BEDMatrix: Extract Genotypes from a PLINK .bed File

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<https://www.cog-genomics.org/plink2>), the whole genome association analysis toolset, without loading the entire file into memory.

Version: 1.6.1
Depends: R (≥ 3.0.0)
Imports: methods, Rcpp (≥ 0.12.1), crochet (≥ 2.2.0)
LinkingTo: Rcpp, BH
Suggests: data.table, LinkedMatrix, testthat
Published: 2019-06-21
Author: Alexander Grueneberg [aut, cre], Gustavo de los Campos [ctb]
Maintainer: Alexander Grueneberg <alexander.grueneberg at googlemail.com>
BugReports: https://github.com/QuantGen/BEDMatrix/issues
License: MIT + file LICENSE
URL: https://github.com/QuantGen/BEDMatrix
NeedsCompilation: yes
Citation: BEDMatrix citation info
Materials: README NEWS
CRAN checks: BEDMatrix results

Downloads:

Reference manual: BEDMatrix.pdf
Package source: BEDMatrix_1.6.1.tar.gz
Windows binaries: r-devel: BEDMatrix_1.6.1.zip, r-release: BEDMatrix_1.6.1.zip, r-oldrel: BEDMatrix_1.6.1.zip
OS X binaries: r-release: BEDMatrix_1.6.1.tgz, r-oldrel: BEDMatrix_1.6.1.tgz
Old sources: BEDMatrix archive

Reverse dependencies:

Reverse depends: BGData
Reverse suggests: genio, groupedSurv, popkin, symDMatrix

Linking:

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