt	Pacote Experimental Designs (Portuguese)
2013-05-07	InteractiveIGraph	interactive network analysis and visualization
2013-05-07	pnn	Probabilistic neural networks
2013-05-06	GibbsACOV	Gibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
2013-05-04	HydroMe	R codes for estimating water retention and infiltration model parameters using experimental data
2013-05-03	bnpmr	Bayesian monotonic nonparametric regression
2013-05-03	diffdepprop	Calculates Confidence Intervals for two Dependent Proportions
2013-05-03	iteRates	Parametric rate comparison
2013-05-03	mixsep	Forensic Genetics DNA Mixture Separation
2013-05-02	RAP	Reversal Association Pattern
2013-05-01	RnavGraphImageData	Some image data used in the RnavGraph package demos
2013-04-29	tseriesChaos	Analysis of nonlinear time series
2013-04-28	whisker	{{mustache}} for R, logicless templating
2013-04-27	MicroStrategyR	MicroStrategyR Package
2013-04-26	FuzzyToolkitUoN	Type 1 Fuzzy Logic Toolkit
2013-04-25	dbEmpLikeNorm	Test for joint assessment of normality
2013-04-25	hsmm	Hidden Semi Markov Models
2013-04-25	princurve	Fits a Principal Curve in Arbitrary Dimension
2013-04-25	sendplot	Tool for sending interactive plots with tool-tip content
2013-04-24	DetSel	A computer program to detect markers responding to selection
2013-04-24	dirmult	Estimation in Dirichlet-Multinomial distribution
2013-04-24	lars	Least Angle Regression, Lasso and Forward Stagewise
2013-04-23	GENEAread	Package For Reading Binary files
2013-04-23	R2G2	Converting R CRAN outputs into Google Earth
2013-04-23	siar	Stable Isotope Analysis in R
2013-04-21	mgraph	Graphing map attributes and non-map variables in R
2013-04-20	cdb	Reading and Writing Constant DataBases
2013-04-20	ibdreg	Regression Methods for IBD Linkage With Covariates
2013-04-20	locfit	Local Regression, Likelihood and Density Estimation
2013-04-19	boussinesq	Analytic Solutions for (ground-water) Boussinesq Equation
2013-04-19	FrF2.catlg128	Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words
2013-04-18	glmdm	R Code for Simulation of GLMDM
2013-04-18	spikeslab	Prediction and variable selection using spike and slab regression
2013-04-17	catspec	Special models for categorical variables
2013-04-17	CheckDigit	Calculate and verify check digits
2013-04-17	decon	Deconvolution Estimation in Measurement Error Models
2013-04-17	GAIPE	Graphical Extension with Accuracy in Parameter Estimation (GAIPE)
2013-04-17	lpridge	Local Polynomial (Ridge) Regression
2013-04-17	mvbutils	Workspace organization, code and documentation editing, package prep and editing, etc
2013-04-17	quadprog	Functions to solve Quadratic Programming Problems
2013-04-16	appell	Compute Appell's F1 hypergeometric function
2013-04-16	FRB	Fast and Robust Bootstrap
2013-04-16	JGL	Performs the Joint Graphical Lasso for sparse inverse covariance estimation on multiple classes
2013-04-16	spacejam	Sparse conditional graph estimation with joint additive models
2013-04-13	DeducerSpatial	Deducer for spatial data analysis
2013-04-12	glmulti	Model selection and multimodel inference made easy
2013-04-12	logging	R logging package
2013-04-12	orderbook	Orderbook visualization/Charting software
2013-04-12	sideChannelAttack	Side Channel Attack
2013-04-10	clinUtiDNA	Clinical Utility of DNA Testing
2013-04-10	deseasonalize	Optimal deseasonalization for geophysical time series using AR fitting
2013-04-09	phcfM	Modelling anthropogenic deforestation
2013-04-09	rbugs	Fusing R and OpenBugs and Beyond
2013-04-08	df2json	Convert a dataframe to JSON
2013-04-08	peperr	Parallelised Estimation of Prediction Error
2013-04-08	survIDINRI	IDI and NRI for comparing competing risk prediction models with censored survival data
2013-04-07	SportsAnalytics	Infrastructure for Sports Analytics
2013-04-05	persiandictionary	English to Persian dictionary
2013-04-05	PlotRegionHighlighter	Creates an envelope that surrounds a set of points plotted in a two dimensional space
2013-04-04	BaySIC	Bayesian Analysis of Significantly Mutated Genes in Cancer
2013-04-03	ncbit	retrieve and build NBCI taxonomic data
2013-04-03	noweb	Noweb system for R
2013-04-03	trioGxE	A data smoothing approach to explore and test gene-environment interaction in case-parent trio data
2013-04-02	ConvCalendar	Converts dates between calendars
2013-04-02	ENmisc	Neuwirth miscellaneous
2013-04-02	infutil	Information Utility
2013-04-02	MLEcens	Computation of the MLE for bivariate (interval) censored data
2013-04-02	SGL	Fit a GLM (or cox model) with a combination of lasso and group lasso regularization
2013-04-02	SPIn	Simulation-efficient Shortest Probability Intervals
2013-04-01	gpclib	General Polygon Clipping Library for R
2013-04-01	optAUC	Optimal Combinations of Diagnostic Tests Based on AUC
2013-03-30	pbatR	P2BAT
2013-03-28	ICE	Iterated Conditional Expectation
2013-03-28	sprsmdl	Sparse modeling toolkit
2013-03-27	farsi	Translate integers into persian
2013-03-27	meteogRam	Tools for plotting meteograms
2013-03-27	severity	Mayo's Post-data Severity Evaluation
2013-03-26	Bayesthresh	Bayesian thresholds mixed-effects models for categorical data
2013-03-26	HI	Simulation from distributions supported by nested hyperplanes
2013-03-25	gaoptim	Genetic Algorithm optimization for real-based and permutation-based problems
2013-03-25	HAP.ROR	Recursive Organizer (ROR)
2013-03-25	hashFunction	A collection of non-cryptographic hash functions
2013-03-25	PMA	Penalized Multivariate Analysis
2013-03-23	crimCV	Group-Based Modelling of Longitudinal Data
2013-03-23	flsa	Path algorithm for the general Fused Lasso Signal Approximator
2013-03-23	hcc	Hidden correlation check
2013-03-22	orientlib	Support for orientation data
2013-03-21	MSeasyTkGUI	MSeasy Tcl/Tk Graphical User Interface
2013-03-20	DATforDCEMRI	Deconvolution Analysis Tool for Dynamic Contrast Enhanced MRI
2013-03-20	MSeasy	Preprocessing of Gas Chromatography-Mass Spectrometry (GC-MS) data
2013-03-20	rCarto	This package builds maps with a full cartographic layout
2013-03-19	AnalyzeFMRI	Functions for analysis of fMRI datasets stored in the ANALYZE or NIFTI format
2013-03-19	BiplotGUI	Interactive Biplots in R
2013-03-19	DeducerExtras	Additional dialogs and functions for Deducer
2013-03-19	tpe	Tree preserving embedding
2013-03-18	crossdes	Construction of Crossover Designs
2013-03-18	cvplogistic	Penalized Logistic Regression Model using Majorization Minimization by Coordinate Descent (MMCD) Algorithm
2013-03-18	marqLevAlg	An algorithm for least-squares curve fitting
2013-03-16	FitAR	Subset AR Model Fitting
2013-03-14	BlockMessage	Creates strings that show a text message in 8 by 8 block letters
2013-03-14	fpp	Data for "Forecasting: principles and practice"
2013-03-14	GriegSmith	Uses Grieg-Smith method on 2 dimentional spatial data
2013-03-14	hsicCCA	Canonical Correlation Analysis based on Kernel Independence Measures
2013-03-13	BayHap	Bayesian analysis of haplotype association using Markov Chain Monte Carlo
2013-03-13	perry	Resampling-based prediction error estimation for regression models
2013-03-12	ber	Batch Effects Removal
2013-03-12	kappaSize	Sample Size Estimation Functions for Studies of Interobserver Agreement
2013-03-11	cosso	Fit Regularized Nonparametric Regression Models Using COSSO Penalty
2013-03-11	patchPlot	Scatterplots of image patches
2013-03-11	semisupKernelPCA	Kernel PCA projection, and semi-supervised variant
2013-03-08	BBMM	Brownian bridge movement model
2013-03-08	EpiEstim	EpiEstim: a package to estimate time varying reproduction numbers from epidemic curves
2013-03-08	nls2	Non-linear regression with brute force
2013-03-07	GESTr	Gene Expression State Transformation
2013-03-07	LDOD	Finding Locally D-optimal optimal designs for some nonlinear and generalized linear models
2013-03-06	IM	Orthogonal Moment Analysis
2013-03-04	bifactorial	Inferences for bi- and trifactorial trial designs
2013-03-04	MAR1	Multivariate Autoregressive Modeling for Analysis of Community Time-Series Data
2013-03-04	StandardizeText	Standardize Text
2013-03-04	survexp.fr	Relative survival, AER and SMR based on French death rates
2013-03-01	AtmRay	Acoustic Traveltime Calculations for 1-D Atmospheric Models
2013-02-28	heatex	Heat exchange calculations during physical activity
2013-02-28	het.test	White's Test for Heteroskedasticity
2013-02-28	MOJOV	Mojo Variants: Rare Variants analysis
2013-02-28	norm	Analysis of multivariate normal datasets with missing values
2013-02-27	HDMD	Statistical Analysis Tools for High Dimension Molecular Data (HDMD)
2013-02-26	estout	Estimates Output
2013-02-26	fso	Fuzzy Set Ordination
2013-02-26	orclus	ORCLUS subspace clustering
2013-02-25	iWeigReg	Improved methods for causal inference and missing data problems
2013-02-25	smcUtils	Utility functions for sequential Monte Carlo
2013-02-25	tsbugs	Create time series BUGS models
2013-02-23	conf.design	Construction of factorial designs
2013-02-22	cheb	Discrete Linear Chebyshev Approximation
2013-02-22	epade	Easy Plots
2013-02-22	MEET	MEET: Motif Elements Estimation Toolkit
2013-02-22	nonparaeff	Nonparametric Methods for Measuring Efficiency and Productivity
2013-02-21	Digiroo2	An application programming interface for generating null models of social contacts based on individuals' space use
2013-02-21	DMR	Delete or Merge Regressors for linear model selection
2013-02-21	hash	Full feature implementation of hash/associated arrays/dictionaries
2013-02-21	RSAP	SAP Netweaver RFC connector for R
2013-02-19	designGG	Computational tool for designing genetical genomics experiments
2013-02-17	audiolyzR	audiolyzR: Give your data a listen
2013-02-17	GetR	GetR: Calculate Guttman error trees in R
2013-02-16	HIest	Hybrid index estimation
2013-02-16	multinomRob	Robust Estimation of Overdispersed Multinomial Regression Models
2013-02-15	Iboot	Iboot: iterated bootstrap tests and confidence sets
2013-02-15	smdc	Document Similarity
2013-02-14	poibin	The Poisson Binomial Distribution
2013-02-14	survC1	C-statistics for risk prediction models with censored survival data
2013-02-11	gensemble	generalized ensemble methods
2013-02-09	bayess	Bayesian Essentials with R
2013-02-09	Compounding	Computing Continuous Distributions
2013-02-09	modiscloud	R tools for processing Level 2 Cloud Mask products from MODIS
2013-02-08	ternvis	Visualisation, verification and calibration of ternary probabilistic forecasts
2013-02-07	beadarrayFilter	Bead filtering for Illumina bead arrays
2013-02-07	debug	MVB's debugger for R
2013-02-07	NestedCohort	Survival Analysis for Cohorts with Missing Covariate Information
2013-02-07	nlsmsn	Fitting nonlinear models with scale mixture of skew-normal distributions
2013-02-07	orddom	Ordinal Dominance Statistics
2013-02-06	ExactPath	Exact solution paths for regularized LASSO regressions with L_1 penalty
2013-02-06	glmpath	L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
2013-02-06	stoichcalc	R Functions for Solving Stoichiometric Equations
2013-02-05	exactLoglinTest	Monte Carlo Exact Tests for Log-linear models
2013-02-05	fractalrock	Generate fractal time series with non-normal returns distribution
2013-02-05	gaussquad	Collection of functions for Gaussian quadrature
2013-02-05	pacbpred	PAC-Bayesian Estimation and Prediction in Sparse Additive Models
2013-02-04	OOmisc	Ozgur-Ozlem Miscellaneous
2013-02-04	orthopolynom	Collection of functions for orthogonal and orthonormal polynomials
2013-02-03	pdist	Partitioned Distance Function
2013-02-03	TimeProjection	Time Projections
2013-01-30	mlearning	Machine learning algorithms with unified interface and confusion matrices
2013-01-30	randomGLM	Random General Linear Model Prediction
2013-01-30	YieldCurve	Modelling and estimation of the yield curve
2013-01-29	DivMelt	HRM Diversity Assay Analysis Tool
2013-01-29	EMT	Exact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate data
2013-01-29	SUE	Subsampling method
2013-01-28	deal	Learning Bayesian Networks with Mixed Variables
2013-01-28	RcmdrPlugin.plotByGroup	Rcmdr plots by group using lattice
2013-01-28	svSweave	SciViews GUI API - Sweave functions
2013-01-26	emme2	Read and Write to an EMME/2 databank
2013-01-26	shapefiles	Read and Write ESRI Shapefiles
2013-01-26	UWHAM	Unbinned weighted histogram analysis method (UWHAM)
2013-01-25	FI	Provide functions for forest inventory calculations
2013-01-25	metatest	Fit and test metaregression models
2013-01-25	misc3d	Miscellaneous 3D Plots
2013-01-25	pln	Polytomous logit-normit (graded logistic) model estimation
2013-01-24	dichromat	Color Schemes for Dichromats
2013-01-24	RcmdrPlugin.SLC	SLC Rcmdr Plug-in
2013-01-24	SLC	Slope and level change
2013-01-21	MM	The multiplicative multinomial distribution
2013-01-21	multipol	multivariate polynomials
2013-01-21	Oarray	Arrays with arbitrary offsets
2013-01-21	RcmdrPlugin.orloca	orloca Rcmdr Plug-in
2013-01-21	semPLS	Structural Equation Modeling Using Partial Least Squares
2013-01-21	stellaR	stellar evolution tracks and isochrones
2013-01-19	adaptsmoFMRI	Adaptive Smoothing of FMRI Data
2013-01-19	currentSurvival	Estimation of CCI and CLFS Functions
2013-01-19	RcppXts	Interface the xts API via Rcpp
2013-01-18	blockrand	Randomization for block random clinical trials
2013-01-18	CVThresh	Level-Dependent Cross-Validation Thresholding
2013-01-18	edcc	Economic Design of Control Charts
2013-01-18	obsSens	Sensitivity analysis for Observational studies
2013-01-18	partitionMap	Partition Maps
2013-01-17	GWG	Calculation of probabilities for inadequate and excessive gestational weight gain
2013-01-16	Bhat	General likelihood exploration
2013-01-16	rms.gof	Root-mean-square goodness-of-fit test for simple null hypothesis
2013-01-16	spacodiR	Spatial and Phylogenetic Analysis of Community Diversity
2013-01-15	SMPracticals	Practicals for use with Davison (2003) Statistical Models
2013-01-14	ESG	ESG - A package for asset projection
2013-01-14	subtype	Cluster analysis to find molecular subtypes and their assessment
2013-01-13	survivalROC	Time-dependent ROC curve estimation from censored survival data
2013-01-12	pass	Prediction and Stability Selection of Tuning Parameters
2013-01-11	gtx	Genetics ToolboX
2013-01-09	BioPhysConnectoR	BioPhysConnectoR
2013-01-09	PROTOLIDAR	PRocess TOol LIdar DAta in R
2013-01-09	RcmdrPlugin.mosaic	Adds menu items to produce mosaic plots and assoc plots to Rcmdr
2013-01-08	hier.part	Hierarchical Partitioning
2013-01-07	displayHTS	displayHTS
2013-01-05	GWASExactHW	Exact Hardy-Weinburg testing for Genome Wide Association Studies
2013-01-05	Stat2Data	Datasets for Stat2
2013-01-04	proteomicdesign	Optimization of a multi-stage proteomic study
2013-01-04	sparcl	Perform sparse hierarchical clustering and sparse k-means clustering
2013-01-03	ldlasso	LD LASSO Regression for SNP Association Study
2013-01-03	partialOR	Partial Odds Ratio
2012-12-31	RcmdrPlugin.SM	Rcmdr Sport Management Plug-In
2012-12-30	RcppClassicExamples	Examples using RcppClassic to interface R and C++
2012-12-30	SPSL	Site Percolation on Square Lattice (SPSL)
2012-12-28	trapezoid	The Trapezoidal Distribution
2012-12-27	fgui	Function GUI
2012-12-25	truncgof	GoF tests allowing for left truncated data
2012-12-24	MedOr	Median Ordering Statistical R package
2012-12-24	MOCCA	Multi-objective optimization for collecting cluster alternatives
2012-12-22	DiversitySampler	Functions for re-sampling a community matrix to compute diversity indices at different sampling levels
2012-12-22	MetaQC	MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis
2012-12-21	imputeMDR	The Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data
2012-12-21	mvnmle	ML estimation for multivariate normal data with missing values
2012-12-21	NSA	Post-normalization of total copy numbers
2012-12-21	ORMDR	ORMDR
2012-12-21	ReCiPa	Redundancy Control in Pathways databases
2012-12-20	hbmem	Hierarchical Bayesian Analysis of Recognition Memory
2012-12-19	nose	nose Package for R
2012-12-17	dblcens	Compute the NPMLE of distribution from doubly censored data
2012-12-16	WordPools	Classical word pools used in studies of learning and memory
2012-12-15	ConjointChecks	A package to check the cancellation axioms of conjoint measurement
2012-12-15	cosmoFns	Functions for cosmological distances, times, luminosities, etc
2012-12-15	LeLogicielR	Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (french)
2012-12-14	MuFiCokriging	Multi-Fidelity Cokriging models
2012-12-12	nutshell	Data for "R in a Nutshell"
2012-12-12	nutshell.audioscrobbler	Audioscrobbler data for "R in a Nutshell"
2012-12-12	nutshell.bbdb	Baseball Database for "R in a Nutshell"
2012-12-12	OptInterim	Optimal Two and Three Stage Designs for Single-Arm and Two-Arm Randomized Controlled Trials with a Long-Term Binary Endpoint
2012-12-11	IndependenceTests	Nonparametric tests of independence between random vectors
2012-12-10	ftnonpar	Features and Strings for Nonparametric Regression
2012-12-10	SampleSizeMeans	Sample size calculations for normal means
2012-12-08	RDIDQ	It perform Quality check on data
2012-12-08	rpartScore	Classification trees for ordinal responses
2012-12-07	MultinomialCI	Simultaneous confidence intervals for multinomial proportions according to the method by Sison and Glaz
2012-12-05	simba	A Collection of functions for similarity analysis of vegetation data
2012-12-04	glmc	Fitting Generalized Linear Models Subject to Constraints
2012-12-04	source.gist	Read R code from a GitHub Gist
2012-12-03	KMsurv	Data sets from Klein and Moeschberger (1997), Survival Analysis
2012-12-03	muma	Metabolomics Univariate and Multivariate Analysis
2012-12-02	brainwaver	Basic wavelet analysis of multivariate time series with a visualisation and parametrisation using graph theory
2012-12-02	emdist	Earth Mover's Distance
2012-12-02	fracdiff	Fractionally differenced ARIMA aka ARFIMA(p,d,q) models
2012-12-01	ffmanova	Fifty-fifty MANOVA
2012-11-30	gcookbook	Data for "R Graphics Cookbook"
2012-11-28	plmm	Partially Linear Mixed Effects Model
2012-11-27	bootRes	Bootstrapped Response and Correlation Functions
2012-11-27	JASPAR	R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
2012-11-27	TFX	R API to TrueFX(tm)
2012-11-26	distfree.cr	Distribution-free confidence region (distfree.cr)
2012-11-26	maptree	Mapping, pruning, and graphing tree models
2012-11-24	pairedCI	Confidence intervals for the ratio of locations and for the ratio of scales of two paired samples
2012-11-24	stepwise	Stepwise detection of recombination breakpoints
2012-11-20	ChoiceModelR	Choice Modeling in R
2012-11-20	stppResid	Perform residual analysis on space-time point process models
2012-11-17	BAEssd	Bayesian Average Error approach to Sample Size Determination
2012-11-15	epibasix	Elementary Epidemiological Functions for Epidemiology and Biostatistics
2012-11-15	PAWL	Implementation of the PAWL algorithm
2012-11-14	bindata	Generation of Artificial Binary Data
2012-11-14	linLIR	linear Likelihood-based Imprecise Regression
2012-11-13	mixcat	Mixed effects cumulative link and logistic regression models
2012-11-13	plsdepot	Partial Least Squares (PLS) Data Analysis Methods
2012-11-13	TSA	Time Series Analysis
2012-11-11	egonet	Tool for ego-centric measures in Social Network Analysis
2012-11-11	nlt	A nondecimated lifting transform for signal denoising
2012-11-09	apTreeshape	Analyses of Phylogenetic Treeshape
2012-11-09	STAR	Spike Train Analysis with R
2012-11-07	ResistorArray	electrical properties of resistor networks
2012-11-07	waved	Wavelet Deconvolution
2012-11-05	homtest	Homogeneity tests for Regional Frequency Analysis
2012-11-05	scagnostics	Compute scagnostics - scatterplot diagnostics
2012-11-03	mlica2	Independent Component Analysis using Maximum Likelihood
2012-11-03	tableplot	Represents tables as semi-graphic displays
2012-11-02	frmqa	The Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance
2012-11-02	IDPmisc	Utilities of Institute of Data Analyses and Process Design (www.idp.zhaw.ch)
2012-11-02	mratios	Inferences for ratios of coefficients in the general linear model
2012-11-02	smirnov	Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book
2012-11-01	argosfilter	Argos locations filter
2012-11-01	fpow	Computing the noncentrality parameter of the noncentral F distribution
2012-11-01	SwissAir	Air Quality Data of Switzerland for one year in 30 min Resolution
2012-11-01	xgobi	Interface to the XGobi and XGvis programs for graphical data analysis
2012-10-31	NORMT3	Evaluates complex erf, erfc, Faddeeva, and density of sum of Gaussian and Student's t
2012-10-31	waveband	Computes credible intervals for Bayesian wavelet shrinkage
2012-10-30	cat	Analysis of categorical-variable datasets with missing values
2012-10-30	cudaBayesregData	Data sets for the examples used in the package "cudaBayesreg"
2012-10-30	degenes	Detection of differentially expressed genes
2012-10-30	ScreenClean	Screen and clean variable selection procedures
2012-10-30	speff2trial	Semiparametric efficient estimation for a two-sample treatment effect
2012-10-29	ACCLMA	ACC & LMA Graph Plotting
2012-10-29	AdaptFit	Adaptive Semiparametic Regression
2012-10-29	Agreement	Statistical Tools for Measuring Agreement
2012-10-29	allan	Automated Large Linear Analysis Node
2012-10-29	AllPossibleSpellings	Computes all of a word's possible spellings
2012-10-29	anapuce	Tools for microarray data analysis
2012-10-29	andrews	Andrews curves
2012-10-29	APSIMBatch	Analysis the output of Apsim software
2012-10-29	audit	Bounds for Accounting Populations
2012-10-29	batade	HTML reports and so on
2012-10-29	bayespref	Hierarchical Bayesian analysis of ecological count data
2012-10-29	BayHaz	R Functions for Bayesian Hazard Rate Estimation
2012-10-29	betafam	Detecting rare variants for quantitative traits using nuclear families
2012-10-29	betaper	Functions to incorporate taxonomic uncertainty on multivariate analyses of ecological data
2012-10-29	bethel	Bethel's algorithm
2012-10-29	BGSIMD	Block Gibbs Sampler with Incomplete Multinomial Distribution
2012-10-29	bimetallic	Power for SNP analyses using silver standard cases
2012-10-29	bivarRIpower	Sample size calculations for bivariate longitudinal data
2012-10-29	biwt	Functions to compute the biweight mean vector and covariance & correlation matrices
2012-10-29	bootspecdens	Testing equality of spectral densities
2012-10-29	CCA	Canonical correlation analysis
2012-10-29	CCP	Significance Tests for Canonical Correlation Analysis (CCA)
2012-10-29	CDFt	Statistical downscaling through CDF-transform
2012-10-29	CircStats	Circular Statistics, from "Topics in circular Statistics" (2001)
2012-10-29	CMC	Cronbach-Mesbah Curve
2012-10-29	colorRamps	Builds color tables
2012-10-29	combinat	combinatorics utilities
2012-10-29	CombMSC	Combined Model Selection Criteria
2012-10-29	compoisson	Conway-Maxwell-Poisson Distribution
2012-10-29	concor	Concordance
2012-10-29	cotrend	Consistant Cotrend Rank Selection
2012-10-29	cumSeg	Change point detection in genomic sequences
2012-10-29	dbConnect	Provides a graphical user interface to connect with databases that use MySQL
2012-10-29	dinamic	DiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors
2012-10-29	discretization	Data preprocessing, discretization for classification
2012-10-29	divagis	Provides tools for quality checks of georeferenced plant species accessions
2012-10-29	dpa	Dynamic Path Approach
2012-10-29	drm	Regression and association models for repeated categorical data
2012-10-29	DTDA	Doubly truncated data analysis
2012-10-29	eigeninv	Generates (dense) matrices that have a given set of eigenvalues
2012-10-29	elec	Collection of functions for statistical election audits
2012-10-29	EngrExpt	Data sets from "Introductory Statistics for Engineering Experimentation"
2012-10-29	eyetracking	Eyetracking Helper Functions
2012-10-29	FactMixtAnalysis	Factor Mixture Analysis with covariates
2012-10-29	fgac	Generalized Archimedean Copula
2012-10-29	fit4NM	NONMEM platform
2012-10-29	Flury	Data Sets from Flury, 1997
2012-10-29	forensic	Statistical Methods in Forensic Genetics
2012-10-29	forward	Forward search
2012-10-29	FourScores	FourScores - A game for two players
2012-10-29	freqMAP	Frequency Moving Average Plots (MAP) of Multinomial Data by a Continuous Covariate
2012-10-29	frt	Full Randomization Test
2012-10-29	FTICRMS	Programs for Analyzing Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Data
2012-10-29	GAD	GAD: Analysis of variance from general principles
2012-10-29	GANPAdata	The GANPA Datasets Package
2012-10-29	GeneF	Package for Generalized F-statistics
2012-10-29	GeneReg	Construct time delay gene regulatory network
2012-10-29	geomapdata	Data for topographic and Geologic Mapping
2012-10-29	gibbs.met	Naive Gibbs Sampling with Metropolis Steps
2012-10-29	globalboosttest	Testing the additional predictive value of high-dimensional data
2012-10-29	gPdtest	Bootstrap goodness-of-fit test for the generalized Pareto distribution
2012-10-29	gwerAM	Controlling the genome-wide type I error rate in association mapping experiments
2012-10-29	HadoopStreaming	Utilities for using R scripts in Hadoop streaming
2012-10-29	HAPim	HapIM
2012-10-29	haplo.ccs	Estimate Haplotype Relative Risks in Case-Control Data
2012-10-29	heatmap.plus	Heatmap with more sensible behavior
2012-10-29	hotspots	Hot spots
2012-10-29	HPbayes	Heligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling
2012-10-29	igraphtosonia	Convert iGraph graps to SoNIA .son files
2012-10-29	Imap	Interactive Mapping
2012-10-29	IMIS	Increamental Mixture Importance Sampling
2012-10-29	ImpactIV	Identifying Causal Effect for Multi-Component Intervention Using Instrumental Variable Method
2012-10-29	InfDim	Infine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories
2012-10-29	insideRODE	insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes
2012-10-29	Interpol	Interpolation of amino acid sequences
2012-10-29	intRegGOF	Integrated Regression Goodness of Fit
2012-10-29	introgress	methods for analyzing introgression between divergent lineages
2012-10-29	ISDA.R	interval symbolic data analysis for R
2012-10-29	isopat	Calculation of isotopic pattern for a given molecular formula
2012-10-29	klin	Linear equations with Kronecker structure
2012-10-29	kzft	Kolmogorov-Zurbenko Fourier Transform and Applications
2012-10-29	lmec	Linear Mixed-Effects Models with Censored Responses
2012-10-29	lqa	Penalized Likelihood Inference for GLMs
2012-10-29	lss	the accelerated failure time model to right censored data based on least-squares principle
2012-10-29	LTR	Perform LTR analysis on microarray data
2012-10-29	MAc	Meta-Analysis with Correlations
2012-10-29	MAclinical	Class prediction based on microarray data and clinical parameters
2012-10-29	mAr	Multivariate AutoRegressive analysis
2012-10-29	MBCluster.Seq	Model-Based Clustering for RNA-seq Data
2012-10-29	MChtest	Monte Carlo hypothesis tests with Sequential Stopping
2012-10-29	Miney	Implementation of the Well-Known Game to Clear Bombs from a Given Field (Matrix)
2012-10-29	minxent	Entropy Optimization Distributions
2012-10-29	mixdist	Finite Mixture Distribution Models
2012-10-29	MKLE	Maximum kernel likelihood estimation
2012-10-29	mpa	CoWords Method
2012-10-29	mvsf	Shapiro-Francia Multivariate Normality Test
2012-10-29	NetCluster	Clustering for networks
2012-10-29	NetData	Network Data for McFarland's SNA R labs
2012-10-29	NightDay	Night and Day Boundary Plot Funtion
2012-10-29	NMFN	Non-negative Matrix Factorization
2012-10-29	normwhn.test	Normality and White Noise Testing
2012-10-29	NPMPM	tertiary probabilistic model in predictive microbiology for use in food manufacture
2012-10-29	nppbib	Nonparametric Partially-Balanced Incomplete Block Design Analysis
2012-10-29	OligoSpecificitySystem	Oligo Specificity System
2012-10-29	omd	filter the molecular descriptors for QSAR
2012-10-29	oncomodel	Maximum likelihood tree models for oncogenesis
2012-10-29	ORDER2PARENT	Estimate parent distributions with data of several order statistics
2012-10-29	ORIClust	Order-restricted Information Criterion-based Clustering Algorithm
2012-10-29	paleoMAS	Paleoecological Analysis
2012-10-29	parfossil	Parallelized functions for palaeoecological and palaeogeographical analysis
2012-10-29	parviol	Parviol
2012-10-29	PASWR	PROBABILITY and STATISTICS WITH R
2012-10-29	Peaks	Peaks
2012-10-29	penalizedSVM	Feature Selection SVM using penalty functions
2012-10-29	pesticides	Analysis of single serving and composite pesticide residue measurements
2012-10-29	pGLS	Generalized Least Square in comparative Phylogenetics
2012-10-29	poistweedie	Poisson-Tweedie exponential family models
2012-10-29	PopGenKit	Useful functions for (batch) file conversion and data resampling in microsatellite datasets
2012-10-29	pps	Functions for PPS sampling
2012-10-29	pragma	Provides a pragma / directive / keyword syntax for R
2012-10-29	PredictiveRegression	Prediction Intervals for Three Basic Statistical Models
2012-10-29	predmixcor	Classification rule based on Bayesian mixture models with feature selection bias corrected
2012-10-29	ProbForecastGOP	Probabilistic weather forecast using the GOP method
2012-10-29	qPCR.CT	qPCR data analysis and plot package
2012-10-29	qtlDesign	Design of QTL experiments
2012-10-29	rdetools	Relevant Dimension Estimation (RDE) in Feature Spaces
2012-10-29	reams	Resampling-Based Adaptive Model Selection
2012-10-29	Records	Record Values and Record Times
2012-10-29	REQS	R/EQS Interface
2012-10-29	RHT	Regularized Hotelling's T-square Test for Pathway (Gene Set) Analysis
2012-10-29	rmeta	Meta-analysis
2012-10-29	ROCwoGS	Non-parametric estimation of ROC curves without Gold Standard Test
2012-10-29	RODM	R interface to Oracle Data Mining
2012-10-29	RPyGeo	ArcGIS Geoprocessing in R via Python
2012-10-29	rSymPy	R interface to SymPy computer algebra system
2012-10-29	sbgcop	Semiparametric Bayesian Gaussian copula estimation and imputation
2012-10-29	sddpack	Semidiscrete Decomposition
2012-10-29	seqCBS	CN Profiling using Sequencing and CBS
2012-10-29	seqRFLP	Simulation and visualization of restriction enzyme cutting pattern from DNA sequences
2012-10-29	session	Functions for interacting with, saving and restoring R sessions
2012-10-29	SiZer	SiZer: Significant Zero Crossings
2012-10-29	skewt	The Skewed Student-t Distribution
2012-10-29	smco	A simple Monte Carlo optimizer using adaptive coordinate sampling
2012-10-29	SMIR	Companion to Statistical Modelling in R
2012-10-29	SMVar	Structural Model for variances
2012-10-29	SNPmaxsel	Maximally selected statistics for SNP data
2012-10-29	spi	Compute SPI index
2012-10-29	sporm	Semiparametric proportional odds rate model
2012-10-29	Stem	Spatio-temporal models in R
2012-10-29	stinepack	Stineman, a consistently well behaved method of interpolation
2012-10-29	symbols	Symbol plots
2012-10-29	TANOVA	Time Course Analysis of Variance for Microarray
2012-10-29	TERAplusB	Test for A+B Traditional Escalation Rule
2012-10-29	tfer	Forensic Glass Transfer Probabilities
2012-10-29	titan	Titration analysis for mass spectrometry data
2012-10-29	trifield	Some basic facilities for ternary fields and plots
2012-10-29	trimcluster	Cluster analysis with trimming
2012-10-29	Tsphere	Transposable Sphering for Large-Scale Inference with Correlated Data
2012-10-29	unbalhaar	Function estimation via Unbalanced Haar wavelets
2012-10-29	UScensus2000cdp	US Census 2000 Designated Places Shapefiles and Additional Demographic Data
2012-10-29	UScensus2000tract	US Census 2000 Tract Level Shapefiles and Additional Demographic Data
2012-10-29	vegetarian	Jost Diversity Measures for Community Data
2012-10-29	VIF	VIF Regression: A Fast Regression Algorithm For Large Data
2012-10-29	violinmplot	Combination of violin plot with mean and standard deviation
2012-10-29	walkscoreAPI	Walk Score and Transit Score API
2012-10-29	wikibooks	Functions and datasets of the german WikiBook "GNU R"
2012-10-29	WilcoxCV	Wilcoxon-based variable selection in cross-validation
2012-10-29	write.snns	Function for exporting data to SNNS pattern files
2012-10-29	wSVM	Weighted SVM with boosting algorithm for improving accuracy
2012-10-29	yacca	Yet Another Canonical Correlation Analysis Package
2012-10-27	nlmeODE	Non-linear mixed-effects modelling in nlme using differential equations
2012-10-25	locpol	Kernel local polynomial regression
2012-10-24	CARE1	Statistical package for population size estimation in capture-recapture models
2012-10-24	dpglasso	Primal Graphical Lasso
2012-10-23	pheno	Auxiliary functions for phenological data analysis
2012-10-23	RGtk2Extras	Data frame editor and dialog making wrapper for RGtk2
2012-10-22	detrendeR	Start the detrendeR Graphical User Interface (GUI)
2012-10-22	landsat	Radiometric and topographic correction of satellite imagery
2012-10-20	MBI	(M)ultiple-site (B)iodiversity (I)ndices Calculator
2012-10-19	TwoCop	Nonparametric test of equality between two copulas
2012-10-17	bmk	MCMC diagnostics package
2012-10-17	linprog	Linear Programming / Optimization
2012-10-16	PhaseType	Inference for Phase-type Distributions
2012-10-15	modeest	Mode Estimation
2012-10-15	npde	Normalised prediction distribution errors for nonlinear mixed-effect models
2012-10-15	Ridit	Ridit Analysis (An extension of the Kruskal-Wallis Test.)
2012-10-11	powerpkg	Power analyses for the affected sib pair and the TDT design
2012-10-10	PoissonSeq	Significance analysis of sequencing data based on a Poisson log linear model
2012-10-08	expoRkit	Expokit in R
2012-10-05	r2stl	r2stl, R package for visualizing data using a 3D printer
2012-10-05	Rivivc	In vitro in vivo correlation linear level A
2012-10-04	FRCC	Fast Regularized Canonical Correlation Analysis
2012-10-04	freeknotsplines	Free-Knot Splines
2012-10-04	rrBlupMethod6	Re-parametrization of RR-BLUP to allow for a fixed residual variance
2012-10-03	rworldxtra	Country boundaries at high resolution
2012-10-01	biasbetareg	Bias correction of the parameter estimates of the beta regression model
2012-10-01	gbRd	Utilities for processing Rd objects and files
2012-10-01	loop	loop decomposition of weighted directed graphs for life cycle analysis, providing flexbile network plotting methods, and analyzing food chain properties in ecology
2012-09-29	astroFns	Astronomy: time and position functions, misc. utilities
2012-09-26	ccChooser	Developing a core collections
2012-09-26	risksetROC	Riskset ROC curve estimation from censored survival data
2012-09-26	smcure	Fit Semiparametric Mixture Cure Models
2012-09-25	emoa	Evolutionary Multiobjective Optimization Algorithms
2012-09-20	binomialcftp	Generates binomial random numbers via the coupling from the past algorithm
2012-09-19	namespace	Provide namespace managment functions not (yet) present in base R
2012-09-19	nparLD	Nonparametric Analysis of Longitudinal Data in Factorial Experiments
2012-09-17	Giza	Constructing panels of population pyramid plots based on lattice
2012-09-15	abcdeFBA	ABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package
2012-09-15	matrixcalc	Collection of functions for matrix calculations
2012-09-14	WCQ	Detection of QTL effects in a small mapping population
2012-09-13	JavaGD	Java Graphics Device
2012-09-13	spcov	Sparse Estimation of a Covariance Matrix
2012-09-11	BayesNI	BayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints
2012-09-11	CePa	Centrality-based pathway enrichment
2012-09-10	hmeasure	The H-measure and other scalar classification performance metrics
2012-09-10	paran	Horn's Test of Principal Components/Factors
2012-09-06	FMStable	Finite Moment Stable Distributions
2012-09-06	NISTnls	Nonlinear least squares examples from NIST
2012-09-05	hbsae	Hierarchical Bayesian Small Area Estimation
2012-09-04	ipdmeta	Tools for subgroup analyses with multiple trial data using aggregate statistics
2012-09-04	miniGUI	tktcl quick and simple function GUI
2012-09-04	mlPhaser	Multi-Locus Haplotype Phasing
2012-09-04	survAUC	Estimators of prediction accuracy for time-to-event data
2012-09-03	PIPS	Predicted Interval Plots
2012-09-02	pso	Particle Swarm Optimization
2012-09-01	twoStageGwasPower	Compute thresholds and power for two-stage gwas
2012-08-31	clusteval	Evaluation of Clustering Algorithms
2012-08-31	NetComp	Network Generation and Comparison
2012-08-30	fmt	Variance estimation of FMT method (Fully Moderated t-statistic)
2012-08-30	rbenchmark	Benchmarking routine for R
2012-08-29	MetabolAnalyze	Probabilistic latent variable models for metabolomic data
2012-08-29	tightClust	Tight Clustering
2012-08-28	playwith	A GUI for interactive plots using GTK+
2012-08-24	regtest	Regression testing
2012-08-24	rindex	Indexing for R
2012-08-24	SearchTrees	Spatial Search Trees
2012-08-23	gaussDiff	Difference measures for multivariate Gaussian probability density functions
2012-08-23	muStat	Prentice Rank Sum Test and McNemar Test
2012-08-23	Simpsons	Detecting Simpson's Paradox
2012-08-23	smoothmest	Smoothed M-estimators for 1-dimensional location
2012-08-22	Rlab	Functions and Datasets Required for ST370 class
2012-08-22	sitools	Format a number to a string with SI prefix
2012-08-21	BigTSP	Top Scoring Pair based methods for classification
2012-08-21	flashClust	Implementation of optimal hierarchical clustering
2012-08-20	quantchem	Quantitative chemical analysis: calibration and evaluation of results
2012-08-19	cudia	CUDIA Cross-level Imputation
2012-08-19	cxxfunplus	extend cxxfunction by saving the dynamic shared objects
2012-08-19	MATTOOLS	Modern Calibration Functions for the Modern Analog Technique (MAT)
2012-08-19	RPCLR	RPCLR (Random-Penalized Conditional Logistic Regression)
2012-08-17	PresenceAbsence	Presence-Absence Model Evaluation
2012-08-17	SAScii	Import ASCII files directly into R using only a SAS input script
2012-08-16	capwire	Estimates population size from non-invasive sampling
2012-08-14	aspace	A collection of functions for estimating centrographic statistics and computational geometries for spatial point patterns
2012-08-14	binGroup	Evaluation and experimental design for binomial group testing
2012-08-14	rHpcc	Interface between HPCC and R
2012-08-13	kerdiest	Nonparametric kernel estimation of the distribution function. Bandwidth selection and estimation of related functions
2012-08-13	SQN	subset quantile normalization
2012-08-13	TauP.R	Earthquake Traveltime Calculations for 1-D Earth Models
2012-08-11	boostSeq	Optimized GWAS cohort subset selection for resequencing studies
2012-08-11	PLIS	Multiplicity control using Pooled LIS statistic
2012-08-10	asympTest	Asymptotic statistic
2012-08-10	IC2	Inequality and Concentration Indices and Curves
2012-08-10	obliqueRF	Oblique Random Forests from Recursive Linear Model Splits
2012-08-09	bvenn	A Simple alternative to proportional Venn diagrams
2012-08-09	BVS	Bayesian Variant Selection: Bayesian Model Uncertainty Techniques for Genetic Association Studies
2012-08-09	dlmap	Detection Localization Mapping for QTL
2012-08-09	FormalSeries	Elementary arithemtic in formal series rings
2012-08-09	modelfree	Model-free estimation of a psychometric function
2012-08-09	p2distance	Welfare's Synthetic Indicator
2012-08-08	fugeR	FUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic
2012-08-07	semGOF	Goodness-of-fit indexes for structural equation models
2012-08-06	notifyR	Send push notifications to your smartphone via pushover.net (ACCOUNT REQUIRED!)
2012-08-05	deamer	Deconvolution density estimation with adaptive methods for a variable prone to measurement error
2012-08-05	proj4	A simple interface to the PROJ.4 cartographic projections library
2012-08-04	R2PPT	Simple R Interface to Microsoft PowerPoint using rcom or RDCOMClient
2012-08-03	crblocks	Categorical Randomized Block Data Analysis
2012-08-02	coexist	Species coexistence modeling and analysis
2012-08-02	crn	Downloads and Builds datasets for Climate Reference Network
2012-08-01	Runiversal	Runiversal - Package for converting R objects to Java variables and XML
2012-07-31	rtape	Manage and manipulate large collections of R objects stored as tape-like files
2012-07-30	HyPhy	Macroevolutionary phylogentic analysis of species trees and gene trees
2012-07-30	rJython	R interface to Python via Jython
2012-07-28	BaylorEdPsych	R Package for Baylor University Educational Psychology Quantitative Courses
2012-07-28	gogarch	Generalized Orthogonal GARCH (GO-GARCH) models
2012-07-26	evir	Extreme Values in R
2012-07-26	mbmdr	Model Based Multifactor Dimensionality Reduction
2012-07-25	dpmixsim	Dirichlet Process Mixture model simulation for clustering and image segmentation
2012-07-25	txtplot	Text based plots
2012-07-23	c3net	Infering large-scale gene networks with C3NET
2012-07-23	cggd	Continuous Generalized Gradient Descent
2012-07-23	drawExpression	Visualising R syntax through graphics
2012-07-23	FindAllRoots	Find all root(s) of the equation and Find root(s) of the equation by dichotomy
2012-07-23	FunCluster	Functional Profiling of Microarray Expression Data
2012-07-23	geneListPie	Profiling a gene list into GOslim or KEGG function pie
2012-07-23	GExMap	A visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data
2012-07-23	mcclust	Process an MCMC Sample of Clusterings
2012-07-23	ODB	Open Document Databases (.odb) management
2012-07-23	parmigene	Parallel Mutual Information estimation for Gene Network reconstruction
2012-07-23	schoolmath	Functions and datasets for math used in school
2012-07-23	spa	Implements The Sequential Predictions Algorithm
2012-07-20	FRACTION	Numeric number into fraction
2012-07-20	obliclus	Cluster-based factor rotation
2012-07-18	elmNN	Implementation of ELM (Extreme Learning Machine ) algorithm for SLFN ( Single Hidden Layer Feedforward Neural Networks )
2012-07-17	bspmma	bspmma: Bayesian Semiparametric Models for Meta-Analysis
2012-07-16	irr	Various Coefficients of Interrater Reliability and Agreement
2012-07-13	knnGarden	Multi-distance based k-Nearest Neighbors
2012-07-12	UScensus2010	US Census 2010 Suite of R Packages
2012-07-11	DeducerSurvival	Add Survival Dialogue to Deducer
2012-07-11	HW.pval	Testing Hardy-Weinberg Equilibrium for Multiallelic Genes
2012-07-11	hypothesestest	Confidence Intervals and Tests of Statistical Hypotheses
2012-07-10	mlbench	Machine Learning Benchmark Problems
2012-07-10	mvtmeta	Multivariate meta-analysis
2012-07-09	extraBinomial	Extra-binomial approach for pooled sequencing data
2012-07-09	SECP	Statistical Estimation of Cluster Parameters (SECP)
2012-07-07	CPE	Concordance Probability Estimates in Survival Analysis
2012-07-06	NLRoot	searching for the root of equation
2012-07-06	WMDB	Discriminant Analysis Methods by Weight Mahalanobis Distance and bayes
2012-07-05	ncg	Computes the noncentral gamma function
2012-07-04	p3state.msm	Analyzing survival data
2012-07-03	myepisodes	MyEpisodes RSS/API functions
2012-07-02	CR	Power Calculation for Weighted Log-Rank Tests in Cure Rate Models
2012-07-02	rCUR	CUR decomposition package
2012-07-02	rda	Shrunken Centroids Regularized Discriminant Analysis
2012-06-28	elasticnet	Elastic-Net for Sparse Estimation and Sparse PCA
2012-06-28	RAD	Fit RAD models to biological data
2012-06-25	gclus	Clustering Graphics
2012-06-21	ezglm	selects significant non-additive interaction between two variables using fast GLM implementation
2012-06-21	psy	Various procedures used in psychometry
2012-06-20	RVideoPoker	Play Video Poker with R
2012-06-19	AMAP.Seq	Compare Gene Expressions from 2-Treatment RNA-Seq Experiments
2012-06-18	tourrGui	A Tour GUI using gWidgets
2012-06-17	crossmatch	The Cross-match Test
2012-06-15	bisectr	Tools to find bad commits with git bisect
2012-06-14	dummies	Create dummy/indicator variables flexibly and efficiently
2012-06-11	caribou	Estimation of caribou abundance based on large scale aggregations monitored by radio telemetry
2012-06-11	extrafontdb	Package for holding the database for the extrafont package
2012-06-09	rrlda	Robust Regularized Linear Discriminant Analysis
2012-06-08	CHCN	Canadian Historical Climate Network
2012-06-07	R330	An R package for Stats 330
2012-06-05	bios2mds	From BIOlogical Sequences to MultiDimensional Scaling
2012-06-05	RIFS	Random Iterated Function System (RIFS)
2012-06-04	MorseGen	Simple raw data generator based on user-specified summary statistics
2012-06-04	Voss	Generic Voss algorithm (random sequential additions)
2012-06-03	SimpleTable	Bayesian Inference and Sensitivity Analysis for Causal Effects from 2 x 2 and 2 x 2 x K Tables in the Presence of Unmeasured Confounding
2012-06-01	hiPOD	hierarchical Pooled Optimal Design
2012-06-01	howmany	A lower bound for the number of correct rejections
2012-06-01	relaxo	Relaxed Lasso
2012-05-31	OIdata	Data sets and supplements (OpenIntro)
2012-05-30	foodweb	visualisation and analysis of food web networks
2012-05-30	intpoint	linear programming solver by the interior point method and graphically (two dimensions)
2012-05-28	disp2D	2D Hausdorff and Simplex Dispersion Orderings
2012-05-28	plus	Penalized Linear Unbiased Selection
2012-05-26	OpenCL	Interface allowing R to use OpenCL
2012-05-25	fgof	Fast Goodness-of-fit Test
2012-05-24	WeightedPortTest	Weighted Portmanteau Tests for Time Series Goodness-of-fit
2012-05-23	qtutils	Miscellaneous Qt-based utilities
2012-05-19	irtrees	Estimation of Tree-Based Item Response Models
2012-05-18	makeProject	Creates an empty package framework for the LCFD format
2012-05-17	msgps	Degrees of freedom of elastic net, adaptive lasso and generalized elastic net
2012-05-17	QUIC	Regularized sparse inverse covariance matrix estimation
2012-05-17	simSummary	Simulation summary
2012-05-16	M3	Reading M3 files
2012-05-16	primer	Functions and data for A Primer of Ecology with R
2012-05-15	ri	ri: R package for performing randomization-based inference for experiments
2012-05-14	cumplyr	Extends ddply to allow calculation of cumulative quantities
2012-05-14	cvTools	Cross-validation tools for regression models
2012-05-13	SortableHTMLTables	Turns a data frame into an HTML file containing a sortable table
2012-05-11	dafs	Data analysis for forensic scientists
2012-05-09	plmDE	Additive partially linear models for differential gene expression analysis
2012-05-08	iCluster	Integrative clustering of multiple genomic data types
2012-05-07	CityPlot	Visualization of structure and contents of a database
2012-05-06	clime	Constrained L1-minimization for Inverse (covariance) Matrix Estimation
2012-05-05	discreteMTP	Multiple testing procedures for discrete test statistics
2012-05-05	tensor	Tensor product of arrays
2012-05-02	lassoshooting	L1 regularized regression (Lasso) solver using the Cyclic Coordinate Descent algorithm aka Lasso Shooting
2012-05-01	condmixt	Conditional Density Estimation with Neural Network Conditional Mixtures
2012-04-28	GUniFrac	Generalized UniFrac distances
2012-04-25	superdiag	R Code for Testing Markov Chain Nonconvergence
2012-04-21	labeledLoop	Labeled Loop
2012-04-17	blighty	United Kingdom coastlines
2012-04-16	GeneCycle	Identification of Periodically Expressed Genes
2012-04-15	mseapca	Metabolite set enrichment analysis for factor loading in principal component analysis
2012-04-13	LIHNPSD	Poisson Subordinated Distribution
2012-04-12	mvnormtest	Normality test for multivariate variables
2012-04-12	reweight	Adjustment of Survey Respondent Weights
2012-04-12	sROC	Nonparametric Smooth ROC Curves for Continuous Data
2012-04-11	mmds	Mixture Model Distance Sampling (mmds)
2012-04-11	waffect	A package to simulate constrained phenotypes under a disease model H1
2012-04-10	aod	Analysis of Overdispersed Data
2012-04-10	BayesDA	Functions and Datasets for the book "Bayesian Data Analysis"
2012-04-10	elec.strat	Functions for election audits using stratified random samples
2012-04-06	race	Racing methods for the selection of the best
2012-04-04	corpora	Statistics and data sets for corpus frequency data
2012-04-03	FinAsym	Classifies implicit trading activity from market quotes and computes the probability of informed trading
2012-04-02	apsrtable	apsrtable model-output formatter for social science
2012-03-31	RcmdrPlugin.epack	Rcmdr plugin for time series
2012-03-30	fossil	Palaeoecological and Palaeogeographical Analysis Tools
2012-03-28	WWGbook	Functions and datasets for WWGbook
2012-03-26	FBN	FISH Based Normalization and Copy Number inference of SNP microarray data
2012-03-26	mlgt	Multi-Locus Geno-Typing
2012-03-24	MHadaptive	General Markov Chain Monte Carlo for Bayesian Inference using adaptive Metropolis-Hastings sampling
2012-03-23	eigenmodel	Semiparametric factor and regression models for symmetric relational data
2012-03-23	filehashSQLite	Simple key-value database using SQLite
2012-03-23	SPA3G	SPA3G: R package for the method of Li and Cui (2012)
2012-03-21	lle	Locally linear embedding
2012-03-21	mvtsplot	Multivariate Time Series Plot
2012-03-21	represent	Determine the representativity of two multidimensional data sets
2012-03-20	QuantPsyc	Quantitative Psychology Tools
2012-03-19	AUCRF	Variable Selection with Random Forest and the Area Under the Curve
2012-03-19	mgpd	mgpd: Functions for multivariate generalized Pareto distribution (MGPD of Type II)
2012-03-19	nnls	The Lawson-Hanson algorithm for non-negative least squares (NNLS)
2012-03-18	LCAextend	Latent Class Analysis (LCA) with familial dependence in extended pedigrees
2012-03-18	PSAgraphics	Propensity Score Analysis Graphics
2012-03-17	DeducerPlugInExample	Deducer Plug-in Example
2012-03-17	DeducerPlugInScaling	Reliability and factor analysis plugin
2012-03-16	bmd	Benchmark dose analysis for dose-response data
2012-03-16	R2wd	Write MS-Word documents from R
2012-03-15	VarSwapPrice	Pricing a variance swap on an equity index
2012-03-14	PKgraph	Model diagnostics for population pharmacokinetic models
2012-03-12	MDR	Detect gene-gene interactions using multifactor dimensionality reduction
2012-03-12	zipcode	U.S. ZIP Code database for geocoding
2012-03-09	qLearn	Estimation and inference for Q-learning
2012-03-08	eqtl	Tools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis
2012-03-07	JPSurv	Methods for population-based cancer survival analysis
2012-03-07	tabuSearch	R based tabu search algorithm
2012-03-05	soobench	Single Objective Optimization Benchmark Functions
2012-03-04	AmericanCallOpt	This package includes pricing function for selected American call options with underlying assets that generate payouts
2012-03-01	CRM	Continual Reassessment Method (CRM) for Phase I Clinical Trials
2012-03-01	curvetest	The package will formally test two curves represented by discrete data sets to be statistically equal or not when the errors of the two curves were assumed either equal or not using the tube formula to calculate the tail probabilities
2012-03-01	rBeta2009	The Beta Random Number and Dirichlet Random Vector Generating Functions
2012-02-29	benchden	28 benchmark densities from Berlinet/Devroye (1994)
2012-02-27	superpc	Supervised principal components
2012-02-21	RMallow	Fit Multi-Modal Mallows' Models to ranking data
2012-02-20	barcode	Barcode distribution plots
2012-02-20	ops	Optimal Power Space Transformation
2012-02-19	perturb	Tools for evaluating collinearity
2012-02-15	gamlss.nl	Fitting non linear parametric GAMLSS models
2012-02-13	dispmod	Dispersion models
2012-02-11	idbg	R debugger
2012-02-10	pairheatmap	A tool for comparing heatmaps
2012-02-06	futile.paradigm	A framework for working in a functional programming paradigm in R
2012-02-05	SCperf	Supply Chain Perform
2012-01-30	Rwinsteps	Running Winsteps in R
2012-01-30	semdiag	Structural equation modeling diagnostics
2012-01-28	geotools	Geo tools
2012-01-28	tlmec	Linear Student-t Mixed-Effects Models with Censored Data
2012-01-27	MIPHENO	Mutant Identification through Probabilistic High throughput Enabled NOrmalization
2012-01-22	SEER2R	reading and writing SEER*STAT data files
2012-01-20	apple	Approximate Path for Penalized Likelihood Estimators
2012-01-18	cytoDiv	Cytometric diversity indices
2012-01-17	ifa	Independent Factor Analysis
2012-01-16	DBGSA	methods of distance-based gene set functional enrichment analysis
2012-01-15	GillespieSSA	Gillespie's Stochastic Simulation Algorithm (SSA)
2012-01-15	PKPDmodels	Pharmacokinetic/pharmacodynamic models
2012-01-13	eiPack	eiPack: Ecological Inference and Higher-Dimension Data Management
2012-01-13	lga	Tools for linear grouping analysis (LGA)
2012-01-13	pgam	Poisson-Gamma Additive Models
2012-01-13	randaes	Random number generator based on AES cipher
2012-01-12	lisp	List-processing à la SRFI-1
2012-01-07	events	Store and manipulate event data
2012-01-07	latticeDensity	Density estimation and nonparametric regression on irregular regions
2012-01-05	hett	Heteroscedastic t-regression
2012-01-05	MImix	Mixture summary method for multiple imputation
2012-01-04	mcbiopi	Matrix Computation Based Identification Of Prime Implicants
2012-01-03	GOGANPA	GO-Functional-Network-based Gene-Set-Analysis
2012-01-03	rpsychi	Statistics for psychiatric research
2011-12-30	cin	Causal Inference for Neuroscience
2011-12-30	wasim	Visualisation and analysis of output files of the hydrological model WASIM
2011-12-28	ADGofTest	Anderson-Darling GoF test
2011-12-28	biglars	Scalable Least-Angle Regression and Lasso
2011-12-23	ktspair	k-Top Scoring Pairs for Microarray Classification
2011-12-20	nFactors	Parallel Analysis and Non Graphical Solutions to the Cattell Scree Test
2011-12-16	spaceExt	Extension of SPACE
2011-12-13	objectProperties	A factory of self-describing properties
2011-12-11	EMC	Evolutionary Monte Carlo (EMC) algorithm
2011-12-11	SMC	Sequential Monte Carlo (SMC) Algorithm
2011-12-09	PairViz	Visualization using Eulerian tours and Hamiltonian decompositions
2011-12-02	supclust	Supervised Clustering of Predictor Variables such as Genes
2011-12-01	OrdMonReg	Compute least squares estimates of one bounded or two ordered isotonic regression curves
2011-11-30	plugdensity	Plug-in Kernel Density Estimation
2011-11-27	tkrgl	TK widget tools for rgl package
2011-11-25	mpm	Multivariate Projection Methods
2011-11-22	Survgini	The Gini concentration test for survival data
2011-11-19	ProfileLikelihood	Profile Likelihood for a Parameter in Commonly Used Statistical Models
2011-11-19	tkrplot	TK Rplot
2011-11-17	liso	Fitting lasso penalised additive isotone models
2011-11-16	PhysicalActivity	Process Physical Activity Accelerometer Data
2011-11-16	SynergizeR	Interface to The Synergizer service for translating between sets of biological identifiers
2011-11-16	SyNet	Inference and Analysis of Sympatry Networks
2011-11-07	RArcInfo	Functions to import data from Arc/Info V7.x binary coverages
2011-11-04	NPsimex	Nonparametric Smoothing for contaminated data using Simulation-Extrapolation
2011-11-03	mail	Sending Email Notifications from R
2011-11-02	EL	Two-sample Empirical Likelihood
2011-11-02	rationalfun	Manipulation of Rational Functions
2011-10-28	objectSignals	objectSignals
2011-10-27	alr3	Data to accompany Applied Linear Regression 3rd edition
2011-10-26	emma	Evolutionary model-based multiresponse approach
2011-10-23	AnnotLists	AnnotLists: A tool to annotate multiple lists from a specific annotation file
2011-10-23	webvis	Create graphics for the web from R
2011-10-20	lspls	LS-PLS Models
2011-10-20	MultEq	Multiple Equivalence Tests and Simultaneous Confidence Intervals
2011-09-29	ascii	Export R objects to several markup languages
2011-09-07	ISOweek	Week of the year and weekday according to ISO 8601
2011-08-28	viopoints	1-D Scatter Plots with Jitter Using Kernel Density Estimates
2011-08-18	ieeeround	Functions to set and get the IEEE rounding mode
2011-08-14	RcmdrPlugin.doex	Rcmdr plugin for Stat 4309 course
2011-08-12	fun	Use R for Fun
2011-08-10	venneuler	Venn and Euler Diagrams
2011-08-08	mxkssd	Efficient mixed-level k-circulant supersaturated designs
2011-08-08	REEMtree	Regression Trees with Random Effects for Longitudinal (Panel) Data
2011-08-05	DAGGER	Consensus genetic maps
2011-08-05	mkssd	Efficient multi-level k-circulant supersaturated designs
2011-07-27	fwdmsa	Forward search for Mokken scale analysis
2011-07-23	CLSOCP	A smoothing Newton method SOCP solver
2011-07-23	minimax	Minimax distribution family
2011-07-19	pixmap	Bitmap Images (“Pixel Maps”)
2011-07-18	B2Z	Bayesian Two-Zone Model
2011-07-06	GPseq	gpseq: Using the generalized Poisson distribution to model sequence read counts from high throughput sequencing experiments
2011-07-06	limitplot	Jitter/CI Plot with Ordered Points Below the Limit of Detection
2011-06-29	enrichvs	Enrichment assessment of virtual screening approaches
2011-06-29	samr	SAM: Significance Analysis of Microarrays
2011-06-15	longmemo	Statistics for Long-Memory Processes (Jan Beran) – Data and Functions
2011-06-15	MetaPCA	MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
2011-05-31	reshapeGUI	A GUI for the reshape2 and plyr packages
2011-05-29	GANPA	Gene Association Network-based Pathway Analysis
2011-05-26	gtcorr	Calculate efficiencies of group testing algorithms with correlated responses
2011-05-18	Kendall	Kendall rank correlation and Mann-Kendall trend test
2011-05-18	pear	Package for Periodic Autoregression Analysis
2011-04-26	MAPLES	Smoothed age profile estimation
2011-04-24	SPECIES	Statistical package for species richness estimation
2011-04-15	lmmlasso	Linear mixed-effects models with Lasso
2011-04-13	brew	Templating Framework for Report Generation
2011-04-06	lcda	Latent Class Discriminant Analysis
2011-03-21	metacor	Meta-analysis of correlation coefficients
2011-03-09	compeir	Event-specific incidence rates for competing risks data
2011-02-24	fpca	Restricted MLE for Functional Principal Components Analysis
2011-02-22	MUCflights	Munich Franz-Josef-Strauss Airport Pattern Analysis
2011-02-21	beadarrayMSV	Analysis of Illumina BeadArray SNP data including MSV markers
2011-02-18	Meth27QC	Meth27QC: sample quality analysis, and sample control analysis
2011-01-29	cmaes	Covariance Matrix Adapting Evolutionary Strategy
2011-01-24	outliers	Tests for outliers
2011-01-23	multxpert	Common Multiple Testing Procedures and Gatekeeping Procedures
2011-01-20	darts	Statistical Tools to Analyze Your Darts Game
2011-01-13	SVMMaj	SVMMaj algorithm
2011-01-11	topmodel	Implementation of the hydrological model TOPMODEL in R
2011-01-03	factualR	thin wrapper for the Factual.com server API
2011-01-03	neariso	Near-Isotonic Regression
2011-01-03	reliaR	Package for some probability distributions
2010-12-16	orQA	Order Restricted Assessment Of Microarray Titration Experiments
2010-12-06	dcv	Conventional Cross-validation statistics for climate-growth model
2010-12-01	tensorA	Advanced tensors arithmetic with named indices
2010-11-08	RMC	Functions for fitting Markov models
2010-10-27	inference	Functions to extract inferential values of a fitted model object
2010-10-26	RunuranGUI	A GUI for the UNU.RAN random variate generators
2010-10-20	fANCOVA	Nonparametric Analysis of Covariance
2010-10-04	rocc	ROC based classification
2010-10-01	genepi	Genetic Epidemiology Design and Inference
2010-09-29	factorQR	Bayesian quantile regression factor models
2010-09-17	laercio	Duncan test, Tukey test and Scott-Knott test
2010-09-02	SMCP	Smoothed minimax concave penalization (SMCP) method for genome-wide association studies
2010-08-23	PET	Simulation and Reconstruction of PET Images
2010-08-08	psychometric	Applied Psychometric Theory
2010-07-29	EnQuireR	A package dedicated to questionnaires
2010-07-29	perm	Exact or Asymptotic permutation tests
2010-07-26	stepPlr	L2 penalized logistic regression with a stepwise variable selection
2010-07-07	mlmmm	ML estimation under multivariate linear mixed models with missing values
2010-06-25	RNCBIEUtilsLibs	EUtils libraries for use in the R environment
2010-06-20	ttutils	Utility functions
2010-05-23	SEL	Semiparametric elicitation
2010-05-07	cgh	Microarray CGH analysis using the Smith-Waterman algorithm
2010-05-07	imprProbEst	Minimum distance estimation in an imprecise probability model
2010-05-01	ProDenICA	Product Density Estimation for ICA using tilted Gaussian density estimates
2010-04-25	BMN	The pseudo-likelihood method for pairwise binary markov networks
2010-04-14	identity	Jacquard Condensed Coefficients of Identity
2010-04-14	space	Sparse PArtial Correlation Estimation
2010-04-13	nws	R functions for NetWorkSpaces and Sleigh
2010-04-12	tpr	Temporal Process Regression
2010-04-06	futile.options	Futile options management
2010-04-05	AIM	AIM: adaptive index model
2010-04-02	endogMNP	R Package for Fitting Multinomial Probit Models with Endogenous Selection
2010-04-02	pmlr	Penalized Multinomial Logistic Regression
2010-03-16	haarfisz	Software to perform Haar Fisz transforms
2010-02-16	ic50	Standardized high-throughput evaluation of cell-based compound screens
2010-02-07	stam	Spatio-Temporal Analysis and Modelling
2010-02-03	scrapeR	Tools for Scraping Data from HTML and XML Documents
2010-02-01	dynamicGraph	dynamicGraph
2010-01-28	fisheyeR	Fisheye and Hyperbolic-space-alike Interactive Visualization Tools in R
2010-01-10	HMM	HMM - Hidden Markov Models
2010-01-04	GSA	Gene set analysis
2009-12-17	SampleSizeProportions	Calculating sample size requirements when estimating the difference between two binomial proportions
2009-12-03	datamap	A system for mapping foreign objects to R variables and environments
2009-11-25	LogitNet	Infer network based on binary arrays using regularized logistic regression
2009-11-22	dvfBm	Discrete variations of a fractional Brownian motion
2009-11-13	corcounts	Generate correlated count random variables
2009-10-27	rela	Item Analysis Package with Standard Errors
2009-10-16	adaptTest	Adaptive two-stage tests
2009-10-12	grouped	Regression Analysis of Grouped and Coarse Data
2009-10-11	packClassic	Toy example of Pack Classic
2009-09-28	EQL	Extended-Quasi-Likelihood-Function (EQL)
2009-09-23	HyperbolicDist	The hyperbolic distribution
2009-08-30	km.ci	Confidence intervals for the Kaplan-Meier estimator
2009-08-08	crantastic	Various R tools for http://crantastic.org/
2009-06-29	PearsonICA	Independent component analysis using score functions from the Pearson system
2009-06-29	spatcounts	Spatial count regression
2009-06-14	svcm	2d and 3d Space-Varying Coefficient Models
2009-06-08	HybridMC	Implementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques
2009-06-07	cghFLasso	Detecting hot spot on CGH array data with fused lasso regression
2009-06-04	bootStepAIC	Bootstrap stepAIC
2009-05-18	odfWeave.survey	Support for odfWeave on the survey package
2009-05-05	luca	Likelihood inference from case-control data Under Covariate Assumptions (LUCA)
2009-05-05	SEMModComp	Model Comparisons for SEM
2009-04-28	mcsm	Functions for Monte Carlo Methods with R
2009-04-15	uniCox	Univarate shrinkage prediction in the Cox model
2009-03-01	clusterRepro	Reproducibility of gene expression clusters
2009-02-25	hdeco	Hierarchical DECOmposition of Entropy for Categorical Map Comparisons
2009-02-25	sac	Semiparametric Analysis of Changepoint
2009-02-24	spe	Stochastic Proximity Embedding
2009-02-01	CreditMetrics	Functions for calculating the CreditMetrics risk model
2009-02-01	Reliability	Functions for estimating parameters in software reliability models
2009-01-30	ETC	Equivalence to control
2008-11-08	foba	greedy variable selection
2008-10-28	kzs	Kolmogorov-Zurbenko Spatial Smoothing and Applications
2008-10-02	expert	Modeling without data using expert opinion
2008-09-28	goalprog	Weighted and lexicographical goal programming and optimization
2008-09-08	pack	Convert values to/from raw vectors
2008-08-13	RM2	Revenue Management and Pricing Package
2008-06-23	SASPECT	Significant AnalysiS of PEptide CounTs
2008-06-09	LDtests	Exact tests for Linkage Disequilibrium and Hardy-Weinberg Equilibrium
2008-05-02	simpleboot	Simple Bootstrap Routines
2008-04-29	poilog	Poisson lognormal and bivariate Poisson lognormal distribution
2007-11-06	mFilter	Miscellaneous time series filters
2007-10-16	fuzzyFDR	Exact calculation of fuzzy decision rules for multiple testing
2006-08-19	powell	Powell's UObyQA algorithm
2006-05-24	allelic	A fast, unbiased and exact allelic exact test
2006-03-30	BayesValidate	BayesValidate Package
2006-03-15	coxrobust	Robust Estimation in Cox Model
2005-10-29	vioplot	Violin plot